function) domain. TBL gene family has 46 members, two of which (TBR AT5G06700 and TBL3 AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff Wolf Scheible, 2010, personal communication)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25360 AT4G25360 AT5G51640 |
| fragaria_vesca | FvH4_7g28200 FvH4_7g28200 |
| malus_domestica | MD01G1185900.v1.1 MD07G1258100.v1.1 |
| prunus_persica | Prupe.2G282500_v2.0.a1 Prupe.2G282500_v2.0.a1 Prupe.2G282500_v2.0.a1 |
| pyrus_communis | pycom01g19760 pycom07g23110 |
| rosa_chinensis | RchiOBHm_Chr1g0375151 |
| rosa_laevigata | RLG00000026682 |
| rosa_multiflora | Rmu_co8297061.1_g000001 Rmu_co8308331.1_g000001 Rmu_sc0000554.1_g000023 Rmu_sc0002456.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00282970 |
| rosa_rugosa | Rorug01G0388800 |
| rosa_samantha | Rh1AG399400 Rh1BG365100 Rh1CG378000 Rh1DG395800 |
| rosa_wichuraiana | Rw1G035460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1001 |
| Acc36I | ACCTGC | 1 cut(s) | 784 |
| AccI | GTMKAC | 3 cut(s) | 65, 319, 1041 |
| AccII | CGCG | 1 cut(s) | 1364 |
| AciI | CCGC | 3 cut(s) | 41, 1182, 1364 |
| AclWI | GGATC | 3 cut(s) | 548, 960, 1255 |
| AcoI | YGGCCR | 1 cut(s) | 1082 |
| AcsI | RAATTY | 4 cut(s) | 701, 911, 989, 1369 |
| AcuI | CTGAAG | 5 cut(s) | 132, 218, 477, 492, 948 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 638, 876 |
| AflII | CTTAAG | 1 cut(s) | 1151 |
| AgsI | TTSAA | 7 cut(s) | 422, 710, 800, 904, 1051, 1142, 1375 |
| AjiI | CACGTC | 1 cut(s) | 997 |
| AjnI | CCWGG | 5 cut(s) | 556, 615, 1279, 1435, 1528 |
| Alw21I | GWGCWC | 1 cut(s) | 1569 |
| Alw26I | GTCTC | 4 cut(s) | 350, 499, 672, 1572 |
| AlwI | GGATC | 3 cut(s) | 548, 960, 1255 |
| AoxI | GGCC | 4 cut(s) | 732, 1069, 1082, 1493 |
| ApeKI | GCWGC | 1 cut(s) | 38 |
| ApoI | RAATTY | 4 cut(s) | 701, 911, 989, 1369 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 189 |
| AspA2I | CCTAGG | 1 cut(s) | 17 |
| AspLEI | GCGC | 1 cut(s) | 969 |
| AspS9I | GGNCC | 4 cut(s) | 563, 1439, 1481, 1532 |
| AsuHPI | GGTGA | 2 cut(s) | 440, 1200 |
| AvaII | GGWCC | 4 cut(s) | 563, 1439, 1481, 1532 |
| AvrII | CCTAGG | 1 cut(s) | 17 |
| AxyI | CCTNAGG | 1 cut(s) | 1503 |
| BaeGI | GKGCMC | 1 cut(s) | 1020 |
| BalI | TGGCCA | 1 cut(s) | 1084 |
| BanII | GRGCYC | 1 cut(s) | 1569 |
| BbsI | GAAGAC | 2 cut(s) | 465, 634 |
| Bbv12I | GWGCWC | 1 cut(s) | 1569 |
| BbvI | GCAGC | 1 cut(s) | 25 |
| BccI | CCATC | 6 cut(s) | 651, 760, 831, 1280, 1387, 1421 |
| BceAI | ACGGC | 2 cut(s) | 1334, 1508 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1211, 1245 |
| BciT130I | CCWGG | 5 cut(s) | 558, 617, 1281, 1437, 1530 |
| BciVI | GTATCC | 1 cut(s) | 144 |
| BclI | TGATCA | 1 cut(s) | 1213 |
| BcoDI | GTCTC | 4 cut(s) | 350, 499, 672, 1572 |
| BfaI | CTAG | 3 cut(s) | 18, 285, 1289 |
| BfmI | CTRYAG | 2 cut(s) | 66, 1177 |
| BfrI | CTTAAG | 1 cut(s) | 1151 |
| BfuAI | ACCTGC | 1 cut(s) | 784 |
| BfuI | GTATCC | 1 cut(s) | 144 |
| BisI | GCNGC | 2 cut(s) | 39, 42 |
| BlnI | CCTAGG | 1 cut(s) | 17 |
| BlsI | GCNGC | 2 cut(s) | 40, 43 |
| Bme1390I | CCNGG | 5 cut(s) | 558, 617, 1281, 1437, 1530 |
| Bme18I | GGWCC | 4 cut(s) | 563, 1439, 1481, 1532 |
| BmgBI | CACGTC | 1 cut(s) | 997 |
| BmgT120I | GGNCC | 4 cut(s) | 563, 1439, 1481, 1532 |
| BmiI | GGNNCC | 3 cut(s) | 564, 821, 1482 |
| BmrFI | CCNGG | 5 cut(s) | 558, 617, 1281, 1437, 1530 |
| BmsI | GCATC | 6 cut(s) | 104, 482, 594, 682, 819, 1111 |
| BpiI | GAAGAC | 2 cut(s) | 465, 634 |
| BpmI | CTGGAG | 3 cut(s) | 312, 468, 673 |
| BsaBI | GATNNNNATC | 4 cut(s) | 267, 531, 1397, 1431 |
| BsaJI | CCNNGG | 8 cut(s) | 17, 53, 450, 557, 616, 683, 1158, 1280 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 735, 761, 765, 791 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 638, 876 |
| Bse1I | ACTGG | 6 cut(s) | 656, 735, 806, 1025, 1523, 1535 |
| Bse21I | CCTNAGG | 1 cut(s) | 1503 |
| Bse8I | GATNNNNATC | 4 cut(s) | 267, 531, 1397, 1431 |
| BseBI | CCWGG | 5 cut(s) | 558, 617, 1281, 1437, 1530 |
| BseDI | CCNNGG | 8 cut(s) | 17, 53, 450, 557, 616, 683, 1158, 1280 |
| BseGI | GGATG | 3 cut(s) | 1126, 1272, 1432 |
| BseJI | GATNNNNATC | 4 cut(s) | 267, 531, 1397, 1431 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 638, 876 |
| BseMII | CTCAG | 2 cut(s) | 683, 1517 |
| BseNI | ACTGG | 6 cut(s) | 656, 735, 806, 1025, 1523, 1535 |
| BseRI | GAGGAG | 1 cut(s) | 471 |
| BseSI | GKGCMC | 1 cut(s) | 1020 |
| BseXI | GCAGC | 1 cut(s) | 25 |
| Bsh1236I | CGCG | 1 cut(s) | 1364 |
| BshFI | GGCC | 4 cut(s) | 734, 1071, 1084, 1495 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1569 |
| BslFI | GGGAC | 3 cut(s) | 182, 576, 1494 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 638, 876 |
| BsmAI | GTCTC | 4 cut(s) | 350, 499, 672, 1572 |
| BsmBI | CGTCTC | 1 cut(s) | 672 |
| BsmFI | GGGAC | 3 cut(s) | 182, 576, 1494 |
| BsnI | GGCC | 4 cut(s) | 734, 1071, 1084, 1495 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1020, 1569 |
| Bsp143I | GATC | 6 cut(s) | 553, 952, 1059, 1213, 1247, 1467 |
| Bsp19I | CCATGG | 1 cut(s) | 1158 |
| BspACI | CCGC | 3 cut(s) | 41, 1182, 1364 |
| BspANI | GGCC | 4 cut(s) | 734, 1071, 1084, 1495 |
| BspCNI | CTCAG | 2 cut(s) | 682, 1516 |
| BspFNI | CGCG | 1 cut(s) | 1364 |
| BspLI | GGNNCC | 3 cut(s) | 564, 821, 1482 |
| BspMI | ACCTGC | 1 cut(s) | 784 |
| BspPI | GGATC | 3 cut(s) | 548, 960, 1255 |
| BspTI | CTTAAG | 1 cut(s) | 1151 |
| BsrI | ACTGG | 6 cut(s) | 656, 735, 806, 1025, 1523, 1535 |
| BssECI | CCNNGG | 8 cut(s) | 17, 53, 450, 557, 616, 683, 1158, 1280 |
| BssMI | GATC | 6 cut(s) | 553, 952, 1059, 1213, 1247, 1467 |
| BssNAI | GTATAC | 1 cut(s) | 320 |
| BssT1I | CCWWGG | 3 cut(s) | 17, 450, 1158 |
| Bst1107I | GTATAC | 1 cut(s) | 320 |
| Bst2UI | CCWGG | 5 cut(s) | 558, 617, 1281, 1437, 1530 |
| Bst4CI | ACNGT | 3 cut(s) | 70, 223, 666 |
| Bst6I | CTCTTC | 2 cut(s) | 233, 1050 |
| BstAFI | CTTAAG | 1 cut(s) | 1151 |
| BstC8I | GCNNGC | 3 cut(s) | 1329, 1514, 1526 |
| BstDEI | CTNAG | 2 cut(s) | 669, 1503 |
| BstDSI | CCRYGG | 1 cut(s) | 1158 |
| BstF5I | GGATG | 3 cut(s) | 1126, 1272, 1432 |
| BstFNI | CGCG | 1 cut(s) | 1364 |
| BstHHI | GCGC | 1 cut(s) | 969 |
| BstKTI | GATC | 6 cut(s) | 556, 955, 1062, 1216, 1250, 1470 |
| BstMAI | GTCTC | 4 cut(s) | 350, 499, 672, 1572 |
| BstMBI | GATC | 6 cut(s) | 553, 952, 1059, 1213, 1247, 1467 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1324 |
| BstNI | CCWGG | 5 cut(s) | 558, 617, 1281, 1437, 1530 |
| BstNSI | RCATGY | 1 cut(s) | 1528 |
| BstSCI | CCNGG | 5 cut(s) | 556, 615, 1279, 1435, 1528 |
| BstSFI | CTRYAG | 2 cut(s) | 66, 1177 |
| BstSLI | GKGCMC | 1 cut(s) | 1020 |
| BstUI | CGCG | 1 cut(s) | 1364 |
| BstV1I | GCAGC | 1 cut(s) | 25 |
| BstV2I | GAAGAC | 2 cut(s) | 465, 634 |
| BstX2I | RGATCY | 1 cut(s) | 952 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 623 |
| BstYI | RGATCY | 1 cut(s) | 952 |
| BstZ17I | GTATAC | 1 cut(s) | 320 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1503 |
| BsuI | GTATCC | 1 cut(s) | 144 |
| BsuRI | GGCC | 4 cut(s) | 734, 1071, 1084, 1495 |
| BtgI | CCRYGG | 1 cut(s) | 1158 |
| BtrI | CACGTC | 1 cut(s) | 997 |
| BtsCI | GGATG | 3 cut(s) | 1126, 1272, 1432 |
| BtsIMutI | CAGTG | 4 cut(s) | 677, 728, 1018, 1516 |
| BveI | ACCTGC | 1 cut(s) | 784 |
| Cac8I | GCNNGC | 3 cut(s) | 1329, 1514, 1526 |
| CfoI | GCGC | 1 cut(s) | 969 |
| Cfr13I | GGNCC | 4 cut(s) | 563, 1439, 1481, 1532 |
| CseI | GACGC | 1 cut(s) | 607 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1061, 1096 |
| CviAII | CATG | 9 cut(s) | 194, 775, 1102, 1159, 1251, 1319, 1424, 1525, 1545 |
| DdeI | CTNAG | 2 cut(s) | 669, 1503 |
| DpnI | GATC | 6 cut(s) | 555, 954, 1061, 1215, 1249, 1469 |
| DpnII | GATC | 6 cut(s) | 553, 952, 1059, 1213, 1247, 1467 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1001 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1001 |
| EaeI | YGGCCR | 1 cut(s) | 1082 |
| Eam1104I | CTCTTC | 2 cut(s) | 233, 1050 |
| EarI | CTCTTC | 2 cut(s) | 233, 1050 |
| Ecl136II | GAGCTC | 1 cut(s) | 1567 |
| Eco130I | CCWWGG | 3 cut(s) | 17, 450, 1158 |
| Eco24I | GRGCYC | 1 cut(s) | 1569 |
| Eco32I | GATATC | 2 cut(s) | 1399, 1418 |
| Eco47I | GGWCC | 4 cut(s) | 563, 1439, 1481, 1532 |
| Eco53kI | GAGCTC | 1 cut(s) | 1567 |
| Eco57I | CTGAAG | 5 cut(s) | 132, 218, 477, 492, 948 |
| Eco81I | CCTNAGG | 1 cut(s) | 1503 |
| EcoICRI | GAGCTC | 1 cut(s) | 1567 |
| EcoO109I | RGGNCCY | 1 cut(s) | 563 |
| EcoRII | CCWGG | 5 cut(s) | 556, 615, 1279, 1435, 1528 |
| EcoRV | GATATC | 2 cut(s) | 1399, 1418 |
| EcoT14I | CCWWGG | 3 cut(s) | 17, 450, 1158 |
| EcoT22I | ATGCAT | 2 cut(s) | 1126, 1320 |
| EcoT38I | GRGCYC | 1 cut(s) | 1569 |
| ErhI | CCWWGG | 3 cut(s) | 17, 450, 1158 |
| Esp3I | CGTCTC | 1 cut(s) | 672 |
| FaeI | CATG | 9 cut(s) | 197, 778, 1105, 1162, 1254, 1322, 1427, 1528, 1548 |
| FaqI | GGGAC | 3 cut(s) | 182, 576, 1494 |
| FatI | CATG | 9 cut(s) | 193, 774, 1101, 1158, 1250, 1318, 1423, 1524, 1544 |
| FbaI | TGATCA | 1 cut(s) | 1213 |
| FblI | GTMKAC | 3 cut(s) | 65, 319, 1041 |
| Fnu4HI | GCNGC | 2 cut(s) | 39, 42 |
| FokI | GGATG | 3 cut(s) | 1133, 1259, 1419 |
| FriOI | GRGCYC | 1 cut(s) | 1569 |
| Fsp4HI | GCNGC | 2 cut(s) | 39, 42 |
| FspBI | CTAG | 3 cut(s) | 18, 285, 1289 |
| GlaI | GCGC | 1 cut(s) | 968 |
| GluI | GCNGC | 2 cut(s) | 39, 42 |
| GsuI | CTGGAG | 3 cut(s) | 312, 468, 673 |
| HaeIII | GGCC | 4 cut(s) | 734, 1071, 1084, 1495 |
| HgaI | GACGC | 1 cut(s) | 607 |
| HhaI | GCGC | 1 cut(s) | 969 |
| Hin1II | CATG | 9 cut(s) | 197, 778, 1105, 1162, 1254, 1322, 1427, 1528, 1548 |
| Hin6I | GCGC | 1 cut(s) | 967 |
| HinP1I | GCGC | 1 cut(s) | 967 |
| HinfI | GANTC | 5 cut(s) | 178, 281, 746, 770, 1302 |
| HphI | GGTGA | 2 cut(s) | 440, 1200 |
| Hpy166II | GTNNAC | 4 cut(s) | 66, 320, 431, 1042 |
| Hpy8I | GTNNAC | 4 cut(s) | 66, 320, 431, 1042 |
| Hpy99I | CGWCG | 2 cut(s) | 998, 1355 |
| HpyAV | CCTTC | 5 cut(s) | 242, 794, 923, 1217, 1286 |
| HpyCH4III | ACNGT | 3 cut(s) | 70, 223, 666 |
| HpyCH4IV | ACGT | 3 cut(s) | 433, 996, 1116 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1324 |
| HpyF3I | CTNAG | 2 cut(s) | 669, 1503 |
| HpySE526I | ACGT | 3 cut(s) | 433, 996, 1116 |
| Hsp92II | CATG | 9 cut(s) | 197, 778, 1105, 1162, 1254, 1322, 1427, 1528, 1548 |
| HspAI | GCGC | 1 cut(s) | 967 |
| Ksp22I | TGATCA | 1 cut(s) | 1213 |
| Kzo9I | GATC | 6 cut(s) | 553, 952, 1059, 1213, 1247, 1467 |
| LmnI | GCTCC | 3 cut(s) | 819, 928, 1564 |
| Lsp1109I | GCAGC | 1 cut(s) | 25 |
| LweI | GCATC | 6 cut(s) | 104, 482, 594, 682, 819, 1111 |
| MaeI | CTAG | 3 cut(s) | 18, 285, 1289 |
| MaeII | ACGT | 3 cut(s) | 433, 996, 1116 |
| MaeIII | GTNAC | 2 cut(s) | 245, 934 |
| MalI | GATC | 6 cut(s) | 555, 954, 1061, 1215, 1249, 1469 |
| MboI | GATC | 6 cut(s) | 553, 952, 1059, 1213, 1247, 1467 |
| MboII | GAAGA | 8 cut(s) | 138, 250, 384, 470, 639, 947, 1067, 1277 |
| MfeI | CAATTG | 1 cut(s) | 75 |
| MflI | RGATCY | 1 cut(s) | 952 |
| MhlI | GDGCHC | 2 cut(s) | 1020, 1569 |
| MlsI | TGGCCA | 1 cut(s) | 1084 |
| MluCI | AATT | 8 cut(s) | 25, 75, 610, 701, 911, 989, 1073, 1369 |
| MluNI | TGGCCA | 1 cut(s) | 1084 |
| MlyI | GAGTC | 1 cut(s) | 779 |
| MmeI | TCCRAC | 1 cut(s) | 333 |
| Mox20I | TGGCCA | 1 cut(s) | 1084 |
| Mph1103I | ATGCAT | 2 cut(s) | 1126, 1320 |
| MroXI | GAANNNNTTC | 1 cut(s) | 189 |
| MscI | TGGCCA | 1 cut(s) | 1084 |
| MseI | TTAA | 2 cut(s) | 846, 1152 |
| Msp20I | TGGCCA | 1 cut(s) | 1084 |
| MspA1I | CMGCKG | 1 cut(s) | 1182 |
| MspCI | CTTAAG | 1 cut(s) | 1151 |
| MspR9I | CCNGG | 5 cut(s) | 558, 617, 1281, 1437, 1530 |
| MunI | CAATTG | 1 cut(s) | 75 |
| MvaI | CCWGG | 5 cut(s) | 558, 617, 1281, 1437, 1530 |
| MvnI | CGCG | 1 cut(s) | 1364 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1324 |
| NcoI | CCATGG | 1 cut(s) | 1158 |
| NdeII | GATC | 6 cut(s) | 553, 952, 1059, 1213, 1247, 1467 |
| NlaIII | CATG | 9 cut(s) | 197, 778, 1105, 1162, 1254, 1322, 1427, 1528, 1548 |
| NlaIV | GGNNCC | 3 cut(s) | 564, 821, 1482 |
| NmuCI | GTSAC | 2 cut(s) | 245, 934 |
| NsiI | ATGCAT | 2 cut(s) | 1126, 1320 |
| NspI | RCATGY | 1 cut(s) | 1528 |
| PaeI | GCATGC | 1 cut(s) | 1528 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 820, 912 |
| PdmI | GAANNNNTTC | 1 cut(s) | 189 |
| PfeI | GAWTC | 4 cut(s) | 178, 281, 746, 1302 |
| PkrI | GCNGC | 2 cut(s) | 40, 43 |
| PleI | GAGTC | 1 cut(s) | 778 |
| PpsI | GAGTC | 1 cut(s) | 778 |
| PpuMI | RGGWCCY | 1 cut(s) | 563 |
| Psp124BI | GAGCTC | 1 cut(s) | 1569 |
| Psp5II | RGGWCCY | 1 cut(s) | 563 |
| Psp6I | CCWGG | 5 cut(s) | 556, 615, 1279, 1435, 1528 |
| PspGI | CCWGG | 5 cut(s) | 556, 615, 1279, 1435, 1528 |
| PspN4I | GGNNCC | 3 cut(s) | 564, 821, 1482 |
| PspPI | GGNCC | 4 cut(s) | 563, 1439, 1481, 1532 |
| PspPPI | RGGWCCY | 1 cut(s) | 563 |
| PsuI | RGATCY | 1 cut(s) | 952 |
| SacI | GAGCTC | 1 cut(s) | 1569 |
| SaqAI | TTAA | 2 cut(s) | 846, 1152 |
| SatI | GCNGC | 2 cut(s) | 39, 42 |
| Sau3AI | GATC | 6 cut(s) | 553, 952, 1059, 1213, 1247, 1467 |
| Sau96I | GGNCC | 4 cut(s) | 563, 1439, 1481, 1532 |
| SchI | GAGTC | 1 cut(s) | 779 |
| ScrFI | CCNGG | 5 cut(s) | 558, 617, 1281, 1437, 1530 |
| SduI | GDGCHC | 2 cut(s) | 1020, 1569 |
| SfaNI | GCATC | 6 cut(s) | 104, 482, 594, 682, 819, 1111 |
| SfcI | CTRYAG | 2 cut(s) | 66, 1177 |
| SinI | GGWCC | 4 cut(s) | 563, 1439, 1481, 1532 |
| SmlI | CTYRAG | 1 cut(s) | 1151 |
| SmoI | CTYRAG | 1 cut(s) | 1151 |
| SphI | GCATGC | 1 cut(s) | 1528 |
| Sse9I | AATT | 8 cut(s) | 25, 75, 610, 701, 911, 989, 1073, 1369 |
| SsiI | CCGC | 3 cut(s) | 41, 1182, 1364 |
| SspMI | CTAG | 3 cut(s) | 18, 285, 1289 |
| SstI | GAGCTC | 1 cut(s) | 1569 |
| StyD4I | CCNGG | 5 cut(s) | 556, 615, 1279, 1435, 1528 |
| StyI | CCWWGG | 3 cut(s) | 17, 450, 1158 |
| TaaI | ACNGT | 3 cut(s) | 70, 223, 666 |
| TaiI | ACGT | 3 cut(s) | 436, 999, 1119 |
| TaqI | TCGA | 4 cut(s) | 915, 993, 1353, 1539 |
| TasI | AATT | 8 cut(s) | 25, 75, 610, 701, 911, 989, 1073, 1369 |
| TauI | GCSGC | 1 cut(s) | 44 |
| TfiI | GAWTC | 4 cut(s) | 178, 281, 746, 1302 |
| Tru1I | TTAA | 2 cut(s) | 846, 1152 |
| Tru9I | TTAA | 2 cut(s) | 846, 1152 |
| TscAI | CASTG | 4 cut(s) | 677, 735, 1025, 1523 |
| TseFI | GTSAC | 2 cut(s) | 245, 934 |
| TseI | GCWGC | 1 cut(s) | 38 |
| Tsp45I | GTSAC | 2 cut(s) | 245, 934 |
| TspDTI | ATGAA | 4 cut(s) | 182, 731, 884, 1118 |
| TspGWI | ACGGA | 2 cut(s) | 1314, 1503 |
| TspRI | CASTG | 4 cut(s) | 677, 735, 1025, 1523 |
| Vha464I | CTTAAG | 1 cut(s) | 1151 |
| VpaK11BI | GGWCC | 4 cut(s) | 563, 1439, 1481, 1532 |
| XapI | RAATTY | 4 cut(s) | 701, 911, 989, 1369 |
| XceI | RCATGY | 1 cut(s) | 1528 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1542 |
| XmaJI | CCTAGG | 1 cut(s) | 17 |
| XmiI | GTMKAC | 3 cut(s) | 65, 319, 1041 |
| XmnI | GAANNNNTTC | 1 cut(s) | 189 |
| XspI | CTAG | 3 cut(s) | 18, 285, 1289 |
| Zsp2I | ATGCAT | 2 cut(s) | 1126, 1320 |