AT4G29130

Belongs to the hexokinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0010710
Physical Location & Seq
Reverse (-)
14352037 .. 14355201
3165 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G29130.1

Sequence Viewer

Length: 1491 bp
ATGGGTAAAGTAGCTGTTGGAGCGACTGTTGTTTGCACGGCGGCGGTTTGTGCGGTGGCTGTTTTGGTTGTTCGACGACGGATGCAGAGCTCAGGGAAGTGGGGACGTGTTTTGGCTATCCTCAAGGCCTTTGAAGAGGATTGTGCGACTCCGATCTCGAAACTGAGACAAGTGGCTGATGCTATGACCGTTGAGATGCATGCTGGTCTTGCATCCGACGGTGGTAGCAAACTCAAGATGCTTATCAGCTACGTTGATAATCTTCCTTCCGGGGATGAAAAGGGTCTCTTTTATGCATTGGACCTAGGGGGGACAAACTTCCGTGTCATGCGTGTGCTTCTTGGCGGGAAGCAAGAGCGTGTTGTTAAACAAGAATTCGAAGAAGTTTCGATTCCTCCTCATTTGATGACTGGTGGTTCAGATGAGTTGTTCAATTTTATAGCTGAAGCTCTTGCGAAGTTTGTCGCTACAGAATGCGAAGACTTTCATCTTCCAGAAGGTAGACAGAGGGAATTAGGTTTCACTTTCTCGTTTCCTGTTAAGCAGACTTCTCTGTCCTCTGGTAGTCTCATCAAATGGACAAAAGGCTTTTCCATCGAAGAAGCAGTTGGACAAGATGTTGTTGGAGCACTTAATAAGGCTCTGGAAAGAGTTGGTCTTGACATGCGAATCGCAGCACTTGTTAATGATACCGTTGGAACACTAGCCGGTGGTAGATACTATAACCCGGATGTTGTTGCTGCTGTTATTTTAGGCACTGGGACAAACGCAGCCTATGTTGAGCGTGCAACCGCGATCCCTAAATGGCATGGTCTGCTTCCAAAATCAGGAGAAATGGTTATAAACATGGAATGGGGAAACTTCAGGTCATCACATCTTCCATTAACCGAGTTTGATCACACGCTGGATTTCGAGAGTCTGAATCCAGGCGAACAGATTCTTGAGAAAATCATTTCCGGTATGTACTTGGGAGAGATTTTGCGAAGAGTTCTTCTAAAGATGGCTGAAGATGCTGCTTTCTTTGGCGATACAGTCCCATCTAAGCTGAGAATACCATTCATCATTAGGACTCCTCACATGTCGGCTATGCACAACGACACTTCTCCAGACTTGAAGATTGTTGGGAGCAAGATTAAGGATATATTGGAGGTCCCTACAACTTCTCTGAAAATGAGAAAAGTTGTGATCAGTCTCTGCAACATCATAGCAACCCGAGGAGCTCGTCTCTCTGCTGCTGGAATCTATGGTATTCTGAAGAAACTGGGAAGAGATACTACTAAAGACGAGGAGGTGCAGAAATCGGTTATAGCCATGGATGGTGGATTGTTTGAGCATTACACTCAGTTTAGTGAGTGTATGGAGAGCTCACTAAAAGAGTTGCTTGGAGATGAAGCTTCAGGAAGCGTTGAAGTCACTCACTCCAATGATGGATCAGGCATTGGAGCTGCGCTTCTTGCTGCTTCTCACTCTCTCTACCTTGAAGACTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001047 GO:0001067 GO:0001678 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004340 GO:0004396 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005773 GO:0005774 GO:0005829 GO:0005975 GO:0005996 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006355 GO:0006357 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006833 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0008270 GO:0008865 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009536 GO:0009743 GO:0009746 GO:0009747 GO:0009749 GO:0009756 GO:0009757 GO:0009889 GO:0009987 GO:0010033 GO:0010118 GO:0010148 GO:0010182 GO:0010255 GO:0010468 GO:0010556 GO:0012501 GO:0016020 GO:0016021 GO:0016052 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019158 GO:0019200 GO:0019219 GO:0019222 GO:0019318 GO:0019320 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019725 GO:0019752 GO:0019867 GO:0023052 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032592 GO:0032787 GO:0032991 GO:0033500 GO:0034284 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042044 GO:0042221 GO:0042592 GO:0042593 GO:0042866 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044212 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044262 GO:0044270 GO:0044271 GO:0044281 GO:0044282 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0046031 GO:0046034 GO:0046365 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046835 GO:0046872 GO:0046914 GO:0046939 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051156 GO:0051171 GO:0051179 GO:0051186 GO:0051188 GO:0051234 GO:0051252 GO:0051716 GO:0055082 GO:0055086 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0080090 GO:0090332 GO:0090407 GO:0097159 GO:0098573 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00010 ko00051 ko00052 ko00500 ko00520 ko00521 ko00524 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04910 ko04930 ko04973 ko05230 map00010 map00051 map00052 map00500 map00520 map00521 map00524 map01100 map01110 map01120 map01130 map01200 map04066 map04910 map04930 map04973 map05230
Pfam Domains
Protein Families
Hexokinase_1 Hexokinase_2

Protein Analysis

496

Amino Acids

53.71

Weight (kDa)

5.76

Isoelectric Point (pI)

37.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hexokinase_1 PF00349 41 - 240 3.3e-72 Hexokinase
Hexokinase_2 PF03727 247 - 487 3e-81 Hexokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010710)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19860 AT2G19860 AT4G29130
fragaria_vesca FvH4_1g06270
malus_domestica MD02G1066500.v1.1 MD15G1197000.v1.1
prunus_persica Prupe.7G218800_v2.0.a1
pyrus_communis pycom02g05260 pycom15g17600
rosa_chinensis RchiOBHm_Chr2g0091971
rosa_laevigata RLG00000016267
rosa_multiflora Rmu_sc0009216.1_g000003 Rmu_sc0017125.1_g000004
rosa_roxburghii Rroxscaffold_2G00149570
rosa_rugosa Rorug02G0021900
rosa_samantha Rh2AG067600 Rh2BG066900 Rh2CG068200 Rh2DG066700
rosa_wichuraiana Rw2G005340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 842
AasI GACNNNNNNGTC 1 cut(s) 553
AccI GTMKAC 1 cut(s) 502
AccII CGCG 1 cut(s) 794
AciI CCGC 5 cut(s) 41, 44, 53, 345, 792
AclWI GGATC 2 cut(s) 790, 1438
AcsI RAATTY 1 cut(s) 374
AcuI CTGAAG 5 cut(s) 465, 847, 1026, 1274, 1380
AfaI GTAC 1 cut(s) 965
AfiI CCNNNNNNNGG 1 cut(s) 827
AflIII ACRYGT 2 cut(s) 106, 1077
AgsI TTSAA 5 cut(s) 134, 433, 1114, 1409, 1481
AjiI CACGTC 1 cut(s) 107
AjnI CCWGG 1 cut(s) 925
AjuI GAANNNNNNNTTGG 2 cut(s) 591, 623
Alw21I GWGCWC 4 cut(s) 92, 631, 1222, 1367
Alw26I GTCTC 5 cut(s) 160, 290, 572, 1196, 1229
AlwI GGATC 2 cut(s) 790, 1438
AlwNI CAGNNNCTG 1 cut(s) 1194
Ama87I CYCGRG 1 cut(s) 1212
AoxI GGCC 1 cut(s) 126
ApeKI GCWGC 7 cut(s) 674, 740, 770, 1013, 1232, 1445, 1457
ApoI RAATTY 1 cut(s) 374
Asp700I GAANNNNTTC 2 cut(s) 483, 936
AspA2I CCTAGG 1 cut(s) 304
AspLEI GCGC 1 cut(s) 1450
AspS9I GGNCC 2 cut(s) 301, 1150
AsuC2I CCSGG 2 cut(s) 271, 728
AsuII TTCGAA 1 cut(s) 378
AvaI CYCGRG 1 cut(s) 1212
AvaII GGWCC 2 cut(s) 301, 1150
AvrII CCTAGG 1 cut(s) 304
BanII GRGCYC 3 cut(s) 92, 1222, 1367
BarI GAAGNNNNNNTAC 2 cut(s) 1258, 1290
BbsI GAAGAC 1 cut(s) 486
Bbv12I GWGCWC 4 cut(s) 92, 631, 1222, 1367
BbvI GCAGC 7 cut(s) 686, 727, 782, 1000, 1219, 1432, 1444
BccI CCATC 5 cut(s) 602, 994, 1045, 1310, 1421
BceAI ACGGC 1 cut(s) 54
BciT130I CCWGG 1 cut(s) 927
BclI TGATCA 2 cut(s) 895, 1185
BcnI CCSGG 2 cut(s) 271, 728
BcoDI GTCTC 5 cut(s) 160, 290, 572, 1196, 1229
BfaI CTAG 2 cut(s) 305, 704
BfmI CTRYAG 1 cut(s) 468
BisI GCNGC 8 cut(s) 42, 675, 741, 771, 1014, 1233, 1446, 1458
BlnI CCTAGG 1 cut(s) 304
BlsI GCNGC 8 cut(s) 43, 676, 742, 772, 1015, 1234, 1447, 1459
Bme1390I CCNGG 3 cut(s) 271, 728, 927
Bme18I GGWCC 2 cut(s) 301, 1150
BmeT110I CYCGRG 1 cut(s) 1212
BmgBI CACGTC 1 cut(s) 107
BmgT120I GGNCC 2 cut(s) 301, 1150
BmiI GGNNCC 1 cut(s) 1152
BmrFI CCNGG 3 cut(s) 271, 728, 927
BmrI ACTGGG 2 cut(s) 768, 1271
BmsI GCATC 6 cut(s) 72, 169, 186, 221, 228, 1000
BmuI ACTGGG 2 cut(s) 768, 1271
BpiI GAAGAC 1 cut(s) 486
BplI GAGNNNNNCTC 2 cut(s) 1209, 1241
BpmI CTGGAG 1 cut(s) 1089
Bpu10I CCTNAGC 1 cut(s) 91
Bpu14I TTCGAA 1 cut(s) 378
BpuEI CTTGAG 3 cut(s) 107, 218, 962
BpuMI CCSGG 2 cut(s) 271, 728
BsaBI GATNNNNATC 1 cut(s) 242
BsaI GGTCTC 1 cut(s) 290
BsaJI CCNNGG 4 cut(s) 270, 304, 1213, 1311
BsaWI WCCGGW 1 cut(s) 956
BsaXI ACNNNNNCTCC 4 cut(s) 12, 42, 822, 852
Bsc4I CCNNNNNNNGG 1 cut(s) 827
Bse118I RCCGGY 1 cut(s) 707
Bse1I ACTGG 3 cut(s) 415, 763, 1266
Bse8I GATNNNNATC 1 cut(s) 242
BseBI CCWGG 1 cut(s) 927
BseDI CCNNGG 4 cut(s) 270, 304, 1213, 1311
BseGI GGATG 5 cut(s) 87, 212, 280, 736, 1321
BseJI GATNNNNATC 1 cut(s) 242
BseLI CCNNNNNNNGG 1 cut(s) 827
BseMII CTCAG 4 cut(s) 105, 155, 1037, 1355
BseNI ACTGG 3 cut(s) 415, 763, 1266
BseRI GAGGAG 4 cut(s) 387, 1062, 1230, 1301
BseXI GCAGC 7 cut(s) 686, 727, 782, 1000, 1219, 1432, 1444
BsgI GTGCAG 1 cut(s) 1313
Bsh1236I CGCG 1 cut(s) 794
BshFI GGCC 1 cut(s) 128
BsiHKAI GWGCWC 4 cut(s) 92, 631, 1222, 1367
BsiHKCI CYCGRG 1 cut(s) 1212
BsiSI CCGG 4 cut(s) 270, 708, 728, 957
BslFI GGGAC 5 cut(s) 117, 325, 775, 1019, 1136
BslI CCNNNNNNNGG 1 cut(s) 827
BsmAI GTCTC 5 cut(s) 160, 290, 572, 1196, 1229
BsmBI CGTCTC 1 cut(s) 1229
BsmFI GGGAC 5 cut(s) 117, 325, 775, 1019, 1136
BsmI GAATGC 1 cut(s) 479
BsnI GGCC 1 cut(s) 128
Bso31I GGTCTC 1 cut(s) 290
BsoBI CYCGRG 1 cut(s) 1212
Bsp119I TTCGAA 1 cut(s) 378
Bsp1286I GDGCHC 4 cut(s) 92, 631, 1222, 1367
Bsp143I GATC 5 cut(s) 153, 795, 895, 1185, 1430
Bsp19I CCATGG 1 cut(s) 1311
BspACI CCGC 5 cut(s) 41, 44, 53, 345, 792
BspANI GGCC 1 cut(s) 128
BspCNI CTCAG 4 cut(s) 104, 156, 1038, 1354
BspFNI CGCG 1 cut(s) 794
BspLI GGNNCC 1 cut(s) 1152
BspPI GGATC 2 cut(s) 790, 1438
BspT104I TTCGAA 1 cut(s) 378
BspTNI GGTCTC 1 cut(s) 290
BsrFI RCCGGY 1 cut(s) 707
BsrI ACTGG 3 cut(s) 415, 763, 1266
BssAI RCCGGY 1 cut(s) 707
BssECI CCNNGG 4 cut(s) 270, 304, 1213, 1311
BssMI GATC 5 cut(s) 153, 795, 895, 1185, 1430
BssT1I CCWWGG 2 cut(s) 304, 1311
Bst2UI CCWGG 1 cut(s) 927
Bst4CI ACNGT 5 cut(s) 28, 190, 221, 694, 1033
Bst6I CTCTTC 3 cut(s) 129, 979, 1261
BstAPI GCANNNNNTGC 1 cut(s) 814
BstBI TTCGAA 1 cut(s) 378
BstC8I GCNNGC 2 cut(s) 201, 786
BstDEI CTNAG 5 cut(s) 91, 164, 1041, 1046, 1341
BstDSI CCRYGG 1 cut(s) 1311
BstF5I GGATG 5 cut(s) 87, 212, 280, 736, 1321
BstFNI CGCG 1 cut(s) 794
BstHHI GCGC 1 cut(s) 1450
BstKTI GATC 5 cut(s) 156, 798, 898, 1188, 1433
BstMAI GTCTC 5 cut(s) 160, 290, 572, 1196, 1229
BstMBI GATC 5 cut(s) 153, 795, 895, 1185, 1430
BstMWI GCNNNNNNNGC 6 cut(s) 20, 50, 209, 814, 1010, 1454
BstNI CCWGG 1 cut(s) 927
BstNSI RCATGY 3 cut(s) 203, 667, 1081
BstSCI CCNGG 3 cut(s) 269, 726, 925
BstSFI CTRYAG 1 cut(s) 468
BstUI CGCG 1 cut(s) 794
BstV1I GCAGC 7 cut(s) 686, 727, 782, 1000, 1219, 1432, 1444
BstV2I GAAGAC 1 cut(s) 486
BsuRI GGCC 1 cut(s) 128
BtgI CCRYGG 1 cut(s) 1311
BtrI CACGTC 1 cut(s) 107
BtsCI GGATG 5 cut(s) 87, 212, 280, 736, 1321
BtsIMutI CAGTG 1 cut(s) 756
Cac8I GCNNGC 2 cut(s) 201, 786
CaiI CAGNNNCTG 1 cut(s) 1194
CfoI GCGC 1 cut(s) 1450
Cfr10I RCCGGY 1 cut(s) 707
Cfr13I GGNCC 2 cut(s) 301, 1150
Csp6I GTAC 1 cut(s) 964
CviAII CATG 7 cut(s) 200, 328, 664, 809, 847, 1078, 1312
CviQI GTAC 1 cut(s) 964
DdeI CTNAG 5 cut(s) 91, 164, 1041, 1046, 1341
DpnI GATC 5 cut(s) 155, 797, 897, 1187, 1432
DpnII GATC 5 cut(s) 153, 795, 895, 1185, 1430
DrdI GACNNNNNNGTC 1 cut(s) 553
DseDI GACNNNNNNGTC 1 cut(s) 553
Eam1104I CTCTTC 3 cut(s) 129, 979, 1261
EarI CTCTTC 3 cut(s) 129, 979, 1261
Ecl136II GAGCTC 3 cut(s) 90, 1220, 1365
Eco130I CCWWGG 2 cut(s) 304, 1311
Eco147I AGGCCT 1 cut(s) 128
Eco24I GRGCYC 3 cut(s) 92, 1222, 1367
Eco31I GGTCTC 1 cut(s) 290
Eco47I GGWCC 2 cut(s) 301, 1150
Eco53kI GAGCTC 3 cut(s) 90, 1220, 1365
Eco57I CTGAAG 5 cut(s) 465, 847, 1026, 1274, 1380
Eco88I CYCGRG 1 cut(s) 1212
EcoICRI GAGCTC 3 cut(s) 90, 1220, 1365
EcoO109I RGGNCCY 1 cut(s) 1150
EcoRI GAATTC 1 cut(s) 374
EcoRII CCWGG 1 cut(s) 925
EcoT14I CCWWGG 2 cut(s) 304, 1311
EcoT22I ATGCAT 2 cut(s) 201, 298
EcoT38I GRGCYC 3 cut(s) 92, 1222, 1367
ErhI CCWWGG 2 cut(s) 304, 1311
Esp3I CGTCTC 1 cut(s) 1229
FaeI CATG 7 cut(s) 203, 331, 667, 812, 850, 1081, 1315
FalI AAGNNNNNCTT 4 cut(s) 272, 304, 1365, 1397
FaqI GGGAC 5 cut(s) 117, 325, 775, 1019, 1136
FatI CATG 7 cut(s) 199, 327, 663, 808, 846, 1077, 1311
FauI CCCGC 1 cut(s) 338
FbaI TGATCA 2 cut(s) 895, 1185
FblI GTMKAC 1 cut(s) 502
Fnu4HI GCNGC 8 cut(s) 42, 675, 741, 771, 1014, 1233, 1446, 1458
FokI GGATG 5 cut(s) 94, 199, 287, 743, 1328
FriOI GRGCYC 3 cut(s) 92, 1222, 1367
Fsp4HI GCNGC 8 cut(s) 42, 675, 741, 771, 1014, 1233, 1446, 1458
FspBI CTAG 2 cut(s) 305, 704
GlaI GCGC 1 cut(s) 1449
GluI GCNGC 8 cut(s) 42, 675, 741, 771, 1014, 1233, 1446, 1458
GsuI CTGGAG 1 cut(s) 1089
HaeIII GGCC 1 cut(s) 128
HapII CCGG 4 cut(s) 270, 708, 728, 957
HhaI GCGC 1 cut(s) 1450
Hin1II CATG 7 cut(s) 203, 331, 667, 812, 850, 1081, 1315
Hin6I GCGC 1 cut(s) 1448
HinP1I GCGC 1 cut(s) 1448
HindIII AAGCTT 1 cut(s) 1392
HinfI GANTC 9 cut(s) 148, 391, 669, 916, 922, 937, 1069, 1239, 1484
HpaII CCGG 4 cut(s) 270, 708, 728, 957
Hpy166II GTNNAC 1 cut(s) 503
Hpy188I TCNGA 6 cut(s) 153, 217, 421, 921, 1167, 1254
Hpy8I GTNNAC 1 cut(s) 503
Hpy99I CGWCG 3 cut(s) 78, 81, 221
HpyAV CCTTC 2 cut(s) 276, 491
HpyCH4III ACNGT 5 cut(s) 28, 190, 221, 694, 1033
HpyCH4IV ACGT 2 cut(s) 106, 252
HpyCH4V TGCA 9 cut(s) 36, 85, 199, 212, 296, 788, 1090, 1197, 1294
HpyF10VI GCNNNNNNNGC 6 cut(s) 20, 50, 209, 814, 1010, 1454
HpyF3I CTNAG 5 cut(s) 91, 164, 1041, 1046, 1341
HpySE526I ACGT 2 cut(s) 106, 252
Hsp92II CATG 7 cut(s) 203, 331, 667, 812, 850, 1081, 1315
HspAI GCGC 1 cut(s) 1448
Ksp22I TGATCA 2 cut(s) 895, 1185
Kzo9I GATC 5 cut(s) 153, 795, 895, 1185, 1430
LmnI GCTCC 5 cut(s) 20, 626, 1125, 1217, 1442
Lsp1109I GCAGC 7 cut(s) 686, 727, 782, 1000, 1219, 1432, 1444
LweI GCATC 6 cut(s) 72, 169, 186, 221, 228, 1000
MaeI CTAG 2 cut(s) 305, 704
MaeII ACGT 2 cut(s) 106, 252
MaeIII GTNAC 1 cut(s) 1411
MalI GATC 5 cut(s) 155, 797, 897, 1187, 1432
MboI GATC 5 cut(s) 153, 795, 895, 1185, 1430
MhlI GDGCHC 4 cut(s) 92, 631, 1222, 1367
MluCI AATT 3 cut(s) 374, 433, 512
MlyI GAGTC 4 cut(s) 142, 925, 1063, 1478
MmeI TCCRAC 4 cut(s) 240, 589, 604, 676
Mph1103I ATGCAT 2 cut(s) 201, 298
MroXI GAANNNNTTC 2 cut(s) 483, 936
MseI TTAA 7 cut(s) 366, 540, 633, 684, 884, 1134, 1489
MslI CAYNNNNRTG 2 cut(s) 332, 1422
MspI CCGG 4 cut(s) 270, 708, 728, 957
MspR9I CCNGG 3 cut(s) 271, 728, 927
Mva1269I GAATGC 1 cut(s) 479
MvaI CCWGG 1 cut(s) 927
MvnI CGCG 1 cut(s) 794
MwoI GCNNNNNNNGC 6 cut(s) 20, 50, 209, 814, 1010, 1454
NciI CCSGG 2 cut(s) 271, 728
NcoI CCATGG 1 cut(s) 1311
NdeII GATC 5 cut(s) 153, 795, 895, 1185, 1430
NlaIII CATG 7 cut(s) 203, 331, 667, 812, 850, 1081, 1315
NlaIV GGNNCC 1 cut(s) 1152
NmuCI GTSAC 1 cut(s) 1411
NsiI ATGCAT 2 cut(s) 201, 298
NspI RCATGY 3 cut(s) 203, 667, 1081
NspV TTCGAA 1 cut(s) 378
PaeI GCATGC 1 cut(s) 203
PceI AGGCCT 1 cut(s) 128
PciI ACATGT 1 cut(s) 1077
PctI GAATGC 1 cut(s) 479
PdmI GAANNNNTTC 2 cut(s) 483, 936
PfeI GAWTC 5 cut(s) 391, 669, 922, 937, 1239
PkrI GCNGC 8 cut(s) 43, 676, 742, 772, 1015, 1234, 1447, 1459
PleI GAGTC 4 cut(s) 142, 924, 1063, 1478
PpsI GAGTC 4 cut(s) 142, 924, 1063, 1478
PpuMI RGGWCCY 1 cut(s) 1150
PscI ACATGT 1 cut(s) 1077
PsiI TTATAA 1 cut(s) 842
Psp124BI GAGCTC 3 cut(s) 92, 1222, 1367
Psp5II RGGWCCY 1 cut(s) 1150
Psp6I CCWGG 1 cut(s) 925
PspGI CCWGG 1 cut(s) 925
PspN4I GGNNCC 1 cut(s) 1152
PspPI GGNCC 2 cut(s) 301, 1150
PspPPI RGGWCCY 1 cut(s) 1150
PstNI CAGNNNCTG 1 cut(s) 1194
RsaI GTAC 1 cut(s) 965
RsaNI GTAC 1 cut(s) 964
RseI CAYNNNNRTG 2 cut(s) 332, 1422
SacI GAGCTC 3 cut(s) 92, 1222, 1367
SaqAI TTAA 7 cut(s) 366, 540, 633, 684, 884, 1134, 1489
SatI GCNGC 8 cut(s) 42, 675, 741, 771, 1014, 1233, 1446, 1458
Sau3AI GATC 5 cut(s) 153, 795, 895, 1185, 1430
Sau96I GGNCC 2 cut(s) 301, 1150
SchI GAGTC 4 cut(s) 142, 925, 1063, 1478
ScrFI CCNGG 3 cut(s) 271, 728, 927
SduI GDGCHC 4 cut(s) 92, 631, 1222, 1367
SfaNI GCATC 6 cut(s) 72, 169, 186, 221, 228, 1000
SfcI CTRYAG 1 cut(s) 468
SfuI TTCGAA 1 cut(s) 378
SinI GGWCC 2 cut(s) 301, 1150
SmiMI CAYNNNNRTG 2 cut(s) 332, 1422
SmlI CTYRAG 3 cut(s) 122, 233, 941
SmoI CTYRAG 3 cut(s) 122, 233, 941
SphI GCATGC 1 cut(s) 203
Sse9I AATT 3 cut(s) 374, 433, 512
SseBI AGGCCT 1 cut(s) 128
SsiI CCGC 5 cut(s) 41, 44, 53, 345, 792
SspMI CTAG 2 cut(s) 305, 704
SstI GAGCTC 3 cut(s) 92, 1222, 1367
StuI AGGCCT 1 cut(s) 128
StyD4I CCNGG 3 cut(s) 269, 726, 925
StyI CCWWGG 2 cut(s) 304, 1311
TaaI ACNGT 5 cut(s) 28, 190, 221, 694, 1033
TaiI ACGT 2 cut(s) 109, 255
TaqI TCGA 6 cut(s) 73, 158, 378, 389, 597, 912
TasI AATT 3 cut(s) 374, 433, 512
TatI WGTACW 1 cut(s) 963
TauI GCSGC 1 cut(s) 44
TfiI GAWTC 5 cut(s) 391, 669, 922, 937, 1239
Tru1I TTAA 7 cut(s) 366, 540, 633, 684, 884, 1134, 1489
Tru9I TTAA 7 cut(s) 366, 540, 633, 684, 884, 1134, 1489
TscAI CASTG 1 cut(s) 763
TseFI GTSAC 1 cut(s) 1411
TseI GCWGC 7 cut(s) 674, 740, 770, 1013, 1232, 1445, 1457
Tsp45I GTSAC 1 cut(s) 1411
TspDTI ATGAA 4 cut(s) 291, 476, 1048, 1404
TspGWI ACGGA 2 cut(s) 94, 311
TspRI CASTG 1 cut(s) 763
VpaK11BI GGWCC 2 cut(s) 301, 1150
XapI RAATTY 1 cut(s) 374
XceI RCATGY 3 cut(s) 203, 667, 1081
XmaJI CCTAGG 1 cut(s) 304
XmiI GTMKAC 1 cut(s) 502
XmnI GAANNNNTTC 2 cut(s) 483, 936
XspI CTAG 2 cut(s) 305, 704
Zsp2I ATGCAT 2 cut(s) 201, 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.