Rmu_sc0006537.1_g000035

elongation of fatty acids protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006537.1
Physical Location & Seq
Forward (+)
132305 .. 134332
2028 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006537.1_g000035.1.cds

Sequence Viewer

Length: 1353 bp
atgattatatggggtttgtggaaaagtcgaaataacaaattgtgggaaggcaaagtgcagtcagcaaatgacattctgctgggatgctttacatggcttgaaggatttcacaaagctagcatgagtaatactttagcagccccaaaaactactaagaaatggcaagctgctgcaactcctaagctaaatgttgatggagcatttatcctgcaagaatcatatggtggaactggaggagttttaagagactcaaatggagtctttcaagctgctttctcaaagccggtgttccaatacgtcctctcctcggctttatacccaccagccattttcaccccggctcttcttcactacctctcattctctctctctctccgaattcccaacccaccgttgaatgtacgactcccactgaaccagccccaccggagccaccctatcttgacctaccccgtcaccccagacatccctcccaccctgaccagcccccgccttcttgatccatcaccggcaacgttgatgggtcggtccgtgatccagactctcacgttctggctctcggagcacccatcaatcgtcgggttccggtggtctcacgccaactcctggggatccacatggtccttcctcttcaccgccatcgccctttacctaactatctccgtcctccttcacctcctcctcgccctcctccgccgcaagggtcgacccgtccctctcggacctatccccgccctccactccttcttcatgaccctcctctctttcaccatcttcgccggcatcacactctcctccgccgccgaaatcaaagaaaccaaatggttctggcggcgctccaaaacccccttccagtggctcctctgcttccccctcgggacccgcccctcgggtcgggtcttcttctggtcctacatctactacctttcccgcttcttccacatgatccgcacattcttcaccatcctccgccgcggcagattagtccccttccagctcttcaaccactccatcctcaccttcatctccttcatgtggctagaattctcgcagtctttccaagtgcttgccatactttcgactacgttggtgtattctgttgtttatgcttatcggttttgggtctcaatcgggctgccgcgggccggcttcgcgttcgtggtgaactgccagatgcttctgctgggctgcaatgtggcctgccacgttggggttctgctgatgcatttcatgaaaggcgggtgtaatggaatcggggcttggggtttcaattcggtgctgaatgcggtgattctgttgctgttcttgaacttctacgtgaagatacattggggttatgggaggagggtctga

Protein Analysis

450

Amino Acids

51.05

Weight (kDa)

10.33

Isoelectric Point (pI)

44.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015030)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36830 AT4G36830
fragaria_vesca FvH4_1g14100
malus_domestica MD02G1155100.v1.1 MD08G1151400.v1.1 MD15G1269600.v1.1
prunus_persica Prupe.7G148200_v2.0.a1
pyrus_communis pycom02g12280
rosa_chinensis RchiOBHm_Chr2g0102761
rosa_laevigata RLG00000017178
rosa_multiflora Rmu_sc0006537.1_g000035
rosa_roxburghii Rroxscaffold_2G00140330
rosa_rugosa Rorug02G0109400
rosa_samantha Rh2BG164300 Rh2CG164000
rosa_wichuraiana Rw2G012240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 606
AccI GTMKAC 1 cut(s) 706
AccII CGCG 3 cut(s) 975, 1141, 1154
AclI AACGTT 1 cut(s) 515
AclWI GGATC 5 cut(s) 494, 529, 606, 619, 940
AcsI RAATTY 2 cut(s) 378, 1043
AfaI GTAC 1 cut(s) 402
AfiI CCNNNNNNNGG 9 cut(s) 307, 606, 700, 855, 889, 894, 1035, 1145, 1210
AgsI TTSAA 6 cut(s) 101, 266, 397, 1003, 1270, 1309
AjnI CCWGG 1 cut(s) 605
AjuI GAANNNNNNNTTGG 4 cut(s) 833, 865, 1243, 1275
AluBI AGCT 5 cut(s) 116, 167, 184, 269, 997
AluI AGCT 5 cut(s) 116, 167, 184, 269, 997
Alw21I GWGCWC 1 cut(s) 567
Alw26I GTCTC 3 cut(s) 240, 597, 1129
AlwI GGATC 5 cut(s) 494, 529, 606, 619, 940
Ama87I CYCGRG 2 cut(s) 875, 889
AoxI GGCC 2 cut(s) 1143, 1197
ApeKI GCWGC 6 cut(s) 137, 167, 170, 269, 1135, 1188
ApoI RAATTY 2 cut(s) 378, 1043
Asp700I GAANNNNTTC 1 cut(s) 105
AspLEI GCGC 1 cut(s) 837
AspS9I GGNCC 6 cut(s) 528, 621, 722, 879, 909, 1143
AsuC2I CCSGG 1 cut(s) 338
AsuNHI GCTAGC 1 cut(s) 116
AvaI CYCGRG 2 cut(s) 875, 889
AvaII GGWCC 5 cut(s) 528, 621, 722, 879, 909
BamHI GGATCC 1 cut(s) 611
BbsI GAAGAC 1 cut(s) 892
Bbv12I GWGCWC 1 cut(s) 567
BbvI GCAGC 6 cut(s) 149, 154, 157, 256, 1122, 1175
BccI CCATC 8 cut(s) 188, 511, 514, 577, 647, 779, 971, 1019
BciT130I CCWGG 1 cut(s) 607
BcnI CCSGG 1 cut(s) 338
BcoDI GTCTC 3 cut(s) 240, 597, 1129
BfaI CTAG 2 cut(s) 117, 1040
BfoI RGCGCY 1 cut(s) 838
Bme1390I CCNGG 2 cut(s) 338, 607
Bme18I GGWCC 5 cut(s) 528, 621, 722, 879, 909
BmeT110I CYCGRG 2 cut(s) 875, 889
BmgT120I GGNCC 6 cut(s) 528, 621, 722, 879, 909, 1143
BmiI GGNNCC 6 cut(s) 431, 584, 613, 860, 880, 881
BmrFI CCNGG 2 cut(s) 338, 607
BmsI GCATC 4 cut(s) 74, 792, 1164, 1212
BmtI GCTAGC 1 cut(s) 120
BpiI GAAGAC 1 cut(s) 892
BpmI CTGGAG 1 cut(s) 252
Bpu10I CCTNAGC 1 cut(s) 180
BpuMI CCSGG 1 cut(s) 338
BsaAI YACGTR 1 cut(s) 1318
BsaI GGTCTC 2 cut(s) 597, 1129
BsaJI CCNNGG 7 cut(s) 306, 336, 606, 874, 888, 973, 1139
BsaWI WCCGGW 2 cut(s) 426, 585
BsaXI ACNNNNNCTCC 4 cut(s) 287, 317, 587, 617
Bsc4I CCNNNNNNNGG 9 cut(s) 307, 606, 700, 855, 889, 894, 1035, 1145, 1210
Bse118I RCCGGY 4 cut(s) 283, 508, 779, 1145
Bse1I ACTGG 2 cut(s) 235, 853
Bse3DI GCAATG 1 cut(s) 1198
BseBI CCWGG 1 cut(s) 607
BseDI CCNNGG 7 cut(s) 306, 336, 606, 874, 888, 973, 1139
BseGI GGATG 4 cut(s) 89, 465, 963, 1011
BseLI CCNNNNNNNGG 9 cut(s) 307, 606, 700, 855, 889, 894, 1035, 1145, 1210
BseMI GCAATG 1 cut(s) 1198
BseNI ACTGG 2 cut(s) 235, 853
BseRI GAGGAG 8 cut(s) 249, 295, 668, 671, 680, 749, 784, 851
BseXI GCAGC 6 cut(s) 149, 154, 157, 256, 1122, 1175
BseYI CCCAGC 2 cut(s) 79, 1183
BsgI GTGCAG 1 cut(s) 77
Bsh1236I CGCG 3 cut(s) 975, 1141, 1154
BshFI GGCC 2 cut(s) 1145, 1199
BsiHKAI GWGCWC 1 cut(s) 567
BsiHKCI CYCGRG 2 cut(s) 875, 889
BsiSI CCGG 7 cut(s) 284, 338, 427, 509, 586, 780, 1146
BslFI GGGAC 3 cut(s) 698, 892, 971
BslI CCNNNNNNNGG 9 cut(s) 307, 606, 700, 855, 889, 894, 1035, 1145, 1210
BsmAI GTCTC 3 cut(s) 240, 597, 1129
BsmFI GGGAC 3 cut(s) 698, 892, 971
BsmI GAATGC 1 cut(s) 1288
BsnI GGCC 2 cut(s) 1145, 1199
Bso31I GGTCTC 2 cut(s) 597, 1129
BsoBI CYCGRG 2 cut(s) 875, 889
Bsp1286I GDGCHC 1 cut(s) 567
Bsp143I GATC 4 cut(s) 499, 534, 611, 945
BspANI GGCC 2 cut(s) 1145, 1199
BspFNI CGCG 3 cut(s) 975, 1141, 1154
BspHI TCATGA 2 cut(s) 750, 1230
BspLI GGNNCC 6 cut(s) 431, 584, 613, 860, 880, 881
BspOI GCTAGC 1 cut(s) 120
BspPI GGATC 5 cut(s) 494, 529, 606, 619, 940
BspQI GCTCTTC 2 cut(s) 348, 1004
BspTNI GGTCTC 2 cut(s) 597, 1129
BsrDI GCAATG 1 cut(s) 1198
BsrFI RCCGGY 4 cut(s) 283, 508, 779, 1145
BsrI ACTGG 2 cut(s) 235, 853
BssAI RCCGGY 4 cut(s) 283, 508, 779, 1145
BssECI CCNNGG 7 cut(s) 306, 336, 606, 874, 888, 973, 1139
BssMI GATC 4 cut(s) 499, 534, 611, 945
Bst2UI CCWGG 1 cut(s) 607
Bst4CI ACNGT 1 cut(s) 393
Bst6I CTCTTC 3 cut(s) 348, 635, 1004
BstBAI YACGTR 1 cut(s) 1318
BstC8I GCNNGC 7 cut(s) 118, 165, 781, 1068, 1143, 1147, 1201
BstDEI CTNAG 2 cut(s) 153, 180
BstDSI CCRYGG 2 cut(s) 973, 1139
BstF5I GGATG 4 cut(s) 89, 465, 963, 1011
BstFNI CGCG 3 cut(s) 975, 1141, 1154
BstH2I RGCGCY 1 cut(s) 838
BstHHI GCGC 1 cut(s) 837
BstKTI GATC 4 cut(s) 502, 537, 614, 948
BstMAI GTCTC 3 cut(s) 240, 597, 1129
BstMBI GATC 4 cut(s) 499, 534, 611, 945
BstMWI GCNNNNNNNGC 2 cut(s) 562, 1151
BstNI CCWGG 1 cut(s) 607
BstSCI CCNGG 2 cut(s) 336, 605
BstUI CGCG 3 cut(s) 975, 1141, 1154
BstV1I GCAGC 6 cut(s) 149, 154, 157, 256, 1122, 1175
BstV2I GAAGAC 1 cut(s) 892
BstX2I RGATCY 1 cut(s) 611
BstYI RGATCY 1 cut(s) 611
BsuRI GGCC 2 cut(s) 1145, 1199
BtgI CCRYGG 2 cut(s) 973, 1139
BtgZI GCGATG 1 cut(s) 625
BtsCI GGATG 4 cut(s) 89, 465, 963, 1011
BtsIMutI CAGTG 2 cut(s) 410, 860
Cac8I GCNNGC 7 cut(s) 118, 165, 781, 1068, 1143, 1147, 1201
CciI TCATGA 2 cut(s) 750, 1230
CfoI GCGC 1 cut(s) 837
Cfr10I RCCGGY 4 cut(s) 283, 508, 779, 1145
Cfr13I GGNCC 6 cut(s) 528, 621, 722, 879, 909, 1143
Cfr42I CCGCGG 2 cut(s) 976, 1142
CpoI CGGWCCG 1 cut(s) 528
Csp6I GTAC 1 cut(s) 401
CspI CGGWCCG 1 cut(s) 528
CviAII CATG 7 cut(s) 93, 121, 618, 751, 943, 1033, 1231
CviQI GTAC 1 cut(s) 401
DdeI CTNAG 2 cut(s) 153, 180
DpnI GATC 4 cut(s) 501, 536, 613, 947
DpnII GATC 4 cut(s) 499, 534, 611, 945
Eam1104I CTCTTC 3 cut(s) 348, 635, 1004
EarI CTCTTC 3 cut(s) 348, 635, 1004
EciI GGCGGA 3 cut(s) 683, 787, 959
Eco31I GGTCTC 2 cut(s) 597, 1129
Eco47I GGWCC 5 cut(s) 528, 621, 722, 879, 909
Eco88I CYCGRG 2 cut(s) 875, 889
EcoO109I RGGNCCY 1 cut(s) 879
EcoRI GAATTC 2 cut(s) 378, 1043
EcoRII CCWGG 1 cut(s) 605
EcoT22I ATGCAT 1 cut(s) 1227
FaeI CATG 7 cut(s) 96, 124, 621, 754, 946, 1036, 1234
FaqI GGGAC 3 cut(s) 698, 892, 971
FatI CATG 7 cut(s) 92, 120, 617, 750, 942, 1032, 1230
FauI CCCGC 6 cut(s) 497, 739, 890, 938, 1134, 1232
FauNDI CATATG 1 cut(s) 220
FblI GTMKAC 1 cut(s) 706
FokI GGATG 4 cut(s) 96, 452, 950, 998
FspBI CTAG 2 cut(s) 117, 1040
GlaI GCGC 1 cut(s) 836
GsaI CCCAGC 2 cut(s) 83, 1187
GsuI CTGGAG 1 cut(s) 252
HaeII RGCGCY 1 cut(s) 838
HaeIII GGCC 2 cut(s) 1145, 1199
HapII CCGG 7 cut(s) 284, 338, 427, 509, 586, 780, 1146
HhaI GCGC 1 cut(s) 837
Hin1II CATG 7 cut(s) 96, 124, 621, 754, 946, 1036, 1234
Hin6I GCGC 1 cut(s) 835
HinP1I GCGC 1 cut(s) 835
HincII GTYRAC 1 cut(s) 707
HindII GTYRAC 1 cut(s) 707
HinfI GANTC 7 cut(s) 215, 248, 258, 405, 541, 1251, 1291
HpaII CCGG 7 cut(s) 284, 338, 427, 509, 586, 780, 1146
Hpy166II GTNNAC 2 cut(s) 707, 1165
Hpy188I TCNGA 4 cut(s) 377, 562, 722, 1352
Hpy188III TCNNGA 7 cut(s) 442, 497, 538, 751, 877, 1231, 1306
Hpy8I GTNNAC 2 cut(s) 707, 1165
Hpy99I CGWCG 1 cut(s) 581
HpyCH4III ACNGT 1 cut(s) 393
HpyCH4IV ACGT 6 cut(s) 297, 515, 548, 1085, 1206, 1317
HpyCH4V TGCA 5 cut(s) 58, 173, 211, 1191, 1225
HpyF10VI GCNNNNNNNGC 2 cut(s) 562, 1151
HpyF3I CTNAG 2 cut(s) 153, 180
HpySE526I ACGT 6 cut(s) 297, 515, 548, 1085, 1206, 1317
Hsp92II CATG 7 cut(s) 96, 124, 621, 754, 946, 1036, 1234
HspAI GCGC 1 cut(s) 835
KflI GGGWCCC 1 cut(s) 879
KroI GCCGGC 2 cut(s) 779, 1145
KroNI GCCGGC 2 cut(s) 781, 1147
KspI CCGCGG 2 cut(s) 976, 1142
Kzo9I GATC 4 cut(s) 499, 534, 611, 945
LguI GCTCTTC 2 cut(s) 348, 1004
LmnI GCTCC 5 cut(s) 197, 429, 562, 842, 864
Lsp1109I GCAGC 6 cut(s) 149, 154, 157, 256, 1122, 1175
LweI GCATC 4 cut(s) 74, 792, 1164, 1212
MaeI CTAG 2 cut(s) 117, 1040
MaeII ACGT 6 cut(s) 297, 515, 548, 1085, 1206, 1317
MaeIII GTNAC 1 cut(s) 454
MalI GATC 4 cut(s) 501, 536, 613, 947
MboI GATC 4 cut(s) 499, 534, 611, 945
MflI RGATCY 1 cut(s) 611
MhlI GDGCHC 1 cut(s) 567
MluCI AATT 4 cut(s) 38, 378, 1043, 1270
MlyI GAGTC 4 cut(s) 242, 267, 399, 535
Mph1103I ATGCAT 1 cut(s) 1227
MroNI GCCGGC 2 cut(s) 779, 1145
MroXI GAANNNNTTC 1 cut(s) 105
MseI TTAA 1 cut(s) 242
MspA1I CMGCKG 2 cut(s) 975, 1141
MspI CCGG 7 cut(s) 284, 338, 427, 509, 586, 780, 1146
MspR9I CCNGG 2 cut(s) 338, 607
Mva1269I GAATGC 1 cut(s) 1288
MvaI CCWGG 1 cut(s) 607
MvnI CGCG 3 cut(s) 975, 1141, 1154
MwoI GCNNNNNNNGC 2 cut(s) 562, 1151
NaeI GCCGGC 2 cut(s) 781, 1147
NciI CCSGG 1 cut(s) 338
NdeI CATATG 1 cut(s) 220
NdeII GATC 4 cut(s) 499, 534, 611, 945
NgoMIV GCCGGC 2 cut(s) 779, 1145
NheI GCTAGC 1 cut(s) 116
NlaIII CATG 7 cut(s) 96, 124, 621, 754, 946, 1036, 1234
NlaIV GGNNCC 6 cut(s) 431, 584, 613, 860, 880, 881
NmeAIII GCCGAG 1 cut(s) 287
NmuCI GTSAC 1 cut(s) 454
NsiI ATGCAT 1 cut(s) 1227
PagI TCATGA 2 cut(s) 750, 1230
PciSI GCTCTTC 2 cut(s) 348, 1004
PctI GAATGC 1 cut(s) 1288
PdiI GCCGGC 2 cut(s) 781, 1147
PdmI GAANNNNTTC 1 cut(s) 105
PfeI GAWTC 3 cut(s) 215, 1251, 1291
PflMI CCANNNNNTGG 1 cut(s) 606
PleI GAGTC 4 cut(s) 242, 266, 399, 535
PpsI GAGTC 4 cut(s) 242, 266, 399, 535
Ppu21I YACGTR 1 cut(s) 1318
PpuMI RGGWCCY 1 cut(s) 879
Psp1406I AACGTT 1 cut(s) 515
Psp5II RGGWCCY 1 cut(s) 879
Psp6I CCWGG 1 cut(s) 605
PspFI CCCAGC 2 cut(s) 79, 1183
PspGI CCWGG 1 cut(s) 605
PspN4I GGNNCC 6 cut(s) 431, 584, 613, 860, 880, 881
PspPI GGNCC 6 cut(s) 528, 621, 722, 879, 909, 1143
PspPPI RGGWCCY 1 cut(s) 879
PsuI RGATCY 1 cut(s) 611
RsaI GTAC 1 cut(s) 402
RsaNI GTAC 1 cut(s) 401
Rsr2I CGGWCCG 1 cut(s) 528
RsrII CGGWCCG 1 cut(s) 528
SacII CCGCGG 2 cut(s) 976, 1142
SalI GTCGAC 1 cut(s) 705
SapI GCTCTTC 2 cut(s) 348, 1004
SaqAI TTAA 1 cut(s) 242
Sau3AI GATC 4 cut(s) 499, 534, 611, 945
Sau96I GGNCC 6 cut(s) 528, 621, 722, 879, 909, 1143
SchI GAGTC 4 cut(s) 242, 267, 399, 535
ScrFI CCNGG 2 cut(s) 338, 607
SduI GDGCHC 1 cut(s) 567
SfaNI GCATC 4 cut(s) 74, 792, 1164, 1212
Sfr303I CCGCGG 2 cut(s) 976, 1142
SgrBI CCGCGG 2 cut(s) 976, 1142
SinI GGWCC 5 cut(s) 528, 621, 722, 879, 909
Sse9I AATT 4 cut(s) 38, 378, 1043, 1270
SspMI CTAG 2 cut(s) 117, 1040
StyD4I CCNGG 2 cut(s) 336, 605
TaaI ACNGT 1 cut(s) 393
TaiI ACGT 6 cut(s) 300, 518, 551, 1088, 1209, 1320
TaqI TCGA 3 cut(s) 28, 706, 1079
TaqII GACCGA 1 cut(s) 516
TasI AATT 4 cut(s) 38, 378, 1043, 1270
TauI GCSGC 6 cut(s) 699, 803, 835, 975, 978, 1141
TfiI GAWTC 3 cut(s) 215, 1251, 1291
Tru1I TTAA 1 cut(s) 242
Tru9I TTAA 1 cut(s) 242
TscAI CASTG 2 cut(s) 417, 860
TseFI GTSAC 1 cut(s) 454
TseI GCWGC 6 cut(s) 137, 167, 170, 269, 1135, 1188
Tsp45I GTSAC 1 cut(s) 454
TspDTI ATGAA 5 cut(s) 739, 1012, 1021, 1219, 1247
TspGWI ACGGA 2 cut(s) 520, 652
TspRI CASTG 2 cut(s) 417, 860
Van91I CCANNNNNTGG 1 cut(s) 606
VpaK11BI GGWCC 5 cut(s) 528, 621, 722, 879, 909
XapI RAATTY 2 cut(s) 378, 1043
XmiI GTMKAC 1 cut(s) 706
XmnI GAANNNNTTC 1 cut(s) 105
XspI CTAG 2 cut(s) 117, 1040
Zsp2I ATGCAT 1 cut(s) 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.