Rmu_ssc0000228.1_g000001

Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic mitochondrial

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000228.1
OG0015162
Physical Location & Seq
Reverse (-)
8187 .. 13558
5372 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000228.1_g000001.1.cds

Sequence Viewer

Length: 1971 bp
atggatgaaaatttaatattcttcacctgtgatgagttagcccactacccacaaaaagataaaactgtaattatgtcaacgactgcatttgctgcttcagcaactcttttacggctcaattgtgaggcaaagcaccaggctaggttatttcctgatttctcgagaagaggccggtctaagatatctaagatatcgctatttgctagttcacgaaggaaaagctttcagtttgttgttgcttcaagtgcttctggggagaatggaggtgttgcggagatagaagctgaaagtgcccctcggtattattcttggccggatgagaagaaaccaagggtgtgtatactaggtggtgggtttggaggtttgtatactgctctaagactagaatcattggtatggcctgatgacaagaagcctcaggtgctcctggttgaccagtctgaacactttgtttttaagccaatgctgtatgagcttctgtccggagaagttgatgcgtgggagatagcacctcgcttctcagacctgctggcaaatacaaatgtgctgttttttcaagacaaggtcaaactcttgtacccctctgatcatttggtaatcaatggacctgcaaaatcaagtgctggaggaagtgtacttcttgagagtggtcttcttattgaatatgactggctggttctttctctgggtgctgaagctaagcttgatgttgtaccaggagcgtcagagtttgcattgccattctccactctggaggatgctcgcaaggttgatcttaggctaagagaattggagaggagaaagttcagcaaggaatctctaatacatgtggtggttgttggttgtggttacgctggagttgagttagctgccacagtttcggagagactgcaggacagaggtatagtacaagcaattaatgtcgaaaacacaatctgcccaaatgccccgcctggaaatagggaagctgcgactaaagttctctcatcgaggaaagttgaacttctgttgggttactttgttcgttgtattcgtcaagttgttgatgcgaaagcttcagaaaaaccgagaaagagcataggagttgaaggcattgctgcagaacatgattttgggaaatatattttggaacttcaacctactgaaaagggattacaaagtcaaactattgaagcagatcttgtcttatggactgttgggtctaaatctcttcttcctcagctggaacccagtaacaggcgcggtgcgcttcccttaaatggcaggggccaagcagaaacagatgaaacacttcgtgttaatggtcacccacgcatatttgcagttggtgattcttctgctctaagggaatcaaatggaaggcttcttcctgccactgcgcaggtcgcttttcagcaagcagactttgctggttggaatctgtgggctgcaataaacaaccgcccgcttttgcctttcaggtttcagaatttaggggaaatgattactttggggagaaatgatgctgccatttctccaagtttcatcgaggggttaacgttagatggtcctttgggtcataccgcgaggaaattagcctacttgattagattaccaactgatgagcataggcttaaagtagggatcagttggcttacaaaatctgctatagattctgttgcatctctacagagcaccctgacgaaggggacgaagcagctggcggatcgaggcggcgaagcaaccggcggagggaagctgcgaatcctgcgaagggaggctgccaatccggcgaagcaacctgcgaagcgaggctgcaaagccggtgaagtgaggcggcaaagaaggaatggttctgggcatggttcacatggtgataactccagacatagatcaactgatgatgcaccatcatccaaagatgtggatggagctaatgaaagcaatgctgaagtgagcaaatgcaagaaggtcaggctagtgtactactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3 Pyr_redox_2

Protein Analysis

656

Amino Acids

71.88

Weight (kDa)

9.02

Isoelectric Point (pI)

40.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08740
fragaria_vesca FvH4_5g00410
malus_domestica MD04G1081700.v1.1
prunus_persica Prupe.5G076700_v2.0.a1 Prupe.5G076700_v2.0.a1
pyrus_communis pycom04g07350
rosa_chinensis RchiOBHm_Chr7g0202111
rosa_laevigata RLG00000003625
rosa_multiflora Rmu_ssc0000228.1_g000001
rosa_roxburghii Rroxscaffold_3G00254850
rosa_rugosa Rorug07G0068000
rosa_samantha Rh7AG195500 Rh7BG196800 Rh7CG206600 Rh7DG202100
rosa_wichuraiana Rw7G017120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1198
Acc16I TGCGCA 1 cut(s) 1380
Acc36I ACCTGC 4 cut(s) 534, 616, 1372, 1789
AccI GTMKAC 2 cut(s) 340, 368
AccII CGCG 2 cut(s) 1242, 1565
AccIII TCCGGA 1 cut(s) 482
AclI AACGTT 1 cut(s) 1538
AclWI GGATC 2 cut(s) 1631, 1713
AcoI YGGCCR 1 cut(s) 311
AcsI RAATTY 2 cut(s) 10, 1468
AcuI CTGAAG 4 cut(s) 81, 714, 1041, 1950
AdeI CACNNNGTG 2 cut(s) 1295, 1853
AfaI GTAC 5 cut(s) 578, 636, 714, 909, 1964
AfiI CCNNNNNNNGG 5 cut(s) 1236, 1259, 1684, 1731, 1753
AflIII ACRYGT 1 cut(s) 826
AgsI TTSAA 7 cut(s) 243, 557, 662, 1001, 1088, 1136, 1172
AjnI CCWGG 4 cut(s) 135, 426, 715, 952
AjuI GAANNNNNNNTTGG 4 cut(s) 1095, 1109, 1127, 1141
Alw21I GWGCWC 2 cut(s) 426, 1676
Alw26I GTCTC 1 cut(s) 880
AlwI GGATC 2 cut(s) 1631, 1713
Ama87I CYCGRG 1 cut(s) 160
Aor13HI TCCGGA 1 cut(s) 482
AoxI GGCC 4 cut(s) 169, 311, 398, 1267
ApoI RAATTY 2 cut(s) 10, 1468
AseI ATTAAT 1 cut(s) 918
Asp700I GAANNNNTTC 1 cut(s) 1290
AspLEI GCGC 3 cut(s) 1242, 1249, 1381
AspS9I GGNCC 3 cut(s) 605, 1267, 1547
AsuHPI GGTGA 5 cut(s) 16, 1298, 1340, 1817, 1865
AvaI CYCGRG 1 cut(s) 160
AvaII GGWCC 2 cut(s) 605, 1547
AxyI CCTNAGG 1 cut(s) 417
BaeGI GKGCMC 1 cut(s) 295
BaeI ACNNNNGTAYC 2 cut(s) 560, 593
BbsI GAAGAC 1 cut(s) 644
Bbv12I GWGCWC 2 cut(s) 426, 1676
BbvCI CCTCAGC 1 cut(s) 1218
BccI CCATC 3 cut(s) 1538, 1897, 1901
BceAI ACGGC 1 cut(s) 128
BciT130I CCWGG 4 cut(s) 137, 428, 717, 954
BclI TGATCA 1 cut(s) 586
BcoDI GTCTC 1 cut(s) 880
BfaI CTAG 6 cut(s) 141, 204, 344, 383, 1958, 1969
BfmI CTRYAG 4 cut(s) 890, 1098, 1647, 1667
BfuAI ACCTGC 4 cut(s) 534, 616, 1372, 1789
BglI GCCNNNNNGGC 1 cut(s) 1769
BglII AGATCT 1 cut(s) 1177
BlpI GCTNAGC 1 cut(s) 699
Bme1390I CCNGG 4 cut(s) 137, 428, 717, 954
Bme18I GGWCC 2 cut(s) 605, 1547
BmeT110I CYCGRG 1 cut(s) 160
BmgT120I GGNCC 3 cut(s) 605, 1267, 1547
BmiI GGNNCC 2 cut(s) 1227, 1268
BmrFI CCNGG 4 cut(s) 137, 428, 717, 954
BmrI ACTGGG 1 cut(s) 1224
BmsI GCATC 6 cut(s) 484, 748, 1036, 1492, 1670, 1873
BmuI ACTGGG 1 cut(s) 1224
BpiI GAAGAC 1 cut(s) 644
BpmI CTGGAG 4 cut(s) 645, 773, 876, 1846
Bpu10I CCTNAGC 1 cut(s) 1218
Bpu1102I GCTNAGC 1 cut(s) 699
BpuEI CTTGAG 1 cut(s) 662
BsaJI CCNNGG 2 cut(s) 296, 329
BsaWI WCCGGW 1 cut(s) 482
BsaXI ACNNNNNCTCC 2 cut(s) 618, 648
Bsc4I CCNNNNNNNGG 5 cut(s) 1236, 1259, 1684, 1731, 1753
Bse118I RCCGGY 3 cut(s) 171, 1724, 1802
Bse1I ACTGG 3 cut(s) 436, 674, 1230
Bse21I CCTNAGG 1 cut(s) 417
Bse3DI GCAATG 3 cut(s) 734, 1092, 1930
BseAI TCCGGA 1 cut(s) 482
BseBI CCWGG 4 cut(s) 137, 428, 717, 954
BseDI CCNNGG 2 cut(s) 296, 329
BseGI GGATG 5 cut(s) 10, 322, 763, 1892, 1912
BseLI CCNNNNNNNGG 5 cut(s) 1236, 1259, 1684, 1731, 1753
BseMI GCAATG 3 cut(s) 734, 1092, 1930
BseMII CTCAG 3 cut(s) 431, 534, 1232
BseNI ACTGG 3 cut(s) 436, 674, 1230
BseRI GAGGAG 1 cut(s) 811
BseSI GKGCMC 1 cut(s) 295
Bsh1236I CGCG 2 cut(s) 1242, 1565
BshFI GGCC 4 cut(s) 171, 313, 400, 1269
BsiHKAI GWGCWC 2 cut(s) 426, 1676
BsiHKCI CYCGRG 1 cut(s) 160
BsiSI CCGG 6 cut(s) 172, 314, 483, 1725, 1769, 1803
BslFI GGGAC 1 cut(s) 1702
BslI CCNNNNNNNGG 5 cut(s) 1236, 1259, 1684, 1731, 1753
BsmAI GTCTC 1 cut(s) 880
BsmFI GGGAC 1 cut(s) 1702
BsnI GGCC 4 cut(s) 171, 313, 400, 1269
BsoBI CYCGRG 1 cut(s) 160
Bsp1286I GDGCHC 3 cut(s) 295, 426, 1676
Bsp13I TCCGGA 1 cut(s) 482
Bsp143I GATC 6 cut(s) 586, 772, 1177, 1623, 1705, 1871
Bsp1720I GCTNAGC 1 cut(s) 699
BspANI GGCC 4 cut(s) 171, 313, 400, 1269
BspCNI CTCAG 3 cut(s) 430, 533, 1231
BspEI TCCGGA 1 cut(s) 482
BspFNI CGCG 2 cut(s) 1242, 1565
BspLI GGNNCC 2 cut(s) 1227, 1268
BspMAI CTGCAG 2 cut(s) 894, 1102
BspMI ACCTGC 4 cut(s) 534, 616, 1372, 1789
BspPI GGATC 2 cut(s) 1631, 1713
BsrDI GCAATG 3 cut(s) 734, 1092, 1930
BsrFI RCCGGY 3 cut(s) 171, 1724, 1802
BsrI ACTGG 3 cut(s) 436, 674, 1230
BssAI RCCGGY 3 cut(s) 171, 1724, 1802
BssECI CCNNGG 2 cut(s) 296, 329
BssMI GATC 6 cut(s) 586, 772, 1177, 1623, 1705, 1871
BssNAI GTATAC 2 cut(s) 341, 369
BssT1I CCWWGG 1 cut(s) 329
Bst1107I GTATAC 2 cut(s) 341, 369
Bst2UI CCWGG 4 cut(s) 137, 428, 717, 954
Bst4CI ACNGT 3 cut(s) 67, 877, 1195
Bst6I CTCTTC 2 cut(s) 160, 1215
BstAPI GCANNNNNTGC 2 cut(s) 92, 1406
BstC8I GCNNGC 5 cut(s) 531, 763, 1398, 1445, 1701
BstEII GGTNACC 1 cut(s) 1304
BstENI CCTNNNNNAGG 1 cut(s) 1682
BstF5I GGATG 5 cut(s) 10, 322, 763, 1892, 1912
BstFNI CGCG 2 cut(s) 1242, 1565
BstHHI GCGC 3 cut(s) 1242, 1249, 1381
BstKTI GATC 6 cut(s) 589, 775, 1180, 1626, 1708, 1874
BstMAI GTCTC 1 cut(s) 880
BstMBI GATC 6 cut(s) 586, 772, 1177, 1623, 1705, 1871
BstNI CCWGG 4 cut(s) 137, 428, 717, 954
BstNSI RCATGY 1 cut(s) 830
BstPI GGTNACC 1 cut(s) 1304
BstSCI CCNGG 4 cut(s) 135, 426, 715, 952
BstSFI CTRYAG 4 cut(s) 890, 1098, 1647, 1667
BstSLI GKGCMC 1 cut(s) 295
BstUI CGCG 2 cut(s) 1242, 1565
BstV2I GAAGAC 1 cut(s) 644
BstX2I RGATCY 1 cut(s) 1177
BstXI CCANNNNNNTGG 1 cut(s) 1903
BstYI RGATCY 1 cut(s) 1177
BstZ17I GTATAC 2 cut(s) 341, 369
Bsu36I CCTNAGG 1 cut(s) 417
BsuRI GGCC 4 cut(s) 171, 313, 400, 1269
BtsCI GGATG 5 cut(s) 10, 322, 763, 1892, 1912
BtsI GCAGTG 1 cut(s) 1374
BtsIMutI CAGTG 1 cut(s) 1374
BveI ACCTGC 4 cut(s) 534, 616, 1372, 1789
Cac8I GCNNGC 5 cut(s) 531, 763, 1398, 1445, 1701
CfoI GCGC 3 cut(s) 1242, 1249, 1381
Cfr10I RCCGGY 3 cut(s) 171, 1724, 1802
Cfr13I GGNCC 3 cut(s) 605, 1267, 1547
CseI GACGC 1 cut(s) 711
Csp6I GTAC 5 cut(s) 577, 635, 713, 908, 1963
CviAII CATG 4 cut(s) 827, 1106, 1841, 1850
CviQI GTAC 5 cut(s) 577, 635, 713, 908, 1963
DpnI GATC 6 cut(s) 588, 774, 1179, 1625, 1707, 1873
DpnII GATC 6 cut(s) 586, 772, 1177, 1623, 1705, 1871
DraIII CACNNNGTG 2 cut(s) 1295, 1853
DrdI GACNNNNNNGTC 1 cut(s) 1198
DseDI GACNNNNNNGTC 1 cut(s) 1198
EaeI YGGCCR 1 cut(s) 311
Eam1104I CTCTTC 2 cut(s) 160, 1215
EarI CTCTTC 2 cut(s) 160, 1215
EciI GGCGGA 2 cut(s) 1718, 1743
Eco130I CCWWGG 1 cut(s) 329
Eco32I GATATC 2 cut(s) 183, 192
Eco47I GGWCC 2 cut(s) 605, 1547
Eco57I CTGAAG 4 cut(s) 81, 714, 1041, 1950
Eco81I CCTNAGG 1 cut(s) 417
Eco88I CYCGRG 1 cut(s) 160
Eco91I GGTNACC 1 cut(s) 1304
EcoNI CCTNNNNNAGG 1 cut(s) 1682
EcoO65I GGTNACC 1 cut(s) 1304
EcoRII CCWGG 4 cut(s) 135, 426, 715, 952
EcoRV GATATC 2 cut(s) 183, 192
EcoT14I CCWWGG 1 cut(s) 329
ErhI CCWWGG 1 cut(s) 329
FaeI CATG 4 cut(s) 830, 1109, 1844, 1853
FalI AAGNNNNNCTT 6 cut(s) 687, 719, 987, 1019, 1164, 1196
FaqI GGGAC 1 cut(s) 1702
FatI CATG 4 cut(s) 826, 1105, 1840, 1849
FauI CCCGC 2 cut(s) 957, 1452
FbaI TGATCA 1 cut(s) 586
FblI GTMKAC 2 cut(s) 340, 368
FokI GGATG 5 cut(s) 17, 329, 770, 1879, 1919
FspBI CTAG 6 cut(s) 141, 204, 344, 383, 1958, 1969
FspI TGCGCA 1 cut(s) 1380
GlaI GCGC 3 cut(s) 1241, 1248, 1380
GsuI CTGGAG 4 cut(s) 645, 773, 876, 1846
HaeIII GGCC 4 cut(s) 171, 313, 400, 1269
HapII CCGG 6 cut(s) 172, 314, 483, 1725, 1769, 1803
HgaI GACGC 1 cut(s) 711
HhaI GCGC 3 cut(s) 1242, 1249, 1381
Hin1II CATG 4 cut(s) 830, 1109, 1844, 1853
Hin6I GCGC 3 cut(s) 1240, 1247, 1379
HinP1I GCGC 3 cut(s) 1240, 1247, 1379
HincII GTYRAC 3 cut(s) 78, 433, 1536
HindII GTYRAC 3 cut(s) 78, 433, 1536
HindIII AAGCTT 3 cut(s) 220, 701, 1053
HinfI GANTC 7 cut(s) 386, 815, 1331, 1349, 1417, 1652, 1743
HpaI GTTAAC 1 cut(s) 1536
HpaII CCGG 6 cut(s) 172, 314, 483, 1725, 1769, 1803
HphI GGTGA 5 cut(s) 16, 1298, 1340, 1817, 1865
Hpy166II GTNNAC 9 cut(s) 78, 209, 341, 369, 433, 635, 1536, 1847, 1963
Hpy188I TCNGA 7 cut(s) 442, 523, 586, 727, 883, 1060, 1467
Hpy188III TCNNGA 9 cut(s) 152, 160, 162, 210, 483, 557, 641, 752, 1863
Hpy8I GTNNAC 9 cut(s) 78, 209, 341, 369, 433, 635, 1536, 1847, 1963
HpyAV CCTTC 7 cut(s) 207, 1082, 1353, 1678, 1746, 1818, 1942
HpyCH4III ACNGT 3 cut(s) 67, 877, 1195
HpyCH4IV ACGT 1 cut(s) 1538
HpySE526I ACGT 1 cut(s) 1538
Hsp92II CATG 4 cut(s) 830, 1109, 1844, 1853
HspAI GCGC 3 cut(s) 1240, 1247, 1379
Kpn2I TCCGGA 1 cut(s) 482
Ksp22I TGATCA 1 cut(s) 586
KspAI GTTAAC 1 cut(s) 1536
Kzo9I GATC 6 cut(s) 586, 772, 1177, 1623, 1705, 1871
LmnI GCTCC 3 cut(s) 429, 719, 1910
LweI GCATC 6 cut(s) 484, 748, 1036, 1492, 1670, 1873
MaeI CTAG 6 cut(s) 141, 204, 344, 383, 1958, 1969
MaeII ACGT 1 cut(s) 1538
MaeIII GTNAC 4 cut(s) 848, 1013, 1232, 1304
MalI GATC 6 cut(s) 588, 774, 1179, 1625, 1707, 1873
MboI GATC 6 cut(s) 586, 772, 1177, 1623, 1705, 1871
MboII GAAGA 8 cut(s) 13, 177, 334, 644, 1202, 1205, 1326, 1358
MfeI CAATTG 1 cut(s) 118
MflI RGATCY 1 cut(s) 1177
MhlI GDGCHC 3 cut(s) 295, 426, 1676
MluCI AATT 7 cut(s) 10, 69, 118, 788, 915, 1468, 1571
MmeI TCCRAC 1 cut(s) 1394
MroI TCCGGA 1 cut(s) 482
MroXI GAANNNNTTC 1 cut(s) 1290
MseI TTAA 7 cut(s) 14, 456, 918, 1256, 1299, 1535, 1614
MslI CAYNNNNRTG 1 cut(s) 394
MspA1I CMGCKG 2 cut(s) 1222, 1699
MspI CCGG 6 cut(s) 172, 314, 483, 1725, 1769, 1803
MspR9I CCNGG 4 cut(s) 137, 428, 717, 954
MunI CAATTG 1 cut(s) 118
MvaI CCWGG 4 cut(s) 137, 428, 717, 954
MvnI CGCG 2 cut(s) 1242, 1565
NdeII GATC 6 cut(s) 586, 772, 1177, 1623, 1705, 1871
NlaIII CATG 4 cut(s) 830, 1109, 1844, 1853
NlaIV GGNNCC 2 cut(s) 1227, 1268
NmuCI GTSAC 1 cut(s) 1304
NsbI TGCGCA 1 cut(s) 1380
NspI RCATGY 1 cut(s) 830
PaeR7I CTCGAG 1 cut(s) 160
PciI ACATGT 1 cut(s) 826
PcsI WCGNNNNNNNCGW 2 cut(s) 1030, 1688
PdmI GAANNNNTTC 1 cut(s) 1290
PfeI GAWTC 7 cut(s) 386, 815, 1331, 1349, 1417, 1652, 1743
PflFI GACNNNGTC 1 cut(s) 563
PscI ACATGT 1 cut(s) 826
PshBI ATTAAT 1 cut(s) 918
Psp1406I AACGTT 1 cut(s) 1538
Psp6I CCWGG 4 cut(s) 135, 426, 715, 952
PspEI GGTNACC 1 cut(s) 1304
PspGI CCWGG 4 cut(s) 135, 426, 715, 952
PspN4I GGNNCC 2 cut(s) 1227, 1268
PspPI GGNCC 3 cut(s) 605, 1267, 1547
PstI CTGCAG 2 cut(s) 894, 1102
PsuI RGATCY 1 cut(s) 1177
PsyI GACNNNGTC 1 cut(s) 563
PvuII CAGCTG 2 cut(s) 1222, 1699
RsaI GTAC 5 cut(s) 578, 636, 714, 909, 1964
RsaNI GTAC 5 cut(s) 577, 635, 713, 908, 1963
RseI CAYNNNNRTG 1 cut(s) 394
SaqAI TTAA 7 cut(s) 14, 456, 918, 1256, 1299, 1535, 1614
Sau3AI GATC 6 cut(s) 586, 772, 1177, 1623, 1705, 1871
Sau96I GGNCC 3 cut(s) 605, 1267, 1547
ScrFI CCNGG 4 cut(s) 137, 428, 717, 954
SduI GDGCHC 3 cut(s) 295, 426, 1676
SfaNI GCATC 6 cut(s) 484, 748, 1036, 1492, 1670, 1873
SfcI CTRYAG 4 cut(s) 890, 1098, 1647, 1667
Sfr274I CTCGAG 1 cut(s) 160
SinI GGWCC 2 cut(s) 605, 1547
SlaI CTCGAG 1 cut(s) 160
SmiMI CAYNNNNRTG 1 cut(s) 394
SmlI CTYRAG 2 cut(s) 160, 641
SmoI CTYRAG 2 cut(s) 160, 641
Sse9I AATT 7 cut(s) 10, 69, 118, 788, 915, 1468, 1571
SspI AATATT 1 cut(s) 18
SspMI CTAG 6 cut(s) 141, 204, 344, 383, 1958, 1969
StyD4I CCNGG 4 cut(s) 135, 426, 715, 952
StyI CCWWGG 1 cut(s) 329
TaaI ACNGT 3 cut(s) 67, 877, 1195
TaiI ACGT 1 cut(s) 1541
TaqI TCGA 5 cut(s) 161, 924, 989, 1527, 1708
TasI AATT 7 cut(s) 10, 69, 118, 788, 915, 1468, 1571
TatI WGTACW 3 cut(s) 634, 907, 1962
TauI GCSGC 2 cut(s) 1716, 1819
TfiI GAWTC 7 cut(s) 386, 815, 1331, 1349, 1417, 1652, 1743
Tru1I TTAA 7 cut(s) 14, 456, 918, 1256, 1299, 1535, 1614
Tru9I TTAA 7 cut(s) 14, 456, 918, 1256, 1299, 1535, 1614
TscAI CASTG 1 cut(s) 1381
TseFI GTSAC 1 cut(s) 1304
Tsp45I GTSAC 1 cut(s) 1304
TspDTI ATGAA 4 cut(s) 21, 1299, 1513, 1932
TspRI CASTG 1 cut(s) 1381
Tth111I GACNNNGTC 1 cut(s) 563
VpaK11BI GGWCC 2 cut(s) 605, 1547
VspI ATTAAT 1 cut(s) 918
XagI CCTNNNNNAGG 1 cut(s) 1682
XapI RAATTY 2 cut(s) 10, 1468
XceI RCATGY 1 cut(s) 830
XhoI CTCGAG 1 cut(s) 160
XmiI GTMKAC 2 cut(s) 340, 368
XmnI GAANNNNTTC 1 cut(s) 1290
XspI CTAG 6 cut(s) 141, 204, 344, 383, 1958, 1969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.