Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0016552

Physical Location & Seq

Genomic Coordinates Forward (+)

13468423 .. 13470030

Gene Structure 1608 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G26710.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 213 bp

ATGGCTTTTGTTGTAACATCCCTGATATTCGCTGTCGTAGGCATCATTGCTTCGATATGCACTAGAATCTGCTTCAACAAAGGCCCCTCCACCAATCTGTTACATCTTACATTGGTCATCACCGCAACTGTCTGCTGTTGGATGATGTGGGCAATTGTATACATTGCGCAGATGAACCCTCTCATTGTCCCTATCTTAAGCGAGGTGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015672 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0034220 GO:0036442 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044444 GO:0044464 GO:0044769 GO:0046961 GO:0051179 GO:0051234 GO:0055085 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132 GO:1902600

KEGG Pathways

Metabolic & Signaling

ko00190 ko01100 ko04145 ko04721 ko04966 ko05110 ko05120 ko05323 map00190 map01100 map04145 map04721 map04966 map05110 map05120 map05323

Pfam Domains

Protein Families

ATP_synt_H

Protein Analysis

70

Amino Acids

7.69

Weight (kDa)

6.51

Isoelectric Point (pI)

23.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATP_synt_H	PF05493	3 - 67	2.6e-21	ATP synthase subunit H

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0016552)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26710 AT4G26710
fragaria_vesca	FvH4_3g23660
malus_domestica	MD03G1192100.v1.1 MD11G1208300.v1.1
prunus_persica	Prupe.4G225100_v2.0.a1
pyrus_communis	pycom03g14460
rosa_chinensis	RchiOBHm_Chr5g0041721
rosa_multiflora	Rmu_sc0000861.1_g000028
rosa_roxburghii	Rroxscaffold_1G00038790
rosa_samantha	Rh5AG280200 Rh5BG285700 Rh5DG294500
rosa_wichuraiana	Rw5G026400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	168
AccI	GTMKAC	1 cut(s)	159
AciI	CCGC	1 cut(s)	123
AflII	CTTAAG	1 cut(s)	196
AgsI	TTSAA	1 cut(s)	76
AoxI	GGCC	1 cut(s)	82
AspLEI	GCGC	1 cut(s)	169
AspS9I	GGNCC	1 cut(s)	83
AsuHPI	GGTGA	1 cut(s)	112
BfaI	CTAG	1 cut(s)	63
BfrI	CTTAAG	1 cut(s)	196
BmgT120I	GGNCC	1 cut(s)	83
BmiI	GGNNCC	1 cut(s)	85
BmsI	GCATC	1 cut(s)	51
Bse3DI	GCAATG	2 cut(s)	45, 162
BseGI	GGATG	2 cut(s)	17, 147
BseMI	GCAATG	2 cut(s)	45, 162
BshFI	GGCC	1 cut(s)	84
BslFI	GGGAC	1 cut(s)	173
BsmFI	GGGAC	1 cut(s)	173
BsnI	GGCC	1 cut(s)	84
BspACI	CCGC	1 cut(s)	123
BspANI	GGCC	1 cut(s)	84
BspLI	GGNNCC	1 cut(s)	85
BspTI	CTTAAG	1 cut(s)	196
BsrDI	GCAATG	2 cut(s)	45, 162
BssNAI	GTATAC	1 cut(s)	160
Bst1107I	GTATAC	1 cut(s)	160
Bst4CI	ACNGT	1 cut(s)	130
BstAFI	CTTAAG	1 cut(s)	196
BstF5I	GGATG	2 cut(s)	17, 147
BstHHI	GCGC	1 cut(s)	169
BstZ17I	GTATAC	1 cut(s)	160
BsuRI	GGCC	1 cut(s)	84
BtsCI	GGATG	2 cut(s)	17, 147
CfoI	GCGC	1 cut(s)	169
Cfr13I	GGNCC	1 cut(s)	83
CviJI	RGCY	2 cut(s)	5, 84
CviKI_1	RGCY	2 cut(s)	5, 84
EcoO109I	RGGNCCY	1 cut(s)	83
FaiI	YATR	2 cut(s)	58, 160
FaqI	GGGAC	1 cut(s)	173
FblI	GTMKAC	1 cut(s)	159
FokI	GGATG	2 cut(s)	4, 154
FspBI	CTAG	1 cut(s)	63
FspI	TGCGCA	1 cut(s)	168
GlaI	GCGC	1 cut(s)	168
HaeIII	GGCC	1 cut(s)	84
HhaI	GCGC	1 cut(s)	169
Hin6I	GCGC	1 cut(s)	167
HinP1I	GCGC	1 cut(s)	167
HinfI	GANTC	1 cut(s)	66
HphI	GGTGA	1 cut(s)	112
Hpy166II	GTNNAC	1 cut(s)	160
Hpy8I	GTNNAC	1 cut(s)	160
HpyCH4III	ACNGT	1 cut(s)	130
HpyCH4V	TGCA	1 cut(s)	60
HspAI	GCGC	1 cut(s)	167
LpnPI	CCDG	1 cut(s)	35
LweI	GCATC	1 cut(s)	51
MaeI	CTAG	1 cut(s)	63
MaeIII	GTNAC	2 cut(s)	13, 99
MfeI	CAATTG	1 cut(s)	153
MluCI	AATT	1 cut(s)	153
MmeI	TCCRAC	1 cut(s)	119
MnlI	CCTC	3 cut(s)	97, 189, 196
MseI	TTAA	1 cut(s)	197
MspCI	CTTAAG	1 cut(s)	196
MunI	CAATTG	1 cut(s)	153
NlaIV	GGNNCC	1 cut(s)	85
NsbI	TGCGCA	1 cut(s)	168
PfeI	GAWTC	1 cut(s)	66
PspN4I	GGNNCC	1 cut(s)	85
PspPI	GGNCC	1 cut(s)	83
SaqAI	TTAA	1 cut(s)	197
Sau96I	GGNCC	1 cut(s)	83
SetI	ASST	1 cut(s)	207
SfaNI	GCATC	1 cut(s)	51
SgeI	CNNG	2 cut(s)	34, 75
SmlI	CTYRAG	1 cut(s)	196
SmoI	CTYRAG	1 cut(s)	196
Sse9I	AATT	1 cut(s)	153
SsiI	CCGC	1 cut(s)	123
SspMI	CTAG	1 cut(s)	63
TaaI	ACNGT	1 cut(s)	130
TaqI	TCGA	1 cut(s)	53
TasI	AATT	1 cut(s)	153
TfiI	GAWTC	1 cut(s)	66
Tru1I	TTAA	1 cut(s)	197
Tru9I	TTAA	1 cut(s)	197
TspDTI	ATGAA	1 cut(s)	188
Vha464I	CTTAAG	1 cut(s)	196
XmiI	GTMKAC	1 cut(s)	159
XspI	CTAG	1 cut(s)	63

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.