Rorug02G0021900

Belongs to the hexokinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0010710
Physical Location & Seq
Forward (+)
1770846 .. 1772219
1374 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0021900.1

Sequence Viewer

Length: 1374 bp
ATGACTGAAGGAAGTACTGACGCCCACCCGATGAAACGAAAAGATAAAAGAACAAGAATGCCTGACGACGACGTGAACAAGGAAAGTAAGAGACAAAGAACCAAAGAGAAAAAGTTTGATCAGGTTCACACAGCCATCAAGCGTCTCATGTTCGCCGTCGACGGTGGCAGTAGGCCTGAAGATCTTGTAAGGTTGACCGGTAGCAATCCTGAGGTGGTGGAGATCAATGAGCCCAAGTGCGTTGAGTATTTGAACAAGATACATGACCAAATTGTTGAGCTAAAACAAAATAGTATCAAAAAGAGAAAAGCAAACTGGTCTGGGCTTCCCACTGAGCTTCTAGAGTCCATCTTGAAAAAGCTTATACCTTCTGAATTTGACATCCTTGGCTTTAGAGATATTCGATATTTTAAAGCCGTCTGTCATTCCTGGAGAACCGCCGCAATATCTTGTAGCTCTTACGTCCCGTTGCCTCGAACTCCGTGTCTCTTGCTTCATGAAAACAACTCCTCCCTTTTTGATCCCATAGGAAAGAAGGTGCACCAAATCAGGAACATCTGTGACTTTTTTCCTCGAGCCACCTGTGTGGGTTCATCATATGGGTGGATTGTCATGTTTTACGAAGATGAAGATTCGAAAGAATCAATGGCACATCTTTTTAACCCGATTTCAAGAGCCAGCATTCCAATCCCAGGCACACAGACCCTTCAAGACTACAGCCTTGCAAACAAAATTTCTAAAGCTATTGTTTCGTCCAATCCGTCTAGCAACAAAAACTTTTTTGTGGTAGTGGAATATAAGGGAAATCTAGCATACTATAAGCTTGGCGACGGAGACAAATCATGGCGAAAGTTGGGCGATAATAACAGACACAAATATATTATGTTTCACAATGACCAATTAATTGCATTGTCCCGGGGGTTAACTGAGATTTGGAACTTCAAGGAATACCCTCCTCGACGACCTCGGCGTATTGAAGACTCTCCTACCGACGGACGGGTTGAAGATTCCTATTTGGTGGAGTCATTGACGGGTGATATTTTACGTGTGGGAAAAAGTGTGAAAGAAAGAGGTATGGATGGGACTTCACAGTTTTCTGTGAAAAAGTTAAACTTAGCGGAAAGCAAATGGGAAAATGTGCAAAGTTTAGGCGACCAGAGCTTGTACTTGTTTCGTGAACATGTAATGTCATTGCCGAACCCATGTTTCTTAGGATGTGAGAAAAACTCAATCTACTTCGCAACAACAAAAGTTGAAGAATATAGAATATACAACCTTGATGAAGGTAAAGTAATTAGGAAGGAGTCATTTAGTGAAAATGTACAATTGAATGCTTGTTGTAAACCATTTTGGATTGTTCCTAATCCATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001047 GO:0001067 GO:0001678 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004340 GO:0004396 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005773 GO:0005774 GO:0005829 GO:0005975 GO:0005996 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006355 GO:0006357 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006833 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0008270 GO:0008865 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009536 GO:0009743 GO:0009746 GO:0009747 GO:0009749 GO:0009756 GO:0009757 GO:0009889 GO:0009987 GO:0010033 GO:0010118 GO:0010148 GO:0010182 GO:0010255 GO:0010468 GO:0010556 GO:0012501 GO:0016020 GO:0016021 GO:0016052 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019158 GO:0019200 GO:0019219 GO:0019222 GO:0019318 GO:0019320 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019725 GO:0019752 GO:0019867 GO:0023052 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032592 GO:0032787 GO:0032991 GO:0033500 GO:0034284 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042044 GO:0042221 GO:0042592 GO:0042593 GO:0042866 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044212 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044262 GO:0044270 GO:0044271 GO:0044281 GO:0044282 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0046031 GO:0046034 GO:0046365 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046835 GO:0046872 GO:0046914 GO:0046939 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051156 GO:0051171 GO:0051179 GO:0051186 GO:0051188 GO:0051234 GO:0051252 GO:0051716 GO:0055082 GO:0055086 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0080090 GO:0090332 GO:0090407 GO:0097159 GO:0098573 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00010 ko00051 ko00052 ko00500 ko00520 ko00521 ko00524 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04910 ko04930 ko04973 ko05230 map00010 map00051 map00052 map00500 map00520 map00521 map00524 map01100 map01110 map01120 map01130 map01200 map04066 map04910 map04930 map04973 map05230
Pfam Domains
Protein Families
Hexokinase_1 Hexokinase_2

Protein Analysis

457

Amino Acids

52.63

Weight (kDa)

8.93

Isoelectric Point (pI)

43.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 174 - 425 2.7e-38 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010710)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19860 AT2G19860 AT4G29130
fragaria_vesca FvH4_1g06270
malus_domestica MD02G1066500.v1.1 MD15G1197000.v1.1
prunus_persica Prupe.7G218800_v2.0.a1
pyrus_communis pycom02g05260 pycom15g17600
rosa_chinensis RchiOBHm_Chr2g0091971
rosa_laevigata RLG00000016267
rosa_multiflora Rmu_sc0009216.1_g000003 Rmu_sc0017125.1_g000004
rosa_roxburghii Rroxscaffold_2G00149570
rosa_rugosa Rorug02G0021900
rosa_samantha Rh2AG067600 Rh2BG066900 Rh2CG068200 Rh2DG066700
rosa_wichuraiana Rw2G005340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 159
AciI CCGC 3 cut(s) 438, 441, 1118
AclWI GGATC 1 cut(s) 515
AcsI RAATTY 2 cut(s) 374, 732
AcuI CTGAAG 2 cut(s) 27, 198
AcyI GRCGYC 1 cut(s) 21
AfaI GTAC 3 cut(s) 16, 1166, 1323
AfiI CCNNNNNNNGG 3 cut(s) 692, 992, 996
AflIII ACRYGT 2 cut(s) 1045, 1180
AgeI ACCGGT 1 cut(s) 197
AgsI TTSAA 9 cut(s) 253, 355, 672, 710, 943, 977, 1004, 1256, 1330
AjiI CACGTC 1 cut(s) 73
AjnI CCWGG 2 cut(s) 428, 691
AleI CACNNNNGTG 1 cut(s) 584
AluBI AGCT 7 cut(s) 280, 337, 361, 456, 743, 823, 1161
AluI AGCT 7 cut(s) 280, 337, 361, 456, 743, 823, 1161
Alw21I GWGCWC 1 cut(s) 543
Alw26I GTCTC 4 cut(s) 85, 149, 491, 828
Alw44I GTGCAC 1 cut(s) 539
AlwI GGATC 1 cut(s) 515
Ama87I CYCGRG 2 cut(s) 573, 915
AoxI GGCC 1 cut(s) 173
ApaLI GTGCAC 1 cut(s) 539
ApoI RAATTY 2 cut(s) 374, 732
ArsI GACNNNNNNTTYG 2 cut(s) 469, 501
AseI ATTAAT 1 cut(s) 902
AsiGI ACCGGT 1 cut(s) 197
AsuC2I CCSGG 2 cut(s) 916, 917
AsuHPI GGTGA 1 cut(s) 1046
AsuII TTCGAA 1 cut(s) 635
AvaI CYCGRG 2 cut(s) 573, 915
AxyI CCTNAGG 1 cut(s) 210
BaeGI GKGCMC 1 cut(s) 543
BanII GRGCYC 1 cut(s) 234
BbsI GAAGAC 1 cut(s) 984
Bbv12I GWGCWC 1 cut(s) 543
BccI CCATC 3 cut(s) 143, 356, 1073
BceAI ACGGC 2 cut(s) 140, 401
BciT130I CCWGG 2 cut(s) 430, 693
BclI TGATCA 1 cut(s) 118
BcnI CCSGG 2 cut(s) 916, 917
BcoDI GTCTC 4 cut(s) 85, 149, 491, 828
BfaI CTAG 3 cut(s) 341, 765, 809
BfmI CTRYAG 1 cut(s) 715
BglII AGATCT 1 cut(s) 181
BisI GCNGC 1 cut(s) 441
BlsI GCNGC 1 cut(s) 442
BmcAI AGTACT 1 cut(s) 16
Bme1390I CCNGG 4 cut(s) 430, 693, 916, 917
BmeT110I CYCGRG 2 cut(s) 573, 915
BmgBI CACGTC 1 cut(s) 73
BmrFI CCNGG 4 cut(s) 430, 693, 916, 917
BpiI GAAGAC 1 cut(s) 984
BplI GAGNNNNNCTC 2 cut(s) 1211, 1243
BpmI CTGGAG 1 cut(s) 451
Bpu14I TTCGAA 1 cut(s) 635
BpuMI CCSGG 2 cut(s) 916, 917
BsaAI YACGTR 1 cut(s) 1046
BsaHI GRCGYC 1 cut(s) 21
BsaJI CCNNGG 6 cut(s) 385, 691, 915, 916, 965, 1367
BsaWI WCCGGW 1 cut(s) 197
BsaXI ACNNNNNCTCC 2 cut(s) 494, 524
Bsc4I CCNNNNNNNGG 3 cut(s) 692, 992, 996
Bse118I RCCGGY 1 cut(s) 197
Bse1I ACTGG 1 cut(s) 320
Bse21I CCTNAGG 1 cut(s) 210
Bse3DI GCAATG 1 cut(s) 1190
BseBI CCWGG 2 cut(s) 430, 693
BseDI CCNNGG 6 cut(s) 385, 691, 915, 916, 965, 1367
BseGI GGATG 3 cut(s) 381, 1084, 1220
BseLI CCNNNNNNNGG 3 cut(s) 692, 992, 996
BseMI GCAATG 1 cut(s) 1190
BseMII CTCAG 3 cut(s) 201, 324, 918
BseNI ACTGG 1 cut(s) 320
BseRI GAGGAG 2 cut(s) 499, 945
BseSI GKGCMC 1 cut(s) 543
BshFI GGCC 1 cut(s) 175
BshTI ACCGGT 1 cut(s) 197
BsiHKAI GWGCWC 1 cut(s) 543
BsiHKCI CYCGRG 2 cut(s) 573, 915
BsiSI CCGG 2 cut(s) 198, 916
BslFI GGGAC 3 cut(s) 449, 898, 1096
BslI CCNNNNNNNGG 3 cut(s) 692, 992, 996
BsmAI GTCTC 4 cut(s) 85, 149, 491, 828
BsmBI CGTCTC 1 cut(s) 149
BsmFI GGGAC 3 cut(s) 449, 898, 1096
BsmI GAATGC 3 cut(s) 63, 681, 1336
BsnI GGCC 1 cut(s) 175
BsoBI CYCGRG 2 cut(s) 573, 915
Bsp119I TTCGAA 1 cut(s) 635
Bsp1286I GDGCHC 2 cut(s) 234, 543
Bsp1407I TGTACA 1 cut(s) 1321
Bsp143I GATC 4 cut(s) 118, 181, 222, 520
Bsp19I CCATGG 1 cut(s) 1367
BspACI CCGC 3 cut(s) 438, 441, 1118
BspANI GGCC 1 cut(s) 175
BspCNI CTCAG 3 cut(s) 202, 325, 919
BspHI TCATGA 1 cut(s) 496
BspPI GGATC 1 cut(s) 515
BspT104I TTCGAA 1 cut(s) 635
BsrDI GCAATG 1 cut(s) 1190
BsrFI RCCGGY 1 cut(s) 197
BsrGI TGTACA 1 cut(s) 1321
BsrI ACTGG 1 cut(s) 320
BssAI RCCGGY 1 cut(s) 197
BssECI CCNNGG 6 cut(s) 385, 691, 915, 916, 965, 1367
BssMI GATC 4 cut(s) 118, 181, 222, 520
BssNI GRCGYC 1 cut(s) 21
BssT1I CCWWGG 2 cut(s) 385, 1367
Bst2UI CCWGG 2 cut(s) 430, 693
Bst4CI ACNGT 2 cut(s) 164, 1092
BstACI GRCGYC 1 cut(s) 21
BstAUI TGTACA 1 cut(s) 1321
BstBAI YACGTR 1 cut(s) 1046
BstBI TTCGAA 1 cut(s) 635
BstC8I GCNNGC 1 cut(s) 679
BstDEI CTNAG 5 cut(s) 210, 333, 927, 1114, 1210
BstDSI CCRYGG 1 cut(s) 1367
BstF5I GGATG 3 cut(s) 381, 1084, 1220
BstKTI GATC 4 cut(s) 121, 184, 225, 523
BstMAI GTCTC 4 cut(s) 85, 149, 491, 828
BstMBI GATC 4 cut(s) 118, 181, 222, 520
BstMWI GCNNNNNNNGC 1 cut(s) 1158
BstNI CCWGG 2 cut(s) 430, 693
BstNSI RCATGY 1 cut(s) 1184
BstSCI CCNGG 4 cut(s) 428, 691, 914, 915
BstSFI CTRYAG 1 cut(s) 715
BstSLI GKGCMC 1 cut(s) 543
BstV2I GAAGAC 1 cut(s) 984
BstX2I RGATCY 1 cut(s) 181
BstXI CCANNNNNNTGG 1 cut(s) 586
BstYI RGATCY 1 cut(s) 181
Bsu36I CCTNAGG 1 cut(s) 210
BsuRI GGCC 1 cut(s) 175
BtgI CCRYGG 1 cut(s) 1367
BtrI CACGTC 1 cut(s) 73
BtsCI GGATG 3 cut(s) 381, 1084, 1220
BtsIMutI CAGTG 1 cut(s) 330
Cac8I GCNNGC 1 cut(s) 679
CciI TCATGA 1 cut(s) 496
Cfr10I RCCGGY 1 cut(s) 197
Cfr9I CCCGGG 1 cut(s) 915
CseI GACGC 2 cut(s) 29, 131
Csp6I GTAC 3 cut(s) 15, 1165, 1322
CspAI ACCGGT 1 cut(s) 197
CviAII CATG 8 cut(s) 148, 263, 497, 613, 843, 1181, 1203, 1368
CviQI GTAC 3 cut(s) 15, 1165, 1322
DdeI CTNAG 5 cut(s) 210, 333, 927, 1114, 1210
DpnI GATC 4 cut(s) 120, 183, 224, 522
DpnII GATC 4 cut(s) 118, 181, 222, 520
DraI TTTAAA 1 cut(s) 412
Eco130I CCWWGG 2 cut(s) 385, 1367
Eco147I AGGCCT 1 cut(s) 175
Eco24I GRGCYC 1 cut(s) 234
Eco57I CTGAAG 2 cut(s) 27, 198
Eco81I CCTNAGG 1 cut(s) 210
Eco88I CYCGRG 2 cut(s) 573, 915
EcoRII CCWGG 2 cut(s) 428, 691
EcoT14I CCWWGG 2 cut(s) 385, 1367
EcoT38I GRGCYC 1 cut(s) 234
ErhI CCWWGG 2 cut(s) 385, 1367
Esp3I CGTCTC 1 cut(s) 149
FaeI CATG 8 cut(s) 151, 266, 500, 616, 846, 1184, 1206, 1371
FalI AAGNNNNNCTT 2 cut(s) 1097, 1129
FaqI GGGAC 3 cut(s) 449, 898, 1096
FatI CATG 8 cut(s) 147, 262, 496, 612, 842, 1180, 1202, 1367
FauNDI CATATG 1 cut(s) 598
FbaI TGATCA 1 cut(s) 118
FblI GTMKAC 1 cut(s) 159
Fnu4HI GCNGC 1 cut(s) 441
FokI GGATG 3 cut(s) 368, 1091, 1227
FriOI GRGCYC 1 cut(s) 234
Fsp4HI GCNGC 1 cut(s) 441
FspBI CTAG 3 cut(s) 341, 765, 809
GluI GCNGC 1 cut(s) 441
GsuI CTGGAG 1 cut(s) 451
HaeIII GGCC 1 cut(s) 175
HapII CCGG 2 cut(s) 198, 916
HgaI GACGC 2 cut(s) 29, 131
Hin1I GRCGYC 1 cut(s) 21
Hin1II CATG 8 cut(s) 151, 266, 500, 616, 846, 1184, 1206, 1371
HincII GTYRAC 3 cut(s) 160, 195, 924
HindII GTYRAC 3 cut(s) 160, 195, 924
HindIII AAGCTT 2 cut(s) 359, 821
HinfI GANTC 7 cut(s) 344, 632, 641, 980, 1007, 1022, 1304
HpaI GTTAAC 1 cut(s) 924
HpaII CCGG 2 cut(s) 198, 916
HphI GGTGA 1 cut(s) 1046
Hpy166II GTNNAC 8 cut(s) 76, 127, 160, 195, 541, 924, 1178, 1343
Hpy188I TCNGA 1 cut(s) 373
Hpy188III TCNNGA 8 cut(s) 209, 341, 352, 497, 550, 672, 710, 1175
Hpy8I GTNNAC 8 cut(s) 76, 127, 160, 195, 541, 924, 1178, 1343
Hpy99I CGWCG 7 cut(s) 71, 74, 161, 164, 833, 963, 995
HpyAV CCTTC 5 cut(s) 378, 529, 716, 1277, 1294
HpyCH4III ACNGT 2 cut(s) 164, 1092
HpyCH4IV ACGT 3 cut(s) 72, 462, 1045
HpyCH4V TGCA 4 cut(s) 541, 725, 908, 1141
HpyF10VI GCNNNNNNNGC 1 cut(s) 1158
HpyF3I CTNAG 5 cut(s) 210, 333, 927, 1114, 1210
HpySE526I ACGT 3 cut(s) 72, 462, 1045
Hsp92I GRCGYC 1 cut(s) 21
Hsp92II CATG 8 cut(s) 151, 266, 500, 616, 846, 1184, 1206, 1371
Ksp22I TGATCA 1 cut(s) 118
KspAI GTTAAC 1 cut(s) 924
Kzo9I GATC 4 cut(s) 118, 181, 222, 520
MaeI CTAG 3 cut(s) 341, 765, 809
MaeII ACGT 3 cut(s) 72, 462, 1045
MaeIII GTNAC 1 cut(s) 560
MalI GATC 4 cut(s) 120, 183, 224, 522
MboI GATC 4 cut(s) 118, 181, 222, 520
MboII GAAGA 6 cut(s) 191, 635, 641, 989, 1016, 1268
MfeI CAATTG 1 cut(s) 1325
MflI RGATCY 1 cut(s) 181
MhlI GDGCHC 2 cut(s) 234, 543
MluCI AATT 7 cut(s) 270, 374, 732, 899, 903, 1293, 1325
MlyI GAGTC 4 cut(s) 353, 974, 1031, 1313
MnlI CCTC 8 cut(s) 205, 483, 520, 582, 963, 966, 975, 1064
MseI TTAA 5 cut(s) 411, 660, 902, 923, 1109
MslI CAYNNNNRTG 2 cut(s) 584, 601
MspI CCGG 2 cut(s) 198, 916
MspR9I CCNGG 4 cut(s) 430, 693, 916, 917
MunI CAATTG 1 cut(s) 1325
Mva1269I GAATGC 3 cut(s) 63, 681, 1336
MvaI CCWGG 2 cut(s) 430, 693
MwoI GCNNNNNNNGC 1 cut(s) 1158
NciI CCSGG 2 cut(s) 916, 917
NcoI CCATGG 1 cut(s) 1367
NdeI CATATG 1 cut(s) 598
NdeII GATC 4 cut(s) 118, 181, 222, 520
NlaIII CATG 8 cut(s) 151, 266, 500, 616, 846, 1184, 1206, 1371
NmeAIII GCCGAG 1 cut(s) 946
NmuCI GTSAC 1 cut(s) 560
NspI RCATGY 1 cut(s) 1184
NspV TTCGAA 1 cut(s) 635
OliI CACNNNNGTG 1 cut(s) 584
PaeR7I CTCGAG 1 cut(s) 573
PagI TCATGA 1 cut(s) 496
PceI AGGCCT 1 cut(s) 175
PciI ACATGT 1 cut(s) 1180
PcsI WCGNNNNNNNCGW 2 cut(s) 758, 967
PctI GAATGC 3 cut(s) 63, 681, 1336
PfeI GAWTC 3 cut(s) 632, 641, 1007
PfoI TCCNGGA 1 cut(s) 428
PinAI ACCGGT 1 cut(s) 197
PkrI GCNGC 1 cut(s) 442
PleI GAGTC 4 cut(s) 352, 974, 1030, 1312
PpsI GAGTC 4 cut(s) 352, 974, 1030, 1312
Ppu21I YACGTR 1 cut(s) 1046
PscI ACATGT 1 cut(s) 1180
PshBI ATTAAT 1 cut(s) 902
Psp6I CCWGG 2 cut(s) 428, 691
PspGI CCWGG 2 cut(s) 428, 691
PspXI VCTCGAGB 1 cut(s) 573
PsuI RGATCY 1 cut(s) 181
RsaI GTAC 3 cut(s) 16, 1166, 1323
RsaNI GTAC 3 cut(s) 15, 1165, 1322
RseI CAYNNNNRTG 2 cut(s) 584, 601
SalI GTCGAC 1 cut(s) 158
SaqAI TTAA 5 cut(s) 411, 660, 902, 923, 1109
SatI GCNGC 1 cut(s) 441
Sau3AI GATC 4 cut(s) 118, 181, 222, 520
ScaI AGTACT 1 cut(s) 16
SchI GAGTC 4 cut(s) 353, 974, 1031, 1313
ScrFI CCNGG 4 cut(s) 430, 693, 916, 917
SduI GDGCHC 2 cut(s) 234, 543
SfcI CTRYAG 1 cut(s) 715
Sfr274I CTCGAG 1 cut(s) 573
SfuI TTCGAA 1 cut(s) 635
SgrDI CGTCGACG 1 cut(s) 158
SlaI CTCGAG 1 cut(s) 573
SmaI CCCGGG 1 cut(s) 917
SmiMI CAYNNNNRTG 2 cut(s) 584, 601
SmlI CTYRAG 1 cut(s) 573
SmoI CTYRAG 1 cut(s) 573
Sse9I AATT 7 cut(s) 270, 374, 732, 899, 903, 1293, 1325
SseBI AGGCCT 1 cut(s) 175
SsiI CCGC 3 cut(s) 438, 441, 1118
SspMI CTAG 3 cut(s) 341, 765, 809
StuI AGGCCT 1 cut(s) 175
StyD4I CCNGG 4 cut(s) 428, 691, 914, 915
StyI CCWWGG 2 cut(s) 385, 1367
TaaI ACNGT 2 cut(s) 164, 1092
TaiI ACGT 3 cut(s) 75, 465, 1048
TaqI TCGA 6 cut(s) 159, 403, 475, 574, 635, 958
TasI AATT 7 cut(s) 270, 374, 732, 899, 903, 1293, 1325
TatI WGTACW 3 cut(s) 14, 1164, 1321
TauI GCSGC 1 cut(s) 443
TfiI GAWTC 3 cut(s) 632, 641, 1007
Tru1I TTAA 5 cut(s) 411, 660, 902, 923, 1109
Tru9I TTAA 5 cut(s) 411, 660, 902, 923, 1109
TscAI CASTG 1 cut(s) 337
TseFI GTSAC 1 cut(s) 560
Tsp45I GTSAC 1 cut(s) 560
TspDTI ATGAA 6 cut(s) 47, 485, 513, 582, 642, 1296
TspGWI ACGGA 4 cut(s) 471, 750, 846, 1008
TspMI CCCGGG 1 cut(s) 915
TspRI CASTG 1 cut(s) 337
VneI GTGCAC 1 cut(s) 539
VspI ATTAAT 1 cut(s) 902
XapI RAATTY 2 cut(s) 374, 732
XbaI TCTAGA 1 cut(s) 340
XceI RCATGY 1 cut(s) 1184
XhoI CTCGAG 1 cut(s) 573
XmaI CCCGGG 1 cut(s) 915
XmiI GTMKAC 1 cut(s) 159
XspI CTAG 3 cut(s) 341, 765, 809
ZrmI AGTACT 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.