pycom02g12280

elongation of fatty acids protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
8832800 .. 8833717
918 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g12280.1

Sequence Viewer

Length: 918 bp
ATGTTGGGTCAACCCGCCATCCAGGCCCTCACATTCTGGCTCTCGGAGCACCCCTCCATCGTCGGGTTCCGCTGGTCCCACACCCACTCCTGGGGCTCCACGTGGTCCTTCCTCTTCACCGCCATCGCCGTCTACATAACCCTCTCCATCCTCCTCCACCTCTTCCTCCTCGCCGTTAACCGGTCGGGTCGACCAGTCCCGCTCGGACCTATACCCGCAATCCACAGCCTCGCGATGGCCCTAATATCGTTCACAATCTTCGCCGGCATCACCCTCTCCTCCGCCGCCGAAATTCACGAGACACGGTGGTTCTGGCGGCGGTCCAAAACCCCATTCCAGTGGCTCCTCTGCTTCCCGCTCGGGACCCGGCCGTCGGGTCGGGTATTTTTCTGGTCCTACGTGTACTACCTGTCCAGATTCCCCCACATGCTCCGCACATTCTTCACCATCCTCCGCCGCCGGAAGCTCGTCCCTTTCCAGCTCTTCAACCACTCGATCCTCACCGTCATCTCGTTCCTCTGGCTTGAGTTCTCGCAGTCGATTCAGGTCCTCGCCATCCTCTGCACAACGCTCGTCTACTCCGTCGTTTATGGGTACCGGTTCTGGACCGCAGTGGGGCTGCCGGGCGCGTGTTTTCCGGTGGTGGTGAACTGCCAGATTGCGCTGCTGGGTTGCAACGTGGCGTGCCACGTCGGCGTCCTGATGCTGCATTTCATGAAAGGCGGGTGCAACGGGATTGGCGCGTGGGTGTTCAATTCGGTCCTCAACGGTGTGATTCTGTTGGCATTTTTGAATTTTTACATCAGAATTCATCTGGGGTTTTTCAATAAGAAGGGGAAGGGAAGAGGTGTCAGCAGCGGAGCTGGCGGTGGCGATGCGGCTGCCAAGTCCGTTGGAGTTAAGGACAAGGAGCTTTGA

Protein Analysis

306

Amino Acids

34.11

Weight (kDa)

10.18

Isoelectric Point (pI)

43.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELO PF01151 32 - 271 2.9e-38 GNS1/SUR4 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015030)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36830 AT4G36830
fragaria_vesca FvH4_1g14100
malus_domestica MD02G1155100.v1.1 MD08G1151400.v1.1 MD15G1269600.v1.1
prunus_persica Prupe.7G148200_v2.0.a1
pyrus_communis pycom02g12280
rosa_chinensis RchiOBHm_Chr2g0102761
rosa_laevigata RLG00000017178
rosa_multiflora Rmu_sc0006537.1_g000035
rosa_roxburghii Rroxscaffold_2G00140330
rosa_rugosa Rorug02G0109400
rosa_samantha Rh2BG164300 Rh2CG164000
rosa_wichuraiana Rw2G012240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 370
Acc65I GGTACC 1 cut(s) 594
AccB1I GGYRCC 1 cut(s) 594
AccBSI CCGCTC 2 cut(s) 202, 358
AccI GTMKAC 3 cut(s) 132, 190, 576
AccII CGCG 3 cut(s) 233, 629, 743
AclWI GGATC 1 cut(s) 490
AcoI YGGCCR 1 cut(s) 368
AcsI RAATTY 3 cut(s) 291, 793, 807
AcvI CACGTG 1 cut(s) 102
AcyI GRCGYC 1 cut(s) 696
AfaI GTAC 2 cut(s) 404, 596
AfiI CCNNNNNNNGG 7 cut(s) 63, 90, 91, 180, 235, 373, 615
AflIII ACRYGT 1 cut(s) 399
AgeI ACCGGT 2 cut(s) 180, 597
AgsI TTSAA 4 cut(s) 487, 754, 793, 826
AjiI CACGTC 1 cut(s) 691
AjnI CCWGG 2 cut(s) 21, 89
AjuI GAANNNNNNNTTGG 2 cut(s) 317, 349
AluBI AGCT 4 cut(s) 466, 481, 863, 913
AluI AGCT 4 cut(s) 466, 481, 863, 913
Alw21I GWGCWC 1 cut(s) 51
Alw26I GTCTC 1 cut(s) 293
AlwI GGATC 1 cut(s) 490
Ama87I CYCGRG 1 cut(s) 359
AoxI GGCC 3 cut(s) 24, 237, 368
ApeKI GCWGC 5 cut(s) 619, 664, 706, 855, 881
ApoI RAATTY 3 cut(s) 291, 793, 807
AsiGI ACCGGT 2 cut(s) 180, 597
Asp718I GGTACC 1 cut(s) 594
AspLEI GCGC 3 cut(s) 629, 664, 743
AsuC2I CCSGG 2 cut(s) 367, 624
AsuHPI GGTGA 5 cut(s) 109, 262, 436, 493, 658
AvaI CYCGRG 1 cut(s) 359
AvaII GGWCC 9 cut(s) 75, 105, 206, 321, 363, 393, 547, 606, 760
BanI GGYRCC 1 cut(s) 594
BanII GRGCYC 1 cut(s) 98
BauI CACGAG 1 cut(s) 296
BbrPI CACGTG 1 cut(s) 102
Bbv12I GWGCWC 1 cut(s) 51
BbvI GCAGC 5 cut(s) 606, 651, 693, 867, 868
BccI CCATC 7 cut(s) 26, 65, 131, 155, 229, 455, 563
BceAI ACGGC 3 cut(s) 113, 158, 355
BcgI CGANNNNNNTGC 4 cut(s) 553, 587, 863, 897
BciT130I CCWGG 2 cut(s) 23, 91
BcnI CCSGG 2 cut(s) 367, 624
BcoDI GTCTC 1 cut(s) 293
BglI GCCNNNNNGGC 2 cut(s) 23, 693
BisI GCNGC 9 cut(s) 285, 317, 457, 620, 665, 707, 856, 879, 882
BlsI GCNGC 9 cut(s) 286, 318, 458, 621, 666, 708, 857, 880, 883
Bme1390I CCNGG 4 cut(s) 23, 91, 367, 624
Bme18I GGWCC 9 cut(s) 75, 105, 206, 321, 363, 393, 547, 606, 760
BmeT110I CYCGRG 1 cut(s) 359
BmgBI CACGTC 1 cut(s) 691
BmiI GGNNCC 7 cut(s) 68, 77, 97, 344, 364, 365, 596
BmrFI CCNGG 4 cut(s) 23, 91, 367, 624
BmsI GCATC 3 cut(s) 276, 693, 865
BplI GAGNNNNNCTC 2 cut(s) 38, 70
BpuEI CTTGAG 1 cut(s) 545
BpuMI CCSGG 2 cut(s) 367, 624
BsaAI YACGTR 2 cut(s) 102, 400
BsaHI GRCGYC 1 cut(s) 696
BsaJI CCNNGG 1 cut(s) 90
BsaWI WCCGGW 3 cut(s) 180, 597, 637
BsaXI ACNNNNNCTCC 2 cut(s) 71, 101
Bsc4I CCNNNNNNNGG 7 cut(s) 63, 90, 91, 180, 235, 373, 615
Bse118I RCCGGY 3 cut(s) 180, 263, 597
Bse1I ACTGG 2 cut(s) 194, 337
BseBI CCWGG 2 cut(s) 23, 91
BseDI CCNNGG 1 cut(s) 90
BseGI GGATG 4 cut(s) 18, 147, 447, 555
BseLI CCNNNNNNNGG 7 cut(s) 63, 90, 91, 180, 235, 373, 615
BseNI ACTGG 2 cut(s) 194, 337
BseRI GAGGAG 4 cut(s) 143, 158, 268, 335
BseX3I CGGCCG 1 cut(s) 368
BseXI GCAGC 5 cut(s) 606, 651, 693, 867, 868
BseYI CCCAGC 1 cut(s) 667
BsgI GTGCAG 1 cut(s) 547
Bsh1236I CGCG 3 cut(s) 233, 629, 743
Bsh1285I CGRYCG 2 cut(s) 185, 371
BshFI GGCC 3 cut(s) 26, 239, 370
BshNI GGYRCC 1 cut(s) 594
BshTI ACCGGT 2 cut(s) 180, 597
BsiEI CGRYCG 2 cut(s) 185, 371
BsiHKAI GWGCWC 1 cut(s) 51
BsiHKCI CYCGRG 1 cut(s) 359
BsiSI CCGG 7 cut(s) 181, 264, 367, 460, 598, 623, 638
BslFI GGGAC 4 cut(s) 61, 182, 376, 455
BslI CCNNNNNNNGG 7 cut(s) 63, 90, 91, 180, 235, 373, 615
BsmAI GTCTC 1 cut(s) 293
BsmFI GGGAC 4 cut(s) 61, 182, 376, 455
BsnI GGCC 3 cut(s) 26, 239, 370
BsoBI CYCGRG 1 cut(s) 359
Bsp1286I GDGCHC 2 cut(s) 51, 98
Bsp143I GATC 1 cut(s) 495
Bsp68I TCGCGA 1 cut(s) 233
BspANI GGCC 3 cut(s) 26, 239, 370
BspFNI CGCG 3 cut(s) 233, 629, 743
BspHI TCATGA 1 cut(s) 714
BspLI GGNNCC 7 cut(s) 68, 77, 97, 344, 364, 365, 596
BspPI GGATC 1 cut(s) 490
BspQI GCTCTTC 1 cut(s) 488
BspT107I GGYRCC 1 cut(s) 594
BsrBI CCGCTC 2 cut(s) 202, 358
BsrFI RCCGGY 3 cut(s) 180, 263, 597
BsrI ACTGG 2 cut(s) 194, 337
BssAI RCCGGY 3 cut(s) 180, 263, 597
BssECI CCNNGG 1 cut(s) 90
BssMI GATC 1 cut(s) 495
BssNI GRCGYC 1 cut(s) 696
BssSI CACGAG 1 cut(s) 296
Bst2BI CACGAG 1 cut(s) 296
Bst2UI CCWGG 2 cut(s) 23, 91
Bst4CI ACNGT 3 cut(s) 306, 505, 770
Bst6I CTCTTC 4 cut(s) 119, 167, 488, 838
BstACI GRCGYC 1 cut(s) 696
BstBAI YACGTR 2 cut(s) 102, 400
BstC8I GCNNGC 3 cut(s) 265, 685, 865
BstF5I GGATG 4 cut(s) 18, 147, 447, 555
BstFNI CGCG 3 cut(s) 233, 629, 743
BstHHI GCGC 3 cut(s) 629, 664, 743
BstKTI GATC 1 cut(s) 498
BstMAI GTCTC 1 cut(s) 293
BstMBI GATC 1 cut(s) 495
BstMCI CGRYCG 2 cut(s) 185, 371
BstMWI GCNNNNNNNGC 4 cut(s) 23, 46, 693, 864
BstNI CCWGG 2 cut(s) 23, 91
BstNSI RCATGY 1 cut(s) 430
BstSCI CCNGG 4 cut(s) 21, 89, 365, 622
BstUI CGCG 3 cut(s) 233, 629, 743
BstV1I GCAGC 5 cut(s) 606, 651, 693, 867, 868
BstXI CCANNNNNNTGG 1 cut(s) 339
BstZI CGGCCG 1 cut(s) 368
BsuRI GGCC 3 cut(s) 26, 239, 370
BtgZI GCGATG 3 cut(s) 109, 248, 888
BtrI CACGTC 1 cut(s) 691
BtsCI GGATG 4 cut(s) 18, 147, 447, 555
BtsI GCAGTG 1 cut(s) 618
BtsIMutI CAGTG 2 cut(s) 344, 618
BtuMI TCGCGA 1 cut(s) 233
Cac8I GCNNGC 3 cut(s) 265, 685, 865
CciI TCATGA 1 cut(s) 714
CfoI GCGC 3 cut(s) 629, 664, 743
Cfr10I RCCGGY 3 cut(s) 180, 263, 597
CseI GACGC 1 cut(s) 685
Csp6I GTAC 2 cut(s) 403, 595
CspAI ACCGGT 2 cut(s) 180, 597
CviAII CATG 2 cut(s) 427, 715
CviQI GTAC 2 cut(s) 403, 595
DpnI GATC 1 cut(s) 497
DpnII GATC 1 cut(s) 495
DrdI GACNNNNNNGTC 1 cut(s) 370
DseDI GACNNNNNNGTC 1 cut(s) 370
EaeI YGGCCR 1 cut(s) 368
EagI CGGCCG 1 cut(s) 368
Eam1104I CTCTTC 4 cut(s) 119, 167, 488, 838
EarI CTCTTC 4 cut(s) 119, 167, 488, 838
EciI GGCGGA 2 cut(s) 271, 443
EclXI CGGCCG 1 cut(s) 368
Eco24I GRGCYC 1 cut(s) 98
Eco47I GGWCC 9 cut(s) 75, 105, 206, 321, 363, 393, 547, 606, 760
Eco52I CGGCCG 1 cut(s) 368
Eco72I CACGTG 1 cut(s) 102
Eco88I CYCGRG 1 cut(s) 359
EcoO109I RGGNCCY 3 cut(s) 25, 363, 547
EcoRI GAATTC 1 cut(s) 807
EcoRII CCWGG 2 cut(s) 21, 89
EcoT38I GRGCYC 1 cut(s) 98
FaeI CATG 2 cut(s) 430, 718
FaiI YATR 5 cut(s) 137, 212, 428, 591, 716
FaqI GGGAC 4 cut(s) 61, 182, 376, 455
FatI CATG 2 cut(s) 426, 714
FauI CCCGC 5 cut(s) 22, 207, 223, 363, 716
FblI GTMKAC 3 cut(s) 132, 190, 576
Fnu4HI GCNGC 9 cut(s) 285, 317, 457, 620, 665, 707, 856, 879, 882
FokI GGATG 4 cut(s) 5, 134, 434, 542
FriOI GRGCYC 1 cut(s) 98
Fsp4HI GCNGC 9 cut(s) 285, 317, 457, 620, 665, 707, 856, 879, 882
GlaI GCGC 3 cut(s) 628, 663, 742
GluI GCNGC 9 cut(s) 285, 317, 457, 620, 665, 707, 856, 879, 882
GsaI CCCAGC 1 cut(s) 671
HaeIII GGCC 3 cut(s) 26, 239, 370
HapII CCGG 7 cut(s) 181, 264, 367, 460, 598, 623, 638
HgaI GACGC 1 cut(s) 685
HhaI GCGC 3 cut(s) 629, 664, 743
Hin1I GRCGYC 1 cut(s) 696
Hin1II CATG 2 cut(s) 430, 718
Hin6I GCGC 3 cut(s) 627, 662, 741
HinP1I GCGC 3 cut(s) 627, 662, 741
HincII GTYRAC 3 cut(s) 11, 178, 191
HindII GTYRAC 3 cut(s) 11, 178, 191
HinfI GANTC 3 cut(s) 417, 541, 775
HpaI GTTAAC 1 cut(s) 178
HpaII CCGG 7 cut(s) 181, 264, 367, 460, 598, 623, 638
HphI GGTGA 5 cut(s) 109, 262, 436, 493, 658
Hpy166II GTNNAC 8 cut(s) 11, 133, 178, 191, 252, 403, 577, 649
Hpy188I TCNGA 3 cut(s) 46, 206, 806
Hpy188III TCNNGA 7 cut(s) 232, 296, 361, 414, 604, 700, 715
Hpy8I GTNNAC 8 cut(s) 11, 133, 178, 191, 252, 403, 577, 649
Hpy99I CGWCG 4 cut(s) 65, 376, 587, 695
HpyAV CCTTC 3 cut(s) 118, 826, 832
HpyCH4III ACNGT 3 cut(s) 306, 505, 770
HpyCH4IV ACGT 4 cut(s) 101, 399, 678, 690
HpyCH4V TGCA 4 cut(s) 564, 675, 709, 729
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 46, 693, 864
HpySE526I ACGT 4 cut(s) 101, 399, 678, 690
Hsp92I GRCGYC 1 cut(s) 696
Hsp92II CATG 2 cut(s) 430, 718
HspAI GCGC 3 cut(s) 627, 662, 741
KflI GGGWCCC 1 cut(s) 363
KpnI GGTACC 1 cut(s) 598
KroI GCCGGC 1 cut(s) 263
KroNI GCCGGC 1 cut(s) 265
KspAI GTTAAC 1 cut(s) 178
Kzo9I GATC 1 cut(s) 495
LguI GCTCTTC 1 cut(s) 488
LmnI GCTCC 6 cut(s) 46, 101, 348, 435, 860, 910
Lsp1109I GCAGC 5 cut(s) 606, 651, 693, 867, 868
LweI GCATC 3 cut(s) 276, 693, 865
MaeII ACGT 4 cut(s) 101, 399, 678, 690
MalI GATC 1 cut(s) 497
MbiI CCGCTC 2 cut(s) 202, 358
MboI GATC 1 cut(s) 495
MboII GAAGA 6 cut(s) 106, 154, 250, 433, 475, 855
MhlI GDGCHC 2 cut(s) 51, 98
MluCI AATT 4 cut(s) 291, 754, 793, 807
MmeI TCCRAC 1 cut(s) 874
MroNI GCCGGC 1 cut(s) 263
MseI TTAA 2 cut(s) 177, 900
MslI CAYNNNNRTG 1 cut(s) 337
MspA1I CMGCKG 2 cut(s) 72, 858
MspI CCGG 7 cut(s) 181, 264, 367, 460, 598, 623, 638
MspR9I CCNGG 4 cut(s) 23, 91, 367, 624
MvaI CCWGG 2 cut(s) 23, 91
MvnI CGCG 3 cut(s) 233, 629, 743
MwoI GCNNNNNNNGC 4 cut(s) 23, 46, 693, 864
NaeI GCCGGC 1 cut(s) 265
NciI CCSGG 2 cut(s) 367, 624
NdeII GATC 1 cut(s) 495
NgoMIV GCCGGC 1 cut(s) 263
NlaIII CATG 2 cut(s) 430, 718
NlaIV GGNNCC 7 cut(s) 68, 77, 97, 344, 364, 365, 596
NruI TCGCGA 1 cut(s) 233
NspI RCATGY 1 cut(s) 430
PagI TCATGA 1 cut(s) 714
PciSI GCTCTTC 1 cut(s) 488
PcsI WCGNNNNNNNCGW 1 cut(s) 579
PdiI GCCGGC 1 cut(s) 265
PfeI GAWTC 3 cut(s) 417, 541, 775
PinAI ACCGGT 2 cut(s) 180, 597
PkrI GCNGC 9 cut(s) 286, 318, 458, 621, 666, 708, 857, 880, 883
PmaCI CACGTG 1 cut(s) 102
PmlI CACGTG 1 cut(s) 102
Ppu21I YACGTR 2 cut(s) 102, 400
PpuMI RGGWCCY 2 cut(s) 363, 547
Psp5II RGGWCCY 2 cut(s) 363, 547
Psp6I CCWGG 2 cut(s) 21, 89
PspCI CACGTG 1 cut(s) 102
PspFI CCCAGC 1 cut(s) 667
PspGI CCWGG 2 cut(s) 21, 89
PspN4I GGNNCC 7 cut(s) 68, 77, 97, 344, 364, 365, 596
PspPPI RGGWCCY 2 cut(s) 363, 547
RruI TCGCGA 1 cut(s) 233
RsaI GTAC 2 cut(s) 404, 596
RsaNI GTAC 2 cut(s) 403, 595
RseI CAYNNNNRTG 1 cut(s) 337
SalI GTCGAC 1 cut(s) 189
SapI GCTCTTC 1 cut(s) 488
SaqAI TTAA 2 cut(s) 177, 900
SatI GCNGC 9 cut(s) 285, 317, 457, 620, 665, 707, 856, 879, 882
Sau3AI GATC 1 cut(s) 495
ScrFI CCNGG 4 cut(s) 23, 91, 367, 624
SduI GDGCHC 2 cut(s) 51, 98
SfaNI GCATC 3 cut(s) 276, 693, 865
SinI GGWCC 9 cut(s) 75, 105, 206, 321, 363, 393, 547, 606, 760
SmiMI CAYNNNNRTG 1 cut(s) 337
SmlI CTYRAG 1 cut(s) 524
SmoI CTYRAG 1 cut(s) 524
Sse9I AATT 4 cut(s) 291, 754, 793, 807
StyD4I CCNGG 4 cut(s) 21, 89, 365, 622
TaaI ACNGT 3 cut(s) 306, 505, 770
TaiI ACGT 4 cut(s) 104, 402, 681, 693
TaqI TCGA 3 cut(s) 190, 494, 539
TaqII GACCGA 1 cut(s) 748
TasI AATT 4 cut(s) 291, 754, 793, 807
TatI WGTACW 1 cut(s) 402
TauI GCSGC 4 cut(s) 287, 319, 459, 881
TfiI GAWTC 3 cut(s) 417, 541, 775
Tru1I TTAA 2 cut(s) 177, 900
Tru9I TTAA 2 cut(s) 177, 900
TscAI CASTG 2 cut(s) 344, 618
TseI GCWGC 5 cut(s) 619, 664, 706, 855, 881
TspDTI ATGAA 3 cut(s) 703, 731, 800
TspGWI ACGGA 2 cut(s) 571, 880
TspRI CASTG 2 cut(s) 344, 618
VpaK11BI GGWCC 9 cut(s) 75, 105, 206, 321, 363, 393, 547, 606, 760
XapI RAATTY 3 cut(s) 291, 793, 807
XceI RCATGY 1 cut(s) 430
XmiI GTMKAC 3 cut(s) 132, 190, 576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.