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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13950 AT5G13950 AT5G13950 AT5G13950 |
| fragaria_vesca | FvH4_6g54340 FvH4_6g54340 FvH4_6g54340 FvH4_6g54340 |
| malus_domestica | MD09G1002200.v1.1 MD17G1006400.v1.1 |
| prunus_persica | Prupe.3G314000_v2.0.a1 Prupe.3G314000_v2.0.a1 Prupe.3G314000_v2.0.a1 |
| pyrus_communis | pycom111g00170 pycom17g00200 |
| rosa_chinensis | RchiOBHm_Chr2g0176561 |
| rosa_laevigata | RLG00000022425 |
| rosa_roxburghii | Rroxscaffold_2G00076300 |
| rosa_rugosa | Rorug02G0596200 |
| rosa_samantha | Rh2AG674100 Rh2BG685300 Rh2CG648300 Rh2DG699200 |
| rosa_wichuraiana | Rw2G055290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 583 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2474 |
| AccBSI | CCGCTC | 1 cut(s) | 1030 |
| AccI | GTMKAC | 1 cut(s) | 2091 |
| AciI | CCGC | 5 cut(s) | 5, 354, 1030, 2394, 2555 |
| AclWI | GGATC | 6 cut(s) | 162, 590, 603, 806, 873, 2573 |
| AcsI | RAATTY | 6 cut(s) | 178, 268, 785, 835, 1976, 2548 |
| AcuI | CTGAAG | 5 cut(s) | 62, 98, 1010, 1262, 1858 |
| AfaI | GTAC | 8 cut(s) | 536, 1062, 1407, 1599, 1624, 2278, 2311, 2466 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 2453, 2474 |
| AflIII | ACRYGT | 3 cut(s) | 939, 1270, 1721 |
| AgsI | TTSAA | 8 cut(s) | 184, 208, 571, 1268, 1913, 2033, 2151, 2177 |
| AhlI | ACTAGT | 1 cut(s) | 2279 |
| AjiI | CACGTC | 1 cut(s) | 94 |
| AjnI | CCWGG | 2 cut(s) | 1016, 2212 |
| AleI | CACNNNNGTG | 1 cut(s) | 1797 |
| Alw21I | GWGCWC | 2 cut(s) | 862, 1654 |
| Alw26I | GTCTC | 4 cut(s) | 885, 1026, 1236, 1821 |
| AlwI | GGATC | 6 cut(s) | 162, 590, 603, 806, 873, 2573 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 801, 2053 |
| Ama87I | CYCGRG | 1 cut(s) | 1025 |
| AoxI | GGCC | 2 cut(s) | 1927, 2153 |
| ApeKI | GCWGC | 4 cut(s) | 340, 1145, 2038, 2510 |
| ApoI | RAATTY | 6 cut(s) | 178, 268, 785, 835, 1976, 2548 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1183, 1215 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 512, 812, 1908 |
| AspLEI | GCGC | 3 cut(s) | 584, 909, 2026 |
| AspS9I | GGNCC | 2 cut(s) | 1927, 2216 |
| AsuC2I | CCSGG | 2 cut(s) | 1142, 1410 |
| AsuHPI | GGTGA | 4 cut(s) | 464, 1373, 1436, 2018 |
| AvaI | CYCGRG | 1 cut(s) | 1025 |
| AvaII | GGWCC | 1 cut(s) | 2216 |
| AxyI | CCTNAGG | 1 cut(s) | 246 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1623, 1656 |
| BamHI | GGATCC | 1 cut(s) | 595 |
| Bbv12I | GWGCWC | 2 cut(s) | 862, 1654 |
| BbvCI | CCTCAGC | 1 cut(s) | 2220 |
| BbvI | GCAGC | 4 cut(s) | 352, 1157, 2050, 2522 |
| BccI | CCATC | 9 cut(s) | 116, 468, 848, 920, 1176, 1388, 2003, 2123, 2388 |
| BciT130I | CCWGG | 2 cut(s) | 1018, 2214 |
| BclI | TGATCA | 1 cut(s) | 10 |
| BcnI | CCSGG | 2 cut(s) | 1142, 1410 |
| BcoDI | GTCTC | 4 cut(s) | 885, 1026, 1236, 1821 |
| BcuI | ACTAGT | 1 cut(s) | 2279 |
| BfaI | CTAG | 5 cut(s) | 36, 351, 1665, 2280, 2415 |
| BfmI | CTRYAG | 4 cut(s) | 916, 1418, 1626, 1803 |
| BisI | GCNGC | 5 cut(s) | 6, 341, 1146, 2039, 2511 |
| BlpI | GCTNAGC | 1 cut(s) | 2397 |
| BlsI | GCNGC | 5 cut(s) | 7, 342, 1147, 2040, 2512 |
| BmcAI | AGTACT | 1 cut(s) | 1624 |
| Bme1390I | CCNGG | 4 cut(s) | 1018, 1142, 1410, 2214 |
| Bme18I | GGWCC | 1 cut(s) | 2216 |
| BmeT110I | CYCGRG | 1 cut(s) | 1025 |
| BmgBI | CACGTC | 1 cut(s) | 94 |
| BmgT120I | GGNCC | 2 cut(s) | 1927, 2216 |
| BmiI | GGNNCC | 4 cut(s) | 597, 1870, 2169, 2612 |
| BmrFI | CCNGG | 4 cut(s) | 1018, 1142, 1410, 2214 |
| BmsI | GCATC | 4 cut(s) | 457, 569, 1422, 2566 |
| BpmI | CTGGAG | 4 cut(s) | 1620, 2081, 2154, 2496 |
| Bpu10I | CCTNAGC | 3 cut(s) | 448, 1226, 2220 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2397 |
| BpuEI | CTTGAG | 1 cut(s) | 713 |
| BpuMI | CCSGG | 2 cut(s) | 1142, 1410 |
| BsaAI | YACGTR | 1 cut(s) | 2576 |
| BsaBI | GATNNNNATC | 2 cut(s) | 126, 459 |
| BsaI | GGTCTC | 2 cut(s) | 1026, 1236 |
| BsaJI | CCNNGG | 4 cut(s) | 705, 1320, 1440, 2447 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 2453, 2474 |
| Bse1I | ACTGG | 6 cut(s) | 1118, 1163, 1637, 1743, 2047, 2171 |
| Bse21I | CCTNAGG | 1 cut(s) | 246 |
| Bse3DI | GCAATG | 2 cut(s) | 383, 2546 |
| Bse8I | GATNNNNATC | 2 cut(s) | 126, 459 |
| BseBI | CCWGG | 2 cut(s) | 1018, 2214 |
| BseDI | CCNNGG | 4 cut(s) | 705, 1320, 1440, 2447 |
| BseGI | GGATG | 8 cut(s) | 88, 127, 460, 1249, 1288, 1413, 2380, 2550 |
| BseJI | GATNNNNATC | 2 cut(s) | 126, 459 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 2453, 2474 |
| BseMI | GCAATG | 2 cut(s) | 383, 2546 |
| BseNI | ACTGG | 6 cut(s) | 1118, 1163, 1637, 1743, 2047, 2171 |
| BseRI | GAGGAG | 1 cut(s) | 795 |
| BseXI | GCAGC | 4 cut(s) | 352, 1157, 2050, 2522 |
| BseYI | CCCAGC | 2 cut(s) | 392, 1346 |
| BsgI | GTGCAG | 3 cut(s) | 635, 1554, 2201 |
| BshFI | GGCC | 2 cut(s) | 1929, 2155 |
| BsiHKAI | GWGCWC | 2 cut(s) | 862, 1654 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1025 |
| BsiSI | CCGG | 3 cut(s) | 1142, 1410, 2156 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 2453, 2474 |
| BsmAI | GTCTC | 4 cut(s) | 885, 1026, 1236, 1821 |
| BsmI | GAATGC | 1 cut(s) | 1008 |
| BsnI | GGCC | 2 cut(s) | 1929, 2155 |
| Bso31I | GGTCTC | 2 cut(s) | 1026, 1236 |
| BsoBI | CYCGRG | 1 cut(s) | 1025 |
| Bsp1286I | GDGCHC | 2 cut(s) | 862, 1654 |
| Bsp1407I | TGTACA | 1 cut(s) | 1060 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2397 |
| Bsp19I | CCATGG | 2 cut(s) | 705, 1320 |
| BspACI | CCGC | 5 cut(s) | 5, 354, 1030, 2394, 2555 |
| BspANI | GGCC | 2 cut(s) | 1929, 2155 |
| BspHI | TCATGA | 1 cut(s) | 1489 |
| BspLI | GGNNCC | 4 cut(s) | 597, 1870, 2169, 2612 |
| BspMAI | CTGCAG | 1 cut(s) | 1630 |
| BspPI | GGATC | 6 cut(s) | 162, 590, 603, 806, 873, 2573 |
| BspQI | GCTCTTC | 1 cut(s) | 2028 |
| BspTNI | GGTCTC | 2 cut(s) | 1026, 1236 |
| BsrBI | CCGCTC | 1 cut(s) | 1030 |
| BsrDI | GCAATG | 2 cut(s) | 383, 2546 |
| BsrGI | TGTACA | 1 cut(s) | 1060 |
| BsrI | ACTGG | 6 cut(s) | 1118, 1163, 1637, 1743, 2047, 2171 |
| BssECI | CCNNGG | 4 cut(s) | 705, 1320, 1440, 2447 |
| BssNAI | GTATAC | 1 cut(s) | 2092 |
| BssT1I | CCWWGG | 2 cut(s) | 705, 1320 |
| Bst1107I | GTATAC | 1 cut(s) | 2092 |
| Bst2UI | CCWGG | 2 cut(s) | 1018, 2214 |
| Bst4CI | ACNGT | 4 cut(s) | 920, 1310, 1832, 2431 |
| Bst6I | CTCTTC | 3 cut(s) | 117, 2028, 2069 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 385, 389, 866, 1117, 1151 |
| BstAUI | TGTACA | 1 cut(s) | 1060 |
| BstBAI | YACGTR | 1 cut(s) | 2576 |
| BstC8I | GCNNGC | 7 cut(s) | 381, 390, 586, 742, 1758, 1937, 2364 |
| BstDSI | CCRYGG | 3 cut(s) | 705, 1320, 1440 |
| BstEII | GGTNACC | 1 cut(s) | 1040 |
| BstF5I | GGATG | 8 cut(s) | 88, 127, 460, 1249, 1288, 1413, 2380, 2550 |
| BstHHI | GCGC | 3 cut(s) | 584, 909, 2026 |
| BstMAI | GTCTC | 4 cut(s) | 885, 1026, 1236, 1821 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 385, 389, 866, 1117, 1151, 2062 |
| BstNI | CCWGG | 2 cut(s) | 1018, 2214 |
| BstNSI | RCATGY | 7 cut(s) | 668, 744, 943, 1274, 1725, 1939, 2098 |
| BstPI | GGTNACC | 1 cut(s) | 1040 |
| BstSCI | CCNGG | 4 cut(s) | 1016, 1140, 1408, 2212 |
| BstSFI | CTRYAG | 4 cut(s) | 916, 1418, 1626, 1803 |
| BstV1I | GCAGC | 4 cut(s) | 352, 1157, 2050, 2522 |
| BstX2I | RGATCY | 3 cut(s) | 595, 798, 878 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1384, 1447 |
| BstYI | RGATCY | 3 cut(s) | 595, 798, 878 |
| BstZ17I | GTATAC | 1 cut(s) | 2092 |
| Bsu36I | CCTNAGG | 1 cut(s) | 246 |
| BsuRI | GGCC | 2 cut(s) | 1929, 2155 |
| BtgI | CCRYGG | 3 cut(s) | 705, 1320, 1440 |
| BtgZI | GCGATG | 1 cut(s) | 939 |
| BtrI | CACGTC | 1 cut(s) | 94 |
| BtsCI | GGATG | 8 cut(s) | 88, 127, 460, 1249, 1288, 1413, 2380, 2550 |
| BtsI | GCAGTG | 1 cut(s) | 2051 |
| BtsIMutI | CAGTG | 8 cut(s) | 122, 774, 1111, 1537, 1750, 1837, 2051, 2341 |
| Cac8I | GCNNGC | 7 cut(s) | 381, 390, 586, 742, 1758, 1937, 2364 |
| CaiI | CAGNNNCTG | 2 cut(s) | 801, 2053 |
| CciI | TCATGA | 1 cut(s) | 1489 |
| CfoI | GCGC | 3 cut(s) | 584, 909, 2026 |
| Cfr13I | GGNCC | 2 cut(s) | 1927, 2216 |
| Csp6I | GTAC | 8 cut(s) | 535, 1061, 1406, 1598, 1623, 2277, 2310, 2465 |
| CviQI | GTAC | 8 cut(s) | 535, 1061, 1406, 1598, 1623, 2277, 2310, 2465 |
| Eam1104I | CTCTTC | 3 cut(s) | 117, 2028, 2069 |
| EarI | CTCTTC | 3 cut(s) | 117, 2028, 2069 |
| Eco130I | CCWWGG | 2 cut(s) | 705, 1320 |
| Eco31I | GGTCTC | 2 cut(s) | 1026, 1236 |
| Eco32I | GATATC | 1 cut(s) | 1138 |
| Eco47I | GGWCC | 1 cut(s) | 2216 |
| Eco57I | CTGAAG | 5 cut(s) | 62, 98, 1010, 1262, 1858 |
| Eco81I | CCTNAGG | 1 cut(s) | 246 |
| Eco88I | CYCGRG | 1 cut(s) | 1025 |
| Eco91I | GGTNACC | 1 cut(s) | 1040 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2216 |
| EcoO65I | GGTNACC | 1 cut(s) | 1040 |
| EcoRI | GAATTC | 1 cut(s) | 1976 |
| EcoRII | CCWGG | 2 cut(s) | 1016, 2212 |
| EcoRV | GATATC | 1 cut(s) | 1138 |
| EcoT14I | CCWWGG | 2 cut(s) | 705, 1320 |
| EcoT22I | ATGCAT | 1 cut(s) | 1173 |
| ErhI | CCWWGG | 2 cut(s) | 705, 1320 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 267, 299, 372, 404, 2359, 2391 |
| FauI | CCCGC | 2 cut(s) | 1023, 2401 |
| FauNDI | CATATG | 2 cut(s) | 289, 1069 |
| FbaI | TGATCA | 1 cut(s) | 10 |
| FblI | GTMKAC | 1 cut(s) | 2091 |
| Fnu4HI | GCNGC | 5 cut(s) | 6, 341, 1146, 2039, 2511 |
| FokI | GGATG | 8 cut(s) | 95, 134, 447, 1256, 1295, 1400, 2367, 2557 |
| Fsp4HI | GCNGC | 5 cut(s) | 6, 341, 1146, 2039, 2511 |
| FspBI | CTAG | 5 cut(s) | 36, 351, 1665, 2280, 2415 |
| FspI | TGCGCA | 1 cut(s) | 583 |
| GlaI | GCGC | 3 cut(s) | 583, 908, 2025 |
| GluI | GCNGC | 5 cut(s) | 6, 341, 1146, 2039, 2511 |
| GsaI | CCCAGC | 2 cut(s) | 396, 1350 |
| GsuI | CTGGAG | 4 cut(s) | 1620, 2081, 2154, 2496 |
| HaeIII | GGCC | 2 cut(s) | 1929, 2155 |
| HapII | CCGG | 3 cut(s) | 1142, 1410, 2156 |
| HhaI | GCGC | 3 cut(s) | 584, 909, 2026 |
| Hin6I | GCGC | 3 cut(s) | 582, 907, 2024 |
| HinP1I | GCGC | 3 cut(s) | 582, 907, 2024 |
| HindIII | AAGCTT | 2 cut(s) | 1475, 2326 |
| HpaII | CCGG | 3 cut(s) | 1142, 1410, 2156 |
| HphI | GGTGA | 4 cut(s) | 464, 1373, 1436, 2018 |
| Hpy166II | GTNNAC | 6 cut(s) | 97, 772, 1642, 2092, 2573, 2591 |
| Hpy8I | GTNNAC | 6 cut(s) | 97, 772, 1642, 2092, 2573, 2591 |
| HpyAV | CCTTC | 5 cut(s) | 565, 1201, 1244, 1675, 1882 |
| HpyCH4III | ACNGT | 4 cut(s) | 920, 1310, 1832, 2431 |
| HpyCH4IV | ACGT | 2 cut(s) | 93, 2575 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 385, 389, 866, 1117, 1151, 2062 |
| HpySE526I | ACGT | 2 cut(s) | 93, 2575 |
| HspAI | GCGC | 3 cut(s) | 582, 907, 2024 |
| Ksp22I | TGATCA | 1 cut(s) | 10 |
| LguI | GCTCTTC | 1 cut(s) | 2028 |
| LmnI | GCTCC | 9 cut(s) | 40, 857, 872, 1298, 1649, 2062, 2173, 2418, 2477 |
| Lsp1109I | GCAGC | 4 cut(s) | 352, 1157, 2050, 2522 |
| LweI | GCATC | 4 cut(s) | 457, 569, 1422, 2566 |
| MaeI | CTAG | 5 cut(s) | 36, 351, 1665, 2280, 2415 |
| MaeII | ACGT | 2 cut(s) | 93, 2575 |
| MbiI | CCGCTC | 1 cut(s) | 1030 |
| MfeI | CAATTG | 2 cut(s) | 1121, 2357 |
| MflI | RGATCY | 3 cut(s) | 595, 798, 878 |
| MhlI | GDGCHC | 2 cut(s) | 862, 1654 |
| MlyI | GAGTC | 3 cut(s) | 1547, 1817, 2263 |
| MmeI | TCCRAC | 3 cut(s) | 1521, 1836, 1953 |
| Mph1103I | ATGCAT | 1 cut(s) | 1173 |
| MroXI | GAANNNNTTC | 3 cut(s) | 512, 812, 1908 |
| MspA1I | CMGCKG | 2 cut(s) | 310, 2396 |
| MspI | CCGG | 3 cut(s) | 1142, 1410, 2156 |
| MspR9I | CCNGG | 4 cut(s) | 1018, 1142, 1410, 2214 |
| MunI | CAATTG | 2 cut(s) | 1121, 2357 |
| Mva1269I | GAATGC | 1 cut(s) | 1008 |
| MvaI | CCWGG | 2 cut(s) | 1018, 2214 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 385, 389, 866, 1117, 1151, 2062 |
| NciI | CCSGG | 2 cut(s) | 1142, 1410 |
| NcoI | CCATGG | 2 cut(s) | 705, 1320 |
| NdeI | CATATG | 2 cut(s) | 289, 1069 |
| NlaIV | GGNNCC | 4 cut(s) | 597, 1870, 2169, 2612 |
| NmuCI | GTSAC | 4 cut(s) | 1256, 1424, 1724, 2049 |
| NsbI | TGCGCA | 1 cut(s) | 583 |
| NsiI | ATGCAT | 1 cut(s) | 1173 |
| NspI | RCATGY | 7 cut(s) | 668, 744, 943, 1274, 1725, 1939, 2098 |
| OliI | CACNNNNGTG | 1 cut(s) | 1797 |
| PaeI | GCATGC | 2 cut(s) | 744, 1939 |
| PaeR7I | CTCGAG | 1 cut(s) | 1025 |
| PagI | TCATGA | 1 cut(s) | 1489 |
| PciI | ACATGT | 3 cut(s) | 939, 1270, 1721 |
| PciSI | GCTCTTC | 1 cut(s) | 2028 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2612 |
| PctI | GAATGC | 1 cut(s) | 1008 |
| PdmI | GAANNNNTTC | 3 cut(s) | 512, 812, 1908 |
| PflFI | GACNNNGTC | 1 cut(s) | 1195 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2474 |
| PkrI | GCNGC | 5 cut(s) | 7, 342, 1147, 2040, 2512 |
| PleI | GAGTC | 3 cut(s) | 1546, 1816, 2262 |
| PpsI | GAGTC | 3 cut(s) | 1546, 1816, 2262 |
| Ppu21I | YACGTR | 1 cut(s) | 2576 |
| PpuMI | RGGWCCY | 1 cut(s) | 2216 |
| PscI | ACATGT | 3 cut(s) | 939, 1270, 1721 |
| Psp5II | RGGWCCY | 1 cut(s) | 2216 |
| Psp6I | CCWGG | 2 cut(s) | 1016, 2212 |
| PspEI | GGTNACC | 1 cut(s) | 1040 |
| PspFI | CCCAGC | 2 cut(s) | 392, 1346 |
| PspGI | CCWGG | 2 cut(s) | 1016, 2212 |
| PspN4I | GGNNCC | 4 cut(s) | 597, 1870, 2169, 2612 |
| PspPI | GGNCC | 2 cut(s) | 1927, 2216 |
| PspPPI | RGGWCCY | 1 cut(s) | 2216 |
| PstI | CTGCAG | 1 cut(s) | 1630 |
| PstNI | CAGNNNCTG | 2 cut(s) | 801, 2053 |
| PsuI | RGATCY | 3 cut(s) | 595, 798, 878 |
| PsyI | GACNNNGTC | 1 cut(s) | 1195 |
| PvuII | CAGCTG | 1 cut(s) | 310 |
| RsaI | GTAC | 8 cut(s) | 536, 1062, 1407, 1599, 1624, 2278, 2311, 2466 |
| RsaNI | GTAC | 8 cut(s) | 535, 1061, 1406, 1598, 1623, 2277, 2310, 2465 |
| SapI | GCTCTTC | 1 cut(s) | 2028 |
| SatI | GCNGC | 5 cut(s) | 6, 341, 1146, 2039, 2511 |
| Sau96I | GGNCC | 2 cut(s) | 1927, 2216 |
| ScaI | AGTACT | 1 cut(s) | 1624 |
| SchI | GAGTC | 3 cut(s) | 1547, 1817, 2263 |
| ScrFI | CCNGG | 4 cut(s) | 1018, 1142, 1410, 2214 |
| SduI | GDGCHC | 2 cut(s) | 862, 1654 |
| SfaNI | GCATC | 4 cut(s) | 457, 569, 1422, 2566 |
| SfcI | CTRYAG | 4 cut(s) | 916, 1418, 1626, 1803 |
| Sfr274I | CTCGAG | 1 cut(s) | 1025 |
| SinI | GGWCC | 1 cut(s) | 2216 |
| SlaI | CTCGAG | 1 cut(s) | 1025 |
| SmlI | CTYRAG | 3 cut(s) | 692, 1025, 2599 |
| SmoI | CTYRAG | 3 cut(s) | 692, 1025, 2599 |
| SpeI | ACTAGT | 1 cut(s) | 2279 |
| SphI | GCATGC | 2 cut(s) | 744, 1939 |
| SsiI | CCGC | 5 cut(s) | 5, 354, 1030, 2394, 2555 |
| SspI | AATATT | 1 cut(s) | 67 |
| SspMI | CTAG | 5 cut(s) | 36, 351, 1665, 2280, 2415 |
| StyD4I | CCNGG | 4 cut(s) | 1016, 1140, 1408, 2212 |
| StyI | CCWWGG | 2 cut(s) | 705, 1320 |
| TaaI | ACNGT | 4 cut(s) | 920, 1310, 1832, 2431 |
| TaiI | ACGT | 2 cut(s) | 96, 2578 |
| TaqI | TCGA | 2 cut(s) | 645, 1026 |
| TatI | WGTACW | 2 cut(s) | 1060, 1622 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TscAI | CASTG | 8 cut(s) | 122, 774, 1118, 1537, 1750, 1837, 2058, 2341 |
| TseFI | GTSAC | 4 cut(s) | 1256, 1424, 1724, 2049 |
| TseI | GCWGC | 4 cut(s) | 340, 1145, 2038, 2510 |
| Tsp45I | GTSAC | 4 cut(s) | 1256, 1424, 1724, 2049 |
| TspGWI | ACGGA | 2 cut(s) | 1457, 1625 |
| TspRI | CASTG | 8 cut(s) | 122, 774, 1118, 1537, 1750, 1837, 2058, 2341 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1195 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2474 |
| VpaK11BI | GGWCC | 1 cut(s) | 2216 |
| XapI | RAATTY | 6 cut(s) | 178, 268, 785, 835, 1976, 2548 |
| XceI | RCATGY | 7 cut(s) | 668, 744, 943, 1274, 1725, 1939, 2098 |
| XhoI | CTCGAG | 1 cut(s) | 1025 |
| XmiI | GTMKAC | 1 cut(s) | 2091 |
| XmnI | GAANNNNTTC | 3 cut(s) | 512, 812, 1908 |
| XspI | CTAG | 5 cut(s) | 36, 351, 1665, 2280, 2415 |
| ZrmI | AGTACT | 1 cut(s) | 1624 |
| Zsp2I | ATGCAT | 1 cut(s) | 1173 |