Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0015833

Physical Location & Seq

Genomic Coordinates Forward (+)

31265648 .. 31268069

Gene Structure 2422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG285100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGCCTGAAGCTCCAAAAAACTCTCTGGAACAGAAGAACGAAGAGGCTCTCAAGTTCATCGAGAGTGTCACAGAAAACGCTGATGAGGTCCAGAAGCGTGTTCTGGGTGAAATCCTAGCTGCGAATGCTCATGTTGAGTATCTGCAGCGACACGGCCTCGATGGTCACACTGACCGTGAGACTTTCAAGAAAATCATGCCTGTTATCACCTACGACCATATCCAGCCTGACATCAACCGTATCGCAAATGGCGACACTTCCCAAATCCTCTGCTCAAAACCCATTTCGGAGTTTTTGACAAGCTCTGGGACATCTGGAGGGGAGAGGAAATTGATGCCAACAATTGAAGAAGAGCTGGAGAGGAGGTCACTGCTCTATAGCCTATTGATGCCTGTGATGAGCCAATATGTGCCTGAATTAGAAAAGGGCAAGGGAATGTACTTTTTGTTCATAAAATCTGAGGCCAAAACACCTGGGGGCCTTGTGGCTCGTCCAGTGCTCACTAGCTATTACAAAAGCTCTCATTTCAAGCAAAGGCCTTATGACCCTTACACAAACTACACCAGCCCAAATGAGACCATTCTCTGCCCTGACTCCTACCAAAGCATGTACTCCCAATTGCTCTGTGGCCTTTGCCAGAACAAAGAAGTCCTCCGAGTTGGCGCTGTTTTCGCCTCCGGATTTATCCGAGCCATTCGCTTTCTCGAGAAGCATTGGCCTATTCTATGCAAGGACATAGAATTCGGGACTCTTAACCCCCAAATCACCGACCCATCGGTCCGGGAATCGGTCTTGAAAATCCTCAAACCGGACCCGAAGCTAGCCGGTTTCATTGCCACCGAGTGTGGGAAGAAATCATGGCAAGGGATCATAACAAGGCTGTGGCCTAACACAAAGTATGTGGATGTTATAGTGACTGGCACTATGTCACAGTACATTCCTACTTTGGATTACTACAGCAATGGGCTTCCTCTGGTTTGCACCATGTATGCTTCCTCTGAGTGCTATTTTGGTGTCAATCTCAACCCAATGTGCAGACCCAGTGAGGTTTCTTACACCCTCATTCCCACTATGTGCTACTTCGAGTTCCTCCCTGTTCACAGAAACAATGGGGTCAACTCGGATTCGGTGTCTGTACCCGAATCGCTCAATGAGAAGGAGCAGCAACAGCTGGTGGATCTTGTTGATGTGAAGCTAGGACAAGAATATGAGCTTGTTGTCACAACCTATGCTGGGCTTTACCGCTACAGAGTTGGAGATGTGCTAAGAGTGGCAGGGTTCAAGAACAAGGCTCCGCAATTCAACTTCATCTGCAGGAAAAACGTGGTTCTAAGCATTGATTCAGACAAGACTGATGAGGTTGAGCTCCAAAACGCTGTGAAGTATGCTGTGACCCATTTGGTGCCGTTTGATGCAACTGTGGCAGAGTACACTAGCTATGCTGACACTTCAACAGTTCCAGGCCACTATGTGCTTTTCTGGGAGCTTAGTCTAAATGGCTCAACTCCAATCCCACCCTCAGTGTTTGAGGACTGCTGCTTGGCCATTGAGGAGTCACTCAACAGTGTGTACCGCCAAGGCAGAGTCTCCGACAAATCAATCGGGCCGCTGGAGATCAAGATTGTTGAGGCTGGGACTTTTGACAAGCTCATGGACTATGCTATAAGCTTGGGAGCTTCCATTAACCAATACAAGACCCCAAGGTGTGTGAAGTTTGCACCCATTGTTGAGCTCTTGAACTCTAGGGTGGTCTCAAACTACTTCAGTCCCAAGTGCCCCAAATGGGCCCCTGGCCACAAGCAATGGTGCAATAACCATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006790 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009403 GO:0009404 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009653 GO:0009700 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009826 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010120 GO:0010252 GO:0010279 GO:0016043 GO:0016049 GO:0016874 GO:0016879 GO:0016881 GO:0018130 GO:0019222 GO:0019438 GO:0019748 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032870 GO:0032989 GO:0034641 GO:0040007 GO:0042221 GO:0042430 GO:0042435 GO:0042592 GO:0042762 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043455 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046217 GO:0046483 GO:0048518 GO:0048522 GO:0048589 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051176 GO:0051716 GO:0052314 GO:0052315 GO:0052317 GO:0052318 GO:0052319 GO:0052320 GO:0052322 GO:0060560 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0071840 GO:1900376 GO:1900378 GO:1901182 GO:1901183 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

GH3

Protein Analysis

607

Amino Acids

68.46

Weight (kDa)

5.88

Isoelectric Point (pI)

44.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GH3	PF03321	17 - 325	5e-123	GH3 family N-terminal domain
GH3_M	PF23571	352 - 439	1.4e-30	GH3 family central domain
GH3_C	PF23572	455 - 572	2.9e-38	GH3 family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27260 AT5G54510
fragaria_vesca	FvH4_3g21460
malus_domestica	MD03G1215800.v1.1 MD11G1230400.v1.1
prunus_persica	Prupe.4G197000_v2.0.a1
pyrus_communis	pycom03g16410 pycom11g20410
rosa_chinensis	RchiOBHm_Chr5g0036891
rosa_laevigata	RLG00000033732
rosa_multiflora	Rmu_sc0007663.1_g000004
rosa_roxburghii	Rroxscaffold_1G00044060
rosa_rugosa	Rorug05G0158600
rosa_samantha	Rh5CG285100
rosa_wichuraiana	Rw5G023080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	776
AccB1I	GGYRCC	1 cut(s)	1402
AccIII	TCCGGA	1 cut(s)	677
AciI	CCGC	4 cut(s)	1243, 1295, 1573, 1607
AclWI	GGATC	2 cut(s)	875, 1185
AcoI	YGGCCR	2 cut(s)	1542, 1792
AcsI	RAATTY	1 cut(s)	740
AcuI	CTGAAG	2 cut(s)	27, 1747
AdeI	CACNNNGTG	3 cut(s)	843, 1074, 1471
AfaI	GTAC	6 cut(s)	440, 611, 935, 1137, 1430, 1571
AfiI	CCNNNNNNNGG	5 cut(s)	787, 808, 846, 1233, 1783
AgsI	TTSAA	8 cut(s)	187, 347, 529, 796, 1282, 1303, 1452, 1738
AjnI	CCWGG	3 cut(s)	472, 1459, 1789
Alw21I	GWGCWC	3 cut(s)	501, 1368, 1734
Alw26I	GTCTC	4 cut(s)	173, 569, 1591, 1756
AlwI	GGATC	2 cut(s)	875, 1185
Ama87I	CYCGRG	1 cut(s)	704
Aor13HI	TCCGGA	1 cut(s)	677
ApaI	GGGCCC	1 cut(s)	1789
ApeKI	GCWGC	4 cut(s)	119, 145, 1162, 1536
ApoI	RAATTY	1 cut(s)	740
ArsI	GACNNNNNNTTYG	2 cut(s)	725, 757
AspLEI	GCGC	1 cut(s)	665
AspS9I	GGNCC	7 cut(s)	88, 478, 778, 811, 1604, 1785, 1786
AsuC2I	CCSGG	1 cut(s)	782
AsuHPI	GGTGA	3 cut(s)	119, 199, 757
AsuNHI	GCTAGC	1 cut(s)	820
AvaI	CYCGRG	1 cut(s)	704
AvaII	GGWCC	3 cut(s)	88, 778, 811
BaeGI	GKGCMC	2 cut(s)	1778, 1789
BalI	TGGCCA	2 cut(s)	1544, 1794
BanI	GGYRCC	1 cut(s)	1402
BanII	GRGCYC	3 cut(s)	1368, 1734, 1789
Bbv12I	GWGCWC	3 cut(s)	501, 1368, 1734
BbvI	GCAGC	4 cut(s)	106, 157, 1174, 1523
BccI	CCATC	2 cut(s)	155, 781
BceAI	ACGGC	2 cut(s)	169, 1390
BciT130I	CCWGG	3 cut(s)	474, 1461, 1791
BcnI	CCSGG	1 cut(s)	782
BcoDI	GTCTC	4 cut(s)	173, 569, 1591, 1756
BfaI	CTAG	6 cut(s)	116, 504, 821, 1196, 1434, 1743
BfmI	CTRYAG	5 cut(s)	143, 376, 955, 1246, 1312
BfoI	RGCGCY	1 cut(s)	666
BisI	GCNGC	5 cut(s)	120, 146, 1163, 1537, 1607
BlsI	GCNGC	5 cut(s)	121, 147, 1164, 1538, 1608
Bme1390I	CCNGG	4 cut(s)	474, 782, 1461, 1791
Bme18I	GGWCC	3 cut(s)	88, 778, 811
BmeT110I	CYCGRG	1 cut(s)	704
BmgT120I	GGNCC	7 cut(s)	88, 478, 778, 811, 1604, 1785, 1786
BmiI	GGNNCC	6 cut(s)	479, 813, 1293, 1404, 1787, 1788
BmrFI	CCNGG	4 cut(s)	474, 782, 1461, 1791
BmrI	ACTGGG	1 cut(s)	1035
BmsI	GCATC	3 cut(s)	324, 378, 1402
BmtI	GCTAGC	1 cut(s)	824
BmuI	ACTGGG	1 cut(s)	1035
BpmI	CTGGAG	3 cut(s)	336, 377, 1631
BpuEI	CTTGAG	1 cut(s)	35
BpuMI	CCSGG	1 cut(s)	782
BsaI	GGTCTC	2 cut(s)	569, 1756
BsaJI	CCNNGG	4 cut(s)	473, 1576, 1700, 1789
BsaWI	WCCGGW	2 cut(s)	677, 808
BsaXI	ACNNNNNCTCC	2 cut(s)	350, 380
Bsc4I	CCNNNNNNNGG	5 cut(s)	787, 808, 846, 1233, 1783
Bse118I	RCCGGY	1 cut(s)	824
Bse1I	ACTGG	3 cut(s)	494, 922, 1041
Bse3DI	GCAATG	3 cut(s)	831, 967, 1808
BseAI	TCCGGA	1 cut(s)	677
BseBI	CCWGG	3 cut(s)	474, 1461, 1791
BseDI	CCNNGG	4 cut(s)	473, 1576, 1700, 1789
BseGI	GGATG	1 cut(s)	910
BseLI	CCNNNNNNNGG	5 cut(s)	787, 808, 846, 1233, 1783
BseMI	GCAATG	3 cut(s)	831, 967, 1808
BseMII	CTCAG	3 cut(s)	450, 990, 1533
BseNI	ACTGG	3 cut(s)	494, 922, 1041
BseRI	GAGGAG	2 cut(s)	376, 1565
BseSI	GKGCMC	2 cut(s)	1778, 1789
BseXI	GCAGC	4 cut(s)	106, 157, 1174, 1523
BseYI	CCCAGC	2 cut(s)	1232, 1631
BsgI	GTGCAG	1 cut(s)	1054
BshNI	GGYRCC	1 cut(s)	1402
BsiHKAI	GWGCWC	3 cut(s)	501, 1368, 1734
BsiHKCI	CYCGRG	1 cut(s)	704
BsiSI	CCGG	4 cut(s)	678, 781, 809, 825
BslFI	GGGAC	4 cut(s)	322, 760, 1648, 1752
BslI	CCNNNNNNNGG	5 cut(s)	787, 808, 846, 1233, 1783
BsmAI	GTCTC	4 cut(s)	173, 569, 1591, 1756
BsmFI	GGGAC	4 cut(s)	322, 760, 1648, 1752
BsmI	GAATGC	1 cut(s)	130
Bso31I	GGTCTC	2 cut(s)	569, 1756
BsoBI	CYCGRG	1 cut(s)	704
Bsp120I	GGGCCC	1 cut(s)	1785
Bsp1286I	GDGCHC	5 cut(s)	501, 1368, 1734, 1778, 1789
Bsp13I	TCCGGA	1 cut(s)	677
Bsp143I	GATC	3 cut(s)	867, 1177, 1614
BspACI	CCGC	4 cut(s)	1243, 1295, 1573, 1607
BspCNI	CTCAG	3 cut(s)	451, 991, 1532
BspEI	TCCGGA	1 cut(s)	677
BspLI	GGNNCC	6 cut(s)	479, 813, 1293, 1404, 1787, 1788
BspMAI	CTGCAG	2 cut(s)	147, 1316
BspOI	GCTAGC	1 cut(s)	824
BspPI	GGATC	2 cut(s)	875, 1185
BspQI	GCTCTTC	1 cut(s)	345
BspT107I	GGYRCC	1 cut(s)	1402
BspTNI	GGTCTC	2 cut(s)	569, 1756
BsrDI	GCAATG	3 cut(s)	831, 967, 1808
BsrFI	RCCGGY	1 cut(s)	824
BsrI	ACTGG	3 cut(s)	494, 922, 1041
BssAI	RCCGGY	1 cut(s)	824
BssECI	CCNNGG	4 cut(s)	473, 1576, 1700, 1789
BssMI	GATC	3 cut(s)	867, 1177, 1614
BssT1I	CCWWGG	2 cut(s)	1576, 1700
Bst2UI	CCWGG	3 cut(s)	474, 1461, 1791
Bst4CI	ACNGT	6 cut(s)	176, 239, 933, 1420, 1456, 1565
Bst6I	CTCTTC	2 cut(s)	36, 345
BstC8I	GCNNGC	1 cut(s)	822
BstDEI	CTNAG	6 cut(s)	459, 999, 1265, 1331, 1487, 1519
BstF5I	GGATG	1 cut(s)	910
BstH2I	RGCGCY	1 cut(s)	666
BstHHI	GCGC	1 cut(s)	665
BstKTI	GATC	3 cut(s)	870, 1180, 1617
BstMAI	GTCTC	4 cut(s)	173, 569, 1591, 1756
BstMBI	GATC	3 cut(s)	867, 1177, 1614
BstMWI	GCNNNNNNNGC	4 cut(s)	125, 671, 1168, 1421
BstNI	CCWGG	3 cut(s)	474, 1461, 1791
BstNSI	RCATGY	1 cut(s)	610
BstSCI	CCNGG	4 cut(s)	472, 780, 1459, 1789
BstSFI	CTRYAG	5 cut(s)	143, 376, 955, 1246, 1312
BstSLI	GKGCMC	2 cut(s)	1778, 1789
BstV1I	GCAGC	4 cut(s)	106, 157, 1174, 1523
BstX2I	RGATCY	1 cut(s)	1177
BstYI	RGATCY	1 cut(s)	1177
BtsCI	GGATG	1 cut(s)	910
BtsI	GCAGTG	1 cut(s)	368
BtsIMutI	CAGTG	6 cut(s)	168, 368, 501, 1048, 1527, 1570
Cac8I	GCNNGC	1 cut(s)	822
CfoI	GCGC	1 cut(s)	665
Cfr10I	RCCGGY	1 cut(s)	824
Cfr13I	GGNCC	7 cut(s)	88, 478, 778, 811, 1604, 1785, 1786
CpoI	CGGWCCG	1 cut(s)	778
Csp6I	GTAC	6 cut(s)	439, 610, 934, 1136, 1429, 1570
CspCI	CAANNNNNGTGG	2 cut(s)	882, 917
CspI	CGGWCCG	1 cut(s)	778
CviAII	CATG	7 cut(s)	131, 196, 607, 858, 985, 1651, 1817
CviQI	GTAC	6 cut(s)	439, 610, 934, 1136, 1429, 1570
DdeI	CTNAG	6 cut(s)	459, 999, 1265, 1331, 1487, 1519
DpnI	GATC	3 cut(s)	869, 1179, 1616
DpnII	GATC	3 cut(s)	867, 1177, 1614
DraIII	CACNNNGTG	3 cut(s)	843, 1074, 1471
DrdI	GACNNNNNNGTC	1 cut(s)	776
DseDI	GACNNNNNNGTC	1 cut(s)	776
EaeI	YGGCCR	2 cut(s)	1542, 1792
Eam1104I	CTCTTC	2 cut(s)	36, 345
EarI	CTCTTC	2 cut(s)	36, 345
Ecl136II	GAGCTC	2 cut(s)	1366, 1732
Eco130I	CCWWGG	2 cut(s)	1576, 1700
Eco147I	AGGCCT	1 cut(s)	538
Eco24I	GRGCYC	3 cut(s)	1368, 1734, 1789
Eco31I	GGTCTC	2 cut(s)	569, 1756
Eco47I	GGWCC	3 cut(s)	88, 778, 811
Eco53kI	GAGCTC	2 cut(s)	1366, 1732
Eco57I	CTGAAG	2 cut(s)	27, 1747
Eco88I	CYCGRG	1 cut(s)	704
EcoICRI	GAGCTC	2 cut(s)	1366, 1732
EcoO109I	RGGNCCY	2 cut(s)	478, 1786
EcoRI	GAATTC	1 cut(s)	740
EcoRII	CCWGG	3 cut(s)	472, 1459, 1789
EcoT14I	CCWWGG	2 cut(s)	1576, 1700
EcoT38I	GRGCYC	3 cut(s)	1368, 1734, 1789
ErhI	CCWWGG	2 cut(s)	1576, 1700
FaeI	CATG	7 cut(s)	134, 199, 610, 861, 988, 1654, 1820
FaqI	GGGAC	4 cut(s)	322, 760, 1648, 1752
FatI	CATG	7 cut(s)	130, 195, 606, 857, 984, 1650, 1816
Fnu4HI	GCNGC	5 cut(s)	120, 146, 1163, 1537, 1607
FokI	GGATG	1 cut(s)	917
FriOI	GRGCYC	3 cut(s)	1368, 1734, 1789
Fsp4HI	GCNGC	5 cut(s)	120, 146, 1163, 1537, 1607
FspBI	CTAG	6 cut(s)	116, 504, 821, 1196, 1434, 1743
GlaI	GCGC	1 cut(s)	664
GluI	GCNGC	5 cut(s)	120, 146, 1163, 1537, 1607
GsaI	CCCAGC	2 cut(s)	1236, 1635
GsuI	CTGGAG	3 cut(s)	336, 377, 1631
HaeII	RGCGCY	1 cut(s)	666
HapII	CCGG	4 cut(s)	678, 781, 809, 825
HhaI	GCGC	1 cut(s)	665
Hin1II	CATG	7 cut(s)	134, 199, 610, 861, 988, 1654, 1820
Hin6I	GCGC	1 cut(s)	663
HinP1I	GCGC	1 cut(s)	663
HincII	GTYRAC	1 cut(s)	1117
HindII	GTYRAC	1 cut(s)	1117
HindIII	AAGCTT	1 cut(s)	1666
HinfI	GANTC	8 cut(s)	593, 748, 785, 1124, 1142, 1340, 1553, 1584
HpaII	CCGG	4 cut(s)	678, 781, 809, 825
HphI	GGTGA	3 cut(s)	119, 199, 757
Hpy166II	GTNNAC	4 cut(s)	1099, 1117, 1431, 1570
Hpy188I	TCNGA	8 cut(s)	289, 460, 656, 689, 1000, 1123, 1345, 1591
Hpy8I	GTNNAC	4 cut(s)	1099, 1117, 1431, 1570
HpyAV	CCTTC	1 cut(s)	1150
HpyCH4III	ACNGT	6 cut(s)	176, 239, 933, 1420, 1456, 1565
HpyCH4IV	ACGT	1 cut(s)	1323
HpyCH4V	TGCA	8 cut(s)	145, 729, 981, 1035, 1314, 1415, 1718, 1809
HpyF10VI	GCNNNNNNNGC	4 cut(s)	125, 671, 1168, 1421
HpyF3I	CTNAG	6 cut(s)	459, 999, 1265, 1331, 1487, 1519
HpySE526I	ACGT	1 cut(s)	1323
Hsp92II	CATG	7 cut(s)	134, 199, 610, 861, 988, 1654, 1820
HspAI	GCGC	1 cut(s)	663
Kpn2I	TCCGGA	1 cut(s)	677
Kzo9I	GATC	3 cut(s)	867, 1177, 1614
LguI	GCTCTTC	1 cut(s)	345
LmnI	GCTCC	6 cut(s)	16, 1159, 1297, 1371, 1483, 1673
Lsp1109I	GCAGC	4 cut(s)	106, 157, 1174, 1523
LweI	GCATC	3 cut(s)	324, 378, 1402
MaeI	CTAG	6 cut(s)	116, 504, 821, 1196, 1434, 1743
MaeII	ACGT	1 cut(s)	1323
MaeIII	GTNAC	8 cut(s)	67, 164, 366, 913, 927, 1219, 1390, 1554
MalI	GATC	3 cut(s)	869, 1179, 1616
MboI	GATC	3 cut(s)	867, 1177, 1614
MboII	GAAGA	5 cut(s)	46, 53, 359, 362, 862
MfeI	CAATTG	2 cut(s)	342, 617
MflI	RGATCY	1 cut(s)	1177
MhlI	GDGCHC	5 cut(s)	501, 1368, 1734, 1778, 1789
MlsI	TGGCCA	2 cut(s)	1544, 1794
MluCI	AATT	6 cut(s)	329, 342, 416, 617, 740, 1298
MluNI	TGGCCA	2 cut(s)	1544, 1794
MlyI	GAGTC	4 cut(s)	587, 742, 1562, 1593
MmeI	TCCRAC	2 cut(s)	1234, 1614
Mox20I	TGGCCA	2 cut(s)	1544, 1794
MroI	TCCGGA	1 cut(s)	677
MscI	TGGCCA	2 cut(s)	1544, 1794
MseI	TTAA	2 cut(s)	753, 1683
Msp20I	TGGCCA	2 cut(s)	1544, 1794
MspA1I	CMGCKG	2 cut(s)	1171, 1609
MspI	CCGG	4 cut(s)	678, 781, 809, 825
MspR9I	CCNGG	4 cut(s)	474, 782, 1461, 1791
MunI	CAATTG	2 cut(s)	342, 617
Mva1269I	GAATGC	1 cut(s)	130
MvaI	CCWGG	3 cut(s)	474, 1461, 1791
MwoI	GCNNNNNNNGC	4 cut(s)	125, 671, 1168, 1421
NciI	CCSGG	1 cut(s)	782
NdeII	GATC	3 cut(s)	867, 1177, 1614
NheI	GCTAGC	1 cut(s)	820
NlaIII	CATG	7 cut(s)	134, 199, 610, 861, 988, 1654, 1820
NlaIV	GGNNCC	6 cut(s)	479, 813, 1293, 1404, 1787, 1788
NmuCI	GTSAC	8 cut(s)	67, 164, 366, 913, 927, 1219, 1390, 1554
NspI	RCATGY	1 cut(s)	610
PaeR7I	CTCGAG	1 cut(s)	704
PceI	AGGCCT	1 cut(s)	538
PciSI	GCTCTTC	1 cut(s)	345
PcsI	WCGNNNNNNNCGW	1 cut(s)	249
PctI	GAATGC	1 cut(s)	130
PfeI	GAWTC	4 cut(s)	785, 1124, 1142, 1340
PfoI	TCCNGGA	1 cut(s)	780
PkrI	GCNGC	5 cut(s)	121, 147, 1164, 1538, 1608
PleI	GAGTC	4 cut(s)	587, 742, 1561, 1592
PpsI	GAGTC	4 cut(s)	587, 742, 1561, 1592
Psp124BI	GAGCTC	2 cut(s)	1368, 1734
Psp6I	CCWGG	3 cut(s)	472, 1459, 1789
PspFI	CCCAGC	2 cut(s)	1232, 1631
PspGI	CCWGG	3 cut(s)	472, 1459, 1789
PspN4I	GGNNCC	6 cut(s)	479, 813, 1293, 1404, 1787, 1788
PspOMI	GGGCCC	1 cut(s)	1785
PspPI	GGNCC	7 cut(s)	88, 478, 778, 811, 1604, 1785, 1786
PsrI	GAACNNNNNNTAC	2 cut(s)	431, 463
PstI	CTGCAG	2 cut(s)	147, 1316
PsuI	RGATCY	1 cut(s)	1177
PvuII	CAGCTG	1 cut(s)	1171
RsaI	GTAC	6 cut(s)	440, 611, 935, 1137, 1430, 1571
RsaNI	GTAC	6 cut(s)	439, 610, 934, 1136, 1429, 1570
Rsr2I	CGGWCCG	1 cut(s)	778
RsrII	CGGWCCG	1 cut(s)	778
SacI	GAGCTC	2 cut(s)	1368, 1734
SapI	GCTCTTC	1 cut(s)	345
SaqAI	TTAA	2 cut(s)	753, 1683
SatI	GCNGC	5 cut(s)	120, 146, 1163, 1537, 1607
Sau3AI	GATC	3 cut(s)	867, 1177, 1614
Sau96I	GGNCC	7 cut(s)	88, 478, 778, 811, 1604, 1785, 1786
SchI	GAGTC	4 cut(s)	587, 742, 1562, 1593
ScrFI	CCNGG	4 cut(s)	474, 782, 1461, 1791
SduI	GDGCHC	5 cut(s)	501, 1368, 1734, 1778, 1789
SfaNI	GCATC	3 cut(s)	324, 378, 1402
SfcI	CTRYAG	5 cut(s)	143, 376, 955, 1246, 1312
Sfr274I	CTCGAG	1 cut(s)	704
SinI	GGWCC	3 cut(s)	88, 778, 811
SlaI	CTCGAG	1 cut(s)	704
SmlI	CTYRAG	2 cut(s)	50, 704
SmoI	CTYRAG	2 cut(s)	50, 704
Sse9I	AATT	6 cut(s)	329, 342, 416, 617, 740, 1298
SseBI	AGGCCT	1 cut(s)	538
SsiI	CCGC	4 cut(s)	1243, 1295, 1573, 1607
SspMI	CTAG	6 cut(s)	116, 504, 821, 1196, 1434, 1743
SstI	GAGCTC	2 cut(s)	1368, 1734
StuI	AGGCCT	1 cut(s)	538
StyD4I	CCNGG	4 cut(s)	472, 780, 1459, 1789
StyI	CCWWGG	2 cut(s)	1576, 1700
TaaI	ACNGT	6 cut(s)	176, 239, 933, 1420, 1456, 1565
TaiI	ACGT	1 cut(s)	1326
TaqI	TCGA	4 cut(s)	60, 159, 705, 1083
TaqII	GACCGA	2 cut(s)	766, 778
TasI	AATT	6 cut(s)	329, 342, 416, 617, 740, 1298
TatI	WGTACW	4 cut(s)	438, 609, 933, 1428
TauI	GCSGC	1 cut(s)	1609
TfiI	GAWTC	4 cut(s)	785, 1124, 1142, 1340
Tru1I	TTAA	2 cut(s)	753, 1683
Tru9I	TTAA	2 cut(s)	753, 1683
TscAI	CASTG	6 cut(s)	175, 375, 501, 1048, 1527, 1570
TseFI	GTSAC	8 cut(s)	67, 164, 366, 913, 927, 1219, 1390, 1554
TseI	GCWGC	4 cut(s)	119, 145, 1162, 1536
Tsp45I	GTSAC	8 cut(s)	67, 164, 366, 913, 927, 1219, 1390, 1554
TspDTI	ATGAA	4 cut(s)	46, 439, 820, 1297
TspRI	CASTG	6 cut(s)	175, 375, 501, 1048, 1527, 1570
VpaK11BI	GGWCC	3 cut(s)	88, 778, 811
XapI	RAATTY	1 cut(s)	740
XceI	RCATGY	1 cut(s)	610
XcmI	CCANNNNNNNNNTGG	1 cut(s)	623
XhoI	CTCGAG	1 cut(s)	704
XspI	CTAG	6 cut(s)	116, 504, 821, 1196, 1434, 1743

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.