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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13950 AT5G13950 AT5G13950 AT5G13950 |
| fragaria_vesca | FvH4_6g54340 FvH4_6g54340 FvH4_6g54340 FvH4_6g54340 |
| malus_domestica | MD09G1002200.v1.1 MD17G1006400.v1.1 |
| prunus_persica | Prupe.3G314000_v2.0.a1 Prupe.3G314000_v2.0.a1 Prupe.3G314000_v2.0.a1 |
| pyrus_communis | pycom111g00170 pycom17g00200 |
| rosa_chinensis | RchiOBHm_Chr2g0176561 |
| rosa_laevigata | RLG00000022425 |
| rosa_roxburghii | Rroxscaffold_2G00076300 |
| rosa_rugosa | Rorug02G0596200 |
| rosa_samantha | Rh2AG674100 Rh2BG685300 Rh2CG648300 Rh2DG699200 |
| rosa_wichuraiana | Rw2G055290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1536 |
| Acc36I | ACCTGC | 1 cut(s) | 1536 |
| Acc65I | GGTACC | 1 cut(s) | 50 |
| AccB1I | GGYRCC | 2 cut(s) | 50, 1327 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1481, 2038 |
| AccBSI | CCGCTC | 1 cut(s) | 2700 |
| AciI | CCGC | 8 cut(s) | 25, 269, 361, 2290, 2331, 2684, 2700, 2758 |
| AclWI | GGATC | 4 cut(s) | 153, 614, 2190, 2447 |
| AcoI | YGGCCR | 3 cut(s) | 2029, 2242, 2291 |
| AcsI | RAATTY | 5 cut(s) | 212, 424, 547, 1350, 1362 |
| AcuI | CTGAAG | 4 cut(s) | 1220, 1635, 1893, 1947 |
| AcyI | GRCGYC | 1 cut(s) | 2235 |
| AfaI | GTAC | 5 cut(s) | 52, 402, 1450, 2314, 2419 |
| AfeI | AGCGCT | 1 cut(s) | 812 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 60, 1390, 1481, 1799, 1847, 2038 |
| AflII | CTTAAG | 1 cut(s) | 938 |
| AflIII | ACRYGT | 2 cut(s) | 882, 927 |
| AgsI | TTSAA | 9 cut(s) | 140, 595, 1052, 1280, 1303, 1389, 1577, 2592, 2646 |
| AjnI | CCWGG | 6 cut(s) | 693, 725, 1908, 2031, 2178, 2211 |
| Alw21I | GWGCWC | 3 cut(s) | 1012, 1693, 2351 |
| Alw26I | GTCTC | 4 cut(s) | 172, 1617, 2218, 2777 |
| Alw44I | GTGCAC | 1 cut(s) | 1689 |
| AlwI | GGATC | 4 cut(s) | 153, 614, 2190, 2447 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 700, 2341 |
| Ama87I | CYCGRG | 2 cut(s) | 60, 712 |
| Aor51HI | AGCGCT | 1 cut(s) | 812 |
| AoxI | GGCC | 4 cut(s) | 2029, 2242, 2291, 2354 |
| ApaLI | GTGCAC | 1 cut(s) | 1689 |
| ApoI | RAATTY | 5 cut(s) | 212, 424, 547, 1350, 1362 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 442, 2509 |
| Asp718I | GGTACC | 1 cut(s) | 50 |
| AspA2I | CCTAGG | 1 cut(s) | 233 |
| AspLEI | GCGC | 2 cut(s) | 813, 2559 |
| AspS9I | GGNCC | 4 cut(s) | 804, 2215, 2354, 2442 |
| AsuC2I | CCSGG | 2 cut(s) | 2353, 2440 |
| AsuHPI | GGTGA | 8 cut(s) | 90, 134, 356, 1331, 1349, 1421, 1464, 1889 |
| AvaI | CYCGRG | 2 cut(s) | 60, 712 |
| AvaII | GGWCC | 3 cut(s) | 804, 2215, 2442 |
| AvrII | CCTAGG | 1 cut(s) | 233 |
| AxyI | CCTNAGG | 2 cut(s) | 375, 518 |
| BaeGI | GKGCMC | 1 cut(s) | 1693 |
| BalI | TGGCCA | 2 cut(s) | 2031, 2244 |
| BanI | GGYRCC | 2 cut(s) | 50, 1327 |
| BanII | GRGCYC | 1 cut(s) | 1644 |
| BauI | CACGAG | 1 cut(s) | 1499 |
| Bbv12I | GWGCWC | 3 cut(s) | 1012, 1693, 2351 |
| BceAI | ACGGC | 1 cut(s) | 1809 |
| BciT130I | CCWGG | 6 cut(s) | 695, 727, 1910, 2033, 2180, 2213 |
| BciVI | GTATCC | 1 cut(s) | 2808 |
| BclI | TGATCA | 2 cut(s) | 10, 124 |
| BcnI | CCSGG | 2 cut(s) | 2353, 2440 |
| BcoDI | GTCTC | 4 cut(s) | 172, 1617, 2218, 2777 |
| BfaI | CTAG | 4 cut(s) | 234, 1442, 1700, 2786 |
| BfmI | CTRYAG | 5 cut(s) | 1128, 1154, 1248, 1262, 2012 |
| BfoI | RGCGCY | 1 cut(s) | 814 |
| BfrI | CTTAAG | 1 cut(s) | 938 |
| BfuAI | ACCTGC | 1 cut(s) | 1536 |
| BfuI | GTATCC | 1 cut(s) | 2808 |
| BglII | AGATCT | 3 cut(s) | 1120, 1654, 2567 |
| BlnI | CCTAGG | 1 cut(s) | 233 |
| Bme1390I | CCNGG | 8 cut(s) | 695, 727, 1910, 2033, 2180, 2213, 2353, 2440 |
| Bme18I | GGWCC | 3 cut(s) | 804, 2215, 2442 |
| BmeT110I | CYCGRG | 2 cut(s) | 60, 712 |
| BmgT120I | GGNCC | 4 cut(s) | 804, 2215, 2354, 2442 |
| BmiI | GGNNCC | 4 cut(s) | 52, 1329, 2303, 2443 |
| BmrFI | CCNGG | 8 cut(s) | 695, 727, 1910, 2033, 2180, 2213, 2353, 2440 |
| BmrI | ACTGGG | 1 cut(s) | 1836 |
| BmsI | GCATC | 7 cut(s) | 211, 967, 1117, 1654, 2204, 2274, 2715 |
| BmuI | ACTGGG | 1 cut(s) | 1836 |
| BpuEI | CTTGAG | 2 cut(s) | 2634, 2716 |
| BpuMI | CCSGG | 2 cut(s) | 2353, 2440 |
| Bsa29I | ATCGAT | 1 cut(s) | 1035 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1668 |
| BsaHI | GRCGYC | 1 cut(s) | 2235 |
| BsaI | GGTCTC | 1 cut(s) | 2777 |
| BsaWI | WCCGGW | 2 cut(s) | 119, 473 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 372, 402, 1053, 1083 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 60, 1390, 1481, 1799, 1847, 2038 |
| Bse1I | ACTGG | 6 cut(s) | 54, 283, 1106, 1793, 1842, 2303 |
| Bse21I | CCTNAGG | 2 cut(s) | 375, 518 |
| Bse3DI | GCAATG | 2 cut(s) | 407, 676 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1668 |
| BseBI | CCWGG | 6 cut(s) | 695, 727, 1910, 2033, 2180, 2213 |
| BseCI | ATCGAT | 1 cut(s) | 1035 |
| BseGI | GGATG | 8 cut(s) | 33, 484, 1227, 1867, 2065, 2420, 2561, 2751 |
| BseJI | GATNNNNATC | 1 cut(s) | 1668 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 60, 1390, 1481, 1799, 1847, 2038 |
| BseMI | GCAATG | 2 cut(s) | 407, 676 |
| BseMII | CTCAG | 5 cut(s) | 366, 509, 2046, 2330, 2479 |
| BseNI | ACTGG | 6 cut(s) | 54, 283, 1106, 1793, 1842, 2303 |
| BseRI | GAGGAG | 3 cut(s) | 31, 1447, 2108 |
| BseSI | GKGCMC | 1 cut(s) | 1693 |
| BseYI | CCCAGC | 1 cut(s) | 1541 |
| BshFI | GGCC | 4 cut(s) | 2031, 2244, 2293, 2356 |
| BshNI | GGYRCC | 2 cut(s) | 50, 1327 |
| BshVI | ATCGAT | 1 cut(s) | 1035 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1012, 1693, 2351 |
| BsiHKCI | CYCGRG | 2 cut(s) | 60, 712 |
| BsiSI | CCGG | 4 cut(s) | 120, 474, 2352, 2439 |
| BslFI | GGGAC | 3 cut(s) | 251, 2066, 2455 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 60, 1390, 1481, 1799, 1847, 2038 |
| BsmAI | GTCTC | 4 cut(s) | 172, 1617, 2218, 2777 |
| BsmFI | GGGAC | 3 cut(s) | 251, 2066, 2455 |
| BsmI | GAATGC | 6 cut(s) | 97, 518, 900, 996, 1711, 2631 |
| BsnI | GGCC | 4 cut(s) | 2031, 2244, 2293, 2356 |
| Bso31I | GGTCTC | 1 cut(s) | 2777 |
| BsoBI | CYCGRG | 2 cut(s) | 60, 712 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1012, 1644, 1693, 2351 |
| Bsp1407I | TGTACA | 2 cut(s) | 400, 2417 |
| BspACI | CCGC | 8 cut(s) | 25, 269, 361, 2290, 2331, 2684, 2700, 2758 |
| BspANI | GGCC | 4 cut(s) | 2031, 2244, 2293, 2356 |
| BspCNI | CTCAG | 5 cut(s) | 367, 510, 2047, 2329, 2478 |
| BspDI | ATCGAT | 1 cut(s) | 1035 |
| BspLI | GGNNCC | 4 cut(s) | 52, 1329, 2303, 2443 |
| BspMAI | CTGCAG | 3 cut(s) | 1132, 1252, 1266 |
| BspMI | ACCTGC | 1 cut(s) | 1536 |
| BspPI | GGATC | 4 cut(s) | 153, 614, 2190, 2447 |
| BspT107I | GGYRCC | 2 cut(s) | 50, 1327 |
| BspTI | CTTAAG | 1 cut(s) | 938 |
| BspTNI | GGTCTC | 1 cut(s) | 2777 |
| BsrBI | CCGCTC | 1 cut(s) | 2700 |
| BsrDI | GCAATG | 2 cut(s) | 407, 676 |
| BsrGI | TGTACA | 2 cut(s) | 400, 2417 |
| BsrI | ACTGG | 6 cut(s) | 54, 283, 1106, 1793, 1842, 2303 |
| BssNI | GRCGYC | 1 cut(s) | 2235 |
| BssSI | CACGAG | 1 cut(s) | 1499 |
| BssT1I | CCWWGG | 5 cut(s) | 233, 1747, 2245, 2425, 2801 |
| Bst2BI | CACGAG | 1 cut(s) | 1499 |
| Bst2UI | CCWGG | 6 cut(s) | 695, 727, 1910, 2033, 2180, 2213 |
| Bst6I | CTCTTC | 2 cut(s) | 1506, 2076 |
| BstACI | GRCGYC | 1 cut(s) | 2235 |
| BstAFI | CTTAAG | 1 cut(s) | 938 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1136, 2201 |
| BstAUI | TGTACA | 2 cut(s) | 400, 2417 |
| BstC8I | GCNNGC | 3 cut(s) | 1439, 1682, 2676 |
| BstDEI | CTNAG | 7 cut(s) | 171, 191, 375, 518, 2055, 2316, 2465 |
| BstDSI | CCRYGG | 1 cut(s) | 2272 |
| BstEII | GGTNACC | 1 cut(s) | 1409 |
| BstF5I | GGATG | 8 cut(s) | 33, 484, 1227, 1867, 2065, 2420, 2561, 2751 |
| BstH2I | RGCGCY | 1 cut(s) | 814 |
| BstHHI | GCGC | 2 cut(s) | 813, 2559 |
| BstMAI | GTCTC | 4 cut(s) | 172, 1617, 2218, 2777 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1136, 2201, 2250, 2480 |
| BstNI | CCWGG | 6 cut(s) | 695, 727, 1910, 2033, 2180, 2213 |
| BstNSI | RCATGY | 4 cut(s) | 931, 1924, 2257, 2392 |
| BstPI | GGTNACC | 1 cut(s) | 1409 |
| BstSCI | CCNGG | 8 cut(s) | 693, 725, 1908, 2031, 2178, 2211, 2351, 2438 |
| BstSFI | CTRYAG | 5 cut(s) | 1128, 1154, 1248, 1262, 2012 |
| BstSLI | GKGCMC | 1 cut(s) | 1693 |
| BstX2I | RGATCY | 5 cut(s) | 619, 1120, 1654, 2452, 2567 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2768, 2808 |
| BstYI | RGATCY | 5 cut(s) | 619, 1120, 1654, 2452, 2567 |
| Bsu15I | ATCGAT | 1 cut(s) | 1035 |
| Bsu36I | CCTNAGG | 2 cut(s) | 375, 518 |
| BsuI | GTATCC | 1 cut(s) | 2808 |
| BsuRI | GGCC | 4 cut(s) | 2031, 2244, 2293, 2356 |
| BsuTUI | ATCGAT | 1 cut(s) | 1035 |
| BtgI | CCRYGG | 1 cut(s) | 2272 |
| BtsCI | GGATG | 8 cut(s) | 33, 484, 1227, 1867, 2065, 2420, 2561, 2751 |
| BtsIMutI | CAGTG | 6 cut(s) | 40, 1099, 1684, 1800, 1849, 2052 |
| BveI | ACCTGC | 1 cut(s) | 1536 |
| Cac8I | GCNNGC | 3 cut(s) | 1439, 1682, 2676 |
| CaiI | CAGNNNCTG | 2 cut(s) | 700, 2341 |
| CfoI | GCGC | 2 cut(s) | 813, 2559 |
| Cfr13I | GGNCC | 4 cut(s) | 804, 2215, 2354, 2442 |
| ClaI | ATCGAT | 1 cut(s) | 1035 |
| CseI | GACGC | 2 cut(s) | 2243, 2598 |
| Csp6I | GTAC | 5 cut(s) | 51, 401, 1449, 2313, 2418 |
| CviQI | GTAC | 5 cut(s) | 51, 401, 1449, 2313, 2418 |
| DdeI | CTNAG | 7 cut(s) | 171, 191, 375, 518, 2055, 2316, 2465 |
| EaeI | YGGCCR | 3 cut(s) | 2029, 2242, 2291 |
| Eam1104I | CTCTTC | 2 cut(s) | 1506, 2076 |
| EarI | CTCTTC | 2 cut(s) | 1506, 2076 |
| Eco130I | CCWWGG | 5 cut(s) | 233, 1747, 2245, 2425, 2801 |
| Eco24I | GRGCYC | 1 cut(s) | 1644 |
| Eco31I | GGTCTC | 1 cut(s) | 2777 |
| Eco47I | GGWCC | 3 cut(s) | 804, 2215, 2442 |
| Eco47III | AGCGCT | 1 cut(s) | 812 |
| Eco57I | CTGAAG | 4 cut(s) | 1220, 1635, 1893, 1947 |
| Eco81I | CCTNAGG | 2 cut(s) | 375, 518 |
| Eco88I | CYCGRG | 2 cut(s) | 60, 712 |
| Eco91I | GGTNACC | 1 cut(s) | 1409 |
| EcoO65I | GGTNACC | 1 cut(s) | 1409 |
| EcoRII | CCWGG | 6 cut(s) | 693, 725, 1908, 2031, 2178, 2211 |
| EcoT14I | CCWWGG | 5 cut(s) | 233, 1747, 2245, 2425, 2801 |
| EcoT22I | ATGCAT | 1 cut(s) | 2206 |
| EcoT38I | GRGCYC | 1 cut(s) | 1644 |
| ErhI | CCWWGG | 5 cut(s) | 233, 1747, 2245, 2425, 2801 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 396, 428, 2070, 2102 |
| FaqI | GGGAC | 3 cut(s) | 251, 2066, 2455 |
| FauI | CCCGC | 2 cut(s) | 276, 2691 |
| FauNDI | CATATG | 1 cut(s) | 1135 |
| FbaI | TGATCA | 2 cut(s) | 10, 124 |
| FokI | GGATG | 8 cut(s) | 40, 471, 1234, 1854, 2052, 2427, 2548, 2758 |
| FriOI | GRGCYC | 1 cut(s) | 1644 |
| FspBI | CTAG | 4 cut(s) | 234, 1442, 1700, 2786 |
| GlaI | GCGC | 2 cut(s) | 812, 2558 |
| GsaI | CCCAGC | 1 cut(s) | 1545 |
| HaeII | RGCGCY | 1 cut(s) | 814 |
| HaeIII | GGCC | 4 cut(s) | 2031, 2244, 2293, 2356 |
| HapII | CCGG | 4 cut(s) | 120, 474, 2352, 2439 |
| HgaI | GACGC | 2 cut(s) | 2243, 2598 |
| HhaI | GCGC | 2 cut(s) | 813, 2559 |
| Hin1I | GRCGYC | 1 cut(s) | 2235 |
| Hin6I | GCGC | 2 cut(s) | 811, 2557 |
| HinP1I | GCGC | 2 cut(s) | 811, 2557 |
| HincII | GTYRAC | 2 cut(s) | 2233, 2552 |
| HindII | GTYRAC | 2 cut(s) | 2233, 2552 |
| HindIII | AAGCTT | 2 cut(s) | 1830, 2521 |
| HpaII | CCGG | 4 cut(s) | 120, 474, 2352, 2439 |
| HphI | GGTGA | 8 cut(s) | 90, 134, 356, 1331, 1349, 1421, 1464, 1889 |
| Hpy166II | GTNNAC | 6 cut(s) | 682, 853, 1451, 1691, 2233, 2552 |
| Hpy8I | GTNNAC | 6 cut(s) | 682, 853, 1451, 1691, 2233, 2552 |
| HpyCH4IV | ACGT | 2 cut(s) | 855, 882 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1136, 2201, 2250, 2480 |
| HpyF3I | CTNAG | 7 cut(s) | 171, 191, 375, 518, 2055, 2316, 2465 |
| HpySE526I | ACGT | 2 cut(s) | 855, 882 |
| Hsp92I | GRCGYC | 1 cut(s) | 2235 |
| HspAI | GCGC | 2 cut(s) | 811, 2557 |
| KpnI | GGTACC | 1 cut(s) | 54 |
| Ksp22I | TGATCA | 2 cut(s) | 10, 124 |
| LmnI | GCTCC | 5 cut(s) | 64, 391, 476, 2095, 2385 |
| LweI | GCATC | 7 cut(s) | 211, 967, 1117, 1654, 2204, 2274, 2715 |
| MaeI | CTAG | 4 cut(s) | 234, 1442, 1700, 2786 |
| MaeII | ACGT | 2 cut(s) | 855, 882 |
| MaeIII | GTNAC | 7 cut(s) | 967, 1028, 1158, 1409, 1550, 2326, 2615 |
| MbiI | CCGCTC | 1 cut(s) | 2700 |
| MfeI | CAATTG | 1 cut(s) | 2308 |
| MflI | RGATCY | 5 cut(s) | 619, 1120, 1654, 2452, 2567 |
| MhlI | GDGCHC | 4 cut(s) | 1012, 1644, 1693, 2351 |
| MlsI | TGGCCA | 2 cut(s) | 2031, 2244 |
| MluNI | TGGCCA | 2 cut(s) | 2031, 2244 |
| MmeI | TCCRAC | 3 cut(s) | 267, 279, 2392 |
| Mox20I | TGGCCA | 2 cut(s) | 2031, 2244 |
| Mph1103I | ATGCAT | 1 cut(s) | 2206 |
| MroXI | GAANNNNTTC | 2 cut(s) | 442, 2509 |
| MscI | TGGCCA | 2 cut(s) | 2031, 2244 |
| MseI | TTAA | 7 cut(s) | 939, 1014, 1116, 1560, 2025, 2088, 2363 |
| MslI | CAYNNNNRTG | 3 cut(s) | 207, 256, 974 |
| Msp20I | TGGCCA | 2 cut(s) | 2031, 2244 |
| MspA1I | CMGCKG | 3 cut(s) | 8, 464, 2290 |
| MspCI | CTTAAG | 1 cut(s) | 938 |
| MspI | CCGG | 4 cut(s) | 120, 474, 2352, 2439 |
| MspR9I | CCNGG | 8 cut(s) | 695, 727, 1910, 2033, 2180, 2213, 2353, 2440 |
| MunI | CAATTG | 1 cut(s) | 2308 |
| Mva1269I | GAATGC | 6 cut(s) | 97, 518, 900, 996, 1711, 2631 |
| MvaI | CCWGG | 6 cut(s) | 695, 727, 1910, 2033, 2180, 2213 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1136, 2201, 2250, 2480 |
| NciI | CCSGG | 2 cut(s) | 2353, 2440 |
| NdeI | CATATG | 1 cut(s) | 1135 |
| NlaIV | GGNNCC | 4 cut(s) | 52, 1329, 2303, 2443 |
| NmuCI | GTSAC | 3 cut(s) | 967, 1409, 1550 |
| NsiI | ATGCAT | 1 cut(s) | 2206 |
| NspI | RCATGY | 4 cut(s) | 931, 1924, 2257, 2392 |
| PaqCI | CACCTGC | 1 cut(s) | 1536 |
| PciI | ACATGT | 1 cut(s) | 927 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1032 |
| PctI | GAATGC | 6 cut(s) | 97, 518, 900, 996, 1711, 2631 |
| PdmI | GAANNNNTTC | 2 cut(s) | 442, 2509 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1481, 2038 |
| PfoI | TCCNGGA | 2 cut(s) | 725, 2178 |
| PscI | ACATGT | 1 cut(s) | 927 |
| Psp6I | CCWGG | 6 cut(s) | 693, 725, 1908, 2031, 2178, 2211 |
| PspEI | GGTNACC | 1 cut(s) | 1409 |
| PspFI | CCCAGC | 1 cut(s) | 1541 |
| PspGI | CCWGG | 6 cut(s) | 693, 725, 1908, 2031, 2178, 2211 |
| PspN4I | GGNNCC | 4 cut(s) | 52, 1329, 2303, 2443 |
| PspPI | GGNCC | 4 cut(s) | 804, 2215, 2354, 2442 |
| PstI | CTGCAG | 3 cut(s) | 1132, 1252, 1266 |
| PstNI | CAGNNNCTG | 2 cut(s) | 700, 2341 |
| PsuI | RGATCY | 5 cut(s) | 619, 1120, 1654, 2452, 2567 |
| PvuII | CAGCTG | 2 cut(s) | 8, 464 |
| RsaI | GTAC | 5 cut(s) | 52, 402, 1450, 2314, 2419 |
| RsaNI | GTAC | 5 cut(s) | 51, 401, 1449, 2313, 2418 |
| RseI | CAYNNNNRTG | 3 cut(s) | 207, 256, 974 |
| SaqAI | TTAA | 7 cut(s) | 939, 1014, 1116, 1560, 2025, 2088, 2363 |
| Sau96I | GGNCC | 4 cut(s) | 804, 2215, 2354, 2442 |
| ScrFI | CCNGG | 8 cut(s) | 695, 727, 1910, 2033, 2180, 2213, 2353, 2440 |
| SduI | GDGCHC | 4 cut(s) | 1012, 1644, 1693, 2351 |
| SfaNI | GCATC | 7 cut(s) | 211, 967, 1117, 1654, 2204, 2274, 2715 |
| SfcI | CTRYAG | 5 cut(s) | 1128, 1154, 1248, 1262, 2012 |
| SinI | GGWCC | 3 cut(s) | 804, 2215, 2442 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 207, 256, 974 |
| SmlI | CTYRAG | 3 cut(s) | 938, 2649, 2695 |
| SmoI | CTYRAG | 3 cut(s) | 938, 2649, 2695 |
| SsiI | CCGC | 8 cut(s) | 25, 269, 361, 2290, 2331, 2684, 2700, 2758 |
| SspI | AATATT | 1 cut(s) | 1523 |
| SspMI | CTAG | 4 cut(s) | 234, 1442, 1700, 2786 |
| StyD4I | CCNGG | 8 cut(s) | 693, 725, 1908, 2031, 2178, 2211, 2351, 2438 |
| StyI | CCWWGG | 5 cut(s) | 233, 1747, 2245, 2425, 2801 |
| TaiI | ACGT | 2 cut(s) | 858, 885 |
| TaqI | TCGA | 8 cut(s) | 545, 719, 1004, 1018, 1035, 1659, 1916, 2577 |
| TaqII | GACCGA | 1 cut(s) | 2459 |
| TatI | WGTACW | 3 cut(s) | 400, 2312, 2417 |
| TauI | GCSGC | 3 cut(s) | 364, 2293, 2760 |
| Tru1I | TTAA | 7 cut(s) | 939, 1014, 1116, 1560, 2025, 2088, 2363 |
| Tru9I | TTAA | 7 cut(s) | 939, 1014, 1116, 1560, 2025, 2088, 2363 |
| TscAI | CASTG | 6 cut(s) | 40, 1106, 1691, 1800, 1849, 2059 |
| TseFI | GTSAC | 3 cut(s) | 967, 1409, 1550 |
| Tsp45I | GTSAC | 3 cut(s) | 967, 1409, 1550 |
| TspGWI | ACGGA | 4 cut(s) | 1074, 1719, 2637, 2805 |
| TspRI | CASTG | 6 cut(s) | 40, 1106, 1691, 1800, 1849, 2059 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1481, 2038 |
| Vha464I | CTTAAG | 1 cut(s) | 938 |
| VneI | GTGCAC | 1 cut(s) | 1689 |
| VpaK11BI | GGWCC | 3 cut(s) | 804, 2215, 2442 |
| XapI | RAATTY | 5 cut(s) | 212, 424, 547, 1350, 1362 |
| XceI | RCATGY | 4 cut(s) | 931, 1924, 2257, 2392 |
| XmaJI | CCTAGG | 1 cut(s) | 233 |
| XmnI | GAANNNNTTC | 2 cut(s) | 442, 2509 |
| XspI | CTAG | 4 cut(s) | 234, 1442, 1700, 2786 |
| Zsp2I | ATGCAT | 1 cut(s) | 2206 |