Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015831

Physical Location & Seq

Genomic Coordinates Forward (+)

18539511 .. 18542122

Gene Structure 2612 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G39980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGCTCTTTCCAACGCCTCCTCTCTCTCCACCAGATCTATCTACGGCGGTGATCTTTCTCACCGTCCAAGCAACCGTCAATCATCCTTCACATTTCATCCCGCCGTCAACACCAAGCCTAAATCCGTTAACCTCGTCACGGCTGTACACGCGGCTGAGCCAGCTAGAAACGCTGTTTCAGTCAAAGAATCCGTTGCGTCTTCTTCGTCTGGTGCATTGAAATGGACTCCAGAGAGCTGGAAACTGAAGAAGGCTCTGCAACTTCCTGATTATCCTAACGCCAATGAGCTTGAGTCTGTGCTTAAAACGATAGAGGCTTTTCCTCCGATTGTGTTCGCCGGAGAAGCTAGGAATCTTGAAGAGAGATTGGCTGATGCTGCTGTTGGTAAAGCTTTTCTTCTCCAAGGAGGTGATTGTGCTGAGAGTTTCAAGGAGTTCAATGCTACTAATATCAGAGACACCTTCAGGGTTCTGCTTCAGATGAGTATTGTTCTTACATTCGGTGGCCAGGTTCCGGTCATTAAGGTTGGGAGGATGGCTGGTCAATTTGCAAAGCCTAGATCTGATGCATTTGAGGAGAAGGATGGAGTGAAATTACCAAGCTACAAGGGAGATAACATCAATGGTGATACTTTTGATGAGAAATCCAGGATTCCTGATCCTAATAGGATGATTCGAGCTTACACTCAATCTGCAGCTACTTTGAATCTTCTTAGAGCCTTTGCCACTGGAGGTTACGCTGCTATTCAAAGAGTTACTCAATGGAACCTTGATTTTGTTGAACAAAGTGAGCAAGCTGACAGGTACCAGGAATTAGCTAATAGGGTTGATGAGGCCTTGGGGTTCATGTCTGCATGTGGACTTGGCACGGATCATCCACTTATGACTACAACTGATTTCTACACATCCCATGAGTGTTTGCTTCTGCCTTATGAACAGTCCCTTACAAGGTTGGATTCAACTTCTGGTCTCTACTATGATTGTTCTGCACACATGGTCTGGTGCGGAGAGCGTACCAGACAATTGGATGGCGCTCATGTCGAGTTTCTCAGGGGGATTGCTAATCCTCTGGGCATTAAGGTGAGCAACAAAATGGATCCCTTTGAGCTGGTTAAGCTAGTAGAAATCCTGAATCCTAATAACAAGCCTGGAAGAATCACTGTAATTGTGAGAATGGGTGCCGAGAACATGAGAGTTAAGCTTCCCCACCTGATCAGAGCAGTCCGCAGATCAGGCCAGATTGTGACATGGGTCTGCGATCCAATGCATGGAAACACCATCAAAGCACCTTGCGGTCTTAAAACACGTGCCTTTGACTCAATACTGGCTGAAGTCCGAGCATTCCTTGATGTGCACGAGCAAGAAGGAAGCCACGCGGGCGGTATCCATCTCGAGATGACAGGTCAGAACGTGACAGAATGCATTGGAGGGTCCCGCACTGTGACCTACGATGACCTCAGTTCTCGCTACCACACACACTGTGACCCAAGGCTGAACGCGTCACAGTCTCTTGAACTTGCCTTCATTGTTGCAGAACGGCTCAGGAAGAGAAGAACGGGTAGCCAGCGTGTGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009423 GO:0009507 GO:0009536 GO:0009611 GO:0009987 GO:0016053 GO:0016740 GO:0016765 GO:0019438 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046417 GO:0050896 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 ko02024 map00400 map01100 map01110 map01130 map01230 map02024

Pfam Domains

Protein Families

DAHP_synth_2

Protein Analysis

525

Amino Acids

57.98

Weight (kDa)

8.28

Isoelectric Point (pI)

43.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAHP_synth_2	PF01474	75 - 511	2.2e-206	Class-II DAHP synthetase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015831)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39980
fragaria_vesca	FvH4_1g20450
malus_domestica	MD00G1037100.v1.1 MD01G1033900.v1.1
prunus_persica	Prupe.6G191200_v2.0.a1
pyrus_communis	pycom01g06110
rosa_chinensis	RchiOBHm_Chr2g0112721
rosa_laevigata	RLG00000018004
rosa_multiflora	Rmu_sc0001708.1_g000045
rosa_roxburghii	Rroxscaffold_2G00131220
rosa_rugosa	Rorug02G0182000
rosa_samantha	Rh2BG249400 Rh2CG240500 Rh2DG244000
rosa_wichuraiana	Rw2G018280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	804
AccB1I	GGYRCC	2 cut(s)	804, 1178
AccB7I	CCANNNNNTGG	1 cut(s)	1268
AccII	CGCG	3 cut(s)	152, 1376, 1499
AciI	CCGC	9 cut(s)	48, 102, 152, 1005, 1225, 1293, 1376, 1380, 1435
AclWI	GGATC	5 cut(s)	653, 879, 1091, 1104, 1253
AcoI	YGGCCR	1 cut(s)	505
AcuI	CTGAAG	4 cut(s)	266, 448, 461, 1350
AcvI	CACGTG	1 cut(s)	1307
AdeI	CACNNNGTG	1 cut(s)	1481
AfaI	GTAC	3 cut(s)	147, 806, 1015
AfiI	CCNNNNNNNGG	4 cut(s)	139, 514, 948, 1268
AflIII	ACRYGT	2 cut(s)	1304, 1497
AgsI	TTSAA	9 cut(s)	220, 359, 430, 439, 706, 749, 782, 960, 1514
AjnI	CCWGG	4 cut(s)	507, 647, 807, 1147
Alw21I	GWGCWC	1 cut(s)	1356
Alw26I	GTCTC	3 cut(s)	450, 974, 1512
Alw44I	GTGCAC	1 cut(s)	1352
AlwI	GGATC	5 cut(s)	653, 879, 1091, 1104, 1253
Ama87I	CYCGRG	1 cut(s)	1391
AoxI	GGCC	3 cut(s)	505, 834, 1234
ApaLI	GTGCAC	1 cut(s)	1352
ApeKI	GCWGC	3 cut(s)	377, 695, 740
Asp718I	GGTACC	1 cut(s)	804
AspLEI	GCGC	1 cut(s)	1034
AspS9I	GGNCC	1 cut(s)	1431
AsuHPI	GGTGA	5 cut(s)	53, 62, 422, 638, 1093
AvaI	CYCGRG	1 cut(s)	1391
AvaII	GGWCC	1 cut(s)	1431
BaeGI	GKGCMC	1 cut(s)	1356
BalI	TGGCCA	1 cut(s)	507
BamHI	GGATCC	1 cut(s)	1096
BanI	GGYRCC	2 cut(s)	804, 1178
BauI	CACGAG	1 cut(s)	1355
BbrPI	CACGTG	1 cut(s)	1307
BbsI	GAAGAC	1 cut(s)	192
Bbv12I	GWGCWC	1 cut(s)	1356
BbvI	GCAGC	3 cut(s)	364, 707, 727
BccI	CCATC	5 cut(s)	529, 578, 1022, 1286, 1395
BceAI	ACGGC	4 cut(s)	61, 89, 156, 1553
BciT130I	CCWGG	4 cut(s)	509, 649, 809, 1149
BciVI	GTATCC	1 cut(s)	1394
BclI	TGATCA	1 cut(s)	1212
BcoDI	GTCTC	3 cut(s)	450, 974, 1512
BfaI	CTAG	4 cut(s)	165, 348, 558, 1118
BfmI	CTRYAG	1 cut(s)	693
BfoI	RGCGCY	1 cut(s)	1035
BfuI	GTATCC	1 cut(s)	1394
BglI	GCCNNNNNGGC	1 cut(s)	1377
BglII	AGATCT	2 cut(s)	35, 560
BisI	GCNGC	4 cut(s)	153, 378, 696, 741
BlpI	GCTNAGC	1 cut(s)	156
BlsI	GCNGC	4 cut(s)	154, 379, 697, 742
Bme1390I	CCNGG	4 cut(s)	509, 649, 809, 1149
Bme18I	GGWCC	1 cut(s)	1431
BmeT110I	CYCGRG	1 cut(s)	1391
BmgT120I	GGNCC	1 cut(s)	1431
BmiI	GGNNCC	7 cut(s)	513, 767, 806, 1098, 1180, 1432, 1433
BmrFI	CCNGG	4 cut(s)	509, 649, 809, 1149
BmsI	GCATC	2 cut(s)	364, 556
BoxI	GACNNNNGTC	1 cut(s)	1250
BpiI	GAAGAC	1 cut(s)	192
BpmI	CTGGAG	2 cut(s)	213, 750
Bpu10I	CCTNAGC	1 cut(s)	1541
Bpu1102I	GCTNAGC	1 cut(s)	156
BpuEI	CTTGAG	1 cut(s)	311
BsaAI	YACGTR	1 cut(s)	1307
BsaI	GGTCTC	1 cut(s)	974
BsaJI	CCNNGG	3 cut(s)	403, 837, 1487
BsaWI	WCCGGW	1 cut(s)	514
Bsc4I	CCNNNNNNNGG	4 cut(s)	139, 514, 948, 1268
Bse1I	ACTGG	2 cut(s)	733, 1329
BseBI	CCWGG	4 cut(s)	509, 649, 809, 1149
BseDI	CCNNGG	3 cut(s)	403, 837, 1487
BseGI	GGATG	8 cut(s)	83, 97, 540, 589, 675, 874, 905, 1033
BseLI	CCNNNNNNNGG	4 cut(s)	139, 514, 948, 1268
BseMII	CTCAG	5 cut(s)	147, 411, 1063, 1471, 1555
BseNI	ACTGG	2 cut(s)	733, 1329
BseRI	GAGGAG	2 cut(s)	10, 590
BseSI	GKGCMC	1 cut(s)	1356
BseXI	GCAGC	3 cut(s)	364, 707, 727
BsgI	GTGCAG	1 cut(s)	972
Bsh1236I	CGCG	3 cut(s)	152, 1376, 1499
BshFI	GGCC	3 cut(s)	507, 836, 1236
BshNI	GGYRCC	2 cut(s)	804, 1178
BsiHKAI	GWGCWC	1 cut(s)	1356
BsiHKCI	CYCGRG	1 cut(s)	1391
BsiSI	CCGG	2 cut(s)	339, 515
BslFI	GGGAC	2 cut(s)	925, 1417
BslI	CCNNNNNNNGG	4 cut(s)	139, 514, 948, 1268
BsmAI	GTCTC	3 cut(s)	450, 974, 1512
BsmFI	GGGAC	2 cut(s)	925, 1417
BsmI	GAATGC	2 cut(s)	1340, 1424
BsnI	GGCC	3 cut(s)	507, 836, 1236
Bso31I	GGTCTC	1 cut(s)	974
BsoBI	CYCGRG	1 cut(s)	1391
Bsp1286I	GDGCHC	1 cut(s)	1356
Bsp1407I	TGTACA	1 cut(s)	145
Bsp143I	GATC	9 cut(s)	35, 52, 560, 658, 871, 1096, 1212, 1229, 1258
Bsp1720I	GCTNAGC	1 cut(s)	156
BspACI	CCGC	9 cut(s)	48, 102, 152, 1005, 1225, 1293, 1376, 1380, 1435
BspANI	GGCC	3 cut(s)	507, 836, 1236
BspCNI	CTCAG	5 cut(s)	148, 412, 1062, 1470, 1554
BspFNI	CGCG	3 cut(s)	152, 1376, 1499
BspLI	GGNNCC	7 cut(s)	513, 767, 806, 1098, 1180, 1432, 1433
BspMAI	CTGCAG	1 cut(s)	697
BspPI	GGATC	5 cut(s)	653, 879, 1091, 1104, 1253
BspT107I	GGYRCC	2 cut(s)	804, 1178
BspTNI	GGTCTC	1 cut(s)	974
BsrGI	TGTACA	1 cut(s)	145
BsrI	ACTGG	2 cut(s)	733, 1329
BssECI	CCNNGG	3 cut(s)	403, 837, 1487
BssMI	GATC	9 cut(s)	35, 52, 560, 658, 871, 1096, 1212, 1229, 1258
BssSI	CACGAG	1 cut(s)	1355
BssT1I	CCWWGG	3 cut(s)	403, 837, 1487
Bst2BI	CACGAG	1 cut(s)	1355
Bst2UI	CCWGG	4 cut(s)	509, 649, 809, 1149
Bst4CI	ACNGT	7 cut(s)	65, 77, 939, 1162, 1441, 1481, 1506
Bst6I	CTCTTC	2 cut(s)	354, 1541
BstAUI	TGTACA	1 cut(s)	145
BstBAI	YACGTR	1 cut(s)	1307
BstC8I	GCNNGC	4 cut(s)	162, 795, 1378, 1565
BstDEI	CTNAG	6 cut(s)	156, 420, 713, 1049, 1457, 1541
BstF5I	GGATG	8 cut(s)	83, 97, 540, 589, 675, 874, 905, 1033
BstFNI	CGCG	3 cut(s)	152, 1376, 1499
BstH2I	RGCGCY	1 cut(s)	1035
BstHHI	GCGC	1 cut(s)	1034
BstKTI	GATC	9 cut(s)	38, 55, 563, 661, 874, 1099, 1215, 1232, 1261
BstMAI	GTCTC	3 cut(s)	450, 974, 1512
BstMBI	GATC	9 cut(s)	35, 52, 560, 658, 871, 1096, 1212, 1229, 1258
BstMWI	GCNNNNNNNGC	8 cut(s)	149, 161, 170, 344, 377, 1114, 1233, 1377
BstNI	CCWGG	4 cut(s)	509, 649, 809, 1149
BstNSI	RCATGY	1 cut(s)	858
BstPAI	GACNNNNGTC	1 cut(s)	1250
BstSCI	CCNGG	4 cut(s)	507, 647, 807, 1147
BstSFI	CTRYAG	1 cut(s)	693
BstSLI	GKGCMC	1 cut(s)	1356
BstUI	CGCG	3 cut(s)	152, 1376, 1499
BstV1I	GCAGC	3 cut(s)	364, 707, 727
BstV2I	GAAGAC	1 cut(s)	192
BstX2I	RGATCY	3 cut(s)	35, 560, 1096
BstXI	CCANNNNNNTGG	2 cut(s)	237, 1024
BstYI	RGATCY	3 cut(s)	35, 560, 1096
BsuI	GTATCC	1 cut(s)	1394
BsuRI	GGCC	3 cut(s)	507, 836, 1236
BtsCI	GGATG	8 cut(s)	83, 97, 540, 589, 675, 874, 905, 1033
BtsIMutI	CAGTG	4 cut(s)	726, 1158, 1437, 1477
Cac8I	GCNNGC	4 cut(s)	162, 795, 1378, 1565
CfoI	GCGC	1 cut(s)	1034
Cfr13I	GGNCC	1 cut(s)	1431
CseI	GACGC	2 cut(s)	186, 1488
Csp6I	GTAC	3 cut(s)	146, 805, 1014
CviAII	CATG	8 cut(s)	847, 855, 911, 994, 1037, 1189, 1248, 1268
CviQI	GTAC	3 cut(s)	146, 805, 1014
DdeI	CTNAG	6 cut(s)	156, 420, 713, 1049, 1457, 1541
DpnI	GATC	9 cut(s)	37, 54, 562, 660, 873, 1098, 1214, 1231, 1260
DpnII	GATC	9 cut(s)	35, 52, 560, 658, 871, 1096, 1212, 1229, 1258
DraIII	CACNNNGTG	1 cut(s)	1481
EaeI	YGGCCR	1 cut(s)	505
Eam1104I	CTCTTC	2 cut(s)	354, 1541
EarI	CTCTTC	2 cut(s)	354, 1541
Eco130I	CCWWGG	3 cut(s)	403, 837, 1487
Eco147I	AGGCCT	1 cut(s)	836
Eco31I	GGTCTC	1 cut(s)	974
Eco47I	GGWCC	1 cut(s)	1431
Eco57I	CTGAAG	4 cut(s)	266, 448, 461, 1350
Eco72I	CACGTG	1 cut(s)	1307
Eco88I	CYCGRG	1 cut(s)	1391
EcoO109I	RGGNCCY	1 cut(s)	1431
EcoRII	CCWGG	4 cut(s)	507, 647, 807, 1147
EcoT14I	CCWWGG	3 cut(s)	403, 837, 1487
EcoT22I	ATGCAT	3 cut(s)	571, 1269, 1424
ErhI	CCWWGG	3 cut(s)	403, 837, 1487
FaeI	CATG	8 cut(s)	850, 858, 914, 997, 1040, 1192, 1251, 1271
FalI	AAGNNNNNCTT	2 cut(s)	381, 413
FaqI	GGGAC	2 cut(s)	925, 1417
FatI	CATG	8 cut(s)	846, 854, 910, 993, 1036, 1188, 1247, 1267
FauI	CCCGC	3 cut(s)	109, 1369, 1442
FbaI	TGATCA	1 cut(s)	1212
Fnu4HI	GCNGC	4 cut(s)	153, 378, 696, 741
FokI	GGATG	8 cut(s)	70, 84, 547, 596, 682, 861, 892, 1040
Fsp4HI	GCNGC	4 cut(s)	153, 378, 696, 741
FspBI	CTAG	4 cut(s)	165, 348, 558, 1118
GlaI	GCGC	1 cut(s)	1033
GluI	GCNGC	4 cut(s)	153, 378, 696, 741
GsuI	CTGGAG	2 cut(s)	213, 750
HaeII	RGCGCY	1 cut(s)	1035
HaeIII	GGCC	3 cut(s)	507, 836, 1236
HapII	CCGG	2 cut(s)	339, 515
HgaI	GACGC	2 cut(s)	186, 1488
HhaI	GCGC	1 cut(s)	1034
Hin1II	CATG	8 cut(s)	850, 858, 914, 997, 1040, 1192, 1251, 1271
Hin6I	GCGC	1 cut(s)	1032
HinP1I	GCGC	1 cut(s)	1032
HincII	GTYRAC	2 cut(s)	109, 130
HindII	GTYRAC	2 cut(s)	109, 130
HindIII	AAGCTT	2 cut(s)	390, 1199
HpaI	GTTAAC	1 cut(s)	130
HpaII	CCGG	2 cut(s)	339, 515
HphI	GGTGA	5 cut(s)	53, 62, 422, 638, 1093
Hpy166II	GTNNAC	5 cut(s)	109, 130, 148, 860, 1354
Hpy188I	TCNGA	7 cut(s)	327, 455, 480, 565, 1217, 1337, 1407
Hpy8I	GTNNAC	5 cut(s)	109, 130, 148, 860, 1354
HpyAV	CCTTC	6 cut(s)	97, 244, 472, 574, 1358, 1531
HpyCH4III	ACNGT	7 cut(s)	65, 77, 939, 1162, 1441, 1481, 1506
HpyCH4IV	ACGT	2 cut(s)	1306, 1410
HpyF10VI	GCNNNNNNNGC	8 cut(s)	149, 161, 170, 344, 377, 1114, 1233, 1377
HpyF3I	CTNAG	6 cut(s)	156, 420, 713, 1049, 1457, 1541
HpySE526I	ACGT	2 cut(s)	1306, 1410
Hsp92II	CATG	8 cut(s)	850, 858, 914, 997, 1040, 1192, 1251, 1271
HspAI	GCGC	1 cut(s)	1032
KflI	GGGWCCC	1 cut(s)	1431
KpnI	GGTACC	1 cut(s)	808
Ksp22I	TGATCA	1 cut(s)	1212
KspAI	GTTAAC	1 cut(s)	130
Kzo9I	GATC	9 cut(s)	35, 52, 560, 658, 871, 1096, 1212, 1229, 1258
Lsp1109I	GCAGC	3 cut(s)	364, 707, 727
LweI	GCATC	2 cut(s)	364, 556
MaeI	CTAG	4 cut(s)	165, 348, 558, 1118
MaeII	ACGT	2 cut(s)	1306, 1410
MaeIII	GTNAC	8 cut(s)	136, 734, 754, 1243, 1411, 1441, 1481, 1500
MalI	GATC	9 cut(s)	37, 54, 562, 660, 873, 1098, 1214, 1231, 1260
MboI	GATC	9 cut(s)	35, 52, 560, 658, 871, 1096, 1212, 1229, 1258
MboII	GAAGA	9 cut(s)	192, 195, 259, 371, 389, 701, 1164, 1558, 1563
MfeI	CAATTG	1 cut(s)	1022
MflI	RGATCY	3 cut(s)	35, 560, 1096
MhlI	GDGCHC	1 cut(s)	1356
MlsI	TGGCCA	1 cut(s)	507
MluCI	AATT	5 cut(s)	545, 593, 812, 1022, 1164
MluI	ACGCGT	1 cut(s)	1497
MluNI	TGGCCA	1 cut(s)	507
MlyI	GAGTC	3 cut(s)	220, 302, 1310
MmeI	TCCRAC	2 cut(s)	36, 933
Mox20I	TGGCCA	1 cut(s)	507
Mph1103I	ATGCAT	3 cut(s)	571, 1269, 1424
MscI	TGGCCA	1 cut(s)	507
MseI	TTAA	7 cut(s)	129, 303, 522, 1077, 1113, 1197, 1299
MslI	CAYNNNNRTG	2 cut(s)	220, 1079
Msp20I	TGGCCA	1 cut(s)	507
MspI	CCGG	2 cut(s)	339, 515
MspR9I	CCNGG	4 cut(s)	509, 649, 809, 1149
MunI	CAATTG	1 cut(s)	1022
Mva1269I	GAATGC	2 cut(s)	1340, 1424
MvaI	CCWGG	4 cut(s)	509, 649, 809, 1149
MvnI	CGCG	3 cut(s)	152, 1376, 1499
MwoI	GCNNNNNNNGC	8 cut(s)	149, 161, 170, 344, 377, 1114, 1233, 1377
NdeII	GATC	9 cut(s)	35, 52, 560, 658, 871, 1096, 1212, 1229, 1258
NlaIII	CATG	8 cut(s)	850, 858, 914, 997, 1040, 1192, 1251, 1271
NlaIV	GGNNCC	7 cut(s)	513, 767, 806, 1098, 1180, 1432, 1433
NmeAIII	GCCGAG	1 cut(s)	1207
NmuCI	GTSAC	6 cut(s)	136, 1243, 1411, 1441, 1481, 1500
NsiI	ATGCAT	3 cut(s)	571, 1269, 1424
NspI	RCATGY	1 cut(s)	858
PaeR7I	CTCGAG	1 cut(s)	1391
PceI	AGGCCT	1 cut(s)	836
PctI	GAATGC	2 cut(s)	1340, 1424
PfeI	GAWTC	8 cut(s)	188, 352, 652, 673, 706, 956, 1132, 1155
PflMI	CCANNNNNTGG	1 cut(s)	1268
PfoI	TCCNGGA	1 cut(s)	647
PkrI	GCNGC	4 cut(s)	154, 379, 697, 742
PleI	GAGTC	3 cut(s)	220, 301, 1310
PmaCI	CACGTG	1 cut(s)	1307
PmlI	CACGTG	1 cut(s)	1307
PpsI	GAGTC	3 cut(s)	220, 301, 1310
Ppu21I	YACGTR	1 cut(s)	1307
PpuMI	RGGWCCY	1 cut(s)	1431
PshAI	GACNNNNGTC	1 cut(s)	1250
Psp5II	RGGWCCY	1 cut(s)	1431
Psp6I	CCWGG	4 cut(s)	507, 647, 807, 1147
PspCI	CACGTG	1 cut(s)	1307
PspGI	CCWGG	4 cut(s)	507, 647, 807, 1147
PspN4I	GGNNCC	7 cut(s)	513, 767, 806, 1098, 1180, 1432, 1433
PspPI	GGNCC	1 cut(s)	1431
PspPPI	RGGWCCY	1 cut(s)	1431
PstI	CTGCAG	1 cut(s)	697
PsuI	RGATCY	3 cut(s)	35, 560, 1096
RsaI	GTAC	3 cut(s)	147, 806, 1015
RsaNI	GTAC	3 cut(s)	146, 805, 1014
RseI	CAYNNNNRTG	2 cut(s)	220, 1079
SaqAI	TTAA	7 cut(s)	129, 303, 522, 1077, 1113, 1197, 1299
SatI	GCNGC	4 cut(s)	153, 378, 696, 741
Sau3AI	GATC	9 cut(s)	35, 52, 560, 658, 871, 1096, 1212, 1229, 1258
Sau96I	GGNCC	1 cut(s)	1431
SchI	GAGTC	3 cut(s)	220, 302, 1310
ScrFI	CCNGG	4 cut(s)	509, 649, 809, 1149
SduI	GDGCHC	1 cut(s)	1356
SfaNI	GCATC	2 cut(s)	364, 556
SfcI	CTRYAG	1 cut(s)	693
Sfr274I	CTCGAG	1 cut(s)	1391
SinI	GGWCC	1 cut(s)	1431
SlaI	CTCGAG	1 cut(s)	1391
SmiMI	CAYNNNNRTG	2 cut(s)	220, 1079
SmlI	CTYRAG	2 cut(s)	290, 1391
SmoI	CTYRAG	2 cut(s)	290, 1391
Sse9I	AATT	5 cut(s)	545, 593, 812, 1022, 1164
SseBI	AGGCCT	1 cut(s)	836
SsiI	CCGC	9 cut(s)	48, 102, 152, 1005, 1225, 1293, 1376, 1380, 1435
SspMI	CTAG	4 cut(s)	165, 348, 558, 1118
StuI	AGGCCT	1 cut(s)	836
StyD4I	CCNGG	4 cut(s)	507, 647, 807, 1147
StyI	CCWWGG	3 cut(s)	403, 837, 1487
TaaI	ACNGT	7 cut(s)	65, 77, 939, 1162, 1441, 1481, 1506
TaiI	ACGT	2 cut(s)	1309, 1413
TaqI	TCGA	3 cut(s)	676, 1041, 1392
TasI	AATT	5 cut(s)	545, 593, 812, 1022, 1164
TatI	WGTACW	1 cut(s)	145
TauI	GCSGC	1 cut(s)	155
TfiI	GAWTC	8 cut(s)	188, 352, 652, 673, 706, 956, 1132, 1155
Tru1I	TTAA	7 cut(s)	129, 303, 522, 1077, 1113, 1197, 1299
Tru9I	TTAA	7 cut(s)	129, 303, 522, 1077, 1113, 1197, 1299
TscAI	CASTG	4 cut(s)	733, 1165, 1444, 1484
TseFI	GTSAC	6 cut(s)	136, 1243, 1411, 1441, 1481, 1500
TseI	GCWGC	3 cut(s)	377, 695, 740
Tsp45I	GTSAC	6 cut(s)	136, 1243, 1411, 1441, 1481, 1500
TspDTI	ATGAA	4 cut(s)	86, 835, 948, 1513
TspGWI	ACGGA	3 cut(s)	115, 181, 884
TspRI	CASTG	4 cut(s)	733, 1165, 1444, 1484
Van91I	CCANNNNNTGG	1 cut(s)	1268
VneI	GTGCAC	1 cut(s)	1352
VpaK11BI	GGWCC	1 cut(s)	1431
XceI	RCATGY	1 cut(s)	858
XhoI	CTCGAG	1 cut(s)	1391
XspI	CTAG	4 cut(s)	165, 348, 558, 1118
Zsp2I	ATGCAT	3 cut(s)	571, 1269, 1424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.