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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13950 AT5G13950 AT5G13950 AT5G13950 |
| fragaria_vesca | FvH4_6g54340 FvH4_6g54340 FvH4_6g54340 FvH4_6g54340 |
| malus_domestica | MD09G1002200.v1.1 MD17G1006400.v1.1 |
| prunus_persica | Prupe.3G314000_v2.0.a1 Prupe.3G314000_v2.0.a1 Prupe.3G314000_v2.0.a1 |
| pyrus_communis | pycom111g00170 pycom17g00200 |
| rosa_chinensis | RchiOBHm_Chr2g0176561 |
| rosa_laevigata | RLG00000022425 |
| rosa_roxburghii | Rroxscaffold_2G00076300 |
| rosa_rugosa | Rorug02G0596200 |
| rosa_samantha | Rh2AG674100 Rh2BG685300 Rh2CG648300 Rh2DG699200 |
| rosa_wichuraiana | Rw2G055290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 334 |
| Acc16I | TGCGCA | 2 cut(s) | 1731, 2148 |
| AccII | CGCG | 3 cut(s) | 692, 711, 1580 |
| AciI | CCGC | 5 cut(s) | 6, 502, 709, 1216, 1580 |
| AclWI | GGATC | 5 cut(s) | 614, 627, 839, 906, 2576 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 121 |
| AcuI | CTGAAG | 4 cut(s) | 608, 806, 1295, 1828 |
| AdeI | CACNNNGTG | 1 cut(s) | 1394 |
| AfaI | GTAC | 5 cut(s) | 1095, 1504, 1577, 1633, 2281 |
| AfeI | AGCGCT | 1 cut(s) | 26 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1273, 2456 |
| AflIII | ACRYGT | 2 cut(s) | 972, 1368 |
| AgsI | TTSAA | 5 cut(s) | 232, 595, 1880, 2118, 2370 |
| AhlI | ACTAGT | 2 cut(s) | 1451, 2282 |
| AjnI | CCWGG | 4 cut(s) | 1049, 1266, 1378, 2179 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1368, 1400 |
| AluBI | AGCT | 9 cut(s) | 195, 612, 773, 1086, 1181, 1305, 1447, 2331, 2480 |
| AluI | AGCT | 9 cut(s) | 195, 612, 773, 1086, 1181, 1305, 1447, 2331, 2480 |
| Alw26I | GTCTC | 3 cut(s) | 918, 1059, 1791 |
| AlwI | GGATC | 5 cut(s) | 614, 627, 839, 906, 2576 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1447, 2020 |
| Aor51HI | AGCGCT | 1 cut(s) | 26 |
| AoxI | GGCC | 3 cut(s) | 3, 209, 1894 |
| ApeKI | GCWGC | 5 cut(s) | 51, 1178, 2005, 2065, 2477 |
| ApoI | RAATTY | 1 cut(s) | 121 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1216, 1248 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 845, 1875, 2597 |
| AspA2I | CCTAGG | 1 cut(s) | 2417 |
| AspLEI | GCGC | 3 cut(s) | 27, 1732, 2149 |
| AspS9I | GGNCC | 3 cut(s) | 380, 1894, 2183 |
| AsuC2I | CCSGG | 2 cut(s) | 1064, 2436 |
| AsuHPI | GGTGA | 5 cut(s) | 488, 1298, 1328, 1406, 1469 |
| AsuNHI | GCTAGC | 1 cut(s) | 38 |
| AvaII | GGWCC | 2 cut(s) | 380, 2183 |
| AvrII | CCTAGG | 1 cut(s) | 2417 |
| AxyI | CCTNAGG | 1 cut(s) | 270 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2271, 2304 |
| BamHI | GGATCC | 1 cut(s) | 619 |
| BanII | GRGCYC | 1 cut(s) | 1624 |
| BbsI | GAAGAC | 2 cut(s) | 1344, 1365 |
| BbvI | GCAGC | 5 cut(s) | 38, 1190, 2017, 2077, 2489 |
| BccI | CCATC | 7 cut(s) | 140, 953, 1274, 2090, 2198, 2256, 2528 |
| BceAI | ACGGC | 1 cut(s) | 248 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2502, 2536 |
| BciT130I | CCWGG | 4 cut(s) | 1051, 1268, 1380, 2181 |
| BclI | TGATCA | 2 cut(s) | 10, 1915 |
| BcnI | CCSGG | 2 cut(s) | 1064, 2436 |
| BcoDI | GTCTC | 3 cut(s) | 918, 1059, 1791 |
| BcuI | ACTAGT | 2 cut(s) | 1451, 2282 |
| BfaI | CTAG | 7 cut(s) | 39, 60, 375, 1259, 1452, 2283, 2418 |
| BfmI | CTRYAG | 2 cut(s) | 949, 1208 |
| BfoI | RGCGCY | 1 cut(s) | 28 |
| BglII | AGATCT | 1 cut(s) | 1168 |
| BisI | GCNGC | 7 cut(s) | 6, 52, 1179, 1217, 2006, 2066, 2478 |
| BlnI | CCTAGG | 1 cut(s) | 2417 |
| BlsI | GCNGC | 7 cut(s) | 7, 53, 1180, 1218, 2007, 2067, 2479 |
| BmcAI | AGTACT | 1 cut(s) | 1504 |
| Bme1390I | CCNGG | 6 cut(s) | 1051, 1064, 1268, 1380, 2181, 2436 |
| Bme18I | GGWCC | 2 cut(s) | 380, 2183 |
| BmgT120I | GGNCC | 3 cut(s) | 380, 1894, 2183 |
| BmiI | GGNNCC | 5 cut(s) | 621, 1621, 1840, 2185, 2615 |
| BmrFI | CCNGG | 6 cut(s) | 1051, 1064, 1268, 1380, 2181, 2436 |
| BmrI | ACTGGG | 2 cut(s) | 1812, 1944 |
| BmtI | GCTAGC | 1 cut(s) | 42 |
| BmuI | ACTGGG | 2 cut(s) | 1812, 1944 |
| BpiI | GAAGAC | 2 cut(s) | 1344, 1365 |
| BpmI | CTGGAG | 4 cut(s) | 217, 1796, 2048, 2259 |
| Bpu10I | CCTNAGC | 1 cut(s) | 472 |
| BpuEI | CTTGAG | 2 cut(s) | 158, 737 |
| BpuMI | CCSGG | 2 cut(s) | 1064, 2436 |
| BsaAI | YACGTR | 3 cut(s) | 838, 1631, 2579 |
| BsaBI | GATNNNNATC | 1 cut(s) | 150 |
| BsaI | GGTCTC | 1 cut(s) | 1059 |
| BsaJI | CCNNGG | 5 cut(s) | 1266, 1353, 1410, 2417, 2450 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1273, 2456 |
| Bse1I | ACTGG | 9 cut(s) | 1151, 1500, 1655, 1713, 1807, 1939, 2014, 2234, 2387 |
| Bse21I | CCTNAGG | 1 cut(s) | 270 |
| Bse3DI | GCAATG | 2 cut(s) | 407, 2549 |
| Bse8I | GATNNNNATC | 1 cut(s) | 150 |
| BseBI | CCWGG | 4 cut(s) | 1051, 1268, 1380, 2181 |
| BseDI | CCNNGG | 5 cut(s) | 1266, 1353, 1410, 2417, 2450 |
| BseGI | GGATG | 7 cut(s) | 151, 1282, 1732, 2267, 2383, 2544, 2553 |
| BseJI | GATNNNNATC | 1 cut(s) | 150 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1273, 2456 |
| BseMI | GCAATG | 2 cut(s) | 407, 2549 |
| BseMII | CTCAG | 6 cut(s) | 261, 486, 813, 1563, 2070, 2391 |
| BseNI | ACTGG | 9 cut(s) | 1151, 1500, 1655, 1713, 1807, 1939, 2014, 2234, 2387 |
| BseRI | GAGGAG | 1 cut(s) | 2015 |
| BseXI | GCAGC | 5 cut(s) | 38, 1190, 2017, 2077, 2489 |
| BseYI | CCCAGC | 1 cut(s) | 1174 |
| BsgI | GTGCAG | 1 cut(s) | 659 |
| Bsh1236I | CGCG | 3 cut(s) | 692, 711, 1580 |
| BshFI | GGCC | 3 cut(s) | 5, 211, 1896 |
| BsiSI | CCGG | 2 cut(s) | 1063, 2435 |
| BslFI | GGGAC | 1 cut(s) | 1249 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1273, 2456 |
| BsmAI | GTCTC | 3 cut(s) | 918, 1059, 1791 |
| BsmFI | GGGAC | 1 cut(s) | 1249 |
| BsmI | GAATGC | 2 cut(s) | 1041, 2436 |
| BsnI | GGCC | 3 cut(s) | 5, 211, 1896 |
| Bso31I | GGTCTC | 1 cut(s) | 1059 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1624 |
| Bsp1407I | TGTACA | 1 cut(s) | 1093 |
| Bsp19I | CCATGG | 1 cut(s) | 1410 |
| BspACI | CCGC | 5 cut(s) | 6, 502, 709, 1216, 1580 |
| BspANI | GGCC | 3 cut(s) | 5, 211, 1896 |
| BspCNI | CTCAG | 6 cut(s) | 262, 485, 812, 1564, 2071, 2392 |
| BspFNI | CGCG | 3 cut(s) | 692, 711, 1580 |
| BspHI | TCATGA | 1 cut(s) | 1918 |
| BspLI | GGNNCC | 5 cut(s) | 621, 1621, 1840, 2185, 2615 |
| BspOI | GCTAGC | 1 cut(s) | 42 |
| BspPI | GGATC | 5 cut(s) | 614, 627, 839, 906, 2576 |
| BspQI | GCTCTTC | 2 cut(s) | 1116, 1743 |
| BspTNI | GGTCTC | 1 cut(s) | 1059 |
| BsrDI | GCAATG | 2 cut(s) | 407, 2549 |
| BsrGI | TGTACA | 1 cut(s) | 1093 |
| BsrI | ACTGG | 9 cut(s) | 1151, 1500, 1655, 1713, 1807, 1939, 2014, 2234, 2387 |
| BssECI | CCNNGG | 5 cut(s) | 1266, 1353, 1410, 2417, 2450 |
| BssT1I | CCWWGG | 3 cut(s) | 1353, 1410, 2417 |
| Bst2UI | CCWGG | 4 cut(s) | 1051, 1268, 1380, 2181 |
| Bst4CI | ACNGT | 6 cut(s) | 366, 513, 733, 953, 1002, 1609 |
| Bst6I | CTCTTC | 2 cut(s) | 1116, 1743 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 400, 409, 1150, 1184, 2483 |
| BstAUI | TGTACA | 1 cut(s) | 1093 |
| BstBAI | YACGTR | 3 cut(s) | 838, 1631, 2579 |
| BstC8I | GCNNGC | 7 cut(s) | 40, 405, 610, 1307, 1664, 1693, 2034 |
| BstDEI | CTNAG | 7 cut(s) | 270, 472, 799, 1572, 2079, 2200, 2400 |
| BstDSI | CCRYGG | 1 cut(s) | 1410 |
| BstEII | GGTNACC | 1 cut(s) | 1073 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1271 |
| BstF5I | GGATG | 7 cut(s) | 151, 1282, 1732, 2267, 2383, 2544, 2553 |
| BstFNI | CGCG | 3 cut(s) | 692, 711, 1580 |
| BstH2I | RGCGCY | 1 cut(s) | 28 |
| BstHHI | GCGC | 3 cut(s) | 27, 1732, 2149 |
| BstMAI | GTCTC | 3 cut(s) | 918, 1059, 1791 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 48, 400, 409, 890, 937, 1150, 1184, 2029, 2483 |
| BstNI | CCWGG | 4 cut(s) | 1051, 1268, 1380, 2181 |
| BstNSI | RCATGY | 4 cut(s) | 976, 1372, 1666, 1906 |
| BstPI | GGTNACC | 1 cut(s) | 1073 |
| BstSCI | CCNGG | 6 cut(s) | 1049, 1062, 1266, 1378, 2179, 2434 |
| BstSFI | CTRYAG | 2 cut(s) | 949, 1208 |
| BstSNI | TACGTA | 1 cut(s) | 1631 |
| BstUI | CGCG | 3 cut(s) | 692, 711, 1580 |
| BstV1I | GCAGC | 5 cut(s) | 38, 1190, 2017, 2077, 2489 |
| BstV2I | GAAGAC | 2 cut(s) | 1344, 1365 |
| BstX2I | RGATCY | 4 cut(s) | 619, 831, 911, 1168 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1417, 1480 |
| BstYI | RGATCY | 4 cut(s) | 619, 831, 911, 1168 |
| Bsu36I | CCTNAGG | 1 cut(s) | 270 |
| BsuRI | GGCC | 3 cut(s) | 5, 211, 1896 |
| BtgI | CCRYGG | 1 cut(s) | 1410 |
| BtgZI | GCGATG | 1 cut(s) | 972 |
| BtsCI | GGATG | 7 cut(s) | 151, 1282, 1732, 2267, 2383, 2544, 2553 |
| BtsI | GCAGTG | 1 cut(s) | 2018 |
| BtsIMutI | CAGTG | 8 cut(s) | 518, 807, 1144, 1720, 1800, 2018, 2344, 2397 |
| Cac8I | GCNNGC | 7 cut(s) | 40, 405, 610, 1307, 1664, 1693, 2034 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1447, 2020 |
| CciI | TCATGA | 1 cut(s) | 1918 |
| CfoI | GCGC | 3 cut(s) | 27, 1732, 2149 |
| Cfr13I | GGNCC | 3 cut(s) | 380, 1894, 2183 |
| Csp6I | GTAC | 5 cut(s) | 1094, 1503, 1576, 1632, 2280 |
| CviQI | GTAC | 5 cut(s) | 1094, 1503, 1576, 1632, 2280 |
| DdeI | CTNAG | 7 cut(s) | 270, 472, 799, 1572, 2079, 2200, 2400 |
| DraIII | CACNNNGTG | 1 cut(s) | 1394 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 334 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 334 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 2 cut(s) | 1116, 1743 |
| EarI | CTCTTC | 2 cut(s) | 1116, 1743 |
| Eco105I | TACGTA | 1 cut(s) | 1631 |
| Eco130I | CCWWGG | 3 cut(s) | 1353, 1410, 2417 |
| Eco24I | GRGCYC | 1 cut(s) | 1624 |
| Eco31I | GGTCTC | 1 cut(s) | 1059 |
| Eco47I | GGWCC | 2 cut(s) | 380, 2183 |
| Eco47III | AGCGCT | 1 cut(s) | 26 |
| Eco57I | CTGAAG | 4 cut(s) | 608, 806, 1295, 1828 |
| Eco81I | CCTNAGG | 1 cut(s) | 270 |
| Eco91I | GGTNACC | 1 cut(s) | 1073 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1271 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2183 |
| EcoO65I | GGTNACC | 1 cut(s) | 1073 |
| EcoRII | CCWGG | 4 cut(s) | 1049, 1266, 1378, 2179 |
| EcoT14I | CCWWGG | 3 cut(s) | 1353, 1410, 2417 |
| EcoT22I | ATGCAT | 2 cut(s) | 1206, 2532 |
| EcoT38I | GRGCYC | 1 cut(s) | 1624 |
| ErhI | CCWWGG | 3 cut(s) | 1353, 1410, 2417 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 291, 323, 396, 428, 2362, 2394, 2585, 2617 |
| FaqI | GGGAC | 1 cut(s) | 1249 |
| FauNDI | CATATG | 2 cut(s) | 979, 1102 |
| FbaI | TGATCA | 2 cut(s) | 10, 1915 |
| Fnu4HI | GCNGC | 7 cut(s) | 6, 52, 1179, 1217, 2006, 2066, 2478 |
| FokI | GGATG | 7 cut(s) | 158, 1289, 1719, 2274, 2370, 2551, 2560 |
| FriOI | GRGCYC | 1 cut(s) | 1624 |
| Fsp4HI | GCNGC | 7 cut(s) | 6, 52, 1179, 1217, 2006, 2066, 2478 |
| FspBI | CTAG | 7 cut(s) | 39, 60, 375, 1259, 1452, 2283, 2418 |
| FspI | TGCGCA | 2 cut(s) | 1731, 2148 |
| GlaI | GCGC | 3 cut(s) | 26, 1731, 2148 |
| GluI | GCNGC | 7 cut(s) | 6, 52, 1179, 1217, 2006, 2066, 2478 |
| GsaI | CCCAGC | 1 cut(s) | 1178 |
| GsuI | CTGGAG | 4 cut(s) | 217, 1796, 2048, 2259 |
| HaeII | RGCGCY | 1 cut(s) | 28 |
| HaeIII | GGCC | 3 cut(s) | 5, 211, 1896 |
| HapII | CCGG | 2 cut(s) | 1063, 2435 |
| HhaI | GCGC | 3 cut(s) | 27, 1732, 2149 |
| Hin6I | GCGC | 3 cut(s) | 25, 1730, 2147 |
| HinP1I | GCGC | 3 cut(s) | 25, 1730, 2147 |
| HindIII | AAGCTT | 1 cut(s) | 771 |
| HpaII | CCGG | 2 cut(s) | 1063, 2435 |
| HphI | GGTGA | 5 cut(s) | 488, 1298, 1328, 1406, 1469 |
| Hpy166II | GTNNAC | 3 cut(s) | 818, 1968, 2576 |
| Hpy8I | GTNNAC | 3 cut(s) | 818, 1968, 2576 |
| HpyAV | CCTTC | 2 cut(s) | 589, 1852 |
| HpyCH4III | ACNGT | 6 cut(s) | 366, 513, 733, 953, 1002, 1609 |
| HpyCH4IV | ACGT | 4 cut(s) | 837, 1630, 2365, 2578 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 48, 400, 409, 890, 937, 1150, 1184, 2029, 2483 |
| HpyF3I | CTNAG | 7 cut(s) | 270, 472, 799, 1572, 2079, 2200, 2400 |
| HpySE526I | ACGT | 4 cut(s) | 837, 1630, 2365, 2578 |
| HspAI | GCGC | 3 cut(s) | 25, 1730, 2147 |
| Ksp22I | TGATCA | 2 cut(s) | 10, 1915 |
| LguI | GCTCTTC | 2 cut(s) | 1116, 1743 |
| LmnI | GCTCC | 6 cut(s) | 64, 905, 1331, 1619, 2002, 2029 |
| Lsp1109I | GCAGC | 5 cut(s) | 38, 1190, 2017, 2077, 2489 |
| MaeI | CTAG | 7 cut(s) | 39, 60, 375, 1259, 1452, 2283, 2418 |
| MaeII | ACGT | 4 cut(s) | 837, 1630, 2365, 2578 |
| MaeIII | GTNAC | 9 cut(s) | 733, 877, 1073, 1847, 1905, 2016, 2294, 2354, 2443 |
| MfeI | CAATTG | 1 cut(s) | 1154 |
| MflI | RGATCY | 4 cut(s) | 619, 831, 911, 1168 |
| MhlI | GDGCHC | 1 cut(s) | 1624 |
| MlyI | GAGTC | 4 cut(s) | 322, 1271, 1787, 2128 |
| MmeI | TCCRAC | 2 cut(s) | 1920, 1972 |
| Mph1103I | ATGCAT | 2 cut(s) | 1206, 2532 |
| MroXI | GAANNNNTTC | 3 cut(s) | 845, 1875, 2597 |
| MslI | CAYNNNNRTG | 5 cut(s) | 489, 693, 1415, 1478, 2202 |
| MspA1I | CMGCKG | 1 cut(s) | 8 |
| MspI | CCGG | 2 cut(s) | 1063, 2435 |
| MspR9I | CCNGG | 6 cut(s) | 1051, 1064, 1268, 1380, 2181, 2436 |
| MunI | CAATTG | 1 cut(s) | 1154 |
| Mva1269I | GAATGC | 2 cut(s) | 1041, 2436 |
| MvaI | CCWGG | 4 cut(s) | 1051, 1268, 1380, 2181 |
| MvnI | CGCG | 3 cut(s) | 692, 711, 1580 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 48, 400, 409, 890, 937, 1150, 1184, 2029, 2483 |
| NciI | CCSGG | 2 cut(s) | 1064, 2436 |
| NcoI | CCATGG | 1 cut(s) | 1410 |
| NdeI | CATATG | 2 cut(s) | 979, 1102 |
| NheI | GCTAGC | 1 cut(s) | 38 |
| NlaIV | GGNNCC | 5 cut(s) | 621, 1621, 1840, 2185, 2615 |
| NmuCI | GTSAC | 2 cut(s) | 2016, 2294 |
| NsbI | TGCGCA | 2 cut(s) | 1731, 2148 |
| NsiI | ATGCAT | 2 cut(s) | 1206, 2532 |
| NspI | RCATGY | 4 cut(s) | 976, 1372, 1666, 1906 |
| PaeI | GCATGC | 1 cut(s) | 1666 |
| PagI | TCATGA | 1 cut(s) | 1918 |
| PciI | ACATGT | 2 cut(s) | 972, 1368 |
| PciSI | GCTCTTC | 2 cut(s) | 1116, 1743 |
| PctI | GAATGC | 2 cut(s) | 1041, 2436 |
| PdmI | GAANNNNTTC | 3 cut(s) | 845, 1875, 2597 |
| PflFI | GACNNNGTC | 1 cut(s) | 1228 |
| PfoI | TCCNGGA | 1 cut(s) | 2179 |
| PkrI | GCNGC | 7 cut(s) | 7, 53, 1180, 1218, 2007, 2067, 2479 |
| PleI | GAGTC | 4 cut(s) | 322, 1270, 1786, 2128 |
| PpsI | GAGTC | 4 cut(s) | 322, 1270, 1786, 2128 |
| Ppu21I | YACGTR | 3 cut(s) | 838, 1631, 2579 |
| PpuMI | RGGWCCY | 1 cut(s) | 2183 |
| PscI | ACATGT | 2 cut(s) | 972, 1368 |
| Psp5II | RGGWCCY | 1 cut(s) | 2183 |
| Psp6I | CCWGG | 4 cut(s) | 1049, 1266, 1378, 2179 |
| PspEI | GGTNACC | 1 cut(s) | 1073 |
| PspFI | CCCAGC | 1 cut(s) | 1174 |
| PspGI | CCWGG | 4 cut(s) | 1049, 1266, 1378, 2179 |
| PspN4I | GGNNCC | 5 cut(s) | 621, 1621, 1840, 2185, 2615 |
| PspPI | GGNCC | 3 cut(s) | 380, 1894, 2183 |
| PspPPI | RGGWCCY | 1 cut(s) | 2183 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 818, 850 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1447, 2020 |
| PsuI | RGATCY | 4 cut(s) | 619, 831, 911, 1168 |
| PsyI | GACNNNGTC | 1 cut(s) | 1228 |
| RsaI | GTAC | 5 cut(s) | 1095, 1504, 1577, 1633, 2281 |
| RsaNI | GTAC | 5 cut(s) | 1094, 1503, 1576, 1632, 2280 |
| RseI | CAYNNNNRTG | 5 cut(s) | 489, 693, 1415, 1478, 2202 |
| SapI | GCTCTTC | 2 cut(s) | 1116, 1743 |
| SatI | GCNGC | 7 cut(s) | 6, 52, 1179, 1217, 2006, 2066, 2478 |
| Sau96I | GGNCC | 3 cut(s) | 380, 1894, 2183 |
| ScaI | AGTACT | 1 cut(s) | 1504 |
| SchI | GAGTC | 4 cut(s) | 322, 1271, 1787, 2128 |
| ScrFI | CCNGG | 6 cut(s) | 1051, 1064, 1268, 1380, 2181, 2436 |
| SduI | GDGCHC | 1 cut(s) | 1624 |
| SfcI | CTRYAG | 2 cut(s) | 949, 1208 |
| SinI | GGWCC | 2 cut(s) | 380, 2183 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 489, 693, 1415, 1478, 2202 |
| SmlI | CTYRAG | 3 cut(s) | 137, 716, 2602 |
| SmoI | CTYRAG | 3 cut(s) | 137, 716, 2602 |
| SnaBI | TACGTA | 1 cut(s) | 1631 |
| SpeI | ACTAGT | 2 cut(s) | 1451, 2282 |
| SphI | GCATGC | 1 cut(s) | 1666 |
| SsiI | CCGC | 5 cut(s) | 6, 502, 709, 1216, 1580 |
| SspI | AATATT | 2 cut(s) | 244, 1703 |
| SspMI | CTAG | 7 cut(s) | 39, 60, 375, 1259, 1452, 2283, 2418 |
| StyD4I | CCNGG | 6 cut(s) | 1049, 1062, 1266, 1378, 2179, 2434 |
| StyI | CCWWGG | 3 cut(s) | 1353, 1410, 2417 |
| TaaI | ACNGT | 6 cut(s) | 366, 513, 733, 953, 1002, 1609 |
| TaiI | ACGT | 4 cut(s) | 840, 1633, 2368, 2581 |
| TaqI | TCGA | 3 cut(s) | 1864, 1987, 2522 |
| TatI | WGTACW | 2 cut(s) | 1093, 1502 |
| TauI | GCSGC | 2 cut(s) | 8, 1219 |
| TscAI | CASTG | 8 cut(s) | 518, 807, 1151, 1720, 1807, 2025, 2344, 2404 |
| TseFI | GTSAC | 2 cut(s) | 2016, 2294 |
| TseI | GCWGC | 5 cut(s) | 51, 1178, 2005, 2065, 2477 |
| Tsp45I | GTSAC | 2 cut(s) | 2016, 2294 |
| TspGWI | ACGGA | 1 cut(s) | 31 |
| TspRI | CASTG | 8 cut(s) | 518, 807, 1151, 1720, 1807, 2025, 2344, 2404 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1228 |
| VpaK11BI | GGWCC | 2 cut(s) | 380, 2183 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1271 |
| XapI | RAATTY | 1 cut(s) | 121 |
| XceI | RCATGY | 4 cut(s) | 976, 1372, 1666, 1906 |
| XmaJI | CCTAGG | 1 cut(s) | 2417 |
| XmnI | GAANNNNTTC | 3 cut(s) | 845, 1875, 2597 |
| XspI | CTAG | 7 cut(s) | 39, 60, 375, 1259, 1452, 2283, 2418 |
| ZrmI | AGTACT | 1 cut(s) | 1504 |
| Zsp2I | ATGCAT | 2 cut(s) | 1206, 2532 |