AT5G08740

Pyridine nucleotide-disulphide oxidoreductase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
2848352 .. 2851534
3183 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G08740.1

Sequence Viewer

Length: 1560 bp
ATGGCCGTTCTCTCCTCTGTATCTTCTCTCATACCCTTCTCTTATGGGGCAACGAGACTGACTAGTAAAGCTTCATTAGCCTCAAGAACTTCCGGATTCAATCTCTCTTCTCGTTGGAACTCAACGAGAAACTCCCCTATGTTGTATCTTTCGAGAGCAGTGACAAACAACAGTGGCACCACAGAGATTTCTGATAATGAAACAGCTCCAAGGACTTACTCATGGCCTGATAACAAGAGGCCAAGGGTGTGCATTCTAGGTGGTGGCTTTGGAGGATTGTACACAGCTTTGAGATTAGAATCTCTTGTTTGGCCTGAAGACAAAAAGCCTCAGGTGGTTTTGGTTGACCAATCCGAACGTTTTGTGTTCAAGCCCATGTTGTATGAACTACTCTCTGGAGAAGTTGATGTGTGGGAGATTGCTCCCCGTTTCTCGGATTTGCTTACAAACACGGGGATCCAATTTCTCCGAGATAGAGTGAAAACATTGCTTCCTTGTGACCATTTAGGAGTTAATGGGTCTGAGATTTCTGTTACTGGAGGAACCGTCTTGCTCGAAAGCGGTTTTAAAATCGAATACGATTGGTTGGTTCTTGCTCTTGGCGCTGAATCTAAACTCGATGTTGTTCCCGGTGCAATGGAGTTGGCTTTCCCATTCTACACTCTTGAAGATGCCATTAGGGTTAACGAAAAGCTGAGTAAATTGGAGAGGAAGAATTTTAAAGACGGATCTGCCATAAAAGTAGCTGTTGTTGGCTGCGGTTATGCAGGAGTAGAGTTGGCTGCTACCATATCAGAGAGACTGCAAGATCGTGGAATAGTGCAGTCCATTAACGTATCAAAGAATATACTAACATCAGCCCCTGATGGGAACAGAGAAGCGGCTATGAAGGTCCTTACGTCGAGAAAAGTCCAATTACTCTTAGGTTATCTTGTTCAATCCATAAAGAGAGCAAGCAACCTAGAAGAAGATGAAGGATATTTTTTAGAGCTTCAACCTGCAGAAAGAGGATTAGAGAGTCAAATTATTGAAGCGGATATAGTGTTATGGACAGTTGGTGCTAAGCCTTTGCTTACTAAATTAGAACCCTCGGGTCCCAATGTCCTTCCTTTGAATGCTAGAGGACAAGCGGAAACAGACGAGACACTCCGTGTTAAAGGACATCCACGGATATTTGCATTAGGTGATTCGTCTTCTCTAAGAGACTCAAACGGAAAGATTCTTCCTACAACAGCTCAGGTTGCTTTTCAAGAAGCAGACTTTACTGGCTGGAATATATGGGCAGCTATAAATAACCGACCTTTATTACCATTCAGGTTTCAGAACCTAGGTGAGATGATGACTCTTGGAAGATATGATGCTGCTATATCGCCAAGTTTCATTGAAGGGCTTACACTTGAAGGTCCAATTGGTCACGCAGCGAGAAAACTGGCGTATTTGATTAGACTACCAACTGATGAACACCGGTTTATGGTCAGAATCAGTTGGTTTGCTAAATCTGCTGTTGATTCAATTGCTTTACTTCAGAGCAATCTAACCAAGGTTTTGTCTGGTTCTTGA

Protein Analysis

519

Amino Acids

57.02

Weight (kDa)

6.52

Isoelectric Point (pI)

36.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 82 - 419 1.2e-36 Pyridine nucleotide-disulphide oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08740
fragaria_vesca FvH4_5g00410
malus_domestica MD04G1081700.v1.1
prunus_persica Prupe.5G076700_v2.0.a1 Prupe.5G076700_v2.0.a1
pyrus_communis pycom04g07350
rosa_chinensis RchiOBHm_Chr7g0202111
rosa_laevigata RLG00000003625
rosa_multiflora Rmu_ssc0000228.1_g000001
rosa_roxburghii Rroxscaffold_3G00254850
rosa_rugosa Rorug07G0068000
rosa_samantha Rh7AG195500 Rh7BG196800 Rh7CG206600 Rh7DG202100
rosa_wichuraiana Rw7G017120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1006
AccB1I GGYRCC 1 cut(s) 176
AccIII TCCGGA 1 cut(s) 92
AciI CCGC 5 cut(s) 561, 759, 881, 1034, 1130
AclI AACGTT 1 cut(s) 358
AclWI GGATC 3 cut(s) 451, 464, 736
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 715
AcuI CTGAAG 2 cut(s) 336, 1508
AdeI CACNNNGTG 1 cut(s) 1151
AfaI GTAC 1 cut(s) 281
AfiI CCNNNNNNNGG 3 cut(s) 433, 867, 1471
AgeI ACCGGT 1 cut(s) 1464
AhlI ACTAGT 1 cut(s) 62
AjuI GAANNNNNNNTTGG 2 cut(s) 1392, 1424
AluBI AGCT 8 cut(s) 71, 206, 287, 694, 746, 991, 1235, 1286
AluI AGCT 8 cut(s) 71, 206, 287, 694, 746, 991, 1235, 1286
Alw26I GTCTC 4 cut(s) 49, 793, 1136, 1197
AlwI GGATC 3 cut(s) 451, 464, 736
AlwNI CAGNNNCTG 1 cut(s) 863
Ama87I CYCGRG 1 cut(s) 1090
Aor13HI TCCGGA 1 cut(s) 92
AoxI GGCC 4 cut(s) 3, 224, 239, 311
ApeKI GCWGC 5 cut(s) 756, 782, 1283, 1361, 1418
ApoI RAATTY 1 cut(s) 715
AsiGI ACCGGT 1 cut(s) 1464
AspA2I CCTAGG 1 cut(s) 1327
AspLEI GCGC 1 cut(s) 605
AspS9I GGNCC 3 cut(s) 892, 1094, 1403
AsuC2I CCSGG 1 cut(s) 630
AsuHPI GGTGA 2 cut(s) 1196, 1343
AvaI CYCGRG 1 cut(s) 1090
AvaII GGWCC 3 cut(s) 892, 1094, 1403
AvrII CCTAGG 1 cut(s) 1327
AxyI CCTNAGG 1 cut(s) 330
BamHI GGATCC 1 cut(s) 456
BanI GGYRCC 1 cut(s) 176
BbsI GAAGAC 2 cut(s) 324, 1185
BbvI GCAGC 5 cut(s) 743, 769, 1295, 1348, 1430
BccI CCATC 1 cut(s) 860
BcnI CCSGG 1 cut(s) 630
BcoDI GTCTC 4 cut(s) 49, 793, 1136, 1197
BcuI ACTAGT 1 cut(s) 62
BfaI CTAG 5 cut(s) 63, 257, 962, 1119, 1328
BfmI CTRYAG 1 cut(s) 999
BfoI RGCGCY 1 cut(s) 606
BfuAI ACCTGC 1 cut(s) 1006
BisI GCNGC 6 cut(s) 757, 783, 882, 1284, 1362, 1419
BlnI CCTAGG 1 cut(s) 1327
BlpI GCTNAGC 1 cut(s) 1062
BlsI GCNGC 6 cut(s) 758, 784, 883, 1285, 1363, 1420
Bme1390I CCNGG 1 cut(s) 630
Bme18I GGWCC 3 cut(s) 892, 1094, 1403
BmeT110I CYCGRG 1 cut(s) 1090
BmgT120I GGNCC 3 cut(s) 892, 1094, 1403
BmiI GGNNCC 5 cut(s) 178, 458, 544, 1095, 1096
BmrFI CCNGG 1 cut(s) 630
BmsI GCATC 2 cut(s) 661, 1348
BpiI GAAGAC 2 cut(s) 324, 1185
BpmI CTGGAG 2 cut(s) 417, 558
Bpu10I CCTNAGC 1 cut(s) 1236
Bpu1102I GCTNAGC 1 cut(s) 1062
BpuEI CTTGAG 1 cut(s) 67
BpuMI CCSGG 1 cut(s) 630
BsaBI GATNNNNATC 1 cut(s) 298
BsaJI CCNNGG 6 cut(s) 209, 242, 1089, 1166, 1327, 1539
BsaWI WCCGGW 2 cut(s) 92, 1464
BsaXI ACNNNNNCTCC 2 cut(s) 531, 561
Bsc4I CCNNNNNNNGG 3 cut(s) 433, 867, 1471
Bse118I RCCGGY 1 cut(s) 1464
Bse1I ACTGG 3 cut(s) 541, 1270, 1434
Bse21I CCTNAGG 1 cut(s) 330
Bse3DI GCAATG 2 cut(s) 485, 642
Bse8I GATNNNNATC 1 cut(s) 298
BseAI TCCGGA 1 cut(s) 92
BseDI CCNNGG 6 cut(s) 209, 242, 1089, 1166, 1327, 1539
BseGI GGATG 1 cut(s) 1162
BseJI GATNNNNATC 1 cut(s) 298
BseLI CCNNNNNNNGG 3 cut(s) 433, 867, 1471
BseMI GCAATG 2 cut(s) 485, 642
BseMII CTCAG 4 cut(s) 344, 513, 686, 1250
BseNI ACTGG 3 cut(s) 541, 1270, 1434
BseRI GAGGAG 1 cut(s) 4
BseXI GCAGC 5 cut(s) 743, 769, 1295, 1348, 1430
BsgI GTGCAG 1 cut(s) 842
BshFI GGCC 4 cut(s) 5, 226, 241, 313
BshNI GGYRCC 1 cut(s) 176
BshTI ACCGGT 1 cut(s) 1464
BsiHKCI CYCGRG 1 cut(s) 1090
BsiSI CCGG 3 cut(s) 93, 630, 1465
BslFI GGGAC 1 cut(s) 1080
BslI CCNNNNNNNGG 3 cut(s) 433, 867, 1471
BsmAI GTCTC 4 cut(s) 49, 793, 1136, 1197
BsmFI GGGAC 1 cut(s) 1080
BsmI GAATGC 2 cut(s) 252, 1120
BsnI GGCC 4 cut(s) 5, 226, 241, 313
BsoBI CYCGRG 1 cut(s) 1090
Bsp13I TCCGGA 1 cut(s) 92
Bsp1407I TGTACA 1 cut(s) 279
Bsp143I GATC 3 cut(s) 456, 728, 808
Bsp1720I GCTNAGC 1 cut(s) 1062
BspACI CCGC 5 cut(s) 561, 759, 881, 1034, 1130
BspANI GGCC 4 cut(s) 5, 226, 241, 313
BspCNI CTCAG 4 cut(s) 343, 514, 687, 1249
BspEI TCCGGA 1 cut(s) 92
BspLI GGNNCC 5 cut(s) 178, 458, 544, 1095, 1096
BspMAI CTGCAG 1 cut(s) 1003
BspMI ACCTGC 1 cut(s) 1006
BspPI GGATC 3 cut(s) 451, 464, 736
BspT107I GGYRCC 1 cut(s) 176
BsrDI GCAATG 2 cut(s) 485, 642
BsrFI RCCGGY 1 cut(s) 1464
BsrGI TGTACA 1 cut(s) 279
BsrI ACTGG 3 cut(s) 541, 1270, 1434
BssAI RCCGGY 1 cut(s) 1464
BssECI CCNNGG 6 cut(s) 209, 242, 1089, 1166, 1327, 1539
BssMI GATC 3 cut(s) 456, 728, 808
BssT1I CCWWGG 4 cut(s) 209, 242, 1327, 1539
Bst4CI ACNGT 3 cut(s) 173, 547, 1054
Bst6I CTCTTC 1 cut(s) 112
BstAUI TGTACA 1 cut(s) 279
BstC8I GCNNGC 1 cut(s) 955
BstDEI CTNAG 7 cut(s) 330, 522, 695, 922, 1062, 1199, 1236
BstDSI CCRYGG 1 cut(s) 1166
BstF5I GGATG 1 cut(s) 1162
BstH2I RGCGCY 1 cut(s) 606
BstHHI GCGC 1 cut(s) 605
BstKTI GATC 3 cut(s) 459, 731, 811
BstMAI GTCTC 4 cut(s) 49, 793, 1136, 1197
BstMBI GATC 3 cut(s) 456, 728, 808
BstMWI GCNNNNNNNGC 4 cut(s) 77, 602, 1241, 1499
BstSCI CCNGG 1 cut(s) 628
BstSFI CTRYAG 1 cut(s) 999
BstV1I GCAGC 5 cut(s) 743, 769, 1295, 1348, 1430
BstV2I GAAGAC 2 cut(s) 324, 1185
BstX2I RGATCY 2 cut(s) 456, 728
BstYI RGATCY 2 cut(s) 456, 728
Bsu36I CCTNAGG 1 cut(s) 330
BsuRI GGCC 4 cut(s) 5, 226, 241, 313
BtgI CCRYGG 1 cut(s) 1166
BtsCI GGATG 1 cut(s) 1162
BtsI GCAGTG 1 cut(s) 165
BtsIMutI CAGTG 2 cut(s) 165, 178
BveI ACCTGC 1 cut(s) 1006
Cac8I GCNNGC 1 cut(s) 955
CaiI CAGNNNCTG 1 cut(s) 863
CfoI GCGC 1 cut(s) 605
Cfr10I RCCGGY 1 cut(s) 1464
Cfr13I GGNCC 3 cut(s) 892, 1094, 1403
Csp6I GTAC 1 cut(s) 280
CspAI ACCGGT 1 cut(s) 1464
CviAII CATG 2 cut(s) 222, 376
CviQI GTAC 1 cut(s) 280
DdeI CTNAG 7 cut(s) 330, 522, 695, 922, 1062, 1199, 1236
DpnI GATC 3 cut(s) 458, 730, 810
DpnII GATC 3 cut(s) 456, 728, 808
DraI TTTAAA 2 cut(s) 568, 721
DraIII CACNNNGTG 1 cut(s) 1151
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 112
EarI CTCTTC 1 cut(s) 112
Eco130I CCWWGG 4 cut(s) 209, 242, 1327, 1539
Eco47I GGWCC 3 cut(s) 892, 1094, 1403
Eco57I CTGAAG 2 cut(s) 336, 1508
Eco81I CCTNAGG 1 cut(s) 330
Eco88I CYCGRG 1 cut(s) 1090
EcoO109I RGGNCCY 2 cut(s) 892, 1094
EcoT14I CCWWGG 4 cut(s) 209, 242, 1327, 1539
ErhI CCWWGG 4 cut(s) 209, 242, 1327, 1539
FaeI CATG 2 cut(s) 225, 379
FaqI GGGAC 1 cut(s) 1080
FatI CATG 2 cut(s) 221, 375
Fnu4HI GCNGC 6 cut(s) 757, 783, 882, 1284, 1362, 1419
FokI GGATG 1 cut(s) 1149
Fsp4HI GCNGC 6 cut(s) 757, 783, 882, 1284, 1362, 1419
FspBI CTAG 5 cut(s) 63, 257, 962, 1119, 1328
GlaI GCGC 1 cut(s) 604
GluI GCNGC 6 cut(s) 757, 783, 882, 1284, 1362, 1419
GsuI CTGGAG 2 cut(s) 417, 558
HaeII RGCGCY 1 cut(s) 606
HaeIII GGCC 4 cut(s) 5, 226, 241, 313
HapII CCGG 3 cut(s) 93, 630, 1465
HhaI GCGC 1 cut(s) 605
Hin1II CATG 2 cut(s) 225, 379
Hin6I GCGC 1 cut(s) 603
HinP1I GCGC 1 cut(s) 603
HincII GTYRAC 2 cut(s) 346, 685
HindII GTYRAC 2 cut(s) 346, 685
HindIII AAGCTT 1 cut(s) 69
HpaI GTTAAC 1 cut(s) 685
HpaII CCGG 3 cut(s) 93, 630, 1465
HphI GGTGA 2 cut(s) 1196, 1343
Hpy166II GTNNAC 3 cut(s) 282, 346, 685
Hpy188I TCNGA 9 cut(s) 193, 355, 436, 470, 523, 796, 1323, 1478, 1527
Hpy188III TCNNGA 8 cut(s) 84, 93, 153, 396, 665, 903, 1250, 1557
Hpy8I GTNNAC 3 cut(s) 282, 346, 685
Hpy99I CGWCG 1 cut(s) 904
HpyAV CCTTC 6 cut(s) 46, 883, 968, 1115, 1379, 1394
HpyCH4III ACNGT 3 cut(s) 173, 547, 1054
HpyCH4IV ACGT 3 cut(s) 358, 834, 899
HpyCH4V TGCA 7 cut(s) 252, 635, 767, 805, 823, 1001, 1178
HpyF10VI GCNNNNNNNGC 4 cut(s) 77, 602, 1241, 1499
HpyF3I CTNAG 7 cut(s) 330, 522, 695, 922, 1062, 1199, 1236
HpySE526I ACGT 3 cut(s) 358, 834, 899
Hsp92II CATG 2 cut(s) 225, 379
HspAI GCGC 1 cut(s) 603
KflI GGGWCCC 1 cut(s) 1094
Kpn2I TCCGGA 1 cut(s) 92
KspAI GTTAAC 1 cut(s) 685
Kzo9I GATC 3 cut(s) 456, 728, 808
LmnI GCTCC 2 cut(s) 211, 427
Lsp1109I GCAGC 5 cut(s) 743, 769, 1295, 1348, 1430
LweI GCATC 2 cut(s) 661, 1348
MaeI CTAG 5 cut(s) 63, 257, 962, 1119, 1328
MaeII ACGT 3 cut(s) 358, 834, 899
MaeIII GTNAC 4 cut(s) 160, 497, 532, 1412
MalI GATC 3 cut(s) 458, 730, 810
MboI GATC 3 cut(s) 456, 728, 808
MfeI CAATTG 2 cut(s) 1407, 1512
MflI RGATCY 2 cut(s) 456, 728
MluCI AATT 8 cut(s) 461, 701, 715, 914, 1023, 1079, 1407, 1512
MlyI GAGTC 3 cut(s) 1027, 1199, 1336
MmeI TCCRAC 1 cut(s) 95
MroI TCCGGA 1 cut(s) 92
MseI TTAA 6 cut(s) 513, 567, 684, 720, 831, 1155
MspI CCGG 3 cut(s) 93, 630, 1465
MspR9I CCNGG 1 cut(s) 630
MunI CAATTG 2 cut(s) 1407, 1512
Mva1269I GAATGC 2 cut(s) 252, 1120
MwoI GCNNNNNNNGC 4 cut(s) 77, 602, 1241, 1499
NciI CCSGG 1 cut(s) 630
NdeII GATC 3 cut(s) 456, 728, 808
NlaIII CATG 2 cut(s) 225, 379
NlaIV GGNNCC 5 cut(s) 178, 458, 544, 1095, 1096
NmuCI GTSAC 3 cut(s) 160, 497, 1412
PctI GAATGC 2 cut(s) 252, 1120
PfeI GAWTC 7 cut(s) 96, 299, 608, 1187, 1219, 1479, 1508
PinAI ACCGGT 1 cut(s) 1464
PkrI GCNGC 6 cut(s) 758, 784, 883, 1285, 1363, 1420
PleI GAGTC 3 cut(s) 1026, 1199, 1336
PpsI GAGTC 3 cut(s) 1026, 1199, 1336
PpuMI RGGWCCY 2 cut(s) 892, 1094
Psp1406I AACGTT 1 cut(s) 358
Psp5II RGGWCCY 2 cut(s) 892, 1094
PspN4I GGNNCC 5 cut(s) 178, 458, 544, 1095, 1096
PspPI GGNCC 3 cut(s) 892, 1094, 1403
PspPPI RGGWCCY 2 cut(s) 892, 1094
PstI CTGCAG 1 cut(s) 1003
PstNI CAGNNNCTG 1 cut(s) 863
PsuI RGATCY 2 cut(s) 456, 728
RsaI GTAC 1 cut(s) 281
RsaNI GTAC 1 cut(s) 280
SaqAI TTAA 6 cut(s) 513, 567, 684, 720, 831, 1155
SatI GCNGC 6 cut(s) 757, 783, 882, 1284, 1362, 1419
Sau3AI GATC 3 cut(s) 456, 728, 808
Sau96I GGNCC 3 cut(s) 892, 1094, 1403
SchI GAGTC 3 cut(s) 1027, 1199, 1336
ScrFI CCNGG 1 cut(s) 630
SfaNI GCATC 2 cut(s) 661, 1348
SfcI CTRYAG 1 cut(s) 999
SinI GGWCC 3 cut(s) 892, 1094, 1403
SmlI CTYRAG 1 cut(s) 82
SmoI CTYRAG 1 cut(s) 82
SpeI ACTAGT 1 cut(s) 62
Sse9I AATT 8 cut(s) 461, 701, 715, 914, 1023, 1079, 1407, 1512
SsiI CCGC 5 cut(s) 561, 759, 881, 1034, 1130
SspMI CTAG 5 cut(s) 63, 257, 962, 1119, 1328
StyD4I CCNGG 1 cut(s) 628
StyI CCWWGG 4 cut(s) 209, 242, 1327, 1539
TaaI ACNGT 3 cut(s) 173, 547, 1054
TaiI ACGT 3 cut(s) 361, 837, 902
TaqI TCGA 5 cut(s) 152, 555, 573, 618, 902
TasI AATT 8 cut(s) 461, 701, 715, 914, 1023, 1079, 1407, 1512
TatI WGTACW 1 cut(s) 279
TauI GCSGC 1 cut(s) 884
TfiI GAWTC 7 cut(s) 96, 299, 608, 1187, 1219, 1479, 1508
Tru1I TTAA 6 cut(s) 513, 567, 684, 720, 831, 1155
Tru9I TTAA 6 cut(s) 513, 567, 684, 720, 831, 1155
TscAI CASTG 2 cut(s) 165, 178
TseFI GTSAC 3 cut(s) 160, 497, 1412
TseI GCWGC 5 cut(s) 756, 782, 1283, 1361, 1418
Tsp45I GTSAC 3 cut(s) 160, 497, 1412
TspDTI ATGAA 7 cut(s) 63, 213, 399, 902, 987, 1369, 1473
TspGWI ACGGA 4 cut(s) 741, 1139, 1183, 1227
TspRI CASTG 2 cut(s) 165, 178
VpaK11BI GGWCC 3 cut(s) 892, 1094, 1403
XapI RAATTY 1 cut(s) 715
XmaJI CCTAGG 1 cut(s) 1327
XspI CTAG 5 cut(s) 63, 257, 962, 1119, 1328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.