Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015030

Physical Location & Seq

Genomic Coordinates Forward (+)

17349218 .. 17351163

Gene Structure 1946 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G36830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 870 bp

ATGTCAACGGCTCTGATTAACTCTATTACCTACTTCCTCTCCGAACATCCATACATCGTCGGATTCCGTTGGAGTAACAGCCAATCATGGGGCTCCACGTGGTCTTTCCTCTTCACATCAATCTCCCTCTATATCGCCGTCTCATCCTCCCTCCACATCCTCCTCTCCGCCGTACGCCGAAGTAACCGTTCCGTTCCTTTAGGTCACATCCCCGAAATCCACAGCCTTCTCATGTCGATCCTCTCCGCCACCATTTTCGCCGGAATCCTCCTCTCCGCTGCCGCAGAGATCCGTGACACACGGTGGTTATGGCGGCGGAGCAAAACCGCCACTCCTCTCCAATGGCTTCTCTGTTTCCCTCTCGGGACTCGTCCCTCTGGTCGTGTCTTCTTTTGGTCATACGTGTTTTACCTCACGCGCTTTCTCCACATGTTCCGTACGATTTTCGCCGTTTTACGTAGCCGGAGGCTCGCCGTGTCTCAGCTCTTTTGTAACTCCGTCATGGCCTTCACGTCTTTCCTCTGGCTAGAATTCTCGCAGTCGTACCAGATTCTAGCGATTCTATCGACGACTCTGGTTTACTCGGTGGTTTACGGTTATAGATTCTGGACCGGGTTTGGTTTACCCGGTTCGGCTTTCCCTTCGTTTGTGGTGAATTGTCAGTTGGTTCTCGTGGGCTGTAATCTCGTGTCTCACGCTGGGGTTCTTACGATGCACCTCTTTAAAGGTGGATGCAATGGGATTGGCGCGTGGGGTTTAAACTCGGTTCTCAACGGTGCGATTTTGTTGCTTTTTCTTAACTTTTATGTGAGAATGCATTCGCCAATGCGACGCCATATTAATAAAATGAATAGCCAACGTAACGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000038 GO:0001101 GO:0003674 GO:0003824 GO:0004312 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006643 GO:0006665 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009719 GO:0009725 GO:0009737 GO:0009922 GO:0009987 GO:0010033 GO:0012505 GO:0016020 GO:0016021 GO:0016053 GO:0016740 GO:0016746 GO:0016747 GO:0019367 GO:0019368 GO:0019752 GO:0030148 GO:0030176 GO:0030497 GO:0031224 GO:0031227 GO:0031984 GO:0032787 GO:0032870 GO:0033993 GO:0034625 GO:0034626 GO:0042175 GO:0042221 GO:0042761 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046467 GO:0050896 GO:0051716 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0072330 GO:0097305 GO:0097306 GO:0098827 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELO

Protein Analysis

289

Amino Acids

32.78

Weight (kDa)

10.75

Isoelectric Point (pI)

60.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ELO	PF01151	31 - 274	1.3e-39	GNS1/SUR4 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36830 AT4G36830
fragaria_vesca	FvH4_1g14100
malus_domestica	MD02G1155100.v1.1 MD08G1151400.v1.1 MD15G1269600.v1.1
prunus_persica	Prupe.7G148200_v2.0.a1
pyrus_communis	pycom02g12280
rosa_chinensis	RchiOBHm_Chr2g0102761
rosa_laevigata	RLG00000017178
rosa_multiflora	Rmu_sc0006537.1_g000035
rosa_roxburghii	Rroxscaffold_2G00140330
rosa_rugosa	Rorug02G0109400
rosa_samantha	Rh2BG164300 Rh2CG164000
rosa_wichuraiana	Rw2G012240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	418, 749
AciI	CCGC	7 cut(s)	168, 246, 276, 282, 313, 316, 327
AclWI	GGATC	2 cut(s)	232, 283
AcsI	RAATTY	1 cut(s)	530
AcvI	CACGTG	1 cut(s)	99
AcyI	GRCGYC	1 cut(s)	832
AdeI	CACNNNGTG	1 cut(s)	303
AfaI	GTAC	3 cut(s)	174, 439, 545
AfiI	CCNNNNNNNGG	1 cut(s)	88
AflIII	ACRYGT	2 cut(s)	402, 429
AjiI	CACGTC	1 cut(s)	513
AjuI	GAANNNNNNNTTGG	2 cut(s)	647, 679
AluBI	AGCT	1 cut(s)	484
AluI	AGCT	1 cut(s)	484
Alw26I	GTCTC	3 cut(s)	145, 483, 696
AlwI	GGATC	2 cut(s)	232, 283
Ama87I	CYCGRG	1 cut(s)	362
AoxI	GGCC	1 cut(s)	504
ApeKI	GCWGC	1 cut(s)	278
ApoI	RAATTY	1 cut(s)	530
AseI	ATTAAT	1 cut(s)	840
Asp700I	GAANNNNTTC	1 cut(s)	817
AspLEI	GCGC	2 cut(s)	420, 749
AspS9I	GGNCC	1 cut(s)	609
AsuC2I	CCSGG	2 cut(s)	613, 627
AsuHPI	GGTGA	1 cut(s)	664
AvaI	CYCGRG	1 cut(s)	362
AvaII	GGWCC	1 cut(s)	609
BanII	GRGCYC	1 cut(s)	95
BauI	CACGAG	2 cut(s)	671, 686
BbrPI	CACGTG	1 cut(s)	99
BbsI	GAAGAC	1 cut(s)	379
BbvI	GCAGC	1 cut(s)	265
BceAI	ACGGC	5 cut(s)	24, 122, 155, 434, 458
BcgI	CGANNNNNNTGC	2 cut(s)	769, 803
BcnI	CCSGG	2 cut(s)	613, 627
BcoDI	GTCTC	3 cut(s)	145, 483, 696
BfaI	CTAG	2 cut(s)	527, 554
BisI	GCNGC	3 cut(s)	279, 282, 314
BlsI	GCNGC	3 cut(s)	280, 283, 315
Bme1390I	CCNGG	2 cut(s)	613, 627
Bme18I	GGWCC	1 cut(s)	609
BmeT110I	CYCGRG	1 cut(s)	362
BmgBI	CACGTC	1 cut(s)	513
BmgT120I	GGNCC	1 cut(s)	609
BmiI	GGNNCC	1 cut(s)	94
BmrFI	CCNGG	2 cut(s)	613, 627
BmsI	GCATC	2 cut(s)	702, 722
BpiI	GAAGAC	1 cut(s)	379
BpuMI	CCSGG	2 cut(s)	613, 627
BsaAI	YACGTR	3 cut(s)	99, 403, 458
BsaHI	GRCGYC	1 cut(s)	832
BsaXI	ACNNNNNCTCC	4 cut(s)	23, 53, 316, 346
Bsc4I	CCNNNNNNNGG	1 cut(s)	88
Bse3DI	GCAATG	1 cut(s)	742
BseGI	GGATG	5 cut(s)	46, 143, 156, 207, 737
BseLI	CCNNNNNNNGG	1 cut(s)	88
BseMI	GCAATG	1 cut(s)	742
BseMII	CTCAG	1 cut(s)	494
BseRI	GAGGAG	3 cut(s)	152, 260, 324
BseXI	GCAGC	1 cut(s)	265
BseYI	CCCAGC	1 cut(s)	698
Bsh1236I	CGCG	2 cut(s)	418, 749
BshFI	GGCC	1 cut(s)	506
BsiHKCI	CYCGRG	1 cut(s)	362
BsiSI	CCGG	4 cut(s)	261, 463, 612, 627
BsiWI	CGTACG	2 cut(s)	172, 437
BslFI	GGGAC	2 cut(s)	357, 379
BslI	CCNNNNNNNGG	1 cut(s)	88
BsmAI	GTCTC	3 cut(s)	145, 483, 696
BsmBI	CGTCTC	1 cut(s)	145
BsmFI	GGGAC	2 cut(s)	357, 379
BsmI	GAATGC	2 cut(s)	817, 819
BsnI	GGCC	1 cut(s)	506
BsoBI	CYCGRG	1 cut(s)	362
Bsp1286I	GDGCHC	1 cut(s)	95
Bsp143I	GATC	2 cut(s)	237, 288
BspACI	CCGC	7 cut(s)	168, 246, 276, 282, 313, 316, 327
BspANI	GGCC	1 cut(s)	506
BspCNI	CTCAG	1 cut(s)	493
BspFNI	CGCG	2 cut(s)	418, 749
BspLI	GGNNCC	1 cut(s)	94
BspPI	GGATC	2 cut(s)	232, 283
BsrDI	GCAATG	1 cut(s)	742
BssMI	GATC	2 cut(s)	237, 288
BssNI	GRCGYC	1 cut(s)	832
BssSI	CACGAG	2 cut(s)	671, 686
Bst2BI	CACGAG	2 cut(s)	671, 686
Bst4CI	ACNGT	4 cut(s)	188, 303, 596, 776
Bst6I	CTCTTC	1 cut(s)	116
BstACI	GRCGYC	1 cut(s)	832
BstBAI	YACGTR	3 cut(s)	99, 403, 458
BstC8I	GCNNGC	1 cut(s)	471
BstDEI	CTNAG	1 cut(s)	480
BstF5I	GGATG	5 cut(s)	46, 143, 156, 207, 737
BstFNI	CGCG	2 cut(s)	418, 749
BstHHI	GCGC	2 cut(s)	420, 749
BstKTI	GATC	2 cut(s)	240, 291
BstMAI	GTCTC	3 cut(s)	145, 483, 696
BstMBI	GATC	2 cut(s)	237, 288
BstNSI	RCATGY	1 cut(s)	433
BstSCI	CCNGG	2 cut(s)	611, 625
BstSNI	TACGTA	1 cut(s)	458
BstUI	CGCG	2 cut(s)	418, 749
BstV1I	GCAGC	1 cut(s)	265
BstV2I	GAAGAC	1 cut(s)	379
BstX2I	RGATCY	1 cut(s)	288
BstYI	RGATCY	1 cut(s)	288
BsuRI	GGCC	1 cut(s)	506
BtrI	CACGTC	1 cut(s)	513
BtsCI	GGATG	5 cut(s)	46, 143, 156, 207, 737
Cac8I	GCNNGC	1 cut(s)	471
CfoI	GCGC	2 cut(s)	420, 749
Cfr13I	GGNCC	1 cut(s)	609
CseI	GACGC	1 cut(s)	840
Csp6I	GTAC	3 cut(s)	173, 438, 544
CviAII	CATG	4 cut(s)	87, 232, 430, 502
CviQI	GTAC	3 cut(s)	173, 438, 544
DdeI	CTNAG	1 cut(s)	480
DpnI	GATC	2 cut(s)	239, 290
DpnII	GATC	2 cut(s)	237, 288
DraI	TTTAAA	2 cut(s)	724, 759
DraIII	CACNNNGTG	1 cut(s)	303
Eam1104I	CTCTTC	1 cut(s)	116
EarI	CTCTTC	1 cut(s)	116
EciI	GGCGGA	3 cut(s)	157, 235, 331
Eco105I	TACGTA	1 cut(s)	458
Eco24I	GRGCYC	1 cut(s)	95
Eco47I	GGWCC	1 cut(s)	609
Eco72I	CACGTG	1 cut(s)	99
Eco88I	CYCGRG	1 cut(s)	362
EcoRI	GAATTC	1 cut(s)	530
EcoT22I	ATGCAT	1 cut(s)	819
EcoT38I	GRGCYC	1 cut(s)	95
Esp3I	CGTCTC	1 cut(s)	145
FaeI	CATG	4 cut(s)	90, 235, 433, 505
FaqI	GGGAC	2 cut(s)	357, 379
FatI	CATG	4 cut(s)	86, 231, 429, 501
Fnu4HI	GCNGC	3 cut(s)	279, 282, 314
FokI	GGATG	5 cut(s)	33, 130, 143, 194, 744
FriOI	GRGCYC	1 cut(s)	95
Fsp4HI	GCNGC	3 cut(s)	279, 282, 314
FspBI	CTAG	2 cut(s)	527, 554
GlaI	GCGC	2 cut(s)	419, 748
GluI	GCNGC	3 cut(s)	279, 282, 314
GsaI	CCCAGC	1 cut(s)	702
HaeIII	GGCC	1 cut(s)	506
HapII	CCGG	4 cut(s)	261, 463, 612, 627
HgaI	GACGC	1 cut(s)	840
HhaI	GCGC	2 cut(s)	420, 749
Hin1I	GRCGYC	1 cut(s)	832
Hin1II	CATG	4 cut(s)	90, 235, 433, 505
Hin6I	GCGC	2 cut(s)	418, 747
HinP1I	GCGC	2 cut(s)	418, 747
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HinfI	GANTC	7 cut(s)	63, 264, 367, 550, 559, 571, 603
HpaII	CCGG	4 cut(s)	261, 463, 612, 627
HphI	GGTGA	1 cut(s)	664
Hpy166II	GTNNAC	4 cut(s)	6, 580, 592, 623
Hpy188I	TCNGA	3 cut(s)	15, 43, 62
Hpy188III	TCNNGA	2 cut(s)	364, 607
Hpy8I	GTNNAC	4 cut(s)	6, 580, 592, 623
Hpy99I	CGWCG	3 cut(s)	62, 571, 834
HpyAV	CCTTC	3 cut(s)	236, 517, 651
HpyCH4III	ACNGT	4 cut(s)	188, 303, 596, 776
HpyCH4IV	ACGT	5 cut(s)	98, 402, 457, 512, 859
HpyCH4V	TGCA	3 cut(s)	715, 735, 817
HpyF3I	CTNAG	1 cut(s)	480
HpySE526I	ACGT	5 cut(s)	98, 402, 457, 512, 859
Hsp92I	GRCGYC	1 cut(s)	832
Hsp92II	CATG	4 cut(s)	90, 235, 433, 505
HspAI	GCGC	2 cut(s)	418, 747
Kzo9I	GATC	2 cut(s)	237, 288
LmnI	GCTCC	2 cut(s)	98, 318
Lsp1109I	GCAGC	1 cut(s)	265
LweI	GCATC	2 cut(s)	702, 722
MaeI	CTAG	2 cut(s)	527, 554
MaeII	ACGT	5 cut(s)	98, 402, 457, 512, 859
MaeIII	GTNAC	6 cut(s)	74, 182, 203, 293, 491, 860
MalI	GATC	2 cut(s)	239, 290
MboI	GATC	2 cut(s)	237, 288
MboII	GAAGA	2 cut(s)	103, 379
MflI	RGATCY	1 cut(s)	288
MhlI	GDGCHC	1 cut(s)	95
MluCI	AATT	2 cut(s)	530, 655
MlyI	GAGTC	2 cut(s)	361, 565
MmeI	TCCRAC	2 cut(s)	40, 50
Mph1103I	ATGCAT	1 cut(s)	819
MroXI	GAANNNNTTC	1 cut(s)	817
MseI	TTAA	6 cut(s)	18, 723, 758, 798, 840, 868
MspA1I	CMGCKG	1 cut(s)	278
MspI	CCGG	4 cut(s)	261, 463, 612, 627
MspR9I	CCNGG	2 cut(s)	613, 627
MssI	GTTTAAAC	1 cut(s)	759
Mva1269I	GAATGC	2 cut(s)	817, 819
MvnI	CGCG	2 cut(s)	418, 749
NciI	CCSGG	2 cut(s)	613, 627
NdeII	GATC	2 cut(s)	237, 288
NlaIII	CATG	4 cut(s)	90, 235, 433, 505
NlaIV	GGNNCC	1 cut(s)	94
NmuCI	GTSAC	2 cut(s)	203, 293
NsiI	ATGCAT	1 cut(s)	819
NspI	RCATGY	1 cut(s)	433
PciI	ACATGT	1 cut(s)	429
PctI	GAATGC	2 cut(s)	817, 819
PdmI	GAANNNNTTC	1 cut(s)	817
PfeI	GAWTC	5 cut(s)	63, 264, 550, 559, 603
Pfl23II	CGTACG	2 cut(s)	172, 437
PkrI	GCNGC	3 cut(s)	280, 283, 315
PleI	GAGTC	2 cut(s)	361, 565
PmaCI	CACGTG	1 cut(s)	99
PmeI	GTTTAAAC	1 cut(s)	759
PmlI	CACGTG	1 cut(s)	99
PpsI	GAGTC	2 cut(s)	361, 565
Ppu21I	YACGTR	3 cut(s)	99, 403, 458
PscI	ACATGT	1 cut(s)	429
PshBI	ATTAAT	1 cut(s)	840
PspCI	CACGTG	1 cut(s)	99
PspFI	CCCAGC	1 cut(s)	698
PspLI	CGTACG	2 cut(s)	172, 437
PspN4I	GGNNCC	1 cut(s)	94
PspPI	GGNCC	1 cut(s)	609
PsuI	RGATCY	1 cut(s)	288
RsaI	GTAC	3 cut(s)	174, 439, 545
RsaNI	GTAC	3 cut(s)	173, 438, 544
SaqAI	TTAA	6 cut(s)	18, 723, 758, 798, 840, 868
SatI	GCNGC	3 cut(s)	279, 282, 314
Sau3AI	GATC	2 cut(s)	237, 288
Sau96I	GGNCC	1 cut(s)	609
SchI	GAGTC	2 cut(s)	361, 565
ScrFI	CCNGG	2 cut(s)	613, 627
SduI	GDGCHC	1 cut(s)	95
SfaNI	GCATC	2 cut(s)	702, 722
SinI	GGWCC	1 cut(s)	609
SnaBI	TACGTA	1 cut(s)	458
Sse9I	AATT	2 cut(s)	530, 655
SsiI	CCGC	7 cut(s)	168, 246, 276, 282, 313, 316, 327
SspMI	CTAG	2 cut(s)	527, 554
StyD4I	CCNGG	2 cut(s)	611, 625
TaaI	ACNGT	4 cut(s)	188, 303, 596, 776
TaiI	ACGT	5 cut(s)	101, 405, 460, 515, 862
TaqI	TCGA	2 cut(s)	236, 566
TasI	AATT	2 cut(s)	530, 655
TauI	GCSGC	2 cut(s)	284, 316
TfiI	GAWTC	5 cut(s)	63, 264, 550, 559, 603
Tru1I	TTAA	6 cut(s)	18, 723, 758, 798, 840, 868
Tru9I	TTAA	6 cut(s)	18, 723, 758, 798, 840, 868
TseFI	GTSAC	2 cut(s)	203, 293
TseI	GCWGC	1 cut(s)	278
Tsp45I	GTSAC	2 cut(s)	203, 293
TspDTI	ATGAA	1 cut(s)	863
TspGWI	ACGGA	5 cut(s)	56, 181, 281, 425, 487
VpaK11BI	GGWCC	1 cut(s)	609
VspI	ATTAAT	1 cut(s)	840
XapI	RAATTY	1 cut(s)	530
XceI	RCATGY	1 cut(s)	433
XmnI	GAANNNNTTC	1 cut(s)	817
XspI	CTAG	2 cut(s)	527, 554
Zsp2I	ATGCAT	1 cut(s)	819

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.