Rroxscaffold_3G00254850

Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic mitochondrial

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0015162
Physical Location & Seq
Forward (+)
49153754 .. 49156969
3216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00254850.1

Sequence Viewer

Length: 1698 bp
ATGGGTTGGGTTGTGGTGGCGTGGGGTTTTGGGGATAACGAAAAACCAACTGATAAAACTGTAATTATGTCAACGACTGCATTTGCTGCTTCAGCAACTCTTTTACGGCTCAATTGTGAGGCAAAGCACCAGGGTAGGTTATTTCCTGATTTCTCGAGAAGAGGCCGGTCTAAGATATCTAAGATATCGCTATTTGCTAGTTCACGAAGGAAAAGCTTTCAGTTTGTTGTTGCTTCAAGTCCTTCTGGGGGGAATGGAGGTGTTGCGGAGATAGAAGCTGAAAGTGCCCCTCGGTATTATTCTTGGCCGGATGAGAAGAAACCAAGGGTGTGTATACTAGGTGGTGGGTTTGGAGGTTTGTATACTGCTCTAAGACTAGAATCATTGGTATGGCCTGATGACAAGAAGCCTCAGGTGCTCCTGGTTGACCAGTCTGAACACTTTGTTTTTAAGCCAATGCTGTATGAGCTTCTGTCCGGAGAAGTTGATGCGTGGGAGATAGCACCTCGCTTCTCAGACCTGCTGGCAAATACAAATGTGCTGTTTTTTCAAGACAAGGTCAAACTCTTGTACCCCTCTGATCATTTGGTAATCAATGGACCTGCAAAATCAAGTGCTGGAGGAAGTGTACTTCTTGAGAGTGGTCTTCTTATTGAATATGACTGGCTGGTGCTTTCTCTGGGTGCTGAAGCTAAGCTTGATGTTGTACCAGGAGCGTCAGAGTTTGCATTGCCATTCTCCACTCTGGAGGATGCTCGCAAGGTTGATCTTAGGCTAAGAGAATTGGAGAGGAGAAAGTTCAGCAAGGAACCTCTAATACATGTGGTGGTTGTTGGTTGTGGTTACGCTGGAGTTGAGTTAGCTGCCACAGTTTCGGAGAGACTGCAGGACAGAGGTATAGTACAAGCAATTAATGTAGAAAACACAATCTGCCCAAATGCCCCGCCTGGAAATAGGGAAGCTGCGACTAAAGTTCTCTCATCGAGGAAAGTTGAACTTCTGTTGGGTTACTTTGTTCGTTGTATTCGTCAAGTTGTTGATGCAAAAGCTTCAGAAAAACCGACAAAGAGCATAGGAGTTGAAGGCATTGCTGCAGAACATGATTTTGGGAAATATATTTTGGAACTTCAACCTACTGAAAAGGGATTACAAAGTCAAACTATTGAAGCAGATCTTGTCTTATGGACTGTTGGGTCTAAATCTCTTCTTCCTCAGCTGGAACCCGGTAACAGGCACGGTGCGCTTCCCTTAAATGGCAGGGGCCAAGCAGAAACAGATGAAACACTTCGTGTTAATGGTCACCCACGCATATTTGCAGTTGGTGATTCTTCTGCTCTAAGGGAATCAAATGGAAGGCTTCTTCCTGCCACTGCACAGGTCGCTTTTCAGCAAGCAGACTTTGCTGGTTGGAATCTGTGGGCTGCAATAAACAACCGCCCGCTTTTGCCTTTCAGGTTTCAGAATTTAGGCGAAATGATTACTTTGGGGAGAAATGATGCTGCCATTTCTCCAAGTTTCATCGAGGGGTTAACGTTAGATGGTCCTTTGGGTCATACCGCGAGGAAACTAGCCTACTTGATTAGATTACCAACTGATGAGCATAGGCTTAAAGTAGGGATCAGTTGGCTTACAAAATCTGCTATAGATTCAGTTGCATCTCTACAGAGCACCCTGACGAAGGTTATTTCAAACTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3 Pyr_redox_2

Protein Analysis

565

Amino Acids

61.74

Weight (kDa)

7.65

Isoelectric Point (pI)

35.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 109 - 465 8.1e-33 Pyridine nucleotide-disulphide oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08740
fragaria_vesca FvH4_5g00410
malus_domestica MD04G1081700.v1.1
prunus_persica Prupe.5G076700_v2.0.a1 Prupe.5G076700_v2.0.a1
pyrus_communis pycom04g07350
rosa_chinensis RchiOBHm_Chr7g0202111
rosa_laevigata RLG00000003625
rosa_multiflora Rmu_ssc0000228.1_g000001
rosa_roxburghii Rroxscaffold_3G00254850
rosa_rugosa Rorug07G0068000
rosa_samantha Rh7AG195500 Rh7BG196800 Rh7CG206600 Rh7DG202100
rosa_wichuraiana Rw7G017120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1192
Acc36I ACCTGC 2 cut(s) 528, 610
AccI GTMKAC 2 cut(s) 334, 362
AccII CGCG 1 cut(s) 1559
AccIII TCCGGA 1 cut(s) 476
AciI CCGC 5 cut(s) 266, 944, 1435, 1439, 1557
AclI AACGTT 1 cut(s) 1532
AclWI GGATC 1 cut(s) 1625
AcoI YGGCCR 1 cut(s) 305
AcsI RAATTY 1 cut(s) 1462
AcuI CTGAAG 3 cut(s) 75, 708, 1035
AdeI CACNNNGTG 1 cut(s) 1289
AfaI GTAC 4 cut(s) 572, 630, 708, 903
AfiI CCNNNNNNNGG 4 cut(s) 248, 1230, 1253, 1678
AflIII ACRYGT 1 cut(s) 820
AgsI TTSAA 8 cut(s) 237, 551, 656, 995, 1082, 1130, 1166, 1689
AjnI CCWGG 4 cut(s) 129, 420, 709, 946
AjuI GAANNNNNNNTTGG 4 cut(s) 1089, 1103, 1121, 1135
AluBI AGCT 9 cut(s) 216, 278, 469, 692, 697, 863, 962, 1049, 1216
AluI AGCT 9 cut(s) 216, 278, 469, 692, 697, 863, 962, 1049, 1216
Alw21I GWGCWC 2 cut(s) 420, 1670
Alw26I GTCTC 1 cut(s) 874
AlwI GGATC 1 cut(s) 1625
Ama87I CYCGRG 1 cut(s) 154
Aor13HI TCCGGA 1 cut(s) 476
AoxI GGCC 4 cut(s) 163, 305, 392, 1261
ApeKI GCWGC 6 cut(s) 86, 863, 962, 1091, 1421, 1499
ApoI RAATTY 1 cut(s) 1462
AseI ATTAAT 1 cut(s) 912
Asp700I GAANNNNTTC 1 cut(s) 1284
AspLEI GCGC 1 cut(s) 1243
AspS9I GGNCC 3 cut(s) 599, 1261, 1541
AsuC2I CCSGG 1 cut(s) 1224
AsuHPI GGTGA 2 cut(s) 1292, 1334
AvaI CYCGRG 1 cut(s) 154
AvaII GGWCC 2 cut(s) 599, 1541
AxyI CCTNAGG 1 cut(s) 411
BaeGI GKGCMC 1 cut(s) 289
BaeI ACNNNNGTAYC 2 cut(s) 554, 587
BbsI GAAGAC 1 cut(s) 638
Bbv12I GWGCWC 2 cut(s) 420, 1670
BbvCI CCTCAGC 1 cut(s) 1212
BbvI GCAGC 6 cut(s) 73, 850, 949, 1078, 1408, 1486
BccI CCATC 1 cut(s) 1532
BceAI ACGGC 1 cut(s) 122
BciT130I CCWGG 4 cut(s) 131, 422, 711, 948
BclI TGATCA 1 cut(s) 580
BcnI CCSGG 1 cut(s) 1224
BcoDI GTCTC 1 cut(s) 874
BfaI CTAG 4 cut(s) 198, 338, 377, 1568
BfmI CTRYAG 4 cut(s) 884, 1092, 1641, 1661
BfuAI ACCTGC 2 cut(s) 528, 610
BglII AGATCT 1 cut(s) 1171
BisI GCNGC 6 cut(s) 87, 864, 963, 1092, 1422, 1500
BlpI GCTNAGC 1 cut(s) 693
BlsI GCNGC 6 cut(s) 88, 865, 964, 1093, 1423, 1501
Bme1390I CCNGG 5 cut(s) 131, 422, 711, 948, 1224
Bme18I GGWCC 2 cut(s) 599, 1541
BmeT110I CYCGRG 1 cut(s) 154
BmgT120I GGNCC 3 cut(s) 599, 1261, 1541
BmiI GGNNCC 3 cut(s) 810, 1221, 1262
BmrFI CCNGG 5 cut(s) 131, 422, 711, 948, 1224
BmsI GCATC 5 cut(s) 478, 742, 1030, 1486, 1664
BpiI GAAGAC 1 cut(s) 638
BpmI CTGGAG 3 cut(s) 639, 767, 870
Bpu10I CCTNAGC 1 cut(s) 1212
Bpu1102I GCTNAGC 1 cut(s) 693
BpuEI CTTGAG 1 cut(s) 656
BpuMI CCSGG 1 cut(s) 1224
BsaJI CCNNGG 3 cut(s) 130, 290, 323
BsaWI WCCGGW 1 cut(s) 476
BsaXI ACNNNNNCTCC 2 cut(s) 612, 642
Bsc4I CCNNNNNNNGG 4 cut(s) 248, 1230, 1253, 1678
Bse118I RCCGGY 1 cut(s) 165
Bse1I ACTGG 2 cut(s) 430, 668
Bse21I CCTNAGG 1 cut(s) 411
Bse3DI GCAATG 2 cut(s) 728, 1086
BseAI TCCGGA 1 cut(s) 476
BseBI CCWGG 4 cut(s) 131, 422, 711, 948
BseDI CCNNGG 3 cut(s) 130, 290, 323
BseGI GGATG 2 cut(s) 316, 757
BseLI CCNNNNNNNGG 4 cut(s) 248, 1230, 1253, 1678
BseMI GCAATG 2 cut(s) 728, 1086
BseMII CTCAG 3 cut(s) 425, 528, 1226
BseNI ACTGG 2 cut(s) 430, 668
BseRI GAGGAG 1 cut(s) 805
BseSI GKGCMC 1 cut(s) 289
BseXI GCAGC 6 cut(s) 73, 850, 949, 1078, 1408, 1486
BsgI GTGCAG 1 cut(s) 1356
Bsh1236I CGCG 1 cut(s) 1559
BshFI GGCC 4 cut(s) 165, 307, 394, 1263
BsiHKAI GWGCWC 2 cut(s) 420, 1670
BsiHKCI CYCGRG 1 cut(s) 154
BsiSI CCGG 4 cut(s) 166, 308, 477, 1224
BslI CCNNNNNNNGG 4 cut(s) 248, 1230, 1253, 1678
BsmAI GTCTC 1 cut(s) 874
BsnI GGCC 4 cut(s) 165, 307, 394, 1263
BsoBI CYCGRG 1 cut(s) 154
Bsp1286I GDGCHC 3 cut(s) 289, 420, 1670
Bsp13I TCCGGA 1 cut(s) 476
Bsp143I GATC 4 cut(s) 580, 766, 1171, 1617
Bsp1720I GCTNAGC 1 cut(s) 693
BspACI CCGC 5 cut(s) 266, 944, 1435, 1439, 1557
BspANI GGCC 4 cut(s) 165, 307, 394, 1263
BspCNI CTCAG 3 cut(s) 424, 527, 1225
BspEI TCCGGA 1 cut(s) 476
BspFNI CGCG 1 cut(s) 1559
BspLI GGNNCC 3 cut(s) 810, 1221, 1262
BspMAI CTGCAG 2 cut(s) 888, 1096
BspMI ACCTGC 2 cut(s) 528, 610
BspPI GGATC 1 cut(s) 1625
BsrDI GCAATG 2 cut(s) 728, 1086
BsrFI RCCGGY 1 cut(s) 165
BsrI ACTGG 2 cut(s) 430, 668
BssAI RCCGGY 1 cut(s) 165
BssECI CCNNGG 3 cut(s) 130, 290, 323
BssMI GATC 4 cut(s) 580, 766, 1171, 1617
BssNAI GTATAC 2 cut(s) 335, 363
BssT1I CCWWGG 1 cut(s) 323
Bst1107I GTATAC 2 cut(s) 335, 363
Bst2UI CCWGG 4 cut(s) 131, 422, 711, 948
Bst4CI ACNGT 4 cut(s) 61, 871, 1189, 1238
Bst6I CTCTTC 2 cut(s) 154, 1209
BstAPI GCANNNNNTGC 2 cut(s) 86, 1400
BstC8I GCNNGC 4 cut(s) 525, 757, 1392, 1439
BstEII GGTNACC 1 cut(s) 1298
BstENI CCTNNNNNAGG 1 cut(s) 1676
BstF5I GGATG 2 cut(s) 316, 757
BstFNI CGCG 1 cut(s) 1559
BstHHI GCGC 1 cut(s) 1243
BstKTI GATC 4 cut(s) 583, 769, 1174, 1620
BstMAI GTCTC 1 cut(s) 874
BstMBI GATC 4 cut(s) 580, 766, 1171, 1617
BstMWI GCNNNNNNNGC 8 cut(s) 86, 92, 284, 415, 466, 1240, 1379, 1400
BstNI CCWGG 4 cut(s) 131, 422, 711, 948
BstNSI RCATGY 1 cut(s) 824
BstPI GGTNACC 1 cut(s) 1298
BstSCI CCNGG 5 cut(s) 129, 420, 709, 946, 1222
BstSFI CTRYAG 4 cut(s) 884, 1092, 1641, 1661
BstSLI GKGCMC 1 cut(s) 289
BstUI CGCG 1 cut(s) 1559
BstV1I GCAGC 6 cut(s) 73, 850, 949, 1078, 1408, 1486
BstV2I GAAGAC 1 cut(s) 638
BstX2I RGATCY 1 cut(s) 1171
BstYI RGATCY 1 cut(s) 1171
BstZ17I GTATAC 2 cut(s) 335, 363
Bsu36I CCTNAGG 1 cut(s) 411
BsuRI GGCC 4 cut(s) 165, 307, 394, 1263
BtsCI GGATG 2 cut(s) 316, 757
BtsI GCAGTG 1 cut(s) 1368
BtsIMutI CAGTG 1 cut(s) 1368
BveI ACCTGC 2 cut(s) 528, 610
Cac8I GCNNGC 4 cut(s) 525, 757, 1392, 1439
CfoI GCGC 1 cut(s) 1243
Cfr10I RCCGGY 1 cut(s) 165
Cfr13I GGNCC 3 cut(s) 599, 1261, 1541
CseI GACGC 1 cut(s) 705
Csp6I GTAC 4 cut(s) 571, 629, 707, 902
CviAII CATG 2 cut(s) 821, 1100
CviQI GTAC 4 cut(s) 571, 629, 707, 902
DpnI GATC 4 cut(s) 582, 768, 1173, 1619
DpnII GATC 4 cut(s) 580, 766, 1171, 1617
DraIII CACNNNGTG 1 cut(s) 1289
DrdI GACNNNNNNGTC 1 cut(s) 1192
DseDI GACNNNNNNGTC 1 cut(s) 1192
EaeI YGGCCR 1 cut(s) 305
Eam1104I CTCTTC 2 cut(s) 154, 1209
EarI CTCTTC 2 cut(s) 154, 1209
Eco130I CCWWGG 1 cut(s) 323
Eco32I GATATC 2 cut(s) 177, 186
Eco47I GGWCC 2 cut(s) 599, 1541
Eco57I CTGAAG 3 cut(s) 75, 708, 1035
Eco81I CCTNAGG 1 cut(s) 411
Eco88I CYCGRG 1 cut(s) 154
Eco91I GGTNACC 1 cut(s) 1298
EcoNI CCTNNNNNAGG 1 cut(s) 1676
EcoO65I GGTNACC 1 cut(s) 1298
EcoRII CCWGG 4 cut(s) 129, 420, 709, 946
EcoRV GATATC 2 cut(s) 177, 186
EcoT14I CCWWGG 1 cut(s) 323
ErhI CCWWGG 1 cut(s) 323
FaeI CATG 2 cut(s) 824, 1103
FalI AAGNNNNNCTT 6 cut(s) 681, 713, 981, 1013, 1158, 1190
FatI CATG 2 cut(s) 820, 1099
FauI CCCGC 2 cut(s) 951, 1446
FbaI TGATCA 1 cut(s) 580
FblI GTMKAC 2 cut(s) 334, 362
Fnu4HI GCNGC 6 cut(s) 87, 864, 963, 1092, 1422, 1500
FokI GGATG 2 cut(s) 323, 764
Fsp4HI GCNGC 6 cut(s) 87, 864, 963, 1092, 1422, 1500
FspBI CTAG 4 cut(s) 198, 338, 377, 1568
GlaI GCGC 1 cut(s) 1242
GluI GCNGC 6 cut(s) 87, 864, 963, 1092, 1422, 1500
GsuI CTGGAG 3 cut(s) 639, 767, 870
HaeIII GGCC 4 cut(s) 165, 307, 394, 1263
HapII CCGG 4 cut(s) 166, 308, 477, 1224
HgaI GACGC 1 cut(s) 705
HhaI GCGC 1 cut(s) 1243
Hin1II CATG 2 cut(s) 824, 1103
Hin6I GCGC 1 cut(s) 1241
HinP1I GCGC 1 cut(s) 1241
HincII GTYRAC 3 cut(s) 72, 427, 1530
HindII GTYRAC 3 cut(s) 72, 427, 1530
HindIII AAGCTT 3 cut(s) 214, 695, 1047
HinfI GANTC 5 cut(s) 380, 1325, 1343, 1411, 1646
HpaI GTTAAC 1 cut(s) 1530
HpaII CCGG 4 cut(s) 166, 308, 477, 1224
HphI GGTGA 2 cut(s) 1292, 1334
Hpy166II GTNNAC 7 cut(s) 72, 203, 335, 363, 427, 629, 1530
Hpy188I TCNGA 7 cut(s) 436, 517, 580, 721, 877, 1054, 1461
Hpy188III TCNNGA 8 cut(s) 146, 154, 156, 204, 477, 551, 635, 746
Hpy8I GTNNAC 7 cut(s) 72, 203, 335, 363, 427, 629, 1530
HpyAV CCTTC 5 cut(s) 201, 252, 1076, 1347, 1672
HpyCH4III ACNGT 4 cut(s) 61, 871, 1189, 1238
HpyCH4IV ACGT 1 cut(s) 1532
HpyF10VI GCNNNNNNNGC 8 cut(s) 86, 92, 284, 415, 466, 1240, 1379, 1400
HpySE526I ACGT 1 cut(s) 1532
Hsp92II CATG 2 cut(s) 824, 1103
HspAI GCGC 1 cut(s) 1241
Kpn2I TCCGGA 1 cut(s) 476
Ksp22I TGATCA 1 cut(s) 580
KspAI GTTAAC 1 cut(s) 1530
Kzo9I GATC 4 cut(s) 580, 766, 1171, 1617
LmnI GCTCC 2 cut(s) 423, 713
Lsp1109I GCAGC 6 cut(s) 73, 850, 949, 1078, 1408, 1486
LweI GCATC 5 cut(s) 478, 742, 1030, 1486, 1664
MaeI CTAG 4 cut(s) 198, 338, 377, 1568
MaeII ACGT 1 cut(s) 1532
MaeIII GTNAC 4 cut(s) 842, 1007, 1226, 1298
MalI GATC 4 cut(s) 582, 768, 1173, 1619
MboI GATC 4 cut(s) 580, 766, 1171, 1617
MboII GAAGA 7 cut(s) 171, 328, 638, 1196, 1199, 1320, 1352
MfeI CAATTG 1 cut(s) 112
MflI RGATCY 1 cut(s) 1171
MhlI GDGCHC 3 cut(s) 289, 420, 1670
MluCI AATT 5 cut(s) 63, 112, 782, 909, 1462
MmeI TCCRAC 1 cut(s) 1388
MroI TCCGGA 1 cut(s) 476
MroXI GAANNNNTTC 1 cut(s) 1284
MseI TTAA 6 cut(s) 450, 912, 1250, 1293, 1529, 1608
MslI CAYNNNNRTG 1 cut(s) 388
MspA1I CMGCKG 1 cut(s) 1216
MspI CCGG 4 cut(s) 166, 308, 477, 1224
MspR9I CCNGG 5 cut(s) 131, 422, 711, 948, 1224
MunI CAATTG 1 cut(s) 112
MvaI CCWGG 4 cut(s) 131, 422, 711, 948
MvnI CGCG 1 cut(s) 1559
MwoI GCNNNNNNNGC 8 cut(s) 86, 92, 284, 415, 466, 1240, 1379, 1400
NciI CCSGG 1 cut(s) 1224
NdeII GATC 4 cut(s) 580, 766, 1171, 1617
NlaIII CATG 2 cut(s) 824, 1103
NlaIV GGNNCC 3 cut(s) 810, 1221, 1262
NmuCI GTSAC 1 cut(s) 1298
NspI RCATGY 1 cut(s) 824
PaeR7I CTCGAG 1 cut(s) 154
PciI ACATGT 1 cut(s) 820
PcsI WCGNNNNNNNCGW 1 cut(s) 1024
PdmI GAANNNNTTC 1 cut(s) 1284
PfeI GAWTC 5 cut(s) 380, 1325, 1343, 1411, 1646
PflFI GACNNNGTC 1 cut(s) 557
PkrI GCNGC 6 cut(s) 88, 865, 964, 1093, 1423, 1501
PscI ACATGT 1 cut(s) 820
PshBI ATTAAT 1 cut(s) 912
Psp1406I AACGTT 1 cut(s) 1532
Psp6I CCWGG 4 cut(s) 129, 420, 709, 946
PspEI GGTNACC 1 cut(s) 1298
PspGI CCWGG 4 cut(s) 129, 420, 709, 946
PspN4I GGNNCC 3 cut(s) 810, 1221, 1262
PspPI GGNCC 3 cut(s) 599, 1261, 1541
PsrI GAACNNNNNNTAC 2 cut(s) 801, 833
PstI CTGCAG 2 cut(s) 888, 1096
PsuI RGATCY 1 cut(s) 1171
PsyI GACNNNGTC 1 cut(s) 557
PvuII CAGCTG 1 cut(s) 1216
RsaI GTAC 4 cut(s) 572, 630, 708, 903
RsaNI GTAC 4 cut(s) 571, 629, 707, 902
RseI CAYNNNNRTG 1 cut(s) 388
SaqAI TTAA 6 cut(s) 450, 912, 1250, 1293, 1529, 1608
SatI GCNGC 6 cut(s) 87, 864, 963, 1092, 1422, 1500
Sau3AI GATC 4 cut(s) 580, 766, 1171, 1617
Sau96I GGNCC 3 cut(s) 599, 1261, 1541
ScrFI CCNGG 5 cut(s) 131, 422, 711, 948, 1224
SduI GDGCHC 3 cut(s) 289, 420, 1670
SfaNI GCATC 5 cut(s) 478, 742, 1030, 1486, 1664
SfcI CTRYAG 4 cut(s) 884, 1092, 1641, 1661
Sfr274I CTCGAG 1 cut(s) 154
SinI GGWCC 2 cut(s) 599, 1541
SlaI CTCGAG 1 cut(s) 154
SmiMI CAYNNNNRTG 1 cut(s) 388
SmlI CTYRAG 2 cut(s) 154, 635
SmoI CTYRAG 2 cut(s) 154, 635
Sse9I AATT 5 cut(s) 63, 112, 782, 909, 1462
SsiI CCGC 5 cut(s) 266, 944, 1435, 1439, 1557
SspMI CTAG 4 cut(s) 198, 338, 377, 1568
StyD4I CCNGG 5 cut(s) 129, 420, 709, 946, 1222
StyI CCWWGG 1 cut(s) 323
TaaI ACNGT 4 cut(s) 61, 871, 1189, 1238
TaiI ACGT 1 cut(s) 1535
TaqI TCGA 3 cut(s) 155, 983, 1521
TasI AATT 5 cut(s) 63, 112, 782, 909, 1462
TatI WGTACW 2 cut(s) 628, 901
TfiI GAWTC 5 cut(s) 380, 1325, 1343, 1411, 1646
Tru1I TTAA 6 cut(s) 450, 912, 1250, 1293, 1529, 1608
Tru9I TTAA 6 cut(s) 450, 912, 1250, 1293, 1529, 1608
TscAI CASTG 1 cut(s) 1375
TseFI GTSAC 1 cut(s) 1298
TseI GCWGC 6 cut(s) 86, 863, 962, 1091, 1421, 1499
Tsp45I GTSAC 1 cut(s) 1298
TspDTI ATGAA 2 cut(s) 1293, 1507
TspRI CASTG 1 cut(s) 1375
Tth111I GACNNNGTC 1 cut(s) 557
VpaK11BI GGWCC 2 cut(s) 599, 1541
VspI ATTAAT 1 cut(s) 912
XagI CCTNNNNNAGG 1 cut(s) 1676
XapI RAATTY 1 cut(s) 1462
XceI RCATGY 1 cut(s) 824
XhoI CTCGAG 1 cut(s) 154
XmiI GTMKAC 2 cut(s) 334, 362
XmnI GAANNNNTTC 1 cut(s) 1284
XspI CTAG 4 cut(s) 198, 338, 377, 1568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.