AT5G03460

positive regulation of cell cycle G2/M phase transition

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
864261 .. 865794
1534 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G03460.1

Sequence Viewer

Length: 270 bp
ATGGTTTGCGTTATGTGTTTGGTGCCTCTGTTCCTCGTCCCGCTCATCAATTTAATGCCTCGAATCATCGATTATTTCATGGCTAAATTGTACGCGTGGCTCGGATGGGAGTACAGGAAGCCAGCGAGAGTTCCTCCAGCTTGTCCTTTCAAGCCAGTTGCTAAAAACGACAACGCCACCAAAGTGGGTGCGGAAACTGGAACTGAAGGTACAGAAACAATAGCTAAACCTGGCGTTGTAGAGGAGACGGGTGGTATTAAGCAGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

89

Amino Acids

9.81

Weight (kDa)

7.67

Isoelectric Point (pI)

45.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03460
fragaria_vesca FvH4_6g16590 FvH4_6g16590 FvH4_6g16590
malus_domestica MD12G1108800.v1.1
prunus_persica Prupe.7G127400_v2.0.a1
pyrus_communis pycom12g10910
rosa_chinensis RchiOBHm_Chr3g0470531
rosa_multiflora Rmu_sc0002115.1_g000009
rosa_rugosa Rorug03G0109800
rosa_samantha Rh3BG184500 Rh3CG175000 Rh3DG190200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 22
AccBSI CCGCTC 1 cut(s) 43
AccII CGCG 1 cut(s) 95
AciI CCGC 2 cut(s) 41, 191
AcuI CTGAAG 1 cut(s) 225
AfaI GTAC 3 cut(s) 92, 113, 211
AflIII ACRYGT 1 cut(s) 93
AgsI TTSAA 1 cut(s) 151
AjnI CCWGG 1 cut(s) 229
AleI CACNNNNGTG 1 cut(s) 182
AluBI AGCT 2 cut(s) 140, 224
AluI AGCT 2 cut(s) 140, 224
Alw26I GTCTC 1 cut(s) 239
BanI GGYRCC 1 cut(s) 22
BccI CCATC 1 cut(s) 99
BciT130I CCWGG 1 cut(s) 231
BcoDI GTCTC 1 cut(s) 239
Bme1390I CCNGG 1 cut(s) 231
BmiI GGNNCC 1 cut(s) 24
BmrFI CCNGG 1 cut(s) 231
BplI GAGNNNNNCTC 2 cut(s) 118, 150
BpmI CTGGAG 1 cut(s) 120
Bsa29I ATCGAT 1 cut(s) 69
Bse1I ACTGG 2 cut(s) 155, 202
BseBI CCWGG 1 cut(s) 231
BseCI ATCGAT 1 cut(s) 69
BseGI GGATG 1 cut(s) 110
BseNI ACTGG 2 cut(s) 155, 202
BseRI GAGGAG 1 cut(s) 257
Bsh1236I CGCG 1 cut(s) 95
BshNI GGYRCC 1 cut(s) 22
BshVI ATCGAT 1 cut(s) 69
BslFI GGGAC 1 cut(s) 23
BsmAI GTCTC 1 cut(s) 239
BsmBI CGTCTC 1 cut(s) 239
BsmFI GGGAC 1 cut(s) 23
BspACI CCGC 2 cut(s) 41, 191
BspDI ATCGAT 1 cut(s) 69
BspFNI CGCG 1 cut(s) 95
BspLI GGNNCC 1 cut(s) 24
BspT107I GGYRCC 1 cut(s) 22
BsrBI CCGCTC 1 cut(s) 43
BsrI ACTGG 2 cut(s) 155, 202
Bst2UI CCWGG 1 cut(s) 231
BstC8I GCNNGC 1 cut(s) 123
BstF5I GGATG 1 cut(s) 110
BstFNI CGCG 1 cut(s) 95
BstMAI GTCTC 1 cut(s) 239
BstNI CCWGG 1 cut(s) 231
BstSCI CCNGG 1 cut(s) 229
BstUI CGCG 1 cut(s) 95
BstXI CCANNNNNNTGG 1 cut(s) 184
Bsu15I ATCGAT 1 cut(s) 69
BsuTUI ATCGAT 1 cut(s) 69
BtsCI GGATG 1 cut(s) 110
Cac8I GCNNGC 1 cut(s) 123
ClaI ATCGAT 1 cut(s) 69
Csp6I GTAC 3 cut(s) 91, 112, 210
CviAII CATG 1 cut(s) 79
CviJI RGCY 6 cut(s) 83, 100, 121, 140, 154, 224
CviKI_1 RGCY 6 cut(s) 83, 100, 121, 140, 154, 224
CviQI GTAC 3 cut(s) 91, 112, 210
Eco57I CTGAAG 1 cut(s) 225
EcoRII CCWGG 1 cut(s) 229
Esp3I CGTCTC 1 cut(s) 239
FaeI CATG 1 cut(s) 82
FaiI YATR 2 cut(s) 14, 80
FaqI GGGAC 1 cut(s) 23
FatI CATG 1 cut(s) 78
FauI CCCGC 1 cut(s) 48
FokI GGATG 1 cut(s) 117
GsuI CTGGAG 1 cut(s) 120
Hin1II CATG 1 cut(s) 82
HinfI GANTC 1 cut(s) 63
Hpy188I TCNGA 1 cut(s) 104
HpyAV CCTTC 1 cut(s) 200
Hsp92II CATG 1 cut(s) 82
LpnPI CCDG 8 cut(s) 100, 135, 150, 168, 183, 216, 243, 248
MbiI CCGCTC 1 cut(s) 43
MluCI AATT 2 cut(s) 49, 86
MluI ACGCGT 1 cut(s) 93
MnlI CCTC 5 cut(s) 36, 44, 69, 144, 235
MseI TTAA 2 cut(s) 53, 258
MslI CAYNNNNRTG 1 cut(s) 182
MspR9I CCNGG 1 cut(s) 231
MvaI CCWGG 1 cut(s) 231
MvnI CGCG 1 cut(s) 95
NlaIII CATG 1 cut(s) 82
NlaIV GGNNCC 1 cut(s) 24
OliI CACNNNNGTG 1 cut(s) 182
PfeI GAWTC 1 cut(s) 63
Psp6I CCWGG 1 cut(s) 229
PspGI CCWGG 1 cut(s) 229
PspN4I GGNNCC 1 cut(s) 24
PsrI GAACNNNNNNTAC 2 cut(s) 193, 225
RsaI GTAC 3 cut(s) 92, 113, 211
RsaNI GTAC 3 cut(s) 91, 112, 210
RseI CAYNNNNRTG 1 cut(s) 182
SaqAI TTAA 2 cut(s) 53, 258
ScrFI CCNGG 1 cut(s) 231
SetI ASST 4 cut(s) 142, 211, 226, 232
SmiMI CAYNNNNRTG 1 cut(s) 182
Sse9I AATT 2 cut(s) 49, 86
SsiI CCGC 2 cut(s) 41, 191
StyD4I CCNGG 1 cut(s) 229
TaqI TCGA 2 cut(s) 61, 69
TasI AATT 2 cut(s) 49, 86
TatI WGTACW 1 cut(s) 111
TfiI GAWTC 1 cut(s) 63
Tru1I TTAA 2 cut(s) 53, 258
Tru9I TTAA 2 cut(s) 53, 258
TspDTI ATGAA 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.