Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0015833

Physical Location & Seq

Genomic Coordinates Reverse (-)

17591866 .. 17594051

Gene Structure 2186 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g16410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGCCTGAAGCACCGAAGAAATTTCTGAATCCCACGGAGGACTATAACCTCCAAGACAAGAACAACAAGATCCTTCACTTCATCGAAGAAGTCACAAAAACCCCCCACGAGGTTCAAAAACGAGTCCTCGCTGAAATCCTCACCCGTAATGCTCACGTCGAGTACTTGCAGCGCCACGGCCTCAACGGTCACACTGACCGTGACACTTTCAAAAAAATCATGCCCGTTATCAAATACGAAGATATCCAGTCAGATATCAACCGTATCGCCAATGGTGACACCTCCCATATCCTCTGTTCCAAGCCCATTTGTGAGTTTTTGACCAGTTCTGGCACATCCGGAGGGGAAAGAAAACTGATGCCAACAATTGAAGAGGAGCTAGAGAGGAGGTCTTTACTTTACAGTCTGCTGATGCCTGTGATGAGCCAGTATGTCCCCGGACTGGACAAGGGCAAAGGAATGTACTTTTTGTTCATAAAATCCGAGGCCAAAACCCCCGGCGGACTTGTGGCCAGGCCGGTCCTAACCAGCTACTACAAAAGCTCACATTTCAAACAAAGACCCTATGACCCTTACACTAACTACACCAGCCCCAATGAGACCATCCTCTGCCCGGACTCCTACCAAAGCATGTACTCCCAACTCCTCTGCGGTCTCTGCCAGAACAAGGAAGTCCTCCGAGTCGGTGCTGTTTTCGCCTCTGGCTTCATCCGGGCCATCAGGTTTCTTGAGAAGCACTGGACTATTTTGTGCAAGGACATAGCCTCCGGGACTCTTAACCCCCAGATTACAGACCCGTCAGTCCGCGAGGCAGTGATGAAGATCCTTAAGCCTGATCCGAAGCTTGCAAGTTTCATTGAGGGTGAGTGCCGGAAGGACTCTTGGCATGGGATTATTACCAGGCTTTGGCCAAACACAAAGTATGTGGATGTGATTGTGACCGGGACTATGTCCCAGTACATTCCGACACTGGACTATTACAGCAATGGACTGCCTCTGGTTTGCACTATGTATGCCTCTTCGGAGTGCTACTTCGGTGTTAATCTAAACCCTCTGTGCAAACCCAGTGAAGTGTCCTACACTCTTATTCCGACCATGGGATACTTTGAGTTCCTCCCAGTCCAGAGGAACAATGGGATTAATACTAATCCCGTCTCTGTCCGCAAATCACTCAATGAGAAGGAGCAGCAAGAACTAGTTGATCTTGCAGATGTGAAGCTTGGACAAGAATATGAGCTTGTTGTCACAACATATGCTGGACTGTACCGCTACAGAGTGGGGGATGTGCTAAGAGTGGCCTCATTCAAGAACAAGGCACCGCAGTTCAACTTCATATGCAGGAAAAATGTTGTCCTGAGCATTGACTCGGACAAGACTGATGAGGTGGAGCTCCAAAACGCAGTGAAAAATGCCGTGAACCATTTGGTCCCGTTCGATGCCACCGTGACGGAATATACTAGCTATGCGGACACAACAACAATCCCGGGACACTATGTGCTCTTTTGGGAACTTAGCCTCAATGGGACAACTCCAATCCCACCCTCGGTCTTTGAGGACTGTTGCCTCACCGTCGAAGAGTCCCTGAACAGCGTCTACCGGCAAGGCCGGGCCTCCGACAAGTCCATCGGACCGCTCGAGATCAAGATTGTCGAGACGGGGACGTTTGACAAGCTCATGGACTATGCCATTAGCTTGGGAGCTTCCATTAACCAATACAAGACCCCTAGGTGTGTGAAATTTGCACCCATTGTGGAGCTCTTGACCACAAGGGTGGTCTCAAACTACTATAGCCCCAAGTGCCCCAAGTGGGTCCCAGGCCACAAGCAATGGTGCAACATTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006790 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009403 GO:0009404 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009653 GO:0009700 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009826 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010120 GO:0010252 GO:0010279 GO:0016043 GO:0016049 GO:0016874 GO:0016879 GO:0016881 GO:0018130 GO:0019222 GO:0019438 GO:0019748 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032870 GO:0032989 GO:0034641 GO:0040007 GO:0042221 GO:0042430 GO:0042435 GO:0042592 GO:0042762 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043455 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046217 GO:0046483 GO:0048518 GO:0048522 GO:0048589 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051176 GO:0051716 GO:0052314 GO:0052315 GO:0052317 GO:0052318 GO:0052319 GO:0052320 GO:0052322 GO:0060560 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0071840 GO:1900376 GO:1900378 GO:1901182 GO:1901183 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

GH3

Protein Analysis

615

Amino Acids

69.63

Weight (kDa)

7.13

Isoelectric Point (pI)

40.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GH3	PF03321	25 - 333	5.1e-124	GH3 family N-terminal domain
GH3_M	PF23571	360 - 447	3.4e-30	GH3 family central domain
GH3_C	PF23572	463 - 580	1.2e-38	GH3 family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27260 AT5G54510
fragaria_vesca	FvH4_3g21460
malus_domestica	MD03G1215800.v1.1 MD11G1230400.v1.1
prunus_persica	Prupe.4G197000_v2.0.a1
pyrus_communis	pycom03g16410 pycom11g20410
rosa_chinensis	RchiOBHm_Chr5g0036891
rosa_laevigata	RLG00000033732
rosa_multiflora	Rmu_sc0007663.1_g000004
rosa_roxburghii	Rroxscaffold_1G00044060
rosa_rugosa	Rorug05G0158600
rosa_samantha	Rh5CG285100
rosa_wichuraiana	Rw5G023080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	800
AccB1I	GGYRCC	1 cut(s)	1315
AccB7I	CCANNNNNTGG	1 cut(s)	906
AccBSI	CCGCTC	1 cut(s)	1633
AccI	GTMKAC	1 cut(s)	1593
AccII	CGCG	1 cut(s)	807
AccIII	TCCGGA	1 cut(s)	338
AciI	CCGC	8 cut(s)	501, 651, 805, 1162, 1267, 1319, 1466, 1631
AclWI	GGATC	3 cut(s)	64, 817, 830
AcoI	YGGCCR	2 cut(s)	510, 908
AcsI	RAATTY	2 cut(s)	20, 1736
AcuI	CTGAAG	1 cut(s)	27
AdeI	CACNNNGTG	1 cut(s)	1495
AfaI	GTAC	5 cut(s)	164, 464, 635, 959, 1265
AfiI	CCNNNNNNNGG	8 cut(s)	109, 442, 613, 667, 906, 1097, 1543, 1807
AflII	CTTAAG	1 cut(s)	827
AgsI	TTSAA	6 cut(s)	116, 211, 371, 553, 1306, 1327
AhlI	ACTAGT	1 cut(s)	1195
AjiI	CACGTC	1 cut(s)	157
AjnI	CCWGG	3 cut(s)	512, 899, 1813
AleI	CACNNNNGTG	1 cut(s)	1769
Alw21I	GWGCWC	3 cut(s)	1392, 1500, 1758
Alw26I	GTCTC	5 cut(s)	593, 659, 1159, 1646, 1780
AlwI	GGATC	3 cut(s)	64, 817, 830
Ama87I	CYCGRG	2 cut(s)	1483, 1634
Aor13HI	TCCGGA	1 cut(s)	338
ApeKI	GCWGC	2 cut(s)	169, 1186
ApoI	RAATTY	2 cut(s)	20, 1736
AseI	ATTAAT	1 cut(s)	1140
AspA2I	CCTAGG	1 cut(s)	1724
AspLEI	GCGC	1 cut(s)	174
AspS9I	GGNCC	6 cut(s)	520, 714, 1426, 1608, 1628, 1810
AsuC2I	CCSGG	9 cut(s)	438, 498, 614, 713, 769, 943, 1484, 1485, 1607
AsuHPI	GGTGA	4 cut(s)	133, 287, 875, 1558
AvaI	CYCGRG	2 cut(s)	1483, 1634
AvaII	GGWCC	4 cut(s)	520, 1426, 1628, 1810
AvrII	CCTAGG	1 cut(s)	1724
BaeGI	GKGCMC	1 cut(s)	1802
BalI	TGGCCA	2 cut(s)	512, 910
BanI	GGYRCC	1 cut(s)	1315
BanII	GRGCYC	2 cut(s)	1392, 1758
BauI	CACGAG	1 cut(s)	107
Bbv12I	GWGCWC	3 cut(s)	1392, 1500, 1758
BbvI	GCAGC	2 cut(s)	181, 1198
BccI	CCATC	3 cut(s)	611, 725, 1631
BceAI	ACGGC	2 cut(s)	193, 1397
BciT130I	CCWGG	3 cut(s)	514, 901, 1815
BciVI	GTATCC	1 cut(s)	1094
BcnI	CCSGG	9 cut(s)	438, 498, 614, 713, 769, 943, 1484, 1485, 1607
BcoDI	GTCTC	5 cut(s)	593, 659, 1159, 1646, 1780
BcuI	ACTAGT	1 cut(s)	1195
BfaI	CTAG	4 cut(s)	380, 1196, 1458, 1725
BfmI	CTRYAG	2 cut(s)	1270, 1786
BfoI	RGCGCY	1 cut(s)	175
BfrI	CTTAAG	1 cut(s)	827
BfuI	GTATCC	1 cut(s)	1094
BisI	GCNGC	2 cut(s)	170, 1187
BlnI	CCTAGG	1 cut(s)	1724
BlsI	GCNGC	2 cut(s)	171, 1188
BmcAI	AGTACT	1 cut(s)	164
Bme18I	GGWCC	4 cut(s)	520, 1426, 1628, 1810
BmeT110I	CYCGRG	2 cut(s)	1483, 1634
BmgBI	CACGTC	1 cut(s)	157
BmgT120I	GGNCC	6 cut(s)	520, 714, 1426, 1608, 1628, 1810
BmiI	GGNNCC	4 cut(s)	1317, 1428, 1811, 1812
BmrI	ACTGGG	3 cut(s)	949, 1059, 1112
BmsI	GCATC	3 cut(s)	348, 402, 1426
BmuI	ACTGGG	3 cut(s)	949, 1059, 1112
Bpu10I	CCTNAGC	1 cut(s)	1355
BpuEI	CTTGAG	1 cut(s)	749
BpuMI	CCSGG	9 cut(s)	438, 498, 614, 713, 769, 943, 1484, 1485, 1607
BsaBI	GATNNNNATC	1 cut(s)	821
BsaI	GGTCTC	3 cut(s)	593, 659, 1780
BsaWI	WCCGGW	1 cut(s)	338
BsaXI	ACNNNNNCTCC	2 cut(s)	749, 779
Bsc4I	CCNNNNNNNGG	8 cut(s)	109, 442, 613, 667, 906, 1097, 1543, 1807
Bse118I	RCCGGY	2 cut(s)	517, 1596
Bse1I	ACTGG	9 cut(s)	247, 324, 427, 447, 743, 955, 975, 1065, 1118
Bse3DI	GCAATG	2 cut(s)	991, 1832
Bse8I	GATNNNNATC	1 cut(s)	821
BseAI	TCCGGA	1 cut(s)	338
BseBI	CCWGG	3 cut(s)	514, 901, 1815
BseGI	GGATG	5 cut(s)	335, 603, 708, 934, 1288
BseJI	GATNNNNATC	1 cut(s)	821
BseLI	CCNNNNNNNGG	8 cut(s)	109, 442, 613, 667, 906, 1097, 1543, 1807
BseMI	GCAATG	2 cut(s)	991, 1832
BseMII	CTCAG	1 cut(s)	1346
BseNI	ACTGG	9 cut(s)	247, 324, 427, 447, 743, 955, 975, 1065, 1118
BseRI	GAGGAG	3 cut(s)	389, 400, 635
BseSI	GKGCMC	1 cut(s)	1802
BseXI	GCAGC	2 cut(s)	181, 1198
Bsh1236I	CGCG	1 cut(s)	807
BshNI	GGYRCC	1 cut(s)	1315
BsiHKAI	GWGCWC	3 cut(s)	1392, 1500, 1758
BsiHKCI	CYCGRG	2 cut(s)	1483, 1634
BslI	CCNNNNNNNGG	8 cut(s)	109, 442, 613, 667, 906, 1097, 1543, 1807
BsmAI	GTCTC	5 cut(s)	593, 659, 1159, 1646, 1780
BsmBI	CGTCTC	2 cut(s)	1159, 1646
Bso31I	GGTCTC	3 cut(s)	593, 659, 1780
BsoBI	CYCGRG	2 cut(s)	1483, 1634
Bsp1286I	GDGCHC	4 cut(s)	1392, 1500, 1758, 1802
Bsp13I	TCCGGA	1 cut(s)	338
Bsp143I	GATC	5 cut(s)	69, 822, 835, 1201, 1638
Bsp19I	CCATGG	1 cut(s)	1095
BspACI	CCGC	8 cut(s)	501, 651, 805, 1162, 1267, 1319, 1466, 1631
BspCNI	CTCAG	1 cut(s)	1347
BspEI	TCCGGA	1 cut(s)	338
BspFNI	CGCG	1 cut(s)	807
BspLI	GGNNCC	4 cut(s)	1317, 1428, 1811, 1812
BspPI	GGATC	3 cut(s)	64, 817, 830
BspT107I	GGYRCC	1 cut(s)	1315
BspTI	CTTAAG	1 cut(s)	827
BspTNI	GGTCTC	3 cut(s)	593, 659, 1780
BsrBI	CCGCTC	1 cut(s)	1633
BsrDI	GCAATG	2 cut(s)	991, 1832
BsrFI	RCCGGY	2 cut(s)	517, 1596
BsrI	ACTGG	9 cut(s)	247, 324, 427, 447, 743, 955, 975, 1065, 1118
BssAI	RCCGGY	2 cut(s)	517, 1596
BssMI	GATC	5 cut(s)	69, 822, 835, 1201, 1638
BssSI	CACGAG	1 cut(s)	107
BssT1I	CCWWGG	2 cut(s)	1095, 1724
Bst2BI	CACGAG	1 cut(s)	107
Bst2UI	CCWGG	3 cut(s)	514, 901, 1815
Bst4CI	ACNGT	8 cut(s)	188, 200, 263, 404, 1263, 1444, 1559, 1570
Bst6I	CTCTTC	3 cut(s)	366, 1024, 1569
BstAFI	CTTAAG	1 cut(s)	827
BstC8I	GCNNGC	1 cut(s)	846
BstDEI	CTNAG	3 cut(s)	1289, 1355, 1511
BstDSI	CCRYGG	3 cut(s)	33, 175, 1095
BstF5I	GGATG	5 cut(s)	335, 603, 708, 934, 1288
BstFNI	CGCG	1 cut(s)	807
BstH2I	RGCGCY	1 cut(s)	175
BstHHI	GCGC	1 cut(s)	174
BstKTI	GATC	5 cut(s)	72, 825, 838, 1204, 1641
BstMAI	GTCTC	5 cut(s)	593, 659, 1159, 1646, 1780
BstMBI	GATC	5 cut(s)	69, 822, 835, 1201, 1638
BstMWI	GCNNNNNNNGC	3 cut(s)	657, 695, 1797
BstNI	CCWGG	3 cut(s)	514, 901, 1815
BstNSI	RCATGY	1 cut(s)	634
BstSFI	CTRYAG	2 cut(s)	1270, 1786
BstSLI	GKGCMC	1 cut(s)	1802
BstUI	CGCG	1 cut(s)	807
BstV1I	GCAGC	2 cut(s)	181, 1198
BstX2I	RGATCY	2 cut(s)	69, 822
BstXI	CCANNNNNNTGG	2 cut(s)	1693, 1771
BstYI	RGATCY	2 cut(s)	69, 822
BsuI	GTATCC	1 cut(s)	1094
BtgI	CCRYGG	3 cut(s)	33, 175, 1095
BtrI	CACGTC	1 cut(s)	157
BtsCI	GGATG	5 cut(s)	335, 603, 708, 934, 1288
BtsI	GCAGTG	2 cut(s)	819, 1407
BtsIMutI	CAGTG	6 cut(s)	192, 736, 819, 968, 1072, 1407
Cac8I	GCNNGC	1 cut(s)	846
CfoI	GCGC	1 cut(s)	174
Cfr10I	RCCGGY	2 cut(s)	517, 1596
Cfr13I	GGNCC	6 cut(s)	520, 714, 1426, 1608, 1628, 1810
Cfr9I	CCCGGG	1 cut(s)	1483
CpoI	CGGWCCG	1 cut(s)	1628
CseI	GACGC	1 cut(s)	1579
Csp6I	GTAC	5 cut(s)	163, 463, 634, 958, 1264
CspCI	CAANNNNNGTGG	2 cut(s)	906, 941
CspI	CGGWCCG	1 cut(s)	1628
CviAII	CATG	5 cut(s)	220, 631, 887, 1096, 1675
CviQI	GTAC	5 cut(s)	163, 463, 634, 958, 1264
DdeI	CTNAG	3 cut(s)	1289, 1355, 1511
DpnI	GATC	5 cut(s)	71, 824, 837, 1203, 1640
DpnII	GATC	5 cut(s)	69, 822, 835, 1201, 1638
DraIII	CACNNNGTG	1 cut(s)	1495
DrdI	GACNNNNNNGTC	1 cut(s)	800
DseDI	GACNNNNNNGTC	1 cut(s)	800
EaeI	YGGCCR	2 cut(s)	510, 908
Eam1104I	CTCTTC	3 cut(s)	366, 1024, 1569
EarI	CTCTTC	3 cut(s)	366, 1024, 1569
EciI	GGCGGA	1 cut(s)	516
Ecl136II	GAGCTC	2 cut(s)	1390, 1756
Eco130I	CCWWGG	2 cut(s)	1095, 1724
Eco24I	GRGCYC	2 cut(s)	1392, 1758
Eco31I	GGTCTC	3 cut(s)	593, 659, 1780
Eco32I	GATATC	2 cut(s)	244, 256
Eco47I	GGWCC	4 cut(s)	520, 1426, 1628, 1810
Eco53kI	GAGCTC	2 cut(s)	1390, 1756
Eco57I	CTGAAG	1 cut(s)	27
Eco88I	CYCGRG	2 cut(s)	1483, 1634
EcoICRI	GAGCTC	2 cut(s)	1390, 1756
EcoO109I	RGGNCCY	1 cut(s)	1810
EcoRII	CCWGG	3 cut(s)	512, 899, 1813
EcoRV	GATATC	2 cut(s)	244, 256
EcoT14I	CCWWGG	2 cut(s)	1095, 1724
EcoT38I	GRGCYC	2 cut(s)	1392, 1758
ErhI	CCWWGG	2 cut(s)	1095, 1724
Esp3I	CGTCTC	2 cut(s)	1159, 1646
FaeI	CATG	5 cut(s)	223, 634, 890, 1099, 1678
FatI	CATG	5 cut(s)	219, 630, 886, 1095, 1674
FauNDI	CATATG	2 cut(s)	1252, 1334
FblI	GTMKAC	1 cut(s)	1593
Fnu4HI	GCNGC	2 cut(s)	170, 1187
FokI	GGATG	5 cut(s)	322, 590, 695, 941, 1295
FriOI	GRGCYC	2 cut(s)	1392, 1758
Fsp4HI	GCNGC	2 cut(s)	170, 1187
FspBI	CTAG	4 cut(s)	380, 1196, 1458, 1725
GlaI	GCGC	1 cut(s)	173
GluI	GCNGC	2 cut(s)	170, 1187
HaeII	RGCGCY	1 cut(s)	175
HgaI	GACGC	1 cut(s)	1579
HhaI	GCGC	1 cut(s)	174
Hin1II	CATG	5 cut(s)	223, 634, 890, 1099, 1678
Hin6I	GCGC	1 cut(s)	172
HinP1I	GCGC	1 cut(s)	172
HindIII	AAGCTT	2 cut(s)	842, 1217
HinfI	GANTC	8 cut(s)	28, 123, 617, 681, 772, 878, 1364, 1577
HphI	GGTGA	4 cut(s)	133, 287, 875, 1558
Hpy166II	GTNNAC	2 cut(s)	1417, 1594
Hpy188III	TCNNGA	9 cut(s)	339, 728, 1123, 1306, 1354, 1636, 1642, 1651, 1759
Hpy8I	GTNNAC	2 cut(s)	1417, 1594
Hpy99I	CGWCG	2 cut(s)	161, 1574
HpyAV	CCTTC	3 cut(s)	83, 868, 1174
HpyCH4III	ACNGT	8 cut(s)	188, 200, 263, 404, 1263, 1444, 1559, 1570
HpyCH4IV	ACGT	2 cut(s)	156, 1661
HpyCH4V	TGCA	9 cut(s)	169, 753, 848, 1005, 1059, 1208, 1338, 1742, 1833
HpyF10VI	GCNNNNNNNGC	3 cut(s)	657, 695, 1797
HpyF3I	CTNAG	3 cut(s)	1289, 1355, 1511
HpySE526I	ACGT	2 cut(s)	156, 1661
Hsp92II	CATG	5 cut(s)	223, 634, 890, 1099, 1678
HspAI	GCGC	1 cut(s)	172
KflI	GGGWCCC	1 cut(s)	1810
Kpn2I	TCCGGA	1 cut(s)	338
Kzo9I	GATC	5 cut(s)	69, 822, 835, 1201, 1638
LmnI	GCTCC	6 cut(s)	376, 1183, 1387, 1395, 1697, 1753
Lsp1109I	GCAGC	2 cut(s)	181, 1198
LweI	GCATC	3 cut(s)	348, 402, 1426
MaeI	CTAG	4 cut(s)	380, 1196, 1458, 1725
MaeII	ACGT	2 cut(s)	156, 1661
MaeIII	GTNAC	7 cut(s)	91, 188, 200, 275, 937, 1243, 1444
MalI	GATC	5 cut(s)	71, 824, 837, 1203, 1640
MbiI	CCGCTC	1 cut(s)	1633
MboI	GATC	5 cut(s)	69, 822, 835, 1201, 1638
MboII	GAAGA	7 cut(s)	28, 98, 251, 383, 832, 1011, 1586
MfeI	CAATTG	1 cut(s)	366
MflI	RGATCY	2 cut(s)	69, 822
MhlI	GDGCHC	4 cut(s)	1392, 1500, 1758, 1802
MlsI	TGGCCA	2 cut(s)	512, 910
MluCI	AATT	3 cut(s)	20, 366, 1736
MluNI	TGGCCA	2 cut(s)	512, 910
MlyI	GAGTC	7 cut(s)	132, 611, 690, 766, 872, 1358, 1586
MmeI	TCCRAC	3 cut(s)	989, 1115, 1638
Mox20I	TGGCCA	2 cut(s)	512, 910
MroI	TCCGGA	1 cut(s)	338
MscI	TGGCCA	2 cut(s)	512, 910
MseI	TTAA	5 cut(s)	777, 828, 1041, 1140, 1707
MslI	CAYNNNNRTG	1 cut(s)	1769
Msp20I	TGGCCA	2 cut(s)	512, 910
MspCI	CTTAAG	1 cut(s)	827
MunI	CAATTG	1 cut(s)	366
MvaI	CCWGG	3 cut(s)	514, 901, 1815
MvnI	CGCG	1 cut(s)	807
MwoI	GCNNNNNNNGC	3 cut(s)	657, 695, 1797
NciI	CCSGG	9 cut(s)	438, 498, 614, 713, 769, 943, 1484, 1485, 1607
NcoI	CCATGG	1 cut(s)	1095
NdeI	CATATG	2 cut(s)	1252, 1334
NdeII	GATC	5 cut(s)	69, 822, 835, 1201, 1638
NlaIII	CATG	5 cut(s)	223, 634, 890, 1099, 1678
NlaIV	GGNNCC	4 cut(s)	1317, 1428, 1811, 1812
NmuCI	GTSAC	7 cut(s)	91, 188, 200, 275, 937, 1243, 1444
NspI	RCATGY	1 cut(s)	634
OliI	CACNNNNGTG	1 cut(s)	1769
PaeR7I	CTCGAG	1 cut(s)	1634
PcsI	WCGNNNNNNNCGW	2 cut(s)	1440, 1632
PfeI	GAWTC	1 cut(s)	28
PflFI	GACNNNGTC	1 cut(s)	949
PflMI	CCANNNNNTGG	1 cut(s)	906
PfoI	TCCNGGA	1 cut(s)	767
PkrI	GCNGC	2 cut(s)	171, 1188
PleI	GAGTC	7 cut(s)	131, 611, 689, 766, 872, 1358, 1585
PpsI	GAGTC	7 cut(s)	131, 611, 689, 766, 872, 1358, 1585
PpuMI	RGGWCCY	1 cut(s)	1810
PshBI	ATTAAT	1 cut(s)	1140
Psp124BI	GAGCTC	2 cut(s)	1392, 1758
Psp5II	RGGWCCY	1 cut(s)	1810
Psp6I	CCWGG	3 cut(s)	512, 899, 1813
PspGI	CCWGG	3 cut(s)	512, 899, 1813
PspN4I	GGNNCC	4 cut(s)	1317, 1428, 1811, 1812
PspPI	GGNCC	6 cut(s)	520, 714, 1426, 1608, 1628, 1810
PspPPI	RGGWCCY	1 cut(s)	1810
PsrI	GAACNNNNNNTAC	4 cut(s)	455, 487, 1577, 1609
PsuI	RGATCY	2 cut(s)	69, 822
PsyI	GACNNNGTC	1 cut(s)	949
RsaI	GTAC	5 cut(s)	164, 464, 635, 959, 1265
RsaNI	GTAC	5 cut(s)	163, 463, 634, 958, 1264
RseI	CAYNNNNRTG	1 cut(s)	1769
Rsr2I	CGGWCCG	1 cut(s)	1628
RsrII	CGGWCCG	1 cut(s)	1628
SacI	GAGCTC	2 cut(s)	1392, 1758
SaqAI	TTAA	5 cut(s)	777, 828, 1041, 1140, 1707
SatI	GCNGC	2 cut(s)	170, 1187
Sau3AI	GATC	5 cut(s)	69, 822, 835, 1201, 1638
Sau96I	GGNCC	6 cut(s)	520, 714, 1426, 1608, 1628, 1810
ScaI	AGTACT	1 cut(s)	164
SchI	GAGTC	7 cut(s)	132, 611, 690, 766, 872, 1358, 1586
SduI	GDGCHC	4 cut(s)	1392, 1500, 1758, 1802
SfaNI	GCATC	3 cut(s)	348, 402, 1426
SfcI	CTRYAG	2 cut(s)	1270, 1786
Sfr274I	CTCGAG	1 cut(s)	1634
SinI	GGWCC	4 cut(s)	520, 1426, 1628, 1810
SlaI	CTCGAG	1 cut(s)	1634
SmaI	CCCGGG	1 cut(s)	1485
SmiMI	CAYNNNNRTG	1 cut(s)	1769
SmlI	CTYRAG	3 cut(s)	728, 827, 1634
SmoI	CTYRAG	3 cut(s)	728, 827, 1634
SpeI	ACTAGT	1 cut(s)	1195
Sse9I	AATT	3 cut(s)	20, 366, 1736
SsiI	CCGC	8 cut(s)	501, 651, 805, 1162, 1267, 1319, 1466, 1631
SspMI	CTAG	4 cut(s)	380, 1196, 1458, 1725
SstI	GAGCTC	2 cut(s)	1392, 1758
StyI	CCWWGG	2 cut(s)	1095, 1724
TaaI	ACNGT	8 cut(s)	188, 200, 263, 404, 1263, 1444, 1559, 1570
TaiI	ACGT	2 cut(s)	159, 1664
TaqI	TCGA	6 cut(s)	84, 159, 1434, 1572, 1635, 1650
TaqII	GACCGA	1 cut(s)	1534
TasI	AATT	3 cut(s)	20, 366, 1736
TatI	WGTACW	4 cut(s)	162, 462, 633, 957
TfiI	GAWTC	1 cut(s)	28
Tru1I	TTAA	5 cut(s)	777, 828, 1041, 1140, 1707
Tru9I	TTAA	5 cut(s)	777, 828, 1041, 1140, 1707
TscAI	CASTG	6 cut(s)	199, 743, 819, 975, 1072, 1407
TseFI	GTSAC	7 cut(s)	91, 188, 200, 275, 937, 1243, 1444
TseI	GCWGC	2 cut(s)	169, 1186
Tsp45I	GTSAC	7 cut(s)	91, 188, 200, 275, 937, 1243, 1444
TspDTI	ATGAA	6 cut(s)	70, 463, 697, 833, 844, 1321
TspGWI	ACGGA	2 cut(s)	50, 1463
TspMI	CCCGGG	1 cut(s)	1483
TspRI	CASTG	6 cut(s)	199, 743, 819, 975, 1072, 1407
Tth111I	GACNNNGTC	1 cut(s)	949
Van91I	CCANNNNNTGG	1 cut(s)	906
Vha464I	CTTAAG	1 cut(s)	827
VpaK11BI	GGWCC	4 cut(s)	520, 1426, 1628, 1810
VspI	ATTAAT	1 cut(s)	1140
XapI	RAATTY	2 cut(s)	20, 1736
XceI	RCATGY	1 cut(s)	634
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1130
XhoI	CTCGAG	1 cut(s)	1634
XmaI	CCCGGG	1 cut(s)	1483
XmaJI	CCTAGG	1 cut(s)	1724
XmiI	GTMKAC	1 cut(s)	1593
XspI	CTAG	4 cut(s)	380, 1196, 1458, 1725
ZrmI	AGTACT	1 cut(s)	164

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.