Prupe.4G225100_v2.0.a1

V-type proton ATPase subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
14163701 .. 14166350
2650 bp
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UTR
Exon/CDS
Intron
Prupe.4G225100.1

Sequence Viewer

Length: 213 bp
ATGGGGTTTTTGGTAACGACCTTAATTTTCCTTGTGATTGGGATCATTGCTTCTCTGTGTACCAGAATTTGCTGCAACCGAGGACCTTCTACTAATTTGTTCCATCTAACATTGGTTATTACAGCAACAATCTGCTGCTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAACCACTCATAGTCCCTATTCTAAATGAAGGAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

71

Amino Acids

7.79

Weight (kDa)

7.63

Isoelectric Point (pI)

15.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016552)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G26710 AT4G26710
fragaria_vesca FvH4_3g23660
malus_domestica MD03G1192100.v1.1 MD11G1208300.v1.1
prunus_persica Prupe.4G225100_v2.0.a1
pyrus_communis pycom03g14460
rosa_chinensis RchiOBHm_Chr5g0041721
rosa_multiflora Rmu_sc0000861.1_g000028
rosa_roxburghii Rroxscaffold_1G00038790
rosa_samantha Rh5AG280200 Rh5BG285700 Rh5DG294500
rosa_wichuraiana Rw5G026400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 50
AcsI RAATTY 1 cut(s) 66
AfaI GTAC 1 cut(s) 61
AlwI GGATC 1 cut(s) 50
ApeKI GCWGC 2 cut(s) 72, 135
ApoI RAATTY 1 cut(s) 66
AspS9I GGNCC 1 cut(s) 83
AvaII GGWCC 1 cut(s) 83
BbvI GCAGC 2 cut(s) 59, 122
BccI CCATC 1 cut(s) 111
BisI GCNGC 2 cut(s) 73, 136
BlsI GCNGC 2 cut(s) 74, 137
Bme18I GGWCC 1 cut(s) 83
BmgT120I GGNCC 1 cut(s) 83
BsaBI GATNNNNATC 1 cut(s) 41
BsaJI CCNNGG 1 cut(s) 79
Bse3DI GCAATG 1 cut(s) 45
Bse8I GATNNNNATC 1 cut(s) 41
BseDI CCNNGG 1 cut(s) 79
BseGI GGATG 1 cut(s) 147
BseJI GATNNNNATC 1 cut(s) 41
BseMI GCAATG 1 cut(s) 45
BseXI GCAGC 2 cut(s) 59, 122
BslFI GGGAC 1 cut(s) 173
BsmFI GGGAC 1 cut(s) 173
Bsp143I GATC 1 cut(s) 42
BspPI GGATC 1 cut(s) 50
BsrDI GCAATG 1 cut(s) 45
BssECI CCNNGG 1 cut(s) 79
BssMI GATC 1 cut(s) 42
BstF5I GGATG 1 cut(s) 147
BstKTI GATC 1 cut(s) 45
BstMBI GATC 1 cut(s) 42
BstV1I GCAGC 2 cut(s) 59, 122
BtsCI GGATG 1 cut(s) 147
Cfr13I GGNCC 1 cut(s) 83
Csp6I GTAC 1 cut(s) 60
CviQI GTAC 1 cut(s) 60
DpnI GATC 1 cut(s) 44
DpnII GATC 1 cut(s) 42
Eco47I GGWCC 1 cut(s) 83
EcoO109I RGGNCCY 1 cut(s) 83
FaiI YATR 2 cut(s) 160, 185
FaqI GGGAC 1 cut(s) 173
Fnu4HI GCNGC 2 cut(s) 73, 136
FokI GGATG 1 cut(s) 154
Fsp4HI GCNGC 2 cut(s) 73, 136
GluI GCNGC 2 cut(s) 73, 136
Hpy166II GTNNAC 1 cut(s) 60
Hpy8I GTNNAC 1 cut(s) 60
HpyAV CCTTC 2 cut(s) 96, 197
HpyCH4V TGCA 2 cut(s) 75, 167
Kzo9I GATC 1 cut(s) 42
LpnPI CCDG 2 cut(s) 76, 124
Lsp1109I GCAGC 2 cut(s) 59, 122
MaeIII GTNAC 1 cut(s) 13
MalI GATC 1 cut(s) 44
MboI GATC 1 cut(s) 42
MfeI CAATTG 1 cut(s) 153
MluCI AATT 4 cut(s) 24, 66, 94, 153
MnlI CCTC 1 cut(s) 74
MseI TTAA 1 cut(s) 23
MunI CAATTG 1 cut(s) 153
NdeII GATC 1 cut(s) 42
PkrI GCNGC 2 cut(s) 74, 137
PpuMI RGGWCCY 1 cut(s) 83
Psp5II RGGWCCY 1 cut(s) 83
PspPI GGNCC 1 cut(s) 83
PspPPI RGGWCCY 1 cut(s) 83
RsaI GTAC 1 cut(s) 61
RsaNI GTAC 1 cut(s) 60
SaqAI TTAA 1 cut(s) 23
SatI GCNGC 2 cut(s) 73, 136
Sau3AI GATC 1 cut(s) 42
Sau96I GGNCC 1 cut(s) 83
SetI ASST 2 cut(s) 23, 88
SgeI CNNG 5 cut(s) 44, 75, 92, 151, 176
SinI GGWCC 1 cut(s) 83
Sse9I AATT 4 cut(s) 24, 66, 94, 153
TasI AATT 4 cut(s) 24, 66, 94, 153
Tru1I TTAA 1 cut(s) 23
Tru9I TTAA 1 cut(s) 23
TseI GCWGC 2 cut(s) 72, 135
TspDTI ATGAA 1 cut(s) 188
VpaK11BI GGWCC 1 cut(s) 83
XapI RAATTY 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.