FvH4_1g14100

elongation of fatty acids protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
7797874 .. 7799557
1684 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g14100.t1

Sequence Viewer

Length: 1182 bp
ATGATATCACATATCAACACACCACCACAAATCAAAACCTCCCACGTACACCTTCCCAAAAATGCAGCTTCCAATACGTCCTCCTCTTTATACCCACCACCTATTTCCGCTCTTCTTCTTCACTACCTCCCGTTCTCTCCACCAATTCCCAACCCCCCTCTGAATGTACGACTCCGAGTGAACCCAGGCACCACCACCGGAGCCACCACCCCCATCTTGACCCTCCCCCCACCCAACACCCCTCAACCGGAGCACCGTGTTGATCCATCACCGGTGGCAGCGTTGATGGGTCAGCCCGTGATCCAGACCCTCACGTTCTGGCTCTCGGAGCACCCATCAATCGTCGGGTTCCGTTGGTCCCACGCCCACTCCTGGGGCTCCACCTGGTCCTTCCTCTTCACCGCCATCTCCCTCTACCTCCTCCTCTCCCTCCTCCTCCACCTCCTCCTCTCCCTCCTCCGCCGCCCCGTCCCTCTCGGCCCCCTCCCCGCTTTCCACTCCCTCCTCATGACCCTCCTCTCCTTCACCATCTTCGCCGGCATCACCCTCTCCTCCGTAGCCGAAATCCGCGATACCCGCTGGTTCTGGCGCCGCTCCAAAACCCCCTTCCAATGGCTCCTCTGCTTCCCTCTCGGCACTCGCCCCTCGGGTCGGGTCTTCTTCTGGTCCTACATCTACTACCTCTCTCGCTTCTTGCACATGATCCGGACGTTCTTTACGATCCTCCGCCGCGGGAAGCTAGTCCCCTTTCAGCTCTTCAACCACTCCATCCTCACATTCATGGCCTTCATCTGGTTGGAATTCTCGCAGTCGTTTCAAGTGCTGGCTATACTTTCGACAACTTTGGTGTACGCTGTTGTGTATGCGTATAGATTCTGGATTGCGATCGGGCTGCCAAGAGCGTGTTTTGCGTTCGTGGTGAACTGCCAGATGCTGCTGCTGGGGTGCAATGTGGCCTGCCATGTTGGCGTTCTGATGATGCATTTTATGAAAGGAGGGTGTAATGGGATCGGGGCGTGGGGGTTCAATTCGGTGCTGAATGCGGTGATTCTGCTGTTGTTTTTGAACTTCTATGTGAAGATTCATTGGGGTTATGGGAAGGCGGCGTTGGCTAAAGTGGAGGAGGCGGAAGCGAAGGCGGAGGAGGAGGAGCAGGTTAGAGCGAAGGACAAAGTGATTTGA

Protein Analysis

394

Amino Acids

44.4

Weight (kDa)

9.88

Isoelectric Point (pI)

49.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELO PF01151 126 - 362 1.5e-37 GNS1/SUR4 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015030)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36830 AT4G36830
fragaria_vesca FvH4_1g14100
malus_domestica MD02G1155100.v1.1 MD08G1151400.v1.1 MD15G1269600.v1.1
prunus_persica Prupe.7G148200_v2.0.a1
pyrus_communis pycom02g12280
rosa_chinensis RchiOBHm_Chr2g0102761
rosa_laevigata RLG00000017178
rosa_multiflora Rmu_sc0006537.1_g000035
rosa_roxburghii Rroxscaffold_2G00140330
rosa_rugosa Rorug02G0109400
rosa_samantha Rh2BG164300 Rh2CG164000
rosa_wichuraiana Rw2G012240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1144
AccB1I GGYRCC 2 cut(s) 188, 588
AccBSI CCGCTC 2 cut(s) 110, 594
AccII CGCG 2 cut(s) 570, 732
AccIII TCCGGA 1 cut(s) 705
AclWI GGATC 5 cut(s) 257, 295, 697, 715, 1016
AcsI RAATTY 1 cut(s) 800
AcyI GRCGYC 1 cut(s) 589
AfaI GTAC 3 cut(s) 48, 168, 851
AfiI CCNNNNNNNGG 6 cut(s) 247, 372, 373, 612, 651, 792
AgeI ACCGGT 1 cut(s) 271
AgsI TTSAA 4 cut(s) 760, 818, 1027, 1066
AjnI CCWGG 3 cut(s) 184, 371, 383
AjuI GAANNNNNNNTTGG 4 cut(s) 590, 622, 1091, 1123
AluBI AGCT 3 cut(s) 68, 739, 754
AluI AGCT 3 cut(s) 68, 739, 754
Alw21I GWGCWC 2 cut(s) 255, 333
AlwI GGATC 5 cut(s) 257, 295, 697, 715, 1016
AlwNI CAGNNNCTG 1 cut(s) 934
Ama87I CYCGRG 1 cut(s) 646
Aor13HI TCCGGA 1 cut(s) 705
AoxI GGCC 3 cut(s) 478, 783, 954
ApeKI GCWGC 5 cut(s) 65, 278, 892, 934, 937
ApoI RAATTY 1 cut(s) 800
AsiGI ACCGGT 1 cut(s) 271
AspLEI GCGC 1 cut(s) 591
AspS9I GGNCC 4 cut(s) 357, 387, 479, 666
AsuHPI GGTGA 6 cut(s) 261, 391, 517, 535, 931, 1057
AvaI CYCGRG 1 cut(s) 646
AvaII GGWCC 3 cut(s) 357, 387, 666
BanI GGYRCC 2 cut(s) 188, 588
BanII GRGCYC 1 cut(s) 380
BbsI GAAGAC 1 cut(s) 649
Bbv12I GWGCWC 2 cut(s) 255, 333
BbvI GCAGC 5 cut(s) 77, 290, 879, 921, 924
BccI CCATC 7 cut(s) 221, 274, 280, 343, 413, 536, 776
BcgI CGANNNNNNTGC 2 cut(s) 874, 908
BciT130I CCWGG 3 cut(s) 186, 373, 385
BfaI CTAG 1 cut(s) 740
BfoI RGCGCY 1 cut(s) 592
BfuAI ACCTGC 1 cut(s) 1144
BglI GCCNNNNNGGC 1 cut(s) 966
BisI GCNGC 9 cut(s) 66, 279, 463, 592, 730, 893, 935, 938, 1104
BlsI GCNGC 9 cut(s) 67, 280, 464, 593, 731, 894, 936, 939, 1105
Bme1390I CCNGG 3 cut(s) 186, 373, 385
Bme18I GGWCC 3 cut(s) 357, 387, 666
BmeT110I CYCGRG 1 cut(s) 646
BmgT120I GGNCC 4 cut(s) 357, 387, 479, 666
BmiI GGNNCC 8 cut(s) 190, 202, 350, 359, 379, 481, 590, 617
BmrFI CCNGG 3 cut(s) 186, 373, 385
BmsI GCATC 3 cut(s) 549, 921, 969
BpiI GAAGAC 1 cut(s) 649
BsaAI YACGTR 1 cut(s) 46
BsaBI GATNNNNATC 1 cut(s) 884
BsaHI GRCGYC 1 cut(s) 589
BsaJI CCNNGG 4 cut(s) 184, 372, 645, 730
BsaWI WCCGGW 4 cut(s) 197, 247, 271, 705
BsaXI ACNNNNNCTCC 2 cut(s) 353, 383
Bsc4I CCNNNNNNNGG 6 cut(s) 247, 372, 373, 612, 651, 792
Bse118I RCCGGY 2 cut(s) 271, 536
Bse3DI GCAATG 1 cut(s) 955
Bse8I GATNNNNATC 1 cut(s) 884
BseAI TCCGGA 1 cut(s) 705
BseBI CCWGG 3 cut(s) 186, 373, 385
BseDI CCNNGG 4 cut(s) 184, 372, 645, 730
BseGI GGATG 1 cut(s) 768
BseJI GATNNNNATC 1 cut(s) 884
BseLI CCNNNNNNNGG 6 cut(s) 247, 372, 373, 612, 651, 792
BseMI GCAATG 1 cut(s) 955
BseXI GCAGC 5 cut(s) 77, 290, 879, 921, 924
BseYI CCCAGC 1 cut(s) 940
Bsh1236I CGCG 2 cut(s) 570, 732
Bsh1285I CGRYCG 1 cut(s) 888
BshFI GGCC 3 cut(s) 480, 785, 956
BshNI GGYRCC 2 cut(s) 188, 588
BshTI ACCGGT 1 cut(s) 271
BsiEI CGRYCG 1 cut(s) 888
BsiHKAI GWGCWC 2 cut(s) 255, 333
BsiHKCI CYCGRG 1 cut(s) 646
BsiSI CCGG 5 cut(s) 198, 248, 272, 537, 706
BslFI GGGAC 3 cut(s) 343, 455, 728
BslI CCNNNNNNNGG 6 cut(s) 247, 372, 373, 612, 651, 792
BsmFI GGGAC 3 cut(s) 343, 455, 728
BsmI GAATGC 1 cut(s) 1045
BsnI GGCC 3 cut(s) 480, 785, 956
BsoBI CYCGRG 1 cut(s) 646
Bsp1286I GDGCHC 3 cut(s) 255, 333, 380
Bsp13I TCCGGA 1 cut(s) 705
Bsp143I GATC 6 cut(s) 262, 300, 702, 720, 885, 1008
BspANI GGCC 3 cut(s) 480, 785, 956
BspEI TCCGGA 1 cut(s) 705
BspFNI CGCG 2 cut(s) 570, 732
BspHI TCATGA 1 cut(s) 507
BspLI GGNNCC 8 cut(s) 190, 202, 350, 359, 379, 481, 590, 617
BspMI ACCTGC 1 cut(s) 1144
BspPI GGATC 5 cut(s) 257, 295, 697, 715, 1016
BspQI GCTCTTC 2 cut(s) 117, 761
BspT107I GGYRCC 2 cut(s) 188, 588
BsrBI CCGCTC 2 cut(s) 110, 594
BsrDI GCAATG 1 cut(s) 955
BsrFI RCCGGY 2 cut(s) 271, 536
BssAI RCCGGY 2 cut(s) 271, 536
BssECI CCNNGG 4 cut(s) 184, 372, 645, 730
BssMI GATC 6 cut(s) 262, 300, 702, 720, 885, 1008
BssNI GRCGYC 1 cut(s) 589
Bst2UI CCWGG 3 cut(s) 186, 373, 385
Bst4CI ACNGT 1 cut(s) 257
Bst6I CTCTTC 3 cut(s) 117, 401, 761
BstACI GRCGYC 1 cut(s) 589
BstBAI YACGTR 1 cut(s) 46
BstC8I GCNNGC 3 cut(s) 538, 825, 958
BstDSI CCRYGG 1 cut(s) 730
BstF5I GGATG 1 cut(s) 768
BstFNI CGCG 2 cut(s) 570, 732
BstH2I RGCGCY 1 cut(s) 592
BstHHI GCGC 1 cut(s) 591
BstKTI GATC 6 cut(s) 265, 303, 705, 723, 888, 1011
BstMBI GATC 6 cut(s) 262, 300, 702, 720, 885, 1008
BstMCI CGRYCG 1 cut(s) 888
BstMWI GCNNNNNNNGC 5 cut(s) 328, 576, 908, 966, 1109
BstNI CCWGG 3 cut(s) 186, 373, 385
BstSCI CCNGG 3 cut(s) 184, 371, 383
BstUI CGCG 2 cut(s) 570, 732
BstV1I GCAGC 5 cut(s) 77, 290, 879, 921, 924
BstV2I GAAGAC 1 cut(s) 649
BsuRI GGCC 3 cut(s) 480, 785, 956
BtgI CCRYGG 1 cut(s) 730
BtsCI GGATG 1 cut(s) 768
BveI ACCTGC 1 cut(s) 1144
Cac8I GCNNGC 3 cut(s) 538, 825, 958
CaiI CAGNNNCTG 1 cut(s) 934
CciI TCATGA 1 cut(s) 507
CfoI GCGC 1 cut(s) 591
Cfr10I RCCGGY 2 cut(s) 271, 536
Cfr13I GGNCC 4 cut(s) 357, 387, 479, 666
Cfr42I CCGCGG 1 cut(s) 733
CsiI ACCWGGT 1 cut(s) 383
Csp6I GTAC 3 cut(s) 47, 167, 850
CspAI ACCGGT 1 cut(s) 271
CviAII CATG 4 cut(s) 508, 700, 781, 962
CviQI GTAC 3 cut(s) 47, 167, 850
DinI GGCGCC 1 cut(s) 590
DpnI GATC 6 cut(s) 264, 302, 704, 722, 887, 1010
DpnII GATC 6 cut(s) 262, 300, 702, 720, 885, 1008
Eam1104I CTCTTC 3 cut(s) 117, 401, 761
EarI CTCTTC 3 cut(s) 117, 401, 761
EciI GGCGGA 4 cut(s) 449, 716, 1142, 1154
Eco24I GRGCYC 1 cut(s) 380
Eco32I GATATC 1 cut(s) 6
Eco47I GGWCC 3 cut(s) 357, 387, 666
Eco88I CYCGRG 1 cut(s) 646
EcoRI GAATTC 1 cut(s) 800
EcoRII CCWGG 3 cut(s) 184, 371, 383
EcoRV GATATC 1 cut(s) 6
EcoT22I ATGCAT 1 cut(s) 984
EcoT38I GRGCYC 1 cut(s) 380
EgeI GGCGCC 1 cut(s) 590
EheI GGCGCC 1 cut(s) 590
FaeI CATG 4 cut(s) 511, 703, 784, 965
FaqI GGGAC 3 cut(s) 343, 455, 728
FatI CATG 4 cut(s) 507, 699, 780, 961
FauI CCCGC 3 cut(s) 496, 584, 725
Fnu4HI GCNGC 9 cut(s) 66, 279, 463, 592, 730, 893, 935, 938, 1104
FokI GGATG 1 cut(s) 755
FriOI GRGCYC 1 cut(s) 380
Fsp4HI GCNGC 9 cut(s) 66, 279, 463, 592, 730, 893, 935, 938, 1104
FspBI CTAG 1 cut(s) 740
GlaI GCGC 1 cut(s) 590
GluI GCNGC 9 cut(s) 66, 279, 463, 592, 730, 893, 935, 938, 1104
GsaI CCCAGC 1 cut(s) 944
HaeII RGCGCY 1 cut(s) 592
HaeIII GGCC 3 cut(s) 480, 785, 956
HapII CCGG 5 cut(s) 198, 248, 272, 537, 706
HhaI GCGC 1 cut(s) 591
Hin1I GRCGYC 1 cut(s) 589
Hin1II CATG 4 cut(s) 511, 703, 784, 965
Hin6I GCGC 1 cut(s) 589
HinP1I GCGC 1 cut(s) 589
HinfI GANTC 4 cut(s) 171, 873, 1048, 1081
HpaII CCGG 5 cut(s) 198, 248, 272, 537, 706
HphI GGTGA 6 cut(s) 261, 391, 517, 535, 931, 1057
Hpy166II GTNNAC 4 cut(s) 49, 181, 850, 922
Hpy188I TCNGA 4 cut(s) 162, 176, 328, 975
Hpy188III TCNNGA 5 cut(s) 217, 304, 508, 706, 877
Hpy8I GTNNAC 4 cut(s) 49, 181, 850, 922
Hpy99I CGWCG 1 cut(s) 347
HpyAV CCTTC 8 cut(s) 62, 400, 532, 616, 796, 1093, 1129, 1159
HpyCH4III ACNGT 1 cut(s) 257
HpyCH4IV ACGT 4 cut(s) 45, 77, 314, 710
HpyCH4V TGCA 4 cut(s) 65, 697, 948, 982
HpyF10VI GCNNNNNNNGC 5 cut(s) 328, 576, 908, 966, 1109
HpySE526I ACGT 4 cut(s) 45, 77, 314, 710
Hsp92I GRCGYC 1 cut(s) 589
Hsp92II CATG 4 cut(s) 511, 703, 784, 965
HspAI GCGC 1 cut(s) 589
KasI GGCGCC 1 cut(s) 588
Kpn2I TCCGGA 1 cut(s) 705
KroI GCCGGC 1 cut(s) 536
KroNI GCCGGC 1 cut(s) 538
KspI CCGCGG 1 cut(s) 733
Kzo9I GATC 6 cut(s) 262, 300, 702, 720, 885, 1008
LguI GCTCTTC 2 cut(s) 117, 761
LmnI GCTCC 7 cut(s) 200, 250, 328, 383, 599, 621, 1150
Lsp1109I GCAGC 5 cut(s) 77, 290, 879, 921, 924
LweI GCATC 3 cut(s) 549, 921, 969
MabI ACCWGGT 1 cut(s) 383
MaeI CTAG 1 cut(s) 740
MaeII ACGT 4 cut(s) 45, 77, 314, 710
MalI GATC 6 cut(s) 264, 302, 704, 722, 887, 1010
MbiI CCGCTC 2 cut(s) 110, 594
MboI GATC 6 cut(s) 262, 300, 702, 720, 885, 1008
MboII GAAGA 9 cut(s) 104, 107, 110, 388, 523, 649, 652, 748, 1090
MhlI GDGCHC 3 cut(s) 255, 333, 380
MluCI AATT 3 cut(s) 144, 800, 1027
Mly113I GGCGCC 1 cut(s) 589
MlyI GAGTC 1 cut(s) 165
MmeI TCCRAC 1 cut(s) 777
Mph1103I ATGCAT 1 cut(s) 984
MroI TCCGGA 1 cut(s) 705
MroNI GCCGGC 1 cut(s) 536
MslI CAYNNNNRTG 1 cut(s) 779
MspA1I CMGCKG 2 cut(s) 579, 732
MspI CCGG 5 cut(s) 198, 248, 272, 537, 706
MspR9I CCNGG 3 cut(s) 186, 373, 385
Mva1269I GAATGC 1 cut(s) 1045
MvaI CCWGG 3 cut(s) 186, 373, 385
MvnI CGCG 2 cut(s) 570, 732
MwoI GCNNNNNNNGC 5 cut(s) 328, 576, 908, 966, 1109
NaeI GCCGGC 1 cut(s) 538
NarI GGCGCC 1 cut(s) 589
NdeII GATC 6 cut(s) 262, 300, 702, 720, 885, 1008
NgoMIV GCCGGC 1 cut(s) 536
NlaIII CATG 4 cut(s) 511, 703, 784, 965
NlaIV GGNNCC 8 cut(s) 190, 202, 350, 359, 379, 481, 590, 617
NmeAIII GCCGAG 2 cut(s) 456, 612
NsiI ATGCAT 1 cut(s) 984
PagI TCATGA 1 cut(s) 507
PciSI GCTCTTC 2 cut(s) 117, 761
PcsI WCGNNNNNNNCGW 1 cut(s) 716
PctI GAATGC 1 cut(s) 1045
PdiI GCCGGC 1 cut(s) 538
PfeI GAWTC 3 cut(s) 873, 1048, 1081
PinAI ACCGGT 1 cut(s) 271
PkrI GCNGC 9 cut(s) 67, 280, 464, 593, 731, 894, 936, 939, 1105
Ple19I CGATCG 1 cut(s) 888
PleI GAGTC 1 cut(s) 165
PluTI GGCGCC 1 cut(s) 592
PpsI GAGTC 1 cut(s) 165
Ppu21I YACGTR 1 cut(s) 46
Psp6I CCWGG 3 cut(s) 184, 371, 383
PspFI CCCAGC 1 cut(s) 940
PspGI CCWGG 3 cut(s) 184, 371, 383
PspN4I GGNNCC 8 cut(s) 190, 202, 350, 359, 379, 481, 590, 617
PspPI GGNCC 4 cut(s) 357, 387, 479, 666
PstNI CAGNNNCTG 1 cut(s) 934
PvuI CGATCG 1 cut(s) 888
RsaI GTAC 3 cut(s) 48, 168, 851
RsaNI GTAC 3 cut(s) 47, 167, 850
RseI CAYNNNNRTG 1 cut(s) 779
SacII CCGCGG 1 cut(s) 733
SapI GCTCTTC 2 cut(s) 117, 761
SatI GCNGC 9 cut(s) 66, 279, 463, 592, 730, 893, 935, 938, 1104
Sau3AI GATC 6 cut(s) 262, 300, 702, 720, 885, 1008
Sau96I GGNCC 4 cut(s) 357, 387, 479, 666
SchI GAGTC 1 cut(s) 165
ScrFI CCNGG 3 cut(s) 186, 373, 385
SduI GDGCHC 3 cut(s) 255, 333, 380
SexAI ACCWGGT 1 cut(s) 383
SfaNI GCATC 3 cut(s) 549, 921, 969
SfoI GGCGCC 1 cut(s) 590
Sfr303I CCGCGG 1 cut(s) 733
SgrAI CRCCGGYG 1 cut(s) 271
SgrBI CCGCGG 1 cut(s) 733
SinI GGWCC 3 cut(s) 357, 387, 666
SmiMI CAYNNNNRTG 1 cut(s) 779
Sse9I AATT 3 cut(s) 144, 800, 1027
SspDI GGCGCC 1 cut(s) 588
SspMI CTAG 1 cut(s) 740
StyD4I CCNGG 3 cut(s) 184, 371, 383
TaaI ACNGT 1 cut(s) 257
TaiI ACGT 4 cut(s) 48, 80, 317, 713
TaqI TCGA 1 cut(s) 836
TasI AATT 3 cut(s) 144, 800, 1027
TauI GCSGC 4 cut(s) 465, 594, 732, 1106
TfiI GAWTC 3 cut(s) 873, 1048, 1081
TseI GCWGC 5 cut(s) 65, 278, 892, 934, 937
TspDTI ATGAA 4 cut(s) 769, 778, 1004, 1073
TspGWI ACGGA 2 cut(s) 341, 544
VpaK11BI GGWCC 3 cut(s) 357, 387, 666
XapI RAATTY 1 cut(s) 800
XspI CTAG 1 cut(s) 740
Zsp2I ATGCAT 1 cut(s) 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.