Indole-3-acetic acid-amido synthetase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27260 AT5G54510 |
| fragaria_vesca | FvH4_3g21460 |
| malus_domestica | MD03G1215800.v1.1 MD11G1230400.v1.1 |
| prunus_persica | Prupe.4G197000_v2.0.a1 |
| pyrus_communis | pycom03g16410 pycom11g20410 |
| rosa_chinensis | RchiOBHm_Chr5g0036891 |
| rosa_laevigata | RLG00000033732 |
| rosa_multiflora | Rmu_sc0007663.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00044060 |
| rosa_rugosa | Rorug05G0158600 |
| rosa_samantha | Rh5CG285100 |
| rosa_wichuraiana | Rw5G023080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 10 |
| AccII | CGCG | 1 cut(s) | 1397 |
| AciI | CCGC | 4 cut(s) | 145, 812, 1397, 1628 |
| AclWI | GGATC | 6 cut(s) | 272, 563, 749, 788, 817, 1525 |
| AcsI | RAATTY | 1 cut(s) | 860 |
| AcuI | CTGAAG | 4 cut(s) | 59, 783, 1373, 1768 |
| AcyI | GRCGYC | 1 cut(s) | 1718 |
| AfaI | GTAC | 2 cut(s) | 635, 1451 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 888, 1501, 1540 |
| AgsI | TTSAA | 5 cut(s) | 211, 553, 1303, 1582, 1759 |
| AjiI | CACGTC | 1 cut(s) | 157 |
| AjnI | CCWGG | 7 cut(s) | 436, 496, 666, 881, 1480, 1651, 1810 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 763, 795 |
| Alw26I | GTCTC | 6 cut(s) | 197, 410, 446, 593, 957, 1078 |
| AlwI | GGATC | 6 cut(s) | 272, 563, 749, 788, 817, 1525 |
| AoxI | GGCC | 5 cut(s) | 502, 908, 1049, 1483, 1624 |
| ApeKI | GCWGC | 1 cut(s) | 1557 |
| ApoI | RAATTY | 1 cut(s) | 860 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1332, 1364 |
| AseI | ATTAAT | 1 cut(s) | 1704 |
| AspLEI | GCGC | 2 cut(s) | 689, 1315 |
| AspS9I | GGNCC | 2 cut(s) | 751, 1625 |
| AsuC2I | CCSGG | 3 cut(s) | 769, 943, 1255 |
| AsuHPI | GGTGA | 8 cut(s) | 85, 223, 276, 287, 781, 1234, 1289, 1411 |
| AsuNHI | GCTAGC | 1 cut(s) | 844 |
| AvaII | GGWCC | 1 cut(s) | 751 |
| AxyI | CCTNAGG | 1 cut(s) | 6 |
| BanI | GGYRCC | 1 cut(s) | 10 |
| BanII | GRGCYC | 1 cut(s) | 839 |
| BauI | CACGAG | 1 cut(s) | 1453 |
| BbsI | GAAGAC | 2 cut(s) | 685, 1537 |
| BbvI | GCAGC | 1 cut(s) | 1544 |
| BccI | CCATC | 7 cut(s) | 314, 611, 725, 1099, 1157, 1484, 1511 |
| BceAI | ACGGC | 1 cut(s) | 466 |
| BciT130I | CCWGG | 7 cut(s) | 438, 498, 668, 883, 1482, 1653, 1812 |
| BclI | TGATCA | 1 cut(s) | 786 |
| BcnI | CCSGG | 3 cut(s) | 769, 943, 1255 |
| BcoDI | GTCTC | 6 cut(s) | 197, 410, 446, 593, 957, 1078 |
| BfaI | CTAG | 4 cut(s) | 380, 845, 900, 1202 |
| BfmI | CTRYAG | 3 cut(s) | 400, 979, 1566 |
| BfoI | RGCGCY | 2 cut(s) | 690, 1316 |
| BglII | AGATCT | 1 cut(s) | 135 |
| BisI | GCNGC | 1 cut(s) | 1558 |
| BlpI | GCTNAGC | 1 cut(s) | 1561 |
| BlsI | GCNGC | 1 cut(s) | 1559 |
| Bme18I | GGWCC | 1 cut(s) | 751 |
| BmgBI | CACGTC | 1 cut(s) | 157 |
| BmgT120I | GGNCC | 2 cut(s) | 751, 1625 |
| BmiI | GGNNCC | 2 cut(s) | 12, 1809 |
| BmsI | GCATC | 5 cut(s) | 402, 633, 1423, 1706, 1715 |
| BmtI | GCTAGC | 1 cut(s) | 848 |
| BpiI | GAAGAC | 2 cut(s) | 685, 1537 |
| BpmI | CTGGAG | 1 cut(s) | 480 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1561 |
| BpuEI | CTTGAG | 4 cut(s) | 749, 1372, 1652, 1747 |
| BpuMI | CCSGG | 3 cut(s) | 769, 943, 1255 |
| Bsa29I | ATCGAT | 1 cut(s) | 1700 |
| BsaHI | GRCGYC | 1 cut(s) | 1718 |
| BsaI | GGTCTC | 3 cut(s) | 446, 593, 1078 |
| BsaJI | CCNNGG | 3 cut(s) | 1095, 1480, 1652 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 888, 1501, 1540 |
| Bse1I | ACTGG | 4 cut(s) | 427, 528, 743, 1300 |
| Bse21I | CCTNAGG | 1 cut(s) | 6 |
| Bse3DI | GCAATG | 1 cut(s) | 154 |
| BseBI | CCWGG | 7 cut(s) | 438, 498, 668, 883, 1482, 1653, 1812 |
| BseCI | ATCGAT | 1 cut(s) | 1700 |
| BseDI | CCNNGG | 3 cut(s) | 1095, 1480, 1652 |
| BseGI | GGATG | 5 cut(s) | 603, 934, 1091, 1476, 1522 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 888, 1501, 1540 |
| BseMI | GCAATG | 1 cut(s) | 154 |
| BseMII | CTCAG | 7 cut(s) | 181, 243, 303, 653, 1014, 1164, 1437 |
| BseNI | ACTGG | 4 cut(s) | 427, 528, 743, 1300 |
| BseRI | GAGGAG | 3 cut(s) | 146, 386, 389 |
| BseXI | GCAGC | 1 cut(s) | 1544 |
| BsgI | GTGCAG | 1 cut(s) | 988 |
| Bsh1236I | CGCG | 1 cut(s) | 1397 |
| Bsh1285I | CGRYCG | 2 cut(s) | 190, 816 |
| BshFI | GGCC | 5 cut(s) | 504, 910, 1051, 1485, 1626 |
| BshNI | GGYRCC | 1 cut(s) | 10 |
| BshVI | ATCGAT | 1 cut(s) | 1700 |
| BsiEI | CGRYCG | 2 cut(s) | 190, 816 |
| BsiSI | CCGG | 3 cut(s) | 768, 942, 1254 |
| BslFI | GGGAC | 5 cut(s) | 346, 784, 958, 1409, 1669 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 888, 1501, 1540 |
| BsmAI | GTCTC | 6 cut(s) | 197, 410, 446, 593, 957, 1078 |
| BsmFI | GGGAC | 5 cut(s) | 346, 784, 958, 1409, 1669 |
| BsnI | GGCC | 5 cut(s) | 504, 910, 1051, 1485, 1626 |
| Bso31I | GGTCTC | 3 cut(s) | 446, 593, 1078 |
| Bsp1286I | GDGCHC | 1 cut(s) | 839 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1561 |
| Bsp19I | CCATGG | 1 cut(s) | 1095 |
| BspACI | CCGC | 4 cut(s) | 145, 812, 1397, 1628 |
| BspANI | GGCC | 5 cut(s) | 504, 910, 1051, 1485, 1626 |
| BspCNI | CTCAG | 7 cut(s) | 180, 244, 304, 652, 1015, 1165, 1438 |
| BspDI | ATCGAT | 1 cut(s) | 1700 |
| BspFNI | CGCG | 1 cut(s) | 1397 |
| BspLI | GGNNCC | 2 cut(s) | 12, 1809 |
| BspOI | GCTAGC | 1 cut(s) | 848 |
| BspPI | GGATC | 6 cut(s) | 272, 563, 749, 788, 817, 1525 |
| BspT107I | GGYRCC | 1 cut(s) | 10 |
| BspTNI | GGTCTC | 3 cut(s) | 446, 593, 1078 |
| BsrDI | GCAATG | 1 cut(s) | 154 |
| BsrI | ACTGG | 4 cut(s) | 427, 528, 743, 1300 |
| BssECI | CCNNGG | 3 cut(s) | 1095, 1480, 1652 |
| BssNI | GRCGYC | 1 cut(s) | 1718 |
| BssSI | CACGAG | 1 cut(s) | 1453 |
| BssT1I | CCWWGG | 1 cut(s) | 1095 |
| Bst2BI | CACGAG | 1 cut(s) | 1453 |
| Bst2UI | CCWGG | 7 cut(s) | 438, 498, 668, 883, 1482, 1653, 1812 |
| Bst4CI | ACNGT | 7 cut(s) | 188, 200, 404, 983, 1136, 1588, 1824 |
| Bst6I | CTCTTC | 3 cut(s) | 301, 366, 1566 |
| BstACI | GRCGYC | 1 cut(s) | 1718 |
| BstC8I | GCNNGC | 3 cut(s) | 846, 992, 1628 |
| BstDSI | CCRYGG | 1 cut(s) | 1095 |
| BstF5I | GGATG | 5 cut(s) | 603, 934, 1091, 1476, 1522 |
| BstFNI | CGCG | 1 cut(s) | 1397 |
| BstH2I | RGCGCY | 2 cut(s) | 690, 1316 |
| BstHHI | GCGC | 2 cut(s) | 689, 1315 |
| BstMAI | GTCTC | 6 cut(s) | 197, 410, 446, 593, 957, 1078 |
| BstMCI | CGRYCG | 2 cut(s) | 190, 816 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 695, 1065, 1189 |
| BstNI | CCWGG | 7 cut(s) | 438, 498, 668, 883, 1482, 1653, 1812 |
| BstNSI | RCATGY | 1 cut(s) | 634 |
| BstSFI | CTRYAG | 3 cut(s) | 400, 979, 1566 |
| BstUI | CGCG | 1 cut(s) | 1397 |
| BstV1I | GCAGC | 1 cut(s) | 1544 |
| BstV2I | GAAGAC | 2 cut(s) | 685, 1537 |
| BstX2I | RGATCY | 2 cut(s) | 135, 822 |
| BstYI | RGATCY | 2 cut(s) | 135, 822 |
| Bsu15I | ATCGAT | 1 cut(s) | 1700 |
| Bsu36I | CCTNAGG | 1 cut(s) | 6 |
| BsuRI | GGCC | 5 cut(s) | 504, 910, 1051, 1485, 1626 |
| BsuTUI | ATCGAT | 1 cut(s) | 1700 |
| BtgI | CCRYGG | 1 cut(s) | 1095 |
| BtrI | CACGTC | 1 cut(s) | 157 |
| BtsCI | GGATG | 5 cut(s) | 603, 934, 1091, 1476, 1522 |
| BtsI | GCAGTG | 1 cut(s) | 1416 |
| BtsIMutI | CAGTG | 7 cut(s) | 192, 736, 807, 1170, 1416, 1584, 1829 |
| Cac8I | GCNNGC | 3 cut(s) | 846, 992, 1628 |
| CfoI | GCGC | 2 cut(s) | 689, 1315 |
| Cfr13I | GGNCC | 2 cut(s) | 751, 1625 |
| ClaI | ATCGAT | 1 cut(s) | 1700 |
| CseI | GACGC | 2 cut(s) | 55, 1726 |
| Csp6I | GTAC | 2 cut(s) | 634, 1450 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 906, 941 |
| CviAII | CATG | 4 cut(s) | 220, 631, 1096, 1672 |
| CviQI | GTAC | 2 cut(s) | 634, 1450 |
| Eam1104I | CTCTTC | 3 cut(s) | 301, 366, 1566 |
| EarI | CTCTTC | 3 cut(s) | 301, 366, 1566 |
| Eco130I | CCWWGG | 1 cut(s) | 1095 |
| Eco147I | AGGCCT | 1 cut(s) | 504 |
| Eco24I | GRGCYC | 1 cut(s) | 839 |
| Eco31I | GGTCTC | 3 cut(s) | 446, 593, 1078 |
| Eco47I | GGWCC | 1 cut(s) | 751 |
| Eco57I | CTGAAG | 4 cut(s) | 59, 783, 1373, 1768 |
| Eco81I | CCTNAGG | 1 cut(s) | 6 |
| EcoRII | CCWGG | 7 cut(s) | 436, 496, 666, 881, 1480, 1651, 1810 |
| EcoT14I | CCWWGG | 1 cut(s) | 1095 |
| EcoT38I | GRGCYC | 1 cut(s) | 839 |
| ErhI | CCWWGG | 1 cut(s) | 1095 |
| FaeI | CATG | 4 cut(s) | 223, 634, 1099, 1675 |
| FaqI | GGGAC | 5 cut(s) | 346, 784, 958, 1409, 1669 |
| FatI | CATG | 4 cut(s) | 219, 630, 1095, 1671 |
| FauI | CCCGC | 2 cut(s) | 152, 1635 |
| FauNDI | CATATG | 1 cut(s) | 1331 |
| FbaI | TGATCA | 1 cut(s) | 786 |
| Fnu4HI | GCNGC | 1 cut(s) | 1558 |
| FokI | GGATG | 5 cut(s) | 590, 941, 1078, 1463, 1529 |
| FriOI | GRGCYC | 1 cut(s) | 839 |
| Fsp4HI | GCNGC | 1 cut(s) | 1558 |
| FspBI | CTAG | 4 cut(s) | 380, 845, 900, 1202 |
| GlaI | GCGC | 2 cut(s) | 688, 1314 |
| GluI | GCNGC | 1 cut(s) | 1558 |
| GsuI | CTGGAG | 1 cut(s) | 480 |
| HaeII | RGCGCY | 2 cut(s) | 690, 1316 |
| HaeIII | GGCC | 5 cut(s) | 504, 910, 1051, 1485, 1626 |
| HapII | CCGG | 3 cut(s) | 768, 942, 1254 |
| HgaI | GACGC | 2 cut(s) | 55, 1726 |
| HhaI | GCGC | 2 cut(s) | 689, 1315 |
| Hin1I | GRCGYC | 1 cut(s) | 1718 |
| Hin1II | CATG | 4 cut(s) | 223, 634, 1099, 1675 |
| Hin6I | GCGC | 2 cut(s) | 687, 1313 |
| HinP1I | GCGC | 2 cut(s) | 687, 1313 |
| HincII | GTYRAC | 1 cut(s) | 662 |
| HindII | GTYRAC | 1 cut(s) | 662 |
| HindIII | AAGCTT | 2 cut(s) | 71, 1214 |
| HpaII | CCGG | 3 cut(s) | 768, 942, 1254 |
| HphI | GGTGA | 8 cut(s) | 85, 223, 276, 287, 781, 1234, 1289, 1411 |
| Hpy166II | GTNNAC | 2 cut(s) | 662, 1452 |
| Hpy188III | TCNNGA | 9 cut(s) | 139, 409, 443, 702, 728, 1223, 1303, 1351, 1639 |
| Hpy8I | GTNNAC | 2 cut(s) | 662, 1452 |
| Hpy99I | CGWCG | 1 cut(s) | 1379 |
| HpyAV | CCTTC | 4 cut(s) | 807, 1166, 1548, 1596 |
| HpyCH4III | ACNGT | 7 cut(s) | 188, 200, 404, 983, 1136, 1588, 1824 |
| HpyCH4IV | ACGT | 1 cut(s) | 156 |
| HpyCH4V | TGCA | 5 cut(s) | 870, 1005, 1059, 1263, 1463 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 695, 1065, 1189 |
| HpySE526I | ACGT | 1 cut(s) | 156 |
| Hsp92I | GRCGYC | 1 cut(s) | 1718 |
| Hsp92II | CATG | 4 cut(s) | 223, 634, 1099, 1675 |
| HspAI | GCGC | 2 cut(s) | 687, 1313 |
| Ksp22I | TGATCA | 1 cut(s) | 786 |
| LmnI | GCTCC | 4 cut(s) | 376, 1504, 1694, 1744 |
| Lsp1109I | GCAGC | 1 cut(s) | 1544 |
| LweI | GCATC | 5 cut(s) | 402, 633, 1423, 1706, 1715 |
| MaeI | CTAG | 4 cut(s) | 380, 845, 900, 1202 |
| MaeII | ACGT | 1 cut(s) | 156 |
| MboII | GAAGA | 9 cut(s) | 98, 251, 288, 383, 534, 685, 1414, 1537, 1583 |
| MflI | RGATCY | 2 cut(s) | 135, 822 |
| MhlI | GDGCHC | 1 cut(s) | 839 |
| MluCI | AATT | 3 cut(s) | 860, 1319, 1743 |
| MlyI | GAGTC | 5 cut(s) | 487, 611, 690, 766, 1583 |
| MmeI | TCCRAC | 2 cut(s) | 989, 1389 |
| MseI | TTAA | 3 cut(s) | 524, 828, 1704 |
| MspI | CCGG | 3 cut(s) | 768, 942, 1254 |
| MvaI | CCWGG | 7 cut(s) | 438, 498, 668, 883, 1482, 1653, 1812 |
| MvnI | CGCG | 1 cut(s) | 1397 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 695, 1065, 1189 |
| NciI | CCSGG | 3 cut(s) | 769, 943, 1255 |
| NcoI | CCATGG | 1 cut(s) | 1095 |
| NdeI | CATATG | 1 cut(s) | 1331 |
| NheI | GCTAGC | 1 cut(s) | 844 |
| NlaIII | CATG | 4 cut(s) | 223, 634, 1099, 1675 |
| NlaIV | GGNNCC | 2 cut(s) | 12, 1809 |
| NmeAIII | GCCGAG | 1 cut(s) | 1746 |
| NmuCI | GTSAC | 7 cut(s) | 755, 937, 1240, 1291, 1411, 1610, 1814 |
| NspI | RCATGY | 1 cut(s) | 634 |
| PceI | AGGCCT | 1 cut(s) | 504 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 196 |
| PfeI | GAWTC | 5 cut(s) | 23, 485, 705, 1042, 1361 |
| PflFI | GACNNNGTC | 2 cut(s) | 110, 949 |
| PfoI | TCCNGGA | 1 cut(s) | 496 |
| PkrI | GCNGC | 1 cut(s) | 1559 |
| PleI | GAGTC | 5 cut(s) | 487, 611, 689, 766, 1582 |
| PpsI | GAGTC | 5 cut(s) | 487, 611, 689, 766, 1582 |
| PshBI | ATTAAT | 1 cut(s) | 1704 |
| Psp6I | CCWGG | 7 cut(s) | 436, 496, 666, 881, 1480, 1651, 1810 |
| PspGI | CCWGG | 7 cut(s) | 436, 496, 666, 881, 1480, 1651, 1810 |
| PspN4I | GGNNCC | 2 cut(s) | 12, 1809 |
| PspPI | GGNCC | 2 cut(s) | 751, 1625 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 455, 487 |
| PsuI | RGATCY | 2 cut(s) | 135, 822 |
| PsyI | GACNNNGTC | 2 cut(s) | 110, 949 |
| RsaI | GTAC | 2 cut(s) | 635, 1451 |
| RsaNI | GTAC | 2 cut(s) | 634, 1450 |
| SaqAI | TTAA | 3 cut(s) | 524, 828, 1704 |
| SatI | GCNGC | 1 cut(s) | 1558 |
| Sau96I | GGNCC | 2 cut(s) | 751, 1625 |
| SchI | GAGTC | 5 cut(s) | 487, 611, 690, 766, 1583 |
| SduI | GDGCHC | 1 cut(s) | 839 |
| SfaNI | GCATC | 5 cut(s) | 402, 633, 1423, 1706, 1715 |
| SfcI | CTRYAG | 3 cut(s) | 400, 979, 1566 |
| SinI | GGWCC | 1 cut(s) | 751 |
| SmlI | CTYRAG | 4 cut(s) | 728, 1351, 1631, 1762 |
| SmoI | CTYRAG | 4 cut(s) | 728, 1351, 1631, 1762 |
| Sse9I | AATT | 3 cut(s) | 860, 1319, 1743 |
| SseBI | AGGCCT | 1 cut(s) | 504 |
| SsiI | CCGC | 4 cut(s) | 145, 812, 1397, 1628 |
| SspMI | CTAG | 4 cut(s) | 380, 845, 900, 1202 |
| StuI | AGGCCT | 1 cut(s) | 504 |
| StyI | CCWWGG | 1 cut(s) | 1095 |
| TaaI | ACNGT | 7 cut(s) | 188, 200, 404, 983, 1136, 1588, 1824 |
| TaiI | ACGT | 1 cut(s) | 159 |
| TaqII | GACCGA | 2 cut(s) | 1388, 1531 |
| TasI | AATT | 3 cut(s) | 860, 1319, 1743 |
| TatI | WGTACW | 2 cut(s) | 633, 1449 |
| TfiI | GAWTC | 5 cut(s) | 23, 485, 705, 1042, 1361 |
| Tru1I | TTAA | 3 cut(s) | 524, 828, 1704 |
| Tru9I | TTAA | 3 cut(s) | 524, 828, 1704 |
| TscAI | CASTG | 7 cut(s) | 199, 743, 807, 1177, 1416, 1591, 1829 |
| TseFI | GTSAC | 7 cut(s) | 755, 937, 1240, 1291, 1411, 1610, 1814 |
| TseI | GCWGC | 1 cut(s) | 1557 |
| Tsp45I | GTSAC | 7 cut(s) | 755, 937, 1240, 1291, 1411, 1610, 1814 |
| TspDTI | ATGAA | 4 cut(s) | 463, 697, 1112, 1318 |
| TspGWI | ACGGA | 1 cut(s) | 743 |
| TspRI | CASTG | 7 cut(s) | 199, 743, 807, 1177, 1416, 1591, 1829 |
| Tth111I | GACNNNGTC | 2 cut(s) | 110, 949 |
| VpaK11BI | GGWCC | 1 cut(s) | 751 |
| VspI | ATTAAT | 1 cut(s) | 1704 |
| XapI | RAATTY | 1 cut(s) | 860 |
| XceI | RCATGY | 1 cut(s) | 634 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 434 |
| XspI | CTAG | 4 cut(s) | 380, 845, 900, 1202 |