Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0015831

Physical Location & Seq

Genomic Coordinates Reverse (-)

6582906 .. 6586310

Gene Structure 3405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1037100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGGCTCTCACAAACCCAGCAACCTTGTCCTCCAAATCAATCTGCAACACTCACTCTCTCTCCCCTCCCACCCCTCAATCTCACCAACCCATTTTCTCCCCATTTCCTTCCAAGAAAAAGACCCTCCACCCCATCTCCGCCGCCGCCGCCGACTCCGGCAAGTCCCCCGTCGTCGCCGAGAAGCCTCCAAAGGCCGCTGCGGCGCCCGCGAAGCCGGTTTCCGGAAAATGGAGCTTGGACAGCTGGAAATCCAAGAAGGCCCTGCAGCTTCCGGAGTACCCGGATGTGAACGAGCTGGAGACGGTGCTCAAGACCATCGAGTCATTTCCTCCGATTGTGTTCGCCGGAGAGGCCAGGCACTTGGAGGAGAAGCTCGCCGAGGCGGCCCTGGGCAACGCTTTTCTCTTGCAGGGCGGCGACTGTGCTGAGAGCTTCAAGGAGTTCAGCGCCAACAACATTAGGGACACCTTCAGAATCATGCTTCAGATGGGTGTTGTTCTGATGTTTGGAGGACAAATGCCTGTTATCAAGGTGGGAAGAATGGCGGGTCAGTTCGCGAAGCCAAGATCAGCGGAGTTTGAAGAGAAGAATGGGGTGAAGTTGCCGGTTTACAAAGGGGATAACATCAATGGTGACGCTTTTGATGAGAAATCTAGAAATCCAGACCCCCAGAGGTTGATAAGAGCTTATTGCCAATCTGCGGCAACTCTGAACCTTCTTCGGGCCTTTGCCACCGGAGGGTATGCTGCTATGCAGAGGGTTACTCAATGGAATCTTGATTTTGCTCAGCACAGCGAGCAGGGAGATAGGTACCAGGAACTGGCTAGCCGGGTCGACGAGGCTTTAGGGTTCATGAATGCTGCTGGACTTACAGTTGATCATCCTATCATGACAACAACTGATTTCTGGACATCCCATGAATGTCTGCATCTGGCCTATGAGCAATCACTCACAAGATTGGATTCTACTTCCGGTCTGTACTATGATTGCTCCGCCCACATGCTTTGGGTTGGTGAGCGTACCCGGCAACTGGATGGTGCCCATGTAGAGTTCCTAAGAGGACTTGCCAATCCCATCGGCATCAAGGTGAGCAATAAGATGGACCCAAAAGATCTTGTTAACATCATCGAAATCCTGAACCCTAGTAACAAGCCAGGAAGGATCACAATCATTGCTAGAATGGGTGCTGAGAACATGAGAGTCAAGCTTCCTCATTTGATTAGGGCTGTCCGCCAAGCAGGGCAGATTGTGACCTGGGTCTCCGATCCAATGCATGGAAACACTATCCAGGCACCCTGTGGACTCAAAACACGTCCATTTGATTCAATCTTGGCTGAGGTACGAGCATTCTTTGATGTGCACGAACAAGAAGGGAGCCACCCAGGAGGAATTCATTTGGAGATGACTGGGCAGAATGTGACAGAGTGCATTGGAGGCTCGCGAACAGTGACTTTTGATGATCTGAGCTCACGTTACCACACCCACTGCGACCCGAGGCTCAATGCTTCTCAGGCTCTTGAGCTATCCTTCATCATTGCAGAACGACTTAGGAAGAGAAGGATGGGAACTCAACGTTTGCCCTCGTTAAACCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009423 GO:0009507 GO:0009536 GO:0009611 GO:0009987 GO:0016053 GO:0016740 GO:0016765 GO:0019438 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046417 GO:0050896 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 ko02024 map00400 map01100 map01110 map01130 map01230 map02024

Pfam Domains

Protein Families

DAHP_synth_2

Protein Analysis

532

Amino Acids

58.56

Weight (kDa)

8.32

Isoelectric Point (pI)

43.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAHP_synth_2	PF01474	77 - 513	8.3e-203	Class-II DAHP synthetase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015831)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39980
fragaria_vesca	FvH4_1g20450
malus_domestica	MD00G1037100.v1.1 MD01G1033900.v1.1
prunus_persica	Prupe.6G191200_v2.0.a1
pyrus_communis	pycom01g06110
rosa_chinensis	RchiOBHm_Chr2g0112721
rosa_laevigata	RLG00000018004
rosa_multiflora	Rmu_sc0001708.1_g000045
rosa_roxburghii	Rroxscaffold_2G00131220
rosa_rugosa	Rorug02G0182000
rosa_samantha	Rh2BG249400 Rh2CG240500 Rh2DG244000
rosa_wichuraiana	Rw2G018280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	319
Acc65I	GGTACC	1 cut(s)	810
AccB1I	GGYRCC	4 cut(s)	202, 810, 1037, 1291
AccB7I	CCANNNNNTGG	2 cut(s)	820, 1274
AccI	GTMKAC	1 cut(s)	834
AccII	CGCG	3 cut(s)	209, 557, 1441
AccIII	TCCGGA	2 cut(s)	221, 271
AclI	AACGTT	1 cut(s)	1573
AclWI	GGATC	2 cut(s)	1169, 1259
AcsI	RAATTY	1 cut(s)	1389
AcuI	CTGAAG	2 cut(s)	454, 467
AcyI	GRCGYC	1 cut(s)	203
AdeI	CACNNNGTG	1 cut(s)	1298
AfaI	GTAC	5 cut(s)	278, 812, 980, 1021, 1341
AfiI	CCNNNNNNNGG	8 cut(s)	221, 228, 700, 721, 738, 820, 1030, 1274
AflIII	ACRYGT	1 cut(s)	1310
AgsI	TTSAA	3 cut(s)	436, 581, 1326
AjiI	CACGTC	1 cut(s)	1313
AjnI	CCWGG	7 cut(s)	353, 387, 813, 1153, 1253, 1287, 1381
Alw21I	GWGCWC	3 cut(s)	309, 1362, 1469
Alw26I	GTCTC	2 cut(s)	293, 1264
Alw44I	GTGCAC	1 cut(s)	1358
AlwI	GGATC	2 cut(s)	1169, 1259
AlwNI	CAGNNNCTG	1 cut(s)	820
Ama87I	CYCGRG	1 cut(s)	1492
Aor13HI	TCCGGA	2 cut(s)	221, 271
AoxI	GGCC	6 cut(s)	192, 258, 351, 384, 723, 933
ApaLI	GTGCAC	1 cut(s)	1358
ApeKI	GCWGC	4 cut(s)	197, 265, 746, 860
ApoI	RAATTY	1 cut(s)	1389
Asp718I	GGTACC	1 cut(s)	810
AspLEI	GCGC	2 cut(s)	205, 449
AspS9I	GGNCC	4 cut(s)	259, 385, 723, 1102
AsuC2I	CCSGG	3 cut(s)	281, 830, 1024
AsuHPI	GGTGA	5 cut(s)	74, 607, 644, 1025, 1099
AsuNHI	GCTAGC	1 cut(s)	824
AvaI	CYCGRG	1 cut(s)	1492
AvaII	GGWCC	1 cut(s)	1102
BaeGI	GKGCMC	2 cut(s)	1042, 1362
BanI	GGYRCC	4 cut(s)	202, 810, 1037, 1291
BanII	GRGCYC	1 cut(s)	1469
Bbv12I	GWGCWC	3 cut(s)	309, 1362, 1469
BbvCI	CCTCAGC	1 cut(s)	1335
BbvI	GCAGC	4 cut(s)	184, 277, 733, 847
BccI	CCATC	7 cut(s)	140, 323, 481, 1028, 1082, 1093, 1555
BciT130I	CCWGG	7 cut(s)	355, 389, 815, 1155, 1255, 1289, 1383
BclI	TGATCA	1 cut(s)	877
BcnI	CCSGG	3 cut(s)	281, 830, 1024
BcoDI	GTCTC	2 cut(s)	293, 1264
BfaI	CTAG	4 cut(s)	654, 825, 1143, 1176
BfmI	CTRYAG	1 cut(s)	263
BfoI	RGCGCY	2 cut(s)	206, 450
BglI	GCCNNNNNGGC	3 cut(s)	200, 350, 383
BglII	AGATCT	1 cut(s)	1111
BlpI	GCTNAGC	1 cut(s)	786
Bme18I	GGWCC	1 cut(s)	1102
BmeT110I	CYCGRG	1 cut(s)	1492
BmgBI	CACGTC	1 cut(s)	1313
BmgT120I	GGNCC	4 cut(s)	259, 385, 723, 1102
BmiI	GGNNCC	6 cut(s)	204, 812, 1039, 1104, 1293, 1376
BmrI	ACTGGG	1 cut(s)	1416
BmsI	GCATC	2 cut(s)	937, 1089
BmtI	GCTAGC	1 cut(s)	828
BmuI	ACTGGG	1 cut(s)	1416
BoxI	GACNNNNGTC	1 cut(s)	1256
BplI	GAGNNNNNCTC	2 cut(s)	748, 780
BpmI	CTGGAG	1 cut(s)	317
Bpu10I	CCTNAGC	1 cut(s)	1335
Bpu1102I	GCTNAGC	1 cut(s)	786
BpuEI	CTTGAG	2 cut(s)	293, 1538
BpuMI	CCSGG	3 cut(s)	281, 830, 1024
BsaBI	GATNNNNATC	1 cut(s)	1166
BsaHI	GRCGYC	1 cut(s)	203
BsaI	GGTCTC	1 cut(s)	1264
BsaJI	CCNNGG	6 cut(s)	378, 387, 388, 1254, 1381, 1493
BsaWI	WCCGGW	4 cut(s)	221, 271, 734, 971
BsaXI	ACNNNNNCTCC	4 cut(s)	44, 74, 119, 149
Bsc4I	CCNNNNNNNGG	8 cut(s)	221, 228, 700, 721, 738, 820, 1030, 1274
Bse118I	RCCGGY	2 cut(s)	214, 604
Bse1I	ACTGG	3 cut(s)	825, 1035, 1411
Bse3DI	GCAATG	2 cut(s)	1170, 1533
Bse8I	GATNNNNATC	1 cut(s)	1166
BseAI	TCCGGA	2 cut(s)	221, 271
BseBI	CCWGG	7 cut(s)	355, 389, 815, 1155, 1255, 1289, 1383
BseDI	CCNNGG	6 cut(s)	378, 387, 388, 1254, 1381, 1493
BseGI	GGATG	5 cut(s)	289, 880, 911, 1039, 1566
BseJI	GATNNNNATC	1 cut(s)	1166
BseLI	CCNNNNNNNGG	8 cut(s)	221, 228, 700, 721, 738, 820, 1030, 1274
BseMI	GCAATG	2 cut(s)	1170, 1533
BseMII	CTCAG	6 cut(s)	417, 800, 1179, 1326, 1454, 1523
BseNI	ACTGG	3 cut(s)	825, 1035, 1411
BseRI	GAGGAG	1 cut(s)	380
BseSI	GKGCMC	2 cut(s)	1042, 1362
BseXI	GCAGC	4 cut(s)	184, 277, 733, 847
BseYI	CCCAGC	1 cut(s)	16
Bsh1236I	CGCG	3 cut(s)	209, 557, 1441
BshFI	GGCC	6 cut(s)	194, 260, 353, 386, 725, 935
BshNI	GGYRCC	4 cut(s)	202, 810, 1037, 1291
BsiHKAI	GWGCWC	3 cut(s)	309, 1362, 1469
BsiHKCI	CYCGRG	1 cut(s)	1492
BslFI	GGGAC	2 cut(s)	148, 476
BslI	CCNNNNNNNGG	8 cut(s)	221, 228, 700, 721, 738, 820, 1030, 1274
BsmAI	GTCTC	2 cut(s)	293, 1264
BsmBI	CGTCTC	1 cut(s)	293
BsmFI	GGGAC	2 cut(s)	148, 476
BsmI	GAATGC	2 cut(s)	862, 1346
BsnI	GGCC	6 cut(s)	194, 260, 353, 386, 725, 935
Bso31I	GGTCTC	1 cut(s)	1264
BsoBI	CYCGRG	1 cut(s)	1492
Bsp1286I	GDGCHC	4 cut(s)	309, 1042, 1362, 1469
Bsp13I	TCCGGA	2 cut(s)	221, 271
Bsp143I	GATC	6 cut(s)	566, 877, 1111, 1161, 1264, 1459
Bsp1720I	GCTNAGC	1 cut(s)	786
Bsp68I	TCGCGA	2 cut(s)	557, 1441
BspANI	GGCC	6 cut(s)	194, 260, 353, 386, 725, 935
BspCNI	CTCAG	6 cut(s)	418, 799, 1180, 1327, 1455, 1522
BspEI	TCCGGA	2 cut(s)	221, 271
BspFNI	CGCG	3 cut(s)	209, 557, 1441
BspHI	TCATGA	2 cut(s)	852, 888
BspLI	GGNNCC	6 cut(s)	204, 812, 1039, 1104, 1293, 1376
BspMAI	CTGCAG	1 cut(s)	267
BspOI	GCTAGC	1 cut(s)	828
BspPI	GGATC	2 cut(s)	1169, 1259
BspT107I	GGYRCC	4 cut(s)	202, 810, 1037, 1291
BspTNI	GGTCTC	1 cut(s)	1264
BsrDI	GCAATG	2 cut(s)	1170, 1533
BsrFI	RCCGGY	2 cut(s)	214, 604
BsrI	ACTGG	3 cut(s)	825, 1035, 1411
BssAI	RCCGGY	2 cut(s)	214, 604
BssECI	CCNNGG	6 cut(s)	378, 387, 388, 1254, 1381, 1493
BssMI	GATC	6 cut(s)	566, 877, 1111, 1161, 1264, 1459
BssNI	GRCGYC	1 cut(s)	203
Bst2UI	CCWGG	7 cut(s)	355, 389, 815, 1155, 1255, 1289, 1383
Bst4CI	ACNGT	4 cut(s)	304, 422, 874, 1447
Bst6I	CTCTTC	2 cut(s)	576, 1547
BstACI	GRCGYC	1 cut(s)	203
BstC8I	GCNNGC	5 cut(s)	207, 375, 797, 826, 1439
BstDEI	CTNAG	8 cut(s)	426, 786, 1055, 1188, 1335, 1463, 1509, 1547
BstF5I	GGATG	5 cut(s)	289, 880, 911, 1039, 1566
BstFNI	CGCG	3 cut(s)	209, 557, 1441
BstH2I	RGCGCY	2 cut(s)	206, 450
BstHHI	GCGC	2 cut(s)	205, 449
BstKTI	GATC	6 cut(s)	569, 880, 1114, 1164, 1267, 1462
BstMAI	GTCTC	2 cut(s)	293, 1264
BstMBI	GATC	6 cut(s)	566, 877, 1111, 1161, 1264, 1459
BstNI	CCWGG	7 cut(s)	355, 389, 815, 1155, 1255, 1289, 1383
BstNSI	RCATGY	1 cut(s)	1003
BstPAI	GACNNNNGTC	1 cut(s)	1256
BstSFI	CTRYAG	1 cut(s)	263
BstSLI	GKGCMC	2 cut(s)	1042, 1362
BstUI	CGCG	3 cut(s)	209, 557, 1441
BstV1I	GCAGC	4 cut(s)	184, 277, 733, 847
BstX2I	RGATCY	1 cut(s)	1111
BstXI	CCANNNNNNTGG	1 cut(s)	361
BstYI	RGATCY	1 cut(s)	1111
BsuRI	GGCC	6 cut(s)	194, 260, 353, 386, 725, 935
BtrI	CACGTC	1 cut(s)	1313
BtsCI	GGATG	5 cut(s)	289, 880, 911, 1039, 1566
BtsI	GCAGTG	1 cut(s)	1483
BtsIMutI	CAGTG	2 cut(s)	1452, 1483
BtuMI	TCGCGA	2 cut(s)	557, 1441
Cac8I	GCNNGC	5 cut(s)	207, 375, 797, 826, 1439
CaiI	CAGNNNCTG	1 cut(s)	820
CciI	TCATGA	2 cut(s)	852, 888
CfoI	GCGC	2 cut(s)	205, 449
Cfr10I	RCCGGY	2 cut(s)	214, 604
Cfr13I	GGNCC	4 cut(s)	259, 385, 723, 1102
CseI	GACGC	1 cut(s)	644
Csp6I	GTAC	5 cut(s)	277, 811, 979, 1020, 1340
CspCI	CAANNNNNGTGG	2 cut(s)	986, 1021
CviAII	CATG	8 cut(s)	478, 853, 889, 917, 1000, 1043, 1195, 1274
CviQI	GTAC	5 cut(s)	277, 811, 979, 1020, 1340
DdeI	CTNAG	8 cut(s)	426, 786, 1055, 1188, 1335, 1463, 1509, 1547
DinI	GGCGCC	1 cut(s)	204
DpnI	GATC	6 cut(s)	568, 879, 1113, 1163, 1266, 1461
DpnII	GATC	6 cut(s)	566, 877, 1111, 1161, 1264, 1459
DraIII	CACNNNGTG	1 cut(s)	1298
DrdI	GACNNNNNNGTC	1 cut(s)	319
DseDI	GACNNNNNNGTC	1 cut(s)	319
Eam1104I	CTCTTC	2 cut(s)	576, 1547
EarI	CTCTTC	2 cut(s)	576, 1547
EciI	GGCGGA	3 cut(s)	127, 982, 1220
Ecl136II	GAGCTC	1 cut(s)	1467
Eco24I	GRGCYC	1 cut(s)	1469
Eco31I	GGTCTC	1 cut(s)	1264
Eco47I	GGWCC	1 cut(s)	1102
Eco53kI	GAGCTC	1 cut(s)	1467
Eco57I	CTGAAG	2 cut(s)	454, 467
Eco88I	CYCGRG	1 cut(s)	1492
EcoICRI	GAGCTC	1 cut(s)	1467
EcoO109I	RGGNCCY	1 cut(s)	259
EcoRI	GAATTC	1 cut(s)	1389
EcoRII	CCWGG	7 cut(s)	353, 387, 813, 1153, 1253, 1287, 1381
EcoT22I	ATGCAT	1 cut(s)	1275
EcoT38I	GRGCYC	1 cut(s)	1469
EgeI	GGCGCC	1 cut(s)	204
EheI	GGCGCC	1 cut(s)	204
Esp3I	CGTCTC	1 cut(s)	293
FaeI	CATG	8 cut(s)	481, 856, 892, 920, 1003, 1046, 1198, 1277
FaqI	GGGAC	2 cut(s)	148, 476
FatI	CATG	8 cut(s)	477, 852, 888, 916, 999, 1042, 1194, 1273
FauI	CCCGC	2 cut(s)	214, 538
FbaI	TGATCA	1 cut(s)	877
FblI	GTMKAC	1 cut(s)	834
FokI	GGATG	5 cut(s)	296, 867, 898, 1046, 1573
FriOI	GRGCYC	1 cut(s)	1469
FspBI	CTAG	4 cut(s)	654, 825, 1143, 1176
GlaI	GCGC	2 cut(s)	204, 448
GsaI	CCCAGC	1 cut(s)	20
GsuI	CTGGAG	1 cut(s)	317
HaeII	RGCGCY	2 cut(s)	206, 450
HaeIII	GGCC	6 cut(s)	194, 260, 353, 386, 725, 935
HgaI	GACGC	1 cut(s)	644
HhaI	GCGC	2 cut(s)	205, 449
Hin1I	GRCGYC	1 cut(s)	203
Hin1II	CATG	8 cut(s)	481, 856, 892, 920, 1003, 1046, 1198, 1277
Hin6I	GCGC	2 cut(s)	203, 447
HinP1I	GCGC	2 cut(s)	203, 447
HincII	GTYRAC	2 cut(s)	835, 1120
HindII	GTYRAC	2 cut(s)	835, 1120
HindIII	AAGCTT	1 cut(s)	1205
HinfI	GANTC	8 cut(s)	152, 320, 474, 772, 962, 1200, 1302, 1322
HpaI	GTTAAC	1 cut(s)	1120
HphI	GGTGA	5 cut(s)	74, 607, 644, 1025, 1099
Hpy166II	GTNNAC	6 cut(s)	289, 610, 835, 1120, 1301, 1360
Hpy188I	TCNGA	7 cut(s)	333, 473, 486, 501, 711, 1264, 1464
Hpy8I	GTNNAC	6 cut(s)	289, 610, 835, 1120, 1301, 1360
Hpy99I	CGWCG	3 cut(s)	173, 176, 839
HpyAV	CCTTC	8 cut(s)	117, 250, 478, 725, 1152, 1364, 1537, 1551
HpyCH4III	ACNGT	4 cut(s)	304, 422, 874, 1447
HpyCH4IV	ACGT	3 cut(s)	1312, 1471, 1573
HpyCH4V	TGCA	9 cut(s)	45, 265, 409, 754, 928, 1273, 1360, 1428, 1538
HpyF3I	CTNAG	8 cut(s)	426, 786, 1055, 1188, 1335, 1463, 1509, 1547
HpySE526I	ACGT	3 cut(s)	1312, 1471, 1573
Hsp92I	GRCGYC	1 cut(s)	203
Hsp92II	CATG	8 cut(s)	481, 856, 892, 920, 1003, 1046, 1198, 1277
HspAI	GCGC	2 cut(s)	203, 447
KasI	GGCGCC	1 cut(s)	202
Kpn2I	TCCGGA	2 cut(s)	221, 271
KpnI	GGTACC	1 cut(s)	814
Ksp22I	TGATCA	1 cut(s)	877
KspAI	GTTAAC	1 cut(s)	1120
Kzo9I	GATC	6 cut(s)	566, 877, 1111, 1161, 1264, 1459
LmnI	GCTCC	3 cut(s)	231, 995, 1374
Lsp1109I	GCAGC	4 cut(s)	184, 277, 733, 847
LweI	GCATC	2 cut(s)	937, 1089
MaeI	CTAG	4 cut(s)	654, 825, 1143, 1176
MaeII	ACGT	3 cut(s)	1312, 1471, 1573
MaeIII	GTNAC	7 cut(s)	632, 760, 1145, 1249, 1417, 1447, 1472
MalI	GATC	6 cut(s)	568, 879, 1113, 1163, 1266, 1461
MboI	GATC	6 cut(s)	566, 877, 1111, 1161, 1264, 1459
MboII	GAAGA	5 cut(s)	549, 593, 598, 710, 1564
MflI	RGATCY	1 cut(s)	1111
MhlI	GDGCHC	4 cut(s)	309, 1042, 1362, 1469
MluCI	AATT	1 cut(s)	1389
Mly113I	GGCGCC	1 cut(s)	203
MlyI	GAGTC	4 cut(s)	146, 329, 1209, 1296
Mph1103I	ATGCAT	1 cut(s)	1275
MroI	TCCGGA	2 cut(s)	221, 271
MseI	TTAA	2 cut(s)	1119, 1586
MslI	CAYNNNNRTG	1 cut(s)	1085
MspA1I	CMGCKG	3 cut(s)	197, 243, 572
Mva1269I	GAATGC	2 cut(s)	862, 1346
MvaI	CCWGG	7 cut(s)	355, 389, 815, 1155, 1255, 1289, 1383
MvnI	CGCG	3 cut(s)	209, 557, 1441
NarI	GGCGCC	1 cut(s)	203
NciI	CCSGG	3 cut(s)	281, 830, 1024
NdeII	GATC	6 cut(s)	566, 877, 1111, 1161, 1264, 1459
NheI	GCTAGC	1 cut(s)	824
NlaIII	CATG	8 cut(s)	481, 856, 892, 920, 1003, 1046, 1198, 1277
NlaIV	GGNNCC	6 cut(s)	204, 812, 1039, 1104, 1293, 1376
NmeAIII	GCCGAG	2 cut(s)	202, 403
NmuCI	GTSAC	4 cut(s)	632, 1249, 1417, 1447
NruI	TCGCGA	2 cut(s)	557, 1441
NsiI	ATGCAT	1 cut(s)	1275
NspI	RCATGY	1 cut(s)	1003
PagI	TCATGA	2 cut(s)	852, 888
PasI	CCCWGGG	1 cut(s)	388
PctI	GAATGC	2 cut(s)	862, 1346
PfeI	GAWTC	4 cut(s)	474, 772, 962, 1322
PflMI	CCANNNNNTGG	2 cut(s)	820, 1274
PleI	GAGTC	4 cut(s)	146, 328, 1208, 1296
PluTI	GGCGCC	1 cut(s)	206
PpsI	GAGTC	4 cut(s)	146, 328, 1208, 1296
PshAI	GACNNNNGTC	1 cut(s)	1256
Psp124BI	GAGCTC	1 cut(s)	1469
Psp1406I	AACGTT	1 cut(s)	1573
Psp6I	CCWGG	7 cut(s)	353, 387, 813, 1153, 1253, 1287, 1381
PspFI	CCCAGC	1 cut(s)	16
PspGI	CCWGG	7 cut(s)	353, 387, 813, 1153, 1253, 1287, 1381
PspN4I	GGNNCC	6 cut(s)	204, 812, 1039, 1104, 1293, 1376
PspPI	GGNCC	4 cut(s)	259, 385, 723, 1102
PstI	CTGCAG	1 cut(s)	267
PstNI	CAGNNNCTG	1 cut(s)	820
PsuI	RGATCY	1 cut(s)	1111
PvuII	CAGCTG	1 cut(s)	243
RruI	TCGCGA	2 cut(s)	557, 1441
RsaI	GTAC	5 cut(s)	278, 812, 980, 1021, 1341
RsaNI	GTAC	5 cut(s)	277, 811, 979, 1020, 1340
RseI	CAYNNNNRTG	1 cut(s)	1085
SacI	GAGCTC	1 cut(s)	1469
SalI	GTCGAC	1 cut(s)	833
SaqAI	TTAA	2 cut(s)	1119, 1586
Sau3AI	GATC	6 cut(s)	566, 877, 1111, 1161, 1264, 1459
Sau96I	GGNCC	4 cut(s)	259, 385, 723, 1102
SchI	GAGTC	4 cut(s)	146, 329, 1209, 1296
SduI	GDGCHC	4 cut(s)	309, 1042, 1362, 1469
SfaNI	GCATC	2 cut(s)	937, 1089
SfcI	CTRYAG	1 cut(s)	263
SfoI	GGCGCC	1 cut(s)	204
SinI	GGWCC	1 cut(s)	1102
SmiMI	CAYNNNNRTG	1 cut(s)	1085
SmlI	CTYRAG	2 cut(s)	308, 1517
SmoI	CTYRAG	2 cut(s)	308, 1517
Sse9I	AATT	1 cut(s)	1389
SspDI	GGCGCC	1 cut(s)	202
SspMI	CTAG	4 cut(s)	654, 825, 1143, 1176
SstI	GAGCTC	1 cut(s)	1469
TaaI	ACNGT	4 cut(s)	304, 422, 874, 1447
TaiI	ACGT	3 cut(s)	1315, 1474, 1576
TaqI	TCGA	3 cut(s)	318, 834, 1128
TasI	AATT	1 cut(s)	1389
TatI	WGTACW	1 cut(s)	978
TauI	GCSGC	8 cut(s)	143, 146, 149, 197, 203, 386, 417, 704
TfiI	GAWTC	4 cut(s)	474, 772, 962, 1322
Tru1I	TTAA	2 cut(s)	1119, 1586
Tru9I	TTAA	2 cut(s)	1119, 1586
TscAI	CASTG	2 cut(s)	1452, 1490
TseFI	GTSAC	4 cut(s)	632, 1249, 1417, 1447
TseI	GCWGC	4 cut(s)	197, 265, 746, 860
Tsp45I	GTSAC	4 cut(s)	632, 1249, 1417, 1447
TspDTI	ATGAA	5 cut(s)	841, 869, 933, 1382, 1519
TspRI	CASTG	2 cut(s)	1452, 1490
Van91I	CCANNNNNTGG	2 cut(s)	820, 1274
VneI	GTGCAC	1 cut(s)	1358
VpaK11BI	GGWCC	1 cut(s)	1102
XapI	RAATTY	1 cut(s)	1389
XbaI	TCTAGA	1 cut(s)	653
XceI	RCATGY	1 cut(s)	1003
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1295
XmiI	GTMKAC	1 cut(s)	834
XspI	CTAG	4 cut(s)	654, 825, 1143, 1176
Zsp2I	ATGCAT	1 cut(s)	1275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.