RLG00000003625

Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic mitochondrial

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0015162
Physical Location & Seq
Forward (+)
50894964 .. 50897789
2826 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003625

Sequence Viewer

Length: 1833 bp
ATGGATTTAGCCCATTCCATTCCTCACTCAAGCCCAGCCCACTATCTCCCGACCAAAGTAGAAGAAAAACAACTCACTGTCCTCCTCCTTGTATCGGCAAGTACTTCCTTCCTCGTTGCACGGGTTCCTTCACATCTTCCTCTTCAGTTCTTCACCTGTGATGAGCTAGCCCACTACCCACAAAAAGATAGAACTGTAATTATGTCAACGACTGCATTTGCTGCTTCAGCAACTCTTTTACGGCTCAATTGTGAGGCAAAGCACCAGGCTAGGTTATTTCCCGATTTCTCGAGAAGAGGCCGGTCTAAGATGTCTAAGATATCGCTATTTGCTAGTTCACGAAGGAAAAGCTTTCAGTTTGTTGTTGCTTCAAGTGCTTCTGGGGGGAATGGAGGTGTTGCGGAGATAGAAGCTGAAAGTGCCCCTCGGTATTATTCTTGGCCGGATGAGAAGAAACCAAGGGTGTGTATACTAGGTGGTGGGTTTGGGGGTTTGTATACTGCTCTAAGACTAGAATCATTGGTATGGCCTGATGACAAGAAGCCTCAGGTGCTCCTGGTTGACCAGTCTGAACACTTTGTTTTTAAGCCAATGCTGTATGAGCTTCTGTCCGGAGAAGTCGATGCGTGGGAGATAGCACCTCGCTTCTCAGACCTGCTGGCAAATACAAATGTGCTGTTTTTTCAAGACAAGGTCAAACTCTTGTACCCCTCTGATCATTTGGTAATGAATGGACCTGCAAAATCAAGTGCTGGAGGAAGTGTACTTCTTGACAGCGGTCTTCTTATTGAATATGACTGGCTGGTTCTTTCTCTGGGTGCTGAAGCTAAGCTTGATGTTGTACCAGGAGCGTCAGAGTTTGCATTGCCATTCTCCACTCTGGAGGATGCTCGCAAGGTTGATCTTAGGCTAAGAGAATTGGAGAGGAGAAAGTTCAGCAAGGAATCTCTAATACATGTGGTGGTTGTTGGTTGTGGTTACGCTGGAGTTGAGTTAGCTGCCACAGTTTCGGAGAGACTGCAGGACAGAGGTATAGTACAAGCAATTAATGTAGAAAACACAATCTGCCCAAATGCCCCGCCTGGAAATAGGGAAGCTGCGACTAAAGTTCTGTCATCGAGGAAAGTTGAACTTCTGTTGGGTTACTTTGTTCGTTGTATTCGTCAAGTTGTTGATGCGAAAGCTTCAGAAAAACCGACAAAGAGCATAGGAGTTGAAGGCATTGCTGCAGAACATGATTTTGGGAAATATATTTTGGAACTTCAACCTACTGAAAAGGGATTACAAAGTCAAACTATTGAAGCAGATCTTGTCTTATGGACTGTTGGGTCTAAATCTCTTCTTCCTCAGCTGGAACCTGGTAACAGGCGCGGTGCACTTCCCTTAAATGGCAGGGGCCAAGCAGAAACAGATGAAACACTTCGTGTTAATGGTCACCCACGCATATTTGCAGTTGGTGATTCTTCTGCTCTAAGGGAATCAAATGGAAGACTTCTTCCTGCCACTGCACAGGTCGCTTTTCAGCAAGCAGACTTTGCTGGTTGGAATCTGTGGGCTGCAATAAACAACCGCCCGCTTTTGCCTTTCAGGTTTCAGAATTTAGGCGAAATGATTACTTTGGGGAGAAATGATGCTGCCATTTCTCCAAGTTTCATCGAGGGGCTAACGTTAGATGGTCCTTTGGGTCATACAGCGAGGAAACTAGCCTACTTGATTAGATTACCAACTGATGAGCATAGGCTTAAAGTAGGGATCAGTTGGCTTACAAAATCTGCTATAGATTCCGTTGCATCTCTACAGAGCACCCTGACGAAGGTTATTTCAAACTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3 Pyr_redox_2

Protein Analysis

611

Amino Acids

66.84

Weight (kDa)

8.09

Isoelectric Point (pI)

40.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 154 - 510 1.2e-32 Pyridine nucleotide-disulphide oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08740
fragaria_vesca FvH4_5g00410
malus_domestica MD04G1081700.v1.1
prunus_persica Prupe.5G076700_v2.0.a1 Prupe.5G076700_v2.0.a1
pyrus_communis pycom04g07350
rosa_chinensis RchiOBHm_Chr7g0202111
rosa_laevigata RLG00000003625
rosa_multiflora Rmu_ssc0000228.1_g000001
rosa_roxburghii Rroxscaffold_3G00254850
rosa_rugosa Rorug07G0068000
rosa_samantha Rh7AG195500 Rh7BG196800 Rh7CG206600 Rh7DG202100
rosa_wichuraiana Rw7G017120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1327
Acc36I ACCTGC 2 cut(s) 663, 745
AccI GTMKAC 2 cut(s) 469, 497
AccII CGCG 1 cut(s) 1371
AccIII TCCGGA 1 cut(s) 611
AciI CCGC 6 cut(s) 401, 777, 1079, 1371, 1570, 1574
AclI AACGTT 1 cut(s) 1667
AclWI GGATC 1 cut(s) 1760
AcoI YGGCCR 1 cut(s) 440
AcsI RAATTY 1 cut(s) 1597
AcuI CTGAAG 4 cut(s) 128, 210, 843, 1170
AdeI CACNNNGTG 1 cut(s) 1424
AfaI GTAC 5 cut(s) 103, 707, 765, 843, 1038
AfiI CCNNNNNNNGG 3 cut(s) 94, 1388, 1813
AflIII ACRYGT 1 cut(s) 955
AgsI TTSAA 8 cut(s) 372, 686, 791, 1130, 1217, 1265, 1301, 1824
AjnI CCWGG 5 cut(s) 264, 555, 844, 1081, 1357
AjuI GAANNNNNNNTTGG 4 cut(s) 1224, 1238, 1256, 1270
Alw21I GWGCWC 3 cut(s) 555, 1378, 1805
Alw26I GTCTC 1 cut(s) 1009
Alw44I GTGCAC 1 cut(s) 1374
AlwI GGATC 1 cut(s) 1760
Ama87I CYCGRG 1 cut(s) 289
Aor13HI TCCGGA 1 cut(s) 611
AoxI GGCC 4 cut(s) 298, 440, 527, 1396
ApaLI GTGCAC 1 cut(s) 1374
ApeKI GCWGC 6 cut(s) 221, 998, 1097, 1226, 1556, 1634
ApoI RAATTY 1 cut(s) 1597
AseI ATTAAT 1 cut(s) 1047
Asp700I GAANNNNTTC 1 cut(s) 1419
AspLEI GCGC 1 cut(s) 1371
AspS9I GGNCC 3 cut(s) 734, 1396, 1676
AsuHPI GGTGA 3 cut(s) 145, 1427, 1469
AsuNHI GCTAGC 1 cut(s) 166
AvaI CYCGRG 1 cut(s) 289
AvaII GGWCC 2 cut(s) 734, 1676
AxyI CCTNAGG 1 cut(s) 546
BaeGI GKGCMC 2 cut(s) 424, 1378
BaeI ACNNNNGTAYC 2 cut(s) 689, 722
BbsI GAAGAC 2 cut(s) 773, 1495
Bbv12I GWGCWC 3 cut(s) 555, 1378, 1805
BbvCI CCTCAGC 1 cut(s) 1347
BbvI GCAGC 6 cut(s) 208, 985, 1084, 1213, 1543, 1621
BccI CCATC 1 cut(s) 1667
BceAI ACGGC 1 cut(s) 257
BciT130I CCWGG 5 cut(s) 266, 557, 846, 1083, 1359
BclI TGATCA 1 cut(s) 715
BcoDI GTCTC 1 cut(s) 1009
BfaI CTAG 6 cut(s) 167, 270, 333, 473, 512, 1703
BfmI CTRYAG 4 cut(s) 1019, 1227, 1776, 1796
BfuAI ACCTGC 2 cut(s) 663, 745
BglII AGATCT 1 cut(s) 1306
BisI GCNGC 6 cut(s) 222, 999, 1098, 1227, 1557, 1635
BlpI GCTNAGC 1 cut(s) 828
BlsI GCNGC 6 cut(s) 223, 1000, 1099, 1228, 1558, 1636
BmcAI AGTACT 1 cut(s) 103
Bme1390I CCNGG 5 cut(s) 266, 557, 846, 1083, 1359
Bme18I GGWCC 2 cut(s) 734, 1676
BmeT110I CYCGRG 1 cut(s) 289
BmgT120I GGNCC 3 cut(s) 734, 1396, 1676
BmiI GGNNCC 3 cut(s) 126, 1356, 1397
BmrFI CCNGG 5 cut(s) 266, 557, 846, 1083, 1359
BmsI GCATC 5 cut(s) 613, 877, 1165, 1621, 1799
BmtI GCTAGC 1 cut(s) 170
BoxI GACNNNNGTC 1 cut(s) 777
BpiI GAAGAC 2 cut(s) 773, 1495
BpmI CTGGAG 3 cut(s) 774, 902, 1005
Bpu10I CCTNAGC 1 cut(s) 1347
Bpu1102I GCTNAGC 1 cut(s) 828
BpuEI CTTGAG 1 cut(s) 13
BsaJI CCNNGG 2 cut(s) 425, 458
BsaWI WCCGGW 1 cut(s) 611
BsaXI ACNNNNNCTCC 2 cut(s) 747, 777
Bsc4I CCNNNNNNNGG 3 cut(s) 94, 1388, 1813
Bse118I RCCGGY 1 cut(s) 300
Bse1I ACTGG 2 cut(s) 565, 803
Bse21I CCTNAGG 1 cut(s) 546
Bse3DI GCAATG 2 cut(s) 863, 1221
BseAI TCCGGA 1 cut(s) 611
BseBI CCWGG 5 cut(s) 266, 557, 846, 1083, 1359
BseDI CCNNGG 2 cut(s) 425, 458
BseGI GGATG 2 cut(s) 451, 892
BseLI CCNNNNNNNGG 3 cut(s) 94, 1388, 1813
BseMI GCAATG 2 cut(s) 863, 1221
BseMII CTCAG 3 cut(s) 560, 663, 1361
BseNI ACTGG 2 cut(s) 565, 803
BseRI GAGGAG 2 cut(s) 74, 940
BseSI GKGCMC 2 cut(s) 424, 1378
BseXI GCAGC 6 cut(s) 208, 985, 1084, 1213, 1543, 1621
BseYI CCCAGC 1 cut(s) 34
BsgI GTGCAG 1 cut(s) 1491
Bsh1236I CGCG 1 cut(s) 1371
BshFI GGCC 4 cut(s) 300, 442, 529, 1398
BsiHKAI GWGCWC 3 cut(s) 555, 1378, 1805
BsiHKCI CYCGRG 1 cut(s) 289
BsiSI CCGG 3 cut(s) 301, 443, 612
BslI CCNNNNNNNGG 3 cut(s) 94, 1388, 1813
BsmAI GTCTC 1 cut(s) 1009
BsnI GGCC 4 cut(s) 300, 442, 529, 1398
BsoBI CYCGRG 1 cut(s) 289
Bsp1286I GDGCHC 4 cut(s) 424, 555, 1378, 1805
Bsp13I TCCGGA 1 cut(s) 611
Bsp143I GATC 4 cut(s) 715, 901, 1306, 1752
Bsp1720I GCTNAGC 1 cut(s) 828
BspACI CCGC 6 cut(s) 401, 777, 1079, 1371, 1570, 1574
BspANI GGCC 4 cut(s) 300, 442, 529, 1398
BspCNI CTCAG 3 cut(s) 559, 662, 1360
BspEI TCCGGA 1 cut(s) 611
BspFNI CGCG 1 cut(s) 1371
BspLI GGNNCC 3 cut(s) 126, 1356, 1397
BspMAI CTGCAG 2 cut(s) 1023, 1231
BspMI ACCTGC 2 cut(s) 663, 745
BspOI GCTAGC 1 cut(s) 170
BspPI GGATC 1 cut(s) 1760
BsrDI GCAATG 2 cut(s) 863, 1221
BsrFI RCCGGY 1 cut(s) 300
BsrI ACTGG 2 cut(s) 565, 803
BssAI RCCGGY 1 cut(s) 300
BssECI CCNNGG 2 cut(s) 425, 458
BssMI GATC 4 cut(s) 715, 901, 1306, 1752
BssNAI GTATAC 2 cut(s) 470, 498
BssT1I CCWWGG 1 cut(s) 458
Bst1107I GTATAC 2 cut(s) 470, 498
Bst2UI CCWGG 5 cut(s) 266, 557, 846, 1083, 1359
Bst4CI ACNGT 4 cut(s) 79, 196, 1006, 1324
Bst6I CTCTTC 3 cut(s) 147, 289, 1344
BstAPI GCANNNNNTGC 2 cut(s) 221, 1535
BstC8I GCNNGC 5 cut(s) 168, 660, 892, 1527, 1574
BstEII GGTNACC 1 cut(s) 1433
BstENI CCTNNNNNAGG 1 cut(s) 1811
BstF5I GGATG 2 cut(s) 451, 892
BstFNI CGCG 1 cut(s) 1371
BstHHI GCGC 1 cut(s) 1371
BstKTI GATC 4 cut(s) 718, 904, 1309, 1755
BstMAI GTCTC 1 cut(s) 1009
BstMBI GATC 4 cut(s) 715, 901, 1306, 1752
BstMWI GCNNNNNNNGC 8 cut(s) 221, 227, 374, 419, 550, 601, 1514, 1535
BstNI CCWGG 5 cut(s) 266, 557, 846, 1083, 1359
BstNSI RCATGY 1 cut(s) 959
BstPAI GACNNNNGTC 1 cut(s) 777
BstPI GGTNACC 1 cut(s) 1433
BstSCI CCNGG 5 cut(s) 264, 555, 844, 1081, 1357
BstSFI CTRYAG 4 cut(s) 1019, 1227, 1776, 1796
BstSLI GKGCMC 2 cut(s) 424, 1378
BstUI CGCG 1 cut(s) 1371
BstV1I GCAGC 6 cut(s) 208, 985, 1084, 1213, 1543, 1621
BstV2I GAAGAC 2 cut(s) 773, 1495
BstX2I RGATCY 1 cut(s) 1306
BstYI RGATCY 1 cut(s) 1306
BstZ17I GTATAC 2 cut(s) 470, 498
Bsu36I CCTNAGG 1 cut(s) 546
BsuRI GGCC 4 cut(s) 300, 442, 529, 1398
BtsCI GGATG 2 cut(s) 451, 892
BtsI GCAGTG 1 cut(s) 1503
BtsIMutI CAGTG 2 cut(s) 75, 1503
BveI ACCTGC 2 cut(s) 663, 745
Cac8I GCNNGC 5 cut(s) 168, 660, 892, 1527, 1574
CfoI GCGC 1 cut(s) 1371
Cfr10I RCCGGY 1 cut(s) 300
Cfr13I GGNCC 3 cut(s) 734, 1396, 1676
CseI GACGC 1 cut(s) 840
CsiI ACCWGGT 1 cut(s) 1357
Csp6I GTAC 5 cut(s) 102, 706, 764, 842, 1037
CviAII CATG 2 cut(s) 956, 1235
CviQI GTAC 5 cut(s) 102, 706, 764, 842, 1037
DpnI GATC 4 cut(s) 717, 903, 1308, 1754
DpnII GATC 4 cut(s) 715, 901, 1306, 1752
DraIII CACNNNGTG 1 cut(s) 1424
DrdI GACNNNNNNGTC 1 cut(s) 1327
DseDI GACNNNNNNGTC 1 cut(s) 1327
EaeI YGGCCR 1 cut(s) 440
Eam1104I CTCTTC 3 cut(s) 147, 289, 1344
EarI CTCTTC 3 cut(s) 147, 289, 1344
Eco130I CCWWGG 1 cut(s) 458
Eco32I GATATC 1 cut(s) 321
Eco47I GGWCC 2 cut(s) 734, 1676
Eco57I CTGAAG 4 cut(s) 128, 210, 843, 1170
Eco81I CCTNAGG 1 cut(s) 546
Eco88I CYCGRG 1 cut(s) 289
Eco91I GGTNACC 1 cut(s) 1433
EcoNI CCTNNNNNAGG 1 cut(s) 1811
EcoO65I GGTNACC 1 cut(s) 1433
EcoRII CCWGG 5 cut(s) 264, 555, 844, 1081, 1357
EcoRV GATATC 1 cut(s) 321
EcoT14I CCWWGG 1 cut(s) 458
ErhI CCWWGG 1 cut(s) 458
FaeI CATG 2 cut(s) 959, 1238
FalI AAGNNNNNCTT 6 cut(s) 816, 848, 1116, 1148, 1293, 1325
FatI CATG 2 cut(s) 955, 1234
FauI CCCGC 2 cut(s) 1086, 1581
FbaI TGATCA 1 cut(s) 715
FblI GTMKAC 2 cut(s) 469, 497
Fnu4HI GCNGC 6 cut(s) 222, 999, 1098, 1227, 1557, 1635
FokI GGATG 2 cut(s) 458, 899
Fsp4HI GCNGC 6 cut(s) 222, 999, 1098, 1227, 1557, 1635
FspBI CTAG 6 cut(s) 167, 270, 333, 473, 512, 1703
GlaI GCGC 1 cut(s) 1370
GluI GCNGC 6 cut(s) 222, 999, 1098, 1227, 1557, 1635
GsaI CCCAGC 1 cut(s) 38
GsuI CTGGAG 3 cut(s) 774, 902, 1005
HaeIII GGCC 4 cut(s) 300, 442, 529, 1398
HapII CCGG 3 cut(s) 301, 443, 612
HgaI GACGC 1 cut(s) 840
HhaI GCGC 1 cut(s) 1371
Hin1II CATG 2 cut(s) 959, 1238
Hin6I GCGC 1 cut(s) 1369
HinP1I GCGC 1 cut(s) 1369
HincII GTYRAC 2 cut(s) 207, 562
HindII GTYRAC 2 cut(s) 207, 562
HindIII AAGCTT 3 cut(s) 349, 830, 1182
HinfI GANTC 6 cut(s) 515, 944, 1460, 1478, 1546, 1781
HpaII CCGG 3 cut(s) 301, 443, 612
HphI GGTGA 3 cut(s) 145, 1427, 1469
Hpy166II GTNNAC 7 cut(s) 207, 338, 470, 498, 562, 764, 1376
Hpy188I TCNGA 7 cut(s) 571, 652, 715, 856, 1012, 1189, 1596
Hpy188III TCNNGA 9 cut(s) 49, 281, 289, 291, 339, 612, 686, 770, 881
Hpy8I GTNNAC 7 cut(s) 207, 338, 470, 498, 562, 764, 1376
HpyAV CCTTC 5 cut(s) 118, 138, 336, 1211, 1807
HpyCH4III ACNGT 4 cut(s) 79, 196, 1006, 1324
HpyCH4IV ACGT 1 cut(s) 1667
HpyF10VI GCNNNNNNNGC 8 cut(s) 221, 227, 374, 419, 550, 601, 1514, 1535
HpySE526I ACGT 1 cut(s) 1667
Hsp92II CATG 2 cut(s) 959, 1238
HspAI GCGC 1 cut(s) 1369
Kpn2I TCCGGA 1 cut(s) 611
Ksp22I TGATCA 1 cut(s) 715
Kzo9I GATC 4 cut(s) 715, 901, 1306, 1752
LmnI GCTCC 2 cut(s) 558, 848
Lsp1109I GCAGC 6 cut(s) 208, 985, 1084, 1213, 1543, 1621
LweI GCATC 5 cut(s) 613, 877, 1165, 1621, 1799
MabI ACCWGGT 1 cut(s) 1357
MaeI CTAG 6 cut(s) 167, 270, 333, 473, 512, 1703
MaeII ACGT 1 cut(s) 1667
MaeIII GTNAC 4 cut(s) 977, 1142, 1361, 1433
MalI GATC 4 cut(s) 717, 903, 1308, 1754
MboI GATC 4 cut(s) 715, 901, 1306, 1752
MfeI CAATTG 1 cut(s) 247
MflI RGATCY 1 cut(s) 1306
MhlI GDGCHC 4 cut(s) 424, 555, 1378, 1805
MluCI AATT 5 cut(s) 198, 247, 917, 1044, 1597
MmeI TCCRAC 1 cut(s) 1523
MroI TCCGGA 1 cut(s) 611
MroXI GAANNNNTTC 1 cut(s) 1419
MseI TTAA 5 cut(s) 585, 1047, 1385, 1428, 1743
MslI CAYNNNNRTG 1 cut(s) 523
MspA1I CMGCKG 2 cut(s) 777, 1351
MspI CCGG 3 cut(s) 301, 443, 612
MspR9I CCNGG 5 cut(s) 266, 557, 846, 1083, 1359
MunI CAATTG 1 cut(s) 247
MvaI CCWGG 5 cut(s) 266, 557, 846, 1083, 1359
MvnI CGCG 1 cut(s) 1371
MwoI GCNNNNNNNGC 8 cut(s) 221, 227, 374, 419, 550, 601, 1514, 1535
NdeII GATC 4 cut(s) 715, 901, 1306, 1752
NheI GCTAGC 1 cut(s) 166
NlaIII CATG 2 cut(s) 959, 1238
NlaIV GGNNCC 3 cut(s) 126, 1356, 1397
NmuCI GTSAC 1 cut(s) 1433
NspI RCATGY 1 cut(s) 959
PaeR7I CTCGAG 1 cut(s) 289
PciI ACATGT 1 cut(s) 955
PcsI WCGNNNNNNNCGW 1 cut(s) 1159
PdmI GAANNNNTTC 1 cut(s) 1419
PfeI GAWTC 6 cut(s) 515, 944, 1460, 1478, 1546, 1781
PflFI GACNNNGTC 1 cut(s) 692
PkrI GCNGC 6 cut(s) 223, 1000, 1099, 1228, 1558, 1636
PscI ACATGT 1 cut(s) 955
PshAI GACNNNNGTC 1 cut(s) 777
PshBI ATTAAT 1 cut(s) 1047
Psp1406I AACGTT 1 cut(s) 1667
Psp6I CCWGG 5 cut(s) 264, 555, 844, 1081, 1357
PspEI GGTNACC 1 cut(s) 1433
PspFI CCCAGC 1 cut(s) 34
PspGI CCWGG 5 cut(s) 264, 555, 844, 1081, 1357
PspN4I GGNNCC 3 cut(s) 126, 1356, 1397
PspPI GGNCC 3 cut(s) 734, 1396, 1676
PstI CTGCAG 2 cut(s) 1023, 1231
PsuI RGATCY 1 cut(s) 1306
PsyI GACNNNGTC 1 cut(s) 692
PvuII CAGCTG 1 cut(s) 1351
RsaI GTAC 5 cut(s) 103, 707, 765, 843, 1038
RsaNI GTAC 5 cut(s) 102, 706, 764, 842, 1037
RseI CAYNNNNRTG 1 cut(s) 523
SaqAI TTAA 5 cut(s) 585, 1047, 1385, 1428, 1743
SatI GCNGC 6 cut(s) 222, 999, 1098, 1227, 1557, 1635
Sau3AI GATC 4 cut(s) 715, 901, 1306, 1752
Sau96I GGNCC 3 cut(s) 734, 1396, 1676
ScaI AGTACT 1 cut(s) 103
ScrFI CCNGG 5 cut(s) 266, 557, 846, 1083, 1359
SduI GDGCHC 4 cut(s) 424, 555, 1378, 1805
SexAI ACCWGGT 1 cut(s) 1357
SfaNI GCATC 5 cut(s) 613, 877, 1165, 1621, 1799
SfcI CTRYAG 4 cut(s) 1019, 1227, 1776, 1796
Sfr274I CTCGAG 1 cut(s) 289
SinI GGWCC 2 cut(s) 734, 1676
SlaI CTCGAG 1 cut(s) 289
SmiMI CAYNNNNRTG 1 cut(s) 523
SmlI CTYRAG 2 cut(s) 28, 289
SmoI CTYRAG 2 cut(s) 28, 289
Sse9I AATT 5 cut(s) 198, 247, 917, 1044, 1597
SsiI CCGC 6 cut(s) 401, 777, 1079, 1371, 1570, 1574
SspMI CTAG 6 cut(s) 167, 270, 333, 473, 512, 1703
StyD4I CCNGG 5 cut(s) 264, 555, 844, 1081, 1357
StyI CCWWGG 1 cut(s) 458
TaaI ACNGT 4 cut(s) 79, 196, 1006, 1324
TaiI ACGT 1 cut(s) 1670
TaqI TCGA 4 cut(s) 290, 621, 1118, 1656
TasI AATT 5 cut(s) 198, 247, 917, 1044, 1597
TatI WGTACW 3 cut(s) 101, 763, 1036
TfiI GAWTC 6 cut(s) 515, 944, 1460, 1478, 1546, 1781
Tru1I TTAA 5 cut(s) 585, 1047, 1385, 1428, 1743
Tru9I TTAA 5 cut(s) 585, 1047, 1385, 1428, 1743
TscAI CASTG 2 cut(s) 82, 1510
TseFI GTSAC 1 cut(s) 1433
TseI GCWGC 6 cut(s) 221, 998, 1097, 1226, 1556, 1634
Tsp45I GTSAC 1 cut(s) 1433
TspDTI ATGAA 3 cut(s) 743, 1428, 1642
TspGWI ACGGA 1 cut(s) 1774
TspRI CASTG 2 cut(s) 82, 1510
Tth111I GACNNNGTC 1 cut(s) 692
VneI GTGCAC 1 cut(s) 1374
VpaK11BI GGWCC 2 cut(s) 734, 1676
VspI ATTAAT 1 cut(s) 1047
XagI CCTNNNNNAGG 1 cut(s) 1811
XapI RAATTY 1 cut(s) 1597
XceI RCATGY 1 cut(s) 959
XhoI CTCGAG 1 cut(s) 289
XmiI GTMKAC 2 cut(s) 469, 497
XmnI GAANNNNTTC 1 cut(s) 1419
XspI CTAG 6 cut(s) 167, 270, 333, 473, 512, 1703
ZrmI AGTACT 1 cut(s) 103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.