Rmu_sc0009216.1_g000003

Belongs to the hexokinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009216.1
OG0010710
Physical Location & Seq
Forward (+)
5353 .. 9019
3667 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009216.1_g000003.1.cds

Sequence Viewer

Length: 1527 bp
atggggaaggtggcggtgggcgcggcggtggtgtgcgcggcggtgacgtgcgcggcggcggcgctgctggtgcggcgtcgtttgaagagctcgaggaggtgggcccgggcgatggcgatactgaaggagtttgaggacaagtgtgacacgccgattgggaagctccggcaggtcgccgacgccatgacggtggagatgcacgccgggcttgcgtccgagggcggcagcaagttgaagatgctcatcagctatgttgataacctccccactgggtattcaaaactctatatcacccgccctagggatgagaaaggtctattttatgcattagaccttggtgggacaaacttccgtgtcctgcgtgtacagcttggtgggaaggaaaagcgtgttattaaacaagaatttgacgaagtttcaattccaccacatttgatgactgggacatcagaaggattatttgattttattgctgaagcactagcaaaatttgttgctactgaaggagaaggttttcatcctgcacctggtaggctaagggagctgggttttaccttctcctttcccgtatggcaaacatcaattgcttccgggacccttatgaagtggacaaaaggattcagtattgaagatgcggttgaccaagatgtggtggcggagctcaccaaatcagtggaaaaaattggcctggatatgcgtgttacagctttggttaatgatacaattgggacattagctggaggtaggtaccacaatccggatgcgattgctgctgtcattctgggcactggaacaaatgccgcttatgtagaacgcgcacatgccattccaaaatggcatggtcttctacctaaatcaggagagatggtaatcaacatggagtggggtaactttcgttcatcacaccttcccctaacagaatatgatcaagcccttgatgctgagagtttgacccctggagatcaaatctttgagaagattatttctgggatgtatttaggagagattgtgcgcagagttttgttgaagatggctgaagaagctgccttttttggtgatactgttccacccaaactgaaagttcctttcatattaaggactcctgacatgtccgcaatgcatcatgactcatctctggatctgaaagtagttgggaccaaactcaaggatatcctagagatctccaatacatcactgaaagtgagaaaggctgttgtggcgttatgcgacatagtttccactcgtggggcccgcctctccgctgctgggatcctgggagtccttaagaagttgggtagagacacagtaaaggatggagagaagcacaagtcagtggtagcaatggatggtggcttgtttgagcattacactgaattccgcgtctgcatggagagtactctttatgagttgttgggtgatgaagttgctgagcacatctcggttgagcactcaaatgatgggtccggaattggagctgctctcctggcagcctctcactcccattaccttggggcagaggagtcgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001047 GO:0001067 GO:0001678 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004340 GO:0004396 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005773 GO:0005774 GO:0005829 GO:0005975 GO:0005996 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006355 GO:0006357 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006833 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0008270 GO:0008865 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009536 GO:0009743 GO:0009746 GO:0009747 GO:0009749 GO:0009756 GO:0009757 GO:0009889 GO:0009987 GO:0010033 GO:0010118 GO:0010148 GO:0010182 GO:0010255 GO:0010468 GO:0010556 GO:0012501 GO:0016020 GO:0016021 GO:0016052 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019158 GO:0019200 GO:0019219 GO:0019222 GO:0019318 GO:0019320 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019725 GO:0019752 GO:0019867 GO:0023052 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032592 GO:0032787 GO:0032991 GO:0033500 GO:0034284 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042044 GO:0042221 GO:0042592 GO:0042593 GO:0042866 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044212 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044262 GO:0044270 GO:0044271 GO:0044281 GO:0044282 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0046031 GO:0046034 GO:0046365 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046835 GO:0046872 GO:0046914 GO:0046939 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051156 GO:0051171 GO:0051179 GO:0051186 GO:0051188 GO:0051234 GO:0051252 GO:0051716 GO:0055082 GO:0055086 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0080090 GO:0090332 GO:0090407 GO:0097159 GO:0098573 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00010 ko00051 ko00052 ko00500 ko00520 ko00521 ko00524 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04910 ko04930 ko04973 ko05230 map00010 map00051 map00052 map00500 map00520 map00521 map00524 map01100 map01110 map01120 map01130 map01200 map04066 map04910 map04930 map04973 map05230
Pfam Domains
Protein Families
Hexokinase_1 Hexokinase_2

Protein Analysis

508

Amino Acids

55.19

Weight (kDa)

6.34

Isoelectric Point (pI)

33.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010710)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19860 AT2G19860 AT4G29130
fragaria_vesca FvH4_1g06270
malus_domestica MD02G1066500.v1.1 MD15G1197000.v1.1
prunus_persica Prupe.7G218800_v2.0.a1
pyrus_communis pycom02g05260 pycom15g17600
rosa_chinensis RchiOBHm_Chr2g0091971
rosa_laevigata RLG00000016267
rosa_multiflora Rmu_sc0009216.1_g000003 Rmu_sc0017125.1_g000004
rosa_roxburghii Rroxscaffold_2G00149570
rosa_rugosa Rorug02G0021900
rosa_samantha Rh2AG067600 Rh2BG066900 Rh2CG068200 Rh2DG066700
rosa_wichuraiana Rw2G005340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1013
Acc36I ACCTGC 1 cut(s) 160
Acc65I GGTACC 1 cut(s) 747
AccB1I GGYRCC 1 cut(s) 747
AccB7I CCANNNNNTGG 1 cut(s) 649
AccII CGCG 5 cut(s) 23, 38, 53, 816, 1380
AccIII TCCGGA 2 cut(s) 757, 1463
AclWI GGATC 3 cut(s) 1146, 1264, 1277
AcsI RAATTY 3 cut(s) 404, 488, 1373
AcuI CTGAAG 4 cut(s) 143, 495, 522, 1056
AcyI GRCGYC 2 cut(s) 76, 180
AfaI GTAC 3 cut(s) 366, 749, 1396
AfiI CCNNNNNNNGG 9 cut(s) 112, 300, 301, 527, 649, 757, 857, 1245, 1266
AflII CTTAAG 1 cut(s) 1283
AflIII ACRYGT 1 cut(s) 1107
AgsI TTSAA 6 cut(s) 85, 235, 279, 420, 629, 1027
AjiI CACGTC 1 cut(s) 48
AjnI CCWGG 5 cut(s) 526, 687, 955, 1272, 1482
Alw21I GWGCWC 4 cut(s) 92, 663, 1434, 1449
Alw26I GTCTC 1 cut(s) 1293
AlwI GGATC 3 cut(s) 1146, 1264, 1277
Ama87I CYCGRG 2 cut(s) 91, 105
Aor13HI TCCGGA 2 cut(s) 757, 1463
AoxI GGCC 3 cut(s) 102, 685, 1248
ApaI GGGCCC 2 cut(s) 106, 1252
ApeKI GCWGC 7 cut(s) 64, 225, 770, 1043, 1262, 1475, 1487
ApoI RAATTY 3 cut(s) 404, 488, 1373
ArsI GACNNNNNNTTYG 2 cut(s) 1445, 1477
Asp700I GAANNNNTTC 1 cut(s) 513
Asp718I GGTACC 1 cut(s) 747
AspA2I CCTAGG 1 cut(s) 299
AspLEI GCGC 6 cut(s) 23, 38, 53, 64, 818, 1014
AspS9I GGNCC 7 cut(s) 102, 103, 594, 1155, 1248, 1249, 1461
AsuC2I CCSGG 4 cut(s) 106, 107, 205, 592
AsuHPI GGTGA 5 cut(s) 55, 283, 655, 1067, 1427
AvaI CYCGRG 2 cut(s) 91, 105
AvaII GGWCC 3 cut(s) 594, 1155, 1461
AvrII CCTAGG 1 cut(s) 299
BaeGI GKGCMC 3 cut(s) 106, 788, 1252
BamHI GGATCC 1 cut(s) 1269
BanI GGYRCC 1 cut(s) 747
BanII GRGCYC 4 cut(s) 92, 106, 663, 1252
BauI CACGAG 1 cut(s) 1242
BbsI GAAGAC 1 cut(s) 836
Bbv12I GWGCWC 4 cut(s) 92, 663, 1434, 1449
BbvI GCAGC 7 cut(s) 51, 237, 757, 1030, 1249, 1462, 1499
BccI CCATC 6 cut(s) 106, 859, 1024, 1307, 1340, 1451
BcgI CGANNNNNNTGC 1 cut(s) 1503
BciT130I CCWGG 5 cut(s) 528, 689, 957, 1274, 1484
BclI TGATCA 1 cut(s) 925
BcnI CCSGG 4 cut(s) 106, 107, 205, 592
BcoDI GTCTC 1 cut(s) 1293
BfaI CTAG 3 cut(s) 300, 482, 1175
BfoI RGCGCY 1 cut(s) 65
BfrI CTTAAG 1 cut(s) 1283
BfuAI ACCTGC 1 cut(s) 160
BglII AGATCT 1 cut(s) 1179
BlnI CCTAGG 1 cut(s) 299
BlpI GCTNAGC 1 cut(s) 1428
BmcAI AGTACT 1 cut(s) 1396
Bme1390I CCNGG 9 cut(s) 106, 107, 205, 528, 592, 689, 957, 1274, 1484
Bme18I GGWCC 3 cut(s) 594, 1155, 1461
BmeT110I CYCGRG 2 cut(s) 91, 105
BmgBI CACGTC 1 cut(s) 48
BmgT120I GGNCC 7 cut(s) 102, 103, 594, 1155, 1248, 1249, 1461
BmiI GGNNCC 9 cut(s) 104, 595, 596, 749, 1156, 1249, 1250, 1271, 1462
BmrFI CCNGG 9 cut(s) 106, 107, 205, 528, 592, 689, 957, 1274, 1484
BmrI ACTGGG 2 cut(s) 279, 450
BmsI GCATC 6 cut(s) 186, 228, 622, 751, 928, 1129
BmuI ACTGGG 2 cut(s) 279, 450
BpiI GAAGAC 1 cut(s) 836
BplI GAGNNNNNCTC 4 cut(s) 1421, 1453, 1464, 1496
BpmI CTGGAG 2 cut(s) 759, 978
Bpu10I CCTNAGC 1 cut(s) 536
Bpu1102I GCTNAGC 1 cut(s) 1428
BpuEI CTTGAG 1 cut(s) 1148
BpuMI CCSGG 4 cut(s) 106, 107, 205, 592
BsaBI GATNNNNATC 2 cut(s) 242, 869
BsaHI GRCGYC 2 cut(s) 76, 180
BsaJI CCNNGG 7 cut(s) 105, 216, 299, 334, 955, 1273, 1507
BsaWI WCCGGW 2 cut(s) 757, 1463
BsaXI ACNNNNNCTCC 4 cut(s) 852, 882, 993, 1023
Bsc4I CCNNNNNNNGG 9 cut(s) 112, 300, 301, 527, 649, 757, 857, 1245, 1266
Bse1I ACTGG 3 cut(s) 274, 445, 793
Bse3DI GCAATG 2 cut(s) 1122, 1347
Bse8I GATNNNNATC 2 cut(s) 242, 869
BseAI TCCGGA 2 cut(s) 757, 1463
BseBI CCWGG 5 cut(s) 528, 689, 957, 1274, 1484
BseDI CCNNGG 7 cut(s) 105, 216, 299, 334, 955, 1273, 1507
BseGI GGATG 6 cut(s) 310, 517, 766, 996, 1318, 1351
BseJI GATNNNNATC 2 cut(s) 242, 869
BseLI CCNNNNNNNGG 9 cut(s) 112, 300, 301, 527, 649, 757, 857, 1245, 1266
BseMI GCAATG 2 cut(s) 1122, 1347
BseMII CTCAG 2 cut(s) 933, 1419
BseNI ACTGG 3 cut(s) 274, 445, 793
BseRI GAGGAG 1 cut(s) 109
BseSI GKGCMC 3 cut(s) 106, 788, 1252
BseXI GCAGC 7 cut(s) 51, 237, 757, 1030, 1249, 1462, 1499
BseYI CCCAGC 2 cut(s) 544, 1265
BsgI GTGCAG 1 cut(s) 507
Bsh1236I CGCG 5 cut(s) 23, 38, 53, 816, 1380
BshFI GGCC 3 cut(s) 104, 687, 1250
BshNI GGYRCC 1 cut(s) 747
BsiHKAI GWGCWC 4 cut(s) 92, 663, 1434, 1449
BsiHKCI CYCGRG 2 cut(s) 91, 105
BsiSI CCGG 6 cut(s) 106, 166, 204, 591, 758, 1464
BslFI GGGAC 5 cut(s) 355, 457, 607, 742, 1168
BslI CCNNNNNNNGG 9 cut(s) 112, 300, 301, 527, 649, 757, 857, 1245, 1266
BsmAI GTCTC 1 cut(s) 1293
BsmFI GGGAC 5 cut(s) 355, 457, 607, 742, 1168
BsnI GGCC 3 cut(s) 104, 687, 1250
BsoBI CYCGRG 2 cut(s) 91, 105
Bsp120I GGGCCC 2 cut(s) 102, 1248
Bsp1286I GDGCHC 7 cut(s) 92, 106, 663, 788, 1252, 1434, 1449
Bsp13I TCCGGA 2 cut(s) 757, 1463
Bsp1407I TGTACA 1 cut(s) 364
Bsp143I GATC 5 cut(s) 925, 961, 1138, 1179, 1269
Bsp1720I GCTNAGC 1 cut(s) 1428
BspANI GGCC 3 cut(s) 104, 687, 1250
BspCNI CTCAG 2 cut(s) 934, 1420
BspEI TCCGGA 2 cut(s) 757, 1463
BspFNI CGCG 5 cut(s) 23, 38, 53, 816, 1380
BspHI TCATGA 1 cut(s) 1123
BspLI GGNNCC 9 cut(s) 104, 595, 596, 749, 1156, 1249, 1250, 1271, 1462
BspMI ACCTGC 1 cut(s) 160
BspPI GGATC 3 cut(s) 1146, 1264, 1277
BspQI GCTCTTC 1 cut(s) 80
BspT107I GGYRCC 1 cut(s) 747
BspTI CTTAAG 1 cut(s) 1283
BsrDI GCAATG 2 cut(s) 1122, 1347
BsrGI TGTACA 1 cut(s) 364
BsrI ACTGG 3 cut(s) 274, 445, 793
BssECI CCNNGG 7 cut(s) 105, 216, 299, 334, 955, 1273, 1507
BssMI GATC 5 cut(s) 925, 961, 1138, 1179, 1269
BssNI GRCGYC 2 cut(s) 76, 180
BssSI CACGAG 1 cut(s) 1242
BssT1I CCWWGG 3 cut(s) 299, 334, 1507
Bst2BI CACGAG 1 cut(s) 1242
Bst2UI CCWGG 5 cut(s) 528, 689, 957, 1274, 1484
Bst4CI ACNGT 3 cut(s) 190, 1063, 1306
Bst6I CTCTTC 1 cut(s) 80
BstACI GRCGYC 2 cut(s) 76, 180
BstAFI CTTAAG 1 cut(s) 1283
BstAUI TGTACA 1 cut(s) 364
BstC8I GCNNGC 3 cut(s) 201, 210, 1252
BstDEI CTNAG 3 cut(s) 536, 942, 1428
BstENI CCTNNNNNAGG 1 cut(s) 855
BstF5I GGATG 6 cut(s) 310, 517, 766, 996, 1318, 1351
BstFNI CGCG 5 cut(s) 23, 38, 53, 816, 1380
BstH2I RGCGCY 1 cut(s) 65
BstHHI GCGC 6 cut(s) 23, 38, 53, 64, 818, 1014
BstKTI GATC 5 cut(s) 928, 964, 1141, 1182, 1272
BstMAI GTCTC 1 cut(s) 1293
BstMBI GATC 5 cut(s) 925, 961, 1138, 1179, 1269
BstNI CCWGG 5 cut(s) 528, 689, 957, 1274, 1484
BstNSI RCATGY 2 cut(s) 824, 1111
BstSCI CCNGG 9 cut(s) 104, 105, 203, 526, 590, 687, 955, 1272, 1482
BstSLI GKGCMC 3 cut(s) 106, 788, 1252
BstUI CGCG 5 cut(s) 23, 38, 53, 816, 1380
BstV1I GCAGC 7 cut(s) 51, 237, 757, 1030, 1249, 1462, 1499
BstV2I GAAGAC 1 cut(s) 836
BstX2I RGATCY 3 cut(s) 1138, 1179, 1269
BstXI CCANNNNNNTGG 3 cut(s) 190, 673, 1508
BstYI RGATCY 3 cut(s) 1138, 1179, 1269
BsuRI GGCC 3 cut(s) 104, 687, 1250
BtgZI GCGATG 1 cut(s) 125
BtrI CACGTC 1 cut(s) 48
BtsCI GGATG 6 cut(s) 310, 517, 766, 996, 1318, 1351
BtsIMutI CAGTG 6 cut(s) 267, 678, 786, 1193, 1338, 1368
BveI ACCTGC 1 cut(s) 160
Cac8I GCNNGC 3 cut(s) 201, 210, 1252
CciI TCATGA 1 cut(s) 1123
CfoI GCGC 6 cut(s) 23, 38, 53, 64, 818, 1014
Cfr13I GGNCC 7 cut(s) 102, 103, 594, 1155, 1248, 1249, 1461
Cfr9I CCCGGG 1 cut(s) 105
CseI GACGC 4 cut(s) 65, 188, 201, 1369
CsiI ACCWGGT 1 cut(s) 526
Csp6I GTAC 3 cut(s) 365, 748, 1395
CspCI CAANNNNNGTGG 2 cut(s) 414, 449
CviAII CATG 7 cut(s) 184, 821, 839, 877, 1108, 1124, 1387
CviQI GTAC 3 cut(s) 365, 748, 1395
DdeI CTNAG 3 cut(s) 536, 942, 1428
DpnI GATC 5 cut(s) 927, 963, 1140, 1181, 1271
DpnII GATC 5 cut(s) 925, 961, 1138, 1179, 1269
Eam1104I CTCTTC 1 cut(s) 80
EarI CTCTTC 1 cut(s) 80
EciI GGCGGA 1 cut(s) 671
Ecl136II GAGCTC 2 cut(s) 90, 661
Eco130I CCWWGG 3 cut(s) 299, 334, 1507
Eco24I GRGCYC 4 cut(s) 92, 106, 663, 1252
Eco32I GATATC 1 cut(s) 1171
Eco47I GGWCC 3 cut(s) 594, 1155, 1461
Eco53kI GAGCTC 2 cut(s) 90, 661
Eco57I CTGAAG 4 cut(s) 143, 495, 522, 1056
Eco88I CYCGRG 2 cut(s) 91, 105
EcoICRI GAGCTC 2 cut(s) 90, 661
EcoNI CCTNNNNNAGG 1 cut(s) 855
EcoO109I RGGNCCY 2 cut(s) 594, 1248
EcoRI GAATTC 1 cut(s) 1373
EcoRII CCWGG 5 cut(s) 526, 687, 955, 1272, 1482
EcoRV GATATC 1 cut(s) 1171
EcoT14I CCWWGG 3 cut(s) 299, 334, 1507
EcoT22I ATGCAT 2 cut(s) 328, 1122
EcoT38I GRGCYC 4 cut(s) 92, 106, 663, 1252
ErhI CCWWGG 3 cut(s) 299, 334, 1507
FaeI CATG 7 cut(s) 187, 824, 842, 880, 1111, 1127, 1390
FaqI GGGAC 5 cut(s) 355, 457, 607, 742, 1168
FatI CATG 7 cut(s) 183, 820, 838, 876, 1107, 1123, 1386
FauI CCCGC 2 cut(s) 302, 1259
FbaI TGATCA 1 cut(s) 925
FokI GGATG 6 cut(s) 317, 504, 773, 1003, 1325, 1358
FriOI GRGCYC 4 cut(s) 92, 106, 663, 1252
FspBI CTAG 3 cut(s) 300, 482, 1175
FspI TGCGCA 1 cut(s) 1013
GlaI GCGC 6 cut(s) 22, 37, 52, 63, 817, 1013
GsaI CCCAGC 2 cut(s) 548, 1269
GsuI CTGGAG 2 cut(s) 759, 978
HaeII RGCGCY 1 cut(s) 65
HaeIII GGCC 3 cut(s) 104, 687, 1250
HapII CCGG 6 cut(s) 106, 166, 204, 591, 758, 1464
HgaI GACGC 4 cut(s) 65, 188, 201, 1369
HhaI GCGC 6 cut(s) 23, 38, 53, 64, 818, 1014
Hin1I GRCGYC 2 cut(s) 76, 180
Hin1II CATG 7 cut(s) 187, 824, 842, 880, 1111, 1127, 1390
Hin6I GCGC 6 cut(s) 21, 36, 51, 62, 816, 1012
HinP1I GCGC 6 cut(s) 21, 36, 51, 62, 816, 1012
HincII GTYRAC 1 cut(s) 640
HindII GTYRAC 1 cut(s) 640
HinfI GANTC 5 cut(s) 618, 1099, 1127, 1278, 1520
HpaII CCGG 6 cut(s) 106, 166, 204, 591, 758, 1464
HphI GGTGA 5 cut(s) 55, 283, 655, 1067, 1427
Hpy166II GTNNAC 3 cut(s) 365, 609, 640
Hpy188I TCNGA 3 cut(s) 217, 451, 1143
Hpy188III TCNNGA 6 cut(s) 758, 858, 1103, 1124, 1136, 1464
Hpy8I GTNNAC 3 cut(s) 365, 609, 640
Hpy99I CGWCG 2 cut(s) 81, 182
HpyAV CCTTC 7 cut(s) 118, 373, 446, 497, 503, 565, 917
HpyCH4III ACNGT 3 cut(s) 190, 1063, 1306
HpyCH4IV ACGT 1 cut(s) 47
HpyCH4V TGCA 5 cut(s) 199, 326, 524, 1120, 1386
HpyF3I CTNAG 3 cut(s) 536, 942, 1428
HpySE526I ACGT 1 cut(s) 47
Hsp92I GRCGYC 2 cut(s) 76, 180
Hsp92II CATG 7 cut(s) 187, 824, 842, 880, 1111, 1127, 1390
HspAI GCGC 6 cut(s) 21, 36, 51, 62, 816, 1012
KflI GGGWCCC 1 cut(s) 594
Kpn2I TCCGGA 2 cut(s) 757, 1463
KpnI GGTACC 1 cut(s) 751
Ksp22I TGATCA 1 cut(s) 925
Kzo9I GATC 5 cut(s) 925, 961, 1138, 1179, 1269
LguI GCTCTTC 1 cut(s) 80
LmnI GCTCC 4 cut(s) 168, 541, 658, 1472
Lsp1109I GCAGC 7 cut(s) 51, 237, 757, 1030, 1249, 1462, 1499
LweI GCATC 6 cut(s) 186, 228, 622, 751, 928, 1129
MabI ACCWGGT 1 cut(s) 526
MaeI CTAG 3 cut(s) 300, 482, 1175
MaeII ACGT 1 cut(s) 47
MaeIII GTNAC 4 cut(s) 43, 143, 700, 887
MalI GATC 5 cut(s) 927, 963, 1140, 1181, 1271
MboI GATC 5 cut(s) 925, 961, 1138, 1179, 1269
MboII GAAGA 7 cut(s) 97, 247, 641, 836, 988, 1039, 1049
MfeI CAATTG 2 cut(s) 582, 723
MflI RGATCY 3 cut(s) 1138, 1179, 1269
MhlI GDGCHC 7 cut(s) 92, 106, 663, 788, 1252, 1434, 1449
MluCI AATT 8 cut(s) 404, 420, 488, 582, 681, 723, 1373, 1467
MlyI GAGTC 3 cut(s) 1093, 1121, 1287
MnlI CCTC 9 cut(s) 87, 90, 127, 211, 272, 734, 1265, 1501, 1510
Mph1103I ATGCAT 2 cut(s) 328, 1122
MroI TCCGGA 2 cut(s) 757, 1463
MroXI GAANNNNTTC 1 cut(s) 513
MseI TTAA 4 cut(s) 396, 714, 1094, 1284
MslI CAYNNNNRTG 2 cut(s) 188, 1452
MspA1I CMGCKG 1 cut(s) 1262
MspCI CTTAAG 1 cut(s) 1283
MspI CCGG 6 cut(s) 106, 166, 204, 591, 758, 1464
MspR9I CCNGG 9 cut(s) 106, 107, 205, 528, 592, 689, 957, 1274, 1484
MunI CAATTG 2 cut(s) 582, 723
MvaI CCWGG 5 cut(s) 528, 689, 957, 1274, 1484
MvnI CGCG 5 cut(s) 23, 38, 53, 816, 1380
NciI CCSGG 4 cut(s) 106, 107, 205, 592
NdeII GATC 5 cut(s) 925, 961, 1138, 1179, 1269
NlaIII CATG 7 cut(s) 187, 824, 842, 880, 1111, 1127, 1390
NlaIV GGNNCC 9 cut(s) 104, 595, 596, 749, 1156, 1249, 1250, 1271, 1462
NmuCI GTSAC 2 cut(s) 43, 143
NsbI TGCGCA 1 cut(s) 1013
NsiI ATGCAT 2 cut(s) 328, 1122
NspI RCATGY 2 cut(s) 824, 1111
PaeR7I CTCGAG 1 cut(s) 91
PagI TCATGA 1 cut(s) 1123
PciI ACATGT 1 cut(s) 1107
PciSI GCTCTTC 1 cut(s) 80
PdmI GAANNNNTTC 1 cut(s) 513
PfeI GAWTC 1 cut(s) 618
PflMI CCANNNNNTGG 1 cut(s) 649
PfoI TCCNGGA 1 cut(s) 590
PleI GAGTC 3 cut(s) 1093, 1121, 1286
PpsI GAGTC 3 cut(s) 1093, 1121, 1286
PpuMI RGGWCCY 1 cut(s) 594
PscI ACATGT 1 cut(s) 1107
Psp124BI GAGCTC 2 cut(s) 92, 663
Psp5II RGGWCCY 1 cut(s) 594
Psp6I CCWGG 5 cut(s) 526, 687, 955, 1272, 1482
PspFI CCCAGC 2 cut(s) 544, 1265
PspGI CCWGG 5 cut(s) 526, 687, 955, 1272, 1482
PspN4I GGNNCC 9 cut(s) 104, 595, 596, 749, 1156, 1249, 1250, 1271, 1462
PspOMI GGGCCC 2 cut(s) 102, 1248
PspPI GGNCC 7 cut(s) 102, 103, 594, 1155, 1248, 1249, 1461
PspPPI RGGWCCY 1 cut(s) 594
PspXI VCTCGAGB 1 cut(s) 91
PsrI GAACNNNNNNTAC 2 cut(s) 880, 912
PsuI RGATCY 3 cut(s) 1138, 1179, 1269
RsaI GTAC 3 cut(s) 366, 749, 1396
RsaNI GTAC 3 cut(s) 365, 748, 1395
RseI CAYNNNNRTG 2 cut(s) 188, 1452
SacI GAGCTC 2 cut(s) 92, 663
SapI GCTCTTC 1 cut(s) 80
SaqAI TTAA 4 cut(s) 396, 714, 1094, 1284
Sau3AI GATC 5 cut(s) 925, 961, 1138, 1179, 1269
Sau96I GGNCC 7 cut(s) 102, 103, 594, 1155, 1248, 1249, 1461
ScaI AGTACT 1 cut(s) 1396
SchI GAGTC 3 cut(s) 1093, 1121, 1287
ScrFI CCNGG 9 cut(s) 106, 107, 205, 528, 592, 689, 957, 1274, 1484
SduI GDGCHC 7 cut(s) 92, 106, 663, 788, 1252, 1434, 1449
SexAI ACCWGGT 1 cut(s) 526
SfaNI GCATC 6 cut(s) 186, 228, 622, 751, 928, 1129
Sfr274I CTCGAG 1 cut(s) 91
SinI GGWCC 3 cut(s) 594, 1155, 1461
SlaI CTCGAG 1 cut(s) 91
SmaI CCCGGG 1 cut(s) 107
SmiMI CAYNNNNRTG 2 cut(s) 188, 1452
SmlI CTYRAG 3 cut(s) 91, 1163, 1283
SmoI CTYRAG 3 cut(s) 91, 1163, 1283
SrfI GCCCGGGC 1 cut(s) 107
Sse9I AATT 8 cut(s) 404, 420, 488, 582, 681, 723, 1373, 1467
SspMI CTAG 3 cut(s) 300, 482, 1175
SstI GAGCTC 2 cut(s) 92, 663
StyD4I CCNGG 9 cut(s) 104, 105, 203, 526, 590, 687, 955, 1272, 1482
StyI CCWWGG 3 cut(s) 299, 334, 1507
TaaI ACNGT 3 cut(s) 190, 1063, 1306
TaiI ACGT 1 cut(s) 50
TaqI TCGA 1 cut(s) 92
TasI AATT 8 cut(s) 404, 420, 488, 582, 681, 723, 1373, 1467
TatI WGTACW 2 cut(s) 364, 1394
TauI GCSGC 8 cut(s) 26, 41, 56, 59, 62, 76, 225, 803
TfiI GAWTC 1 cut(s) 618
Tru1I TTAA 4 cut(s) 396, 714, 1094, 1284
Tru9I TTAA 4 cut(s) 396, 714, 1094, 1284
TscAI CASTG 6 cut(s) 274, 678, 793, 1200, 1338, 1375
TseFI GTSAC 2 cut(s) 43, 143
TseI GCWGC 7 cut(s) 64, 225, 770, 1043, 1262, 1475, 1487
Tsp45I GTSAC 2 cut(s) 43, 143
TspDTI ATGAA 5 cut(s) 506, 617, 888, 1078, 1434
TspGWI ACGGA 1 cut(s) 341
TspMI CCCGGG 1 cut(s) 105
TspRI CASTG 6 cut(s) 274, 678, 793, 1200, 1338, 1375
Van91I CCANNNNNTGG 1 cut(s) 649
Vha464I CTTAAG 1 cut(s) 1283
VpaK11BI GGWCC 3 cut(s) 594, 1155, 1461
XagI CCTNNNNNAGG 1 cut(s) 855
XapI RAATTY 3 cut(s) 404, 488, 1373
XceI RCATGY 2 cut(s) 824, 1111
XhoI CTCGAG 1 cut(s) 91
XmaI CCCGGG 1 cut(s) 105
XmaJI CCTAGG 1 cut(s) 299
XmnI GAANNNNTTC 1 cut(s) 513
XspI CTAG 3 cut(s) 300, 482, 1175
ZrmI AGTACT 1 cut(s) 1396
Zsp2I ATGCAT 2 cut(s) 328, 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.