Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0015831

Physical Location & Seq

Genomic Coordinates Reverse (-)

12656477 .. 12660209

Gene Structure 3733 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g20450.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGCGCTCACAAACCCAACAACCCTCTCCTCCAAATCACTCTGCAACAACCCTCTTTCCGTCCCTACCACTCAATCTCACCAACCCACTTTTCTCGCCACCAAGAAACGCCTCGTCCACCCCATCTCCGCCGCGGCCGCGGCCGACGGCGGCAAGTCCCCCGTCGTCGCCGAGAAGCCCCCGAAGGCGGCGGTGGCGGCGGCACCGGTGGCGGCGCCGAAGCCCAACTCCGGGAAATGGAGCATTGAGAGCTGGAAGACCAAGAAGGCTCTGCAGCTGCCTGAGTACCCAGATCAGAATGAGCTCAACACCGTGTTGGGTACCATTGAGTCGTTCCCGCCGATCGTGTTCGCCGGAGAGGCCAGGCACTTGGAGGAGAAGATCGCCGAGGCTGCAATGGGTAATGCTTTTCTTCTTCAGGGTGGTGACTGCGCTGAGAGCTTCAAGGAGTTCAGTGCTAATAATATTAGGGACACTTTCAGAGTGATGCTCCAGATGGGAGTTGTACTTATGTTCGGAGGACAAATGAACGTTGTCAAGGTGGGAAGAATGGCGGGTCAGTTTGCCAAGCCGAGATCAGCTGCAGTTGAGGAGAAGAATGGGATTACGCTGCCAGTTTACAAGGGAGACAATATTAATGGCGAGGCCTTTGATGAGAAGTCTAGAATTCCAGACCCTCAGAGGTTGATCAGGGCTTACTGCCAATCTGCTGCAACTTTGAACCTTCTGAGGTCGTTTGCCACCGGAGGGTATGCCGCTATGCAGAGGGTTACTCAATGGAATCTCGACTTTGCTGAGCACAGTGAGCAGGGAGATAGGTACCAGGAATTGGCTCACCGGGTTGATGAAGCCTTGGGATTCATGTCAGCTGCTGGACTTACAGTTGATCATCCTATCATGAGGACAACTGAGTTCTGGACATCCCATGAGTGCTTGCATTTGCCATATGAGCAAGCCCTCACAAGGGAGGATTCTACTTCTGGACTCTTCTATGATTGCTCAGCTCATATGCTCTGGTGTGGGGAGCGTACCAGGCAACTGGATGGTGCCCATGTTGAGTTCCTAAGGGGAATCTCCAACCCTATTGGAGTCAAGGTGAGCAACACAATGGATCCAAAGGACCTTGTTAACCTCATTGAAATCCTAAACCCCACCAACAAGCCAGGAAGGATCACAATCATTTGCAGAATGGGTGCTGAGAACATGAGAGTCAAGCTTCCGCACTTGATTAGGGCTGTCCGCCAAGCAGGGCAAATTGTGACCTGGGTCTGCGACCCAATGCATGGAAACACTATTAAGGCACCCTGTGGACTCAAAACACGTCCATTTGATGCAATTCTAGCTGAGGTACGAGCATTCTTCGATGTTCATGAGCAAGAAGGGAGCCATCCTGGAGGAATTCATCTCGAGATGACTGGCCAGAATGTTACTGAGTGCATTGGAGGATCCCGAACAGTGACTTTCGATGATCTGAGCTCACGTTACCACACACACTGCGACCCAAGGCTGAATGCTTCTCAGGCTCTCGAGCTCGCCTTTATCATCGCTGAACGACTAAGGAAGAGAAGGATCGGAACACAACGTCTACTCTCTTTAAGCCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009423 GO:0009507 GO:0009536 GO:0009611 GO:0009987 GO:0016053 GO:0016740 GO:0016765 GO:0019438 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046417 GO:0050896 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 ko02024 map00400 map01100 map01110 map01130 map01230 map02024

Pfam Domains

Protein Families

DAHP_synth_2

Protein Analysis

535

Amino Acids

58.73

Weight (kDa)

7.98

Isoelectric Point (pI)

38.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAHP_synth_2	PF01474	80 - 516	7.1e-204	Class-II DAHP synthetase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015831)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39980
fragaria_vesca	FvH4_1g20450
malus_domestica	MD00G1037100.v1.1 MD01G1033900.v1.1
prunus_persica	Prupe.6G191200_v2.0.a1
pyrus_communis	pycom01g06110
rosa_chinensis	RchiOBHm_Chr2g0112721
rosa_laevigata	RLG00000018004
rosa_multiflora	Rmu_sc0001708.1_g000045
rosa_roxburghii	Rroxscaffold_2G00131220
rosa_rugosa	Rorug02G0182000
rosa_samantha	Rh2BG249400 Rh2CG240500 Rh2DG244000
rosa_wichuraiana	Rw2G018280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	320, 819
AccB1I	GGYRCC	6 cut(s)	202, 214, 320, 819, 1046, 1300
AccB7I	CCANNNNNTGG	2 cut(s)	829, 1283
AccI	GTMKAC	1 cut(s)	1585
AccII	CGCG	2 cut(s)	134, 140
AclI	AACGTT	1 cut(s)	531
AclWI	GGATC	6 cut(s)	1106, 1119, 1178, 1440, 1453, 1577
AcoI	YGGCCR	3 cut(s)	135, 141, 1417
AcsI	RAATTY	2 cut(s)	666, 1398
AcuI	CTGAAG	1 cut(s)	401
AcyI	GRCGYC	1 cut(s)	215
AdeI	CACNNNGTG	1 cut(s)	1307
AfaI	GTAC	6 cut(s)	287, 322, 507, 821, 1030, 1350
AfiI	CCNNNNNNNGG	9 cut(s)	187, 230, 231, 237, 747, 829, 963, 964, 1283
AflIII	ACRYGT	1 cut(s)	1319
AgeI	ACCGGT	1 cut(s)	205
AgsI	TTSAA	3 cut(s)	445, 721, 1139
AjiI	CACGTC	1 cut(s)	1322
AjnI	CCWGG	6 cut(s)	362, 822, 1031, 1162, 1262, 1390
AjuI	GAANNNNNNNTTGG	2 cut(s)	75, 107
Alw21I	GWGCWC	4 cut(s)	306, 801, 1478, 1533
Alw26I	GTCTC	1 cut(s)	621
AlwI	GGATC	6 cut(s)	1106, 1119, 1178, 1440, 1453, 1577
AlwNI	CAGNNNCTG	1 cut(s)	872
Ama87I	CYCGRG	2 cut(s)	1406, 1526
AoxI	GGCC	5 cut(s)	135, 141, 360, 645, 1417
ApeKI	GCWGC	7 cut(s)	274, 277, 392, 581, 610, 710, 869
ApoI	RAATTY	2 cut(s)	666, 1398
AseI	ATTAAT	1 cut(s)	636
AsiGI	ACCGGT	1 cut(s)	205
Asp718I	GGTACC	2 cut(s)	320, 819
AspLEI	GCGC	3 cut(s)	7, 217, 434
AspS9I	GGNCC	1 cut(s)	1120
AsuC2I	CCSGG	2 cut(s)	232, 839
AsuHPI	GGTGA	4 cut(s)	71, 437, 827, 1108
AvaI	CYCGRG	2 cut(s)	1406, 1526
AvaII	GGWCC	1 cut(s)	1120
AxyI	CCTNAGG	1 cut(s)	1064
BaeGI	GKGCMC	1 cut(s)	1051
BalI	TGGCCA	1 cut(s)	1419
BamHI	GGATCC	2 cut(s)	1111, 1445
BanI	GGYRCC	6 cut(s)	202, 214, 320, 819, 1046, 1300
BanII	GRGCYC	3 cut(s)	306, 1478, 1533
BbsI	GAAGAC	1 cut(s)	263
Bbv12I	GWGCWC	4 cut(s)	306, 801, 1478, 1533
BbvCI	CCTCAGC	1 cut(s)	1344
BbvI	GCAGC	7 cut(s)	264, 286, 379, 568, 597, 697, 856
BccI	CCATC	4 cut(s)	131, 490, 1037, 1395
BceAI	ACGGC	1 cut(s)	163
BciT130I	CCWGG	6 cut(s)	364, 824, 1033, 1164, 1264, 1392
BclI	TGATCA	2 cut(s)	687, 886
BcnI	CCSGG	2 cut(s)	232, 839
BcoDI	GTCTC	1 cut(s)	621
BfaI	CTAG	2 cut(s)	663, 1340
BfmI	CTRYAG	2 cut(s)	272, 582
BfoI	RGCGCY	2 cut(s)	8, 218
BglI	GCCNNNNNGGC	1 cut(s)	359
BlpI	GCTNAGC	2 cut(s)	795, 1000
Bme1390I	CCNGG	8 cut(s)	232, 364, 824, 839, 1033, 1164, 1264, 1392
Bme18I	GGWCC	1 cut(s)	1120
BmeT110I	CYCGRG	2 cut(s)	1406, 1526
BmgBI	CACGTC	1 cut(s)	1322
BmgT120I	GGNCC	1 cut(s)	1120
BmiI	GGNNCC	9 cut(s)	204, 216, 322, 821, 1048, 1113, 1302, 1385, 1447
BmrFI	CCNGG	8 cut(s)	232, 364, 824, 839, 1033, 1164, 1264, 1392
BmsI	GCATC	2 cut(s)	477, 1321
BoxI	GACNNNNGTC	1 cut(s)	1265
BpiI	GAAGAC	1 cut(s)	263
BplI	GAGNNNNNCTC	4 cut(s)	474, 506, 757, 789
BpmI	CTGGAG	2 cut(s)	476, 1413
Bpu10I	CCTNAGC	1 cut(s)	1344
Bpu1102I	GCTNAGC	2 cut(s)	795, 1000
BpuMI	CCSGG	2 cut(s)	232, 839
BsaBI	GATNNNNATC	1 cut(s)	1175
BsaHI	GRCGYC	1 cut(s)	215
BsaJI	CCNNGG	6 cut(s)	132, 138, 387, 852, 1263, 1502
BsaWI	WCCGGW	2 cut(s)	205, 743
BsaXI	ACNNNNNCTCC	4 cut(s)	110, 140, 1080, 1110
Bsc4I	CCNNNNNNNGG	9 cut(s)	187, 230, 231, 237, 747, 829, 963, 964, 1283
Bse118I	RCCGGY	1 cut(s)	205
Bse1I	ACTGG	3 cut(s)	614, 1044, 1420
Bse21I	CCTNAGG	1 cut(s)	1064
Bse3DI	GCAATG	1 cut(s)	402
Bse8I	GATNNNNATC	1 cut(s)	1175
BseBI	CCWGG	6 cut(s)	364, 824, 1033, 1164, 1264, 1392
BseDI	CCNNGG	6 cut(s)	132, 138, 387, 852, 1263, 1502
BseGI	GGATG	4 cut(s)	889, 920, 1048, 1387
BseJI	GATNNNNATC	1 cut(s)	1175
BseLI	CCNNNNNNNGG	9 cut(s)	187, 230, 231, 237, 747, 829, 963, 964, 1283
BseMI	GCAATG	1 cut(s)	402
BseNI	ACTGG	3 cut(s)	614, 1044, 1420
BseRI	GAGGAG	3 cut(s)	19, 389, 605
BseSI	GKGCMC	1 cut(s)	1051
BseX3I	CGGCCG	2 cut(s)	135, 141
BseXI	GCAGC	7 cut(s)	264, 286, 379, 568, 597, 697, 856
Bsh1236I	CGCG	2 cut(s)	134, 140
Bsh1285I	CGRYCG	3 cut(s)	138, 144, 345
BshFI	GGCC	5 cut(s)	137, 143, 362, 647, 1419
BshNI	GGYRCC	6 cut(s)	202, 214, 320, 819, 1046, 1300
BshTI	ACCGGT	1 cut(s)	205
BsiEI	CGRYCG	3 cut(s)	138, 144, 345
BsiHKAI	GWGCWC	4 cut(s)	306, 801, 1478, 1533
BsiHKCI	CYCGRG	2 cut(s)	1406, 1526
BsiSI	CCGG	5 cut(s)	206, 231, 354, 744, 838
BslFI	GGGAC	3 cut(s)	47, 142, 485
BslI	CCNNNNNNNGG	9 cut(s)	187, 230, 231, 237, 747, 829, 963, 964, 1283
BsmAI	GTCTC	1 cut(s)	621
BsmFI	GGGAC	3 cut(s)	47, 142, 485
BsmI	GAATGC	2 cut(s)	1355, 1516
BsnI	GGCC	5 cut(s)	137, 143, 362, 647, 1419
BsoBI	CYCGRG	2 cut(s)	1406, 1526
Bsp1286I	GDGCHC	5 cut(s)	306, 801, 1051, 1478, 1533
Bsp1720I	GCTNAGC	2 cut(s)	795, 1000
BspANI	GGCC	5 cut(s)	137, 143, 362, 647, 1419
BspFNI	CGCG	2 cut(s)	134, 140
BspHI	TCATGA	2 cut(s)	897, 1369
BspLI	GGNNCC	9 cut(s)	204, 216, 322, 821, 1048, 1113, 1302, 1385, 1447
BspMAI	CTGCAG	2 cut(s)	276, 586
BspPI	GGATC	6 cut(s)	1106, 1119, 1178, 1440, 1453, 1577
BspT107I	GGYRCC	6 cut(s)	202, 214, 320, 819, 1046, 1300
BsrDI	GCAATG	1 cut(s)	402
BsrFI	RCCGGY	1 cut(s)	205
BsrI	ACTGG	3 cut(s)	614, 1044, 1420
BssAI	RCCGGY	1 cut(s)	205
BssECI	CCNNGG	6 cut(s)	132, 138, 387, 852, 1263, 1502
BssNI	GRCGYC	1 cut(s)	215
BssT1I	CCWWGG	2 cut(s)	852, 1502
Bst2UI	CCWGG	6 cut(s)	364, 824, 1033, 1164, 1264, 1392
Bst4CI	ACNGT	4 cut(s)	313, 803, 883, 1456
Bst6I	CTCTTC	2 cut(s)	992, 1556
BstACI	GRCGYC	1 cut(s)	215
BstC8I	GCNNGC	3 cut(s)	935, 954, 1533
BstDSI	CCRYGG	2 cut(s)	132, 138
BstF5I	GGATG	4 cut(s)	889, 920, 1048, 1387
BstFNI	CGCG	2 cut(s)	134, 140
BstH2I	RGCGCY	2 cut(s)	8, 218
BstHHI	GCGC	3 cut(s)	7, 217, 434
BstMAI	GTCTC	1 cut(s)	621
BstMCI	CGRYCG	3 cut(s)	138, 144, 345
BstNI	CCWGG	6 cut(s)	364, 824, 1033, 1164, 1264, 1392
BstPAI	GACNNNNGTC	1 cut(s)	1265
BstSCI	CCNGG	8 cut(s)	230, 362, 822, 837, 1031, 1162, 1262, 1390
BstSFI	CTRYAG	2 cut(s)	272, 582
BstSLI	GKGCMC	1 cut(s)	1051
BstUI	CGCG	2 cut(s)	134, 140
BstV1I	GCAGC	7 cut(s)	264, 286, 379, 568, 597, 697, 856
BstV2I	GAAGAC	1 cut(s)	263
BstX2I	RGATCY	2 cut(s)	1111, 1445
BstXI	CCANNNNNNTGG	2 cut(s)	370, 1039
BstYI	RGATCY	2 cut(s)	1111, 1445
BstZI	CGGCCG	2 cut(s)	135, 141
Bsu36I	CCTNAGG	1 cut(s)	1064
BsuRI	GGCC	5 cut(s)	137, 143, 362, 647, 1419
BtgI	CCRYGG	2 cut(s)	132, 138
BtgZI	GCGATG	1 cut(s)	1528
BtrI	CACGTC	1 cut(s)	1322
BtsCI	GGATG	4 cut(s)	889, 920, 1048, 1387
BtsI	GCAGTG	1 cut(s)	1492
BtsIMutI	CAGTG	4 cut(s)	460, 808, 1461, 1492
Cac8I	GCNNGC	3 cut(s)	935, 954, 1533
CaiI	CAGNNNCTG	1 cut(s)	872
CciI	TCATGA	2 cut(s)	897, 1369
CciNI	GCGGCCGC	1 cut(s)	135
CfoI	GCGC	3 cut(s)	7, 217, 434
Cfr10I	RCCGGY	1 cut(s)	205
Cfr13I	GGNCC	1 cut(s)	1120
Cfr42I	CCGCGG	2 cut(s)	135, 141
Csp6I	GTAC	6 cut(s)	286, 321, 506, 820, 1029, 1349
CspAI	ACCGGT	1 cut(s)	205
CviAII	CATG	7 cut(s)	862, 898, 926, 1052, 1204, 1283, 1370
CviQI	GTAC	6 cut(s)	286, 321, 506, 820, 1029, 1349
DinI	GGCGCC	1 cut(s)	216
DraIII	CACNNNGTG	1 cut(s)	1307
EaeI	YGGCCR	3 cut(s)	135, 141, 1417
EagI	CGGCCG	2 cut(s)	135, 141
Eam1104I	CTCTTC	2 cut(s)	992, 1556
EarI	CTCTTC	2 cut(s)	992, 1556
EciI	GGCGGA	2 cut(s)	118, 1229
Ecl136II	GAGCTC	3 cut(s)	304, 1476, 1531
EclXI	CGGCCG	2 cut(s)	135, 141
Eco130I	CCWWGG	2 cut(s)	852, 1502
Eco147I	AGGCCT	1 cut(s)	647
Eco24I	GRGCYC	3 cut(s)	306, 1478, 1533
Eco47I	GGWCC	1 cut(s)	1120
Eco52I	CGGCCG	2 cut(s)	135, 141
Eco53kI	GAGCTC	3 cut(s)	304, 1476, 1531
Eco57I	CTGAAG	1 cut(s)	401
Eco81I	CCTNAGG	1 cut(s)	1064
Eco88I	CYCGRG	2 cut(s)	1406, 1526
EcoICRI	GAGCTC	3 cut(s)	304, 1476, 1531
EcoO109I	RGGNCCY	1 cut(s)	1120
EcoRI	GAATTC	2 cut(s)	666, 1398
EcoRII	CCWGG	6 cut(s)	362, 822, 1031, 1162, 1262, 1390
EcoT14I	CCWWGG	2 cut(s)	852, 1502
EcoT22I	ATGCAT	1 cut(s)	1284
EcoT38I	GRGCYC	3 cut(s)	306, 1478, 1533
EgeI	GGCGCC	1 cut(s)	216
EheI	GGCGCC	1 cut(s)	216
ErhI	CCWWGG	2 cut(s)	852, 1502
FaeI	CATG	7 cut(s)	865, 901, 929, 1055, 1207, 1286, 1373
FaqI	GGGAC	3 cut(s)	47, 142, 485
FatI	CATG	7 cut(s)	861, 897, 925, 1051, 1203, 1282, 1369
FauI	CCCGC	2 cut(s)	345, 547
FauNDI	CATATG	2 cut(s)	946, 1008
FbaI	TGATCA	2 cut(s)	687, 886
FblI	GTMKAC	1 cut(s)	1585
FokI	GGATG	4 cut(s)	876, 907, 1055, 1374
FriOI	GRGCYC	3 cut(s)	306, 1478, 1533
FspBI	CTAG	2 cut(s)	663, 1340
GlaI	GCGC	3 cut(s)	6, 216, 433
GsuI	CTGGAG	2 cut(s)	476, 1413
HaeII	RGCGCY	2 cut(s)	8, 218
HaeIII	GGCC	5 cut(s)	137, 143, 362, 647, 1419
HapII	CCGG	5 cut(s)	206, 231, 354, 744, 838
HhaI	GCGC	3 cut(s)	7, 217, 434
Hin1I	GRCGYC	1 cut(s)	215
Hin1II	CATG	7 cut(s)	865, 901, 929, 1055, 1207, 1286, 1373
Hin6I	GCGC	3 cut(s)	5, 215, 432
HinP1I	GCGC	3 cut(s)	5, 215, 432
HincII	GTYRAC	1 cut(s)	1129
HindII	GTYRAC	1 cut(s)	1129
HindIII	AAGCTT	1 cut(s)	1214
HinfI	GANTC	9 cut(s)	329, 781, 858, 971, 984, 1071, 1089, 1209, 1311
HpaI	GTTAAC	1 cut(s)	1129
HpaII	CCGG	5 cut(s)	206, 231, 354, 744, 838
HphI	GGTGA	4 cut(s)	71, 437, 827, 1108
Hpy166II	GTNNAC	5 cut(s)	118, 619, 1129, 1310, 1586
Hpy188I	TCNGA	7 cut(s)	297, 482, 518, 681, 729, 1473, 1574
Hpy8I	GTNNAC	5 cut(s)	118, 619, 1129, 1310, 1586
Hpy99I	CGWCG	3 cut(s)	149, 167, 170
HpyAV	CCTTC	6 cut(s)	178, 259, 734, 1161, 1373, 1560
HpyCH4III	ACNGT	4 cut(s)	313, 803, 883, 1456
HpyCH4IV	ACGT	4 cut(s)	531, 1321, 1480, 1582
HpySE526I	ACGT	4 cut(s)	531, 1321, 1480, 1582
Hsp92I	GRCGYC	1 cut(s)	215
Hsp92II	CATG	7 cut(s)	865, 901, 929, 1055, 1207, 1286, 1373
HspAI	GCGC	3 cut(s)	5, 215, 432
KasI	GGCGCC	1 cut(s)	214
KpnI	GGTACC	2 cut(s)	324, 823
Ksp22I	TGATCA	2 cut(s)	687, 886
KspAI	GTTAAC	1 cut(s)	1129
KspI	CCGCGG	2 cut(s)	135, 141
LmnI	GCTCC	4 cut(s)	240, 495, 1024, 1383
Lsp1109I	GCAGC	7 cut(s)	264, 286, 379, 568, 597, 697, 856
LweI	GCATC	2 cut(s)	477, 1321
MaeI	CTAG	2 cut(s)	663, 1340
MaeII	ACGT	4 cut(s)	531, 1321, 1480, 1582
MaeIII	GTNAC	6 cut(s)	425, 769, 1258, 1426, 1456, 1481
MboII	GAAGA	9 cut(s)	268, 391, 404, 407, 558, 607, 979, 1351, 1573
MflI	RGATCY	2 cut(s)	1111, 1445
MhlI	GDGCHC	5 cut(s)	306, 801, 1051, 1478, 1533
MlsI	TGGCCA	1 cut(s)	1419
MluCI	AATT	5 cut(s)	666, 827, 1254, 1335, 1398
MluNI	TGGCCA	1 cut(s)	1419
Mly113I	GGCGCC	1 cut(s)	215
MlyI	GAGTC	5 cut(s)	338, 978, 1098, 1218, 1305
MmeI	TCCRAC	1 cut(s)	1101
Mox20I	TGGCCA	1 cut(s)	1419
Mph1103I	ATGCAT	1 cut(s)	1284
MscI	TGGCCA	1 cut(s)	1419
MseI	TTAA	4 cut(s)	636, 1128, 1296, 1595
Msp20I	TGGCCA	1 cut(s)	1419
MspA1I	CMGCKG	5 cut(s)	134, 140, 277, 581, 869
MspI	CCGG	5 cut(s)	206, 231, 354, 744, 838
MspR9I	CCNGG	8 cut(s)	232, 364, 824, 839, 1033, 1164, 1264, 1392
Mva1269I	GAATGC	2 cut(s)	1355, 1516
MvaI	CCWGG	6 cut(s)	364, 824, 1033, 1164, 1264, 1392
MvnI	CGCG	2 cut(s)	134, 140
NarI	GGCGCC	1 cut(s)	215
NciI	CCSGG	2 cut(s)	232, 839
NdeI	CATATG	2 cut(s)	946, 1008
NlaIII	CATG	7 cut(s)	865, 901, 929, 1055, 1207, 1286, 1373
NlaIV	GGNNCC	9 cut(s)	204, 216, 322, 821, 1048, 1113, 1302, 1385, 1447
NmeAIII	GCCGAG	3 cut(s)	196, 412, 597
NmuCI	GTSAC	3 cut(s)	425, 1258, 1456
NotI	GCGGCCGC	1 cut(s)	135
NsiI	ATGCAT	1 cut(s)	1284
PaeR7I	CTCGAG	2 cut(s)	1406, 1526
PagI	TCATGA	2 cut(s)	897, 1369
PceI	AGGCCT	1 cut(s)	647
PcsI	WCGNNNNNNNCGW	1 cut(s)	338
PctI	GAATGC	2 cut(s)	1355, 1516
PfeI	GAWTC	4 cut(s)	781, 858, 971, 1071
PflMI	CCANNNNNTGG	2 cut(s)	829, 1283
PfoI	TCCNGGA	2 cut(s)	230, 1390
PinAI	ACCGGT	1 cut(s)	205
Ple19I	CGATCG	1 cut(s)	345
PleI	GAGTC	5 cut(s)	337, 978, 1097, 1217, 1305
PluTI	GGCGCC	1 cut(s)	218
PpsI	GAGTC	5 cut(s)	337, 978, 1097, 1217, 1305
PpuMI	RGGWCCY	1 cut(s)	1120
PshAI	GACNNNNGTC	1 cut(s)	1265
PshBI	ATTAAT	1 cut(s)	636
Psp124BI	GAGCTC	3 cut(s)	306, 1478, 1533
Psp1406I	AACGTT	1 cut(s)	531
Psp5II	RGGWCCY	1 cut(s)	1120
Psp6I	CCWGG	6 cut(s)	362, 822, 1031, 1162, 1262, 1390
PspGI	CCWGG	6 cut(s)	362, 822, 1031, 1162, 1262, 1390
PspN4I	GGNNCC	9 cut(s)	204, 216, 322, 821, 1048, 1113, 1302, 1385, 1447
PspPI	GGNCC	1 cut(s)	1120
PspPPI	RGGWCCY	1 cut(s)	1120
PstI	CTGCAG	2 cut(s)	276, 586
PstNI	CAGNNNCTG	1 cut(s)	872
PsuI	RGATCY	2 cut(s)	1111, 1445
PvuI	CGATCG	1 cut(s)	345
PvuII	CAGCTG	3 cut(s)	277, 581, 869
RsaI	GTAC	6 cut(s)	287, 322, 507, 821, 1030, 1350
RsaNI	GTAC	6 cut(s)	286, 321, 506, 820, 1029, 1349
SacI	GAGCTC	3 cut(s)	306, 1478, 1533
SacII	CCGCGG	2 cut(s)	135, 141
SaqAI	TTAA	4 cut(s)	636, 1128, 1296, 1595
Sau96I	GGNCC	1 cut(s)	1120
SchI	GAGTC	5 cut(s)	338, 978, 1098, 1218, 1305
ScrFI	CCNGG	8 cut(s)	232, 364, 824, 839, 1033, 1164, 1264, 1392
SduI	GDGCHC	5 cut(s)	306, 801, 1051, 1478, 1533
SfaNI	GCATC	2 cut(s)	477, 1321
SfcI	CTRYAG	2 cut(s)	272, 582
SfoI	GGCGCC	1 cut(s)	216
Sfr274I	CTCGAG	2 cut(s)	1406, 1526
Sfr303I	CCGCGG	2 cut(s)	135, 141
SgrAI	CRCCGGYG	1 cut(s)	205
SgrBI	CCGCGG	2 cut(s)	135, 141
SinI	GGWCC	1 cut(s)	1120
SlaI	CTCGAG	2 cut(s)	1406, 1526
SmlI	CTYRAG	2 cut(s)	1406, 1526
SmoI	CTYRAG	2 cut(s)	1406, 1526
Sse9I	AATT	5 cut(s)	666, 827, 1254, 1335, 1398
SseBI	AGGCCT	1 cut(s)	647
SspDI	GGCGCC	1 cut(s)	214
SspI	AATATT	2 cut(s)	466, 634
SspMI	CTAG	2 cut(s)	663, 1340
SstI	GAGCTC	3 cut(s)	306, 1478, 1533
StuI	AGGCCT	1 cut(s)	647
StyD4I	CCNGG	8 cut(s)	230, 362, 822, 837, 1031, 1162, 1262, 1390
StyI	CCWWGG	2 cut(s)	852, 1502
TaaI	ACNGT	4 cut(s)	313, 803, 883, 1456
TaiI	ACGT	4 cut(s)	534, 1324, 1483, 1585
TaqI	TCGA	5 cut(s)	786, 1362, 1407, 1464, 1527
TasI	AATT	5 cut(s)	666, 827, 1254, 1335, 1398
TatI	WGTACW	1 cut(s)	505
TfiI	GAWTC	4 cut(s)	781, 858, 971, 1071
Tru1I	TTAA	4 cut(s)	636, 1128, 1296, 1595
Tru9I	TTAA	4 cut(s)	636, 1128, 1296, 1595
TscAI	CASTG	4 cut(s)	460, 808, 1461, 1499
TseFI	GTSAC	3 cut(s)	425, 1258, 1456
TseI	GCWGC	7 cut(s)	274, 277, 392, 581, 610, 710, 869
Tsp45I	GTSAC	3 cut(s)	425, 1258, 1456
TspDTI	ATGAA	5 cut(s)	542, 850, 861, 1358, 1391
TspGWI	ACGGA	1 cut(s)	49
TspRI	CASTG	4 cut(s)	460, 808, 1461, 1499
Van91I	CCANNNNNTGG	2 cut(s)	829, 1283
VpaK11BI	GGWCC	1 cut(s)	1120
VspI	ATTAAT	1 cut(s)	636
XapI	RAATTY	2 cut(s)	666, 1398
XbaI	TCTAGA	1 cut(s)	662
XhoI	CTCGAG	2 cut(s)	1406, 1526
XmiI	GTMKAC	1 cut(s)	1585
XspI	CTAG	2 cut(s)	663, 1340
Zsp2I	ATGCAT	1 cut(s)	1284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.