AT5G39350

Pentatricopeptide repeat-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
15750875 .. 15752962
2088 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G39350.1

Sequence Viewer

Length: 2034 bp
ATGAGTGAAGTTTTGCGCAGAGCCAACAACGCACTTAGTAGCGTCAAGCAATACCAATCTCTCTTGAATCACTTTGCAGCTACTCAATCAATTTCAAAAACCAAAGCTTTACACTGCCACGTCATCACCGGCGGTCGAGTTTCCGGCCACATTCTCTCGACTCTCTCCGTAACTTATGCGTTATGTGGTCACATCACTTATGCACGGAAGCTGTTCGAGGAAATGCCTCAAAGCTCTTTGCTTTCTTATAACATTGTTATTAGAATGTACGTGCGTGAAGGATTGTATCACGATGCGATTAGCGTGTTTATTAGGATGGTTAGTGAGGGGGTTAAGTGTGTTCCGGATGGTTATACATACCCTTTTGTTGCTAAAGCTGCTGGAGAATTGAAATCGATGAAATTGGGGTTGGTTGTTCATGGGAGGATCTTGAGGAGTTGGTTTGGTAGGGATAAGTATGTGCAGAACGCGTTGTTAGCGATGTATATGAACTTTGGGAAGGTTGAAATGGCGAGGGATGTGTTTGATGTGATGAAGAACCGTGATGTGATTTCGTGGAACACGATGATTAGTGGGTATTATAGGAATGGTTATATGAATGATGCGTTAATGATGTTTGATTGGATGGTTAATGAAAGTGTTGATCTTGACCATGCTACGATTGTTTCTATGTTGCCTGTTTGTGGTCACTTGAAGGATTTGGAGATGGGGAGGAATGTTCATAAGTTGGTGGAAGAGAAGCGGTTAGGGGATAAAATTGAGGTGAAGAATGCGTTGGTGAATATGTACTTGAAATGTGGTCGTATGGATGAAGCGAGATTTGTTTTTGACAGGATGGAACGAAGGGATGTGATCACGTGGACTTGTATGATTAACGGATATACTGAAGATGGAGATGTGGAAAACGCTTTAGAGTTGTGTAGATTGATGCAGTTTGAAGGCGTAAGACCTAATGCTGTGACTATAGCTTCTCTTGTTTCGGTGTGTGGTGATGCTTTGAAGGTGAATGATGGTAAATGTTTACACGGTTGGGCGGTGAGGCAACAGGTTTATTCCGATATCATTATAGAAACATCTTTGATCAGCATGTATGCTAAATGCAAACGTGTAGACCTCTGCTTTAGAGTATTTTCGGGGGCTTCGAAATACCATACCGGTCCTTGGAGTGCAATTATCGCTGGTTGTGTACAGAATGAACTTGTGAGTGATGCGTTAGGTCTATTCAAACGGATGCGACGGGAAGATGTGGAGCCCAATATTGCTACATTAAACAGTCTCCTTCCAGCATATGCAGCTTTGGCAGATTTGCGTCAAGCAATGAATATCCATTGCTACCTAACCAAAACCGGGTTTATGTCAAGCCTTGATGCTGCTACAGGGTTGGTTCATGTTTACTCAAAGTGTGGAACATTAGAATCTGCTCACAAGATATTCAATGGAATCCAGGAAAAACACAAGAGCAAAGATGTAGTTCTATGGGGTGCGTTAATATCCGGCTACGGGATGCACGGAGATGGTCATAATGCGTTGCAAGTTTTCATGGAAATGGTTCGATCTGGTGTAACGCCAAACGAAATCACATTTACATCTGCCTTGAATGCTTGCAGTCATTCGGGTTTGGTTGAAGAAGGCTTGACATTATTCAGGTTCATGCTTGAACATTACAAAACGTTAGCCAGATCAAACCATTACACTTGCATTGTTGATCTCCTTGGTCGAGCAGGTCGGTTAGACGAAGCTTACAATCTCATCACAACAATTCCATTTGAACCAACGTCAACCGTTTGGGGTGCGTTGCTTGCTGCTTGTGTCACACATGAGAATGTCCAGCTTGGAGAAATGGCAGCAAACAAGTTGTTCGAGCTGGAACCAGAGAACACGGGCAACTATGTGTTGTTGGCAAACATCTATGCGGCTTTAGGACGATGGAAAGATATGGAGAAGGTGAGAAGCATGATGGAGAATGTTGGATTGAGAAAGAAACCAGGTCATAGCACAATCGAGATCAGAAGTAATTCAGTTGATACAAGATGA

Protein Analysis

677

Amino Acids

75.96

Weight (kDa)

8.19

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 82 - 120 1.6e-06 PPR repeat family
PPR PF01535 82 - 111 1.4e-06 PPR repeat
PPR_2 PF13041 181 - 228 6.3e-11 PPR repeat family
PPR PF01535 184 - 209 8.6e-06 PPR repeat
PPR_2 PF13041 282 - 329 2.7e-10 PPR repeat family
PPR PF01535 285 - 315 5.3e-06 PPR repeat
PPR_2 PF13041 388 - 431 5.5e-07 PPR repeat family
PPR_2 PF13041 488 - 536 4.4e-12 PPR repeat family
PPR_3 PF13812 489 - 535 2.4e-06 Pentatricopeptide repeat domain
PPR PF01535 491 - 521 2.5e-06 PPR repeat
E_motif PF20431 606 - 668 5.3e-24 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0017201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G39350
fragaria_vesca FvH4_6g47350
malus_domestica MD09G1062000.v1.1
prunus_persica Prupe.3G258100_v2.0.a1
pyrus_communis pycom111g05230
rosa_chinensis RchiOBHm_Chr2g0166381
rosa_laevigata RLG00000021616
rosa_multiflora Rmu_sc0003016.1_g000010
rosa_roxburghii Rroxscaffold_2G00084920
rosa_rugosa Rorug02G0522600
rosa_samantha Rh2BG600800 Rh2CG571500
rosa_wichuraiana Rw2G049070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 249
Acc16I TGCGCA 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 1712
AccI GTMKAC 1 cut(s) 1110
AccII CGCG 1 cut(s) 470
AccIII TCCGGA 1 cut(s) 343
AciI CCGC 4 cut(s) 132, 742, 1034, 1913
AclI AACGTT 1 cut(s) 1670
AclWI GGATC 1 cut(s) 434
AcoI YGGCCR 1 cut(s) 145
AcuI CTGAAG 1 cut(s) 906
AcvI CACGTG 1 cut(s) 858
AfaI GTAC 3 cut(s) 269, 788, 1188
AfiI CCNNNNNNNGG 4 cut(s) 683, 1161, 1347, 1500
AflIII ACRYGT 2 cut(s) 468, 1105
AgeI ACCGGT 1 cut(s) 1154
AjiI CACGTC 1 cut(s) 121
AjnI CCWGG 2 cut(s) 1443, 1984
AjuI GAANNNNNNNTTGG 4 cut(s) 392, 424, 758, 790
Alw26I GTCTC 1 cut(s) 1280
AlwI GGATC 1 cut(s) 434
Aor13HI TCCGGA 1 cut(s) 343
AoxI GGCC 1 cut(s) 145
ApeKI GCWGC 6 cut(s) 77, 377, 1292, 1370, 1802, 1844
AsiGI ACCGGT 1 cut(s) 1154
Asp700I GAANNNNTTC 3 cut(s) 212, 1548, 2014
AspLEI GCGC 1 cut(s) 18
AspS9I GGNCC 1 cut(s) 1157
AsuC2I CCSGG 1 cut(s) 1348
AsuHPI GGTGA 7 cut(s) 118, 775, 790, 1001, 1015, 1048, 1957
AsuII TTCGAA 1 cut(s) 1142
AvaII GGWCC 1 cut(s) 1157
BanII GRGCYC 1 cut(s) 1254
BbrPI CACGTG 1 cut(s) 858
BbvI GCAGC 6 cut(s) 89, 364, 1304, 1357, 1789, 1856
BciT130I CCWGG 2 cut(s) 1445, 1986
BclI TGATCA 2 cut(s) 852, 1080
BcnI CCSGG 1 cut(s) 1348
BcoDI GTCTC 1 cut(s) 1280
BfmI CTRYAG 2 cut(s) 963, 1374
BfuAI ACCTGC 1 cut(s) 1712
BisI GCNGC 7 cut(s) 78, 378, 1293, 1371, 1803, 1845, 1914
BlsI GCNGC 7 cut(s) 79, 379, 1294, 1372, 1804, 1846, 1915
Bme1390I CCNGG 3 cut(s) 1348, 1445, 1986
Bme18I GGWCC 1 cut(s) 1157
BmgBI CACGTC 1 cut(s) 121
BmgT120I GGNCC 1 cut(s) 1157
BmiI GGNNCC 2 cut(s) 1251, 1869
BmrFI CCNGG 3 cut(s) 1348, 1445, 1986
BmsI GCATC 8 cut(s) 283, 592, 918, 982, 1198, 1221, 1357, 1494
BpmI CTGGAG 1 cut(s) 402
Bpu14I TTCGAA 1 cut(s) 1142
BpuEI CTTGAG 1 cut(s) 451
BpuMI CCSGG 1 cut(s) 1348
Bsa29I ATCGAT 1 cut(s) 395
BsaAI YACGTR 2 cut(s) 271, 858
BsaJI CCNNGG 2 cut(s) 1160, 1711
BsaWI WCCGGW 2 cut(s) 343, 1154
Bsc4I CCNNNNNNNGG 4 cut(s) 683, 1161, 1347, 1500
Bse118I RCCGGY 2 cut(s) 128, 1154
Bse3DI GCAATG 2 cut(s) 1323, 1327
BseAI TCCGGA 1 cut(s) 343
BseBI CCWGG 2 cut(s) 1445, 1986
BseCI ATCGAT 1 cut(s) 395
BseDI CCNNGG 2 cut(s) 1160, 1711
BseGI GGATG 9 cut(s) 321, 352, 523, 630, 814, 840, 853, 1236, 1509
BseLI CCNNNNNNNGG 4 cut(s) 683, 1161, 1347, 1500
BseMI GCAATG 2 cut(s) 1323, 1327
BseRI GAGGAG 1 cut(s) 448
BseXI GCAGC 6 cut(s) 89, 364, 1304, 1357, 1789, 1856
BsgI GTGCAG 1 cut(s) 482
Bsh1236I CGCG 1 cut(s) 470
Bsh1285I CGRYCG 1 cut(s) 136
BshFI GGCC 1 cut(s) 147
BshTI ACCGGT 1 cut(s) 1154
BshVI ATCGAT 1 cut(s) 395
BsiEI CGRYCG 1 cut(s) 136
BsiSI CCGG 6 cut(s) 129, 144, 344, 1155, 1347, 1494
BslI CCNNNNNNNGG 4 cut(s) 683, 1161, 1347, 1500
BsmAI GTCTC 1 cut(s) 1280
BsmI GAATGC 2 cut(s) 775, 1603
BsnI GGCC 1 cut(s) 147
Bsp119I TTCGAA 1 cut(s) 1142
Bsp1286I GDGCHC 1 cut(s) 1254
Bsp13I TCCGGA 1 cut(s) 343
Bsp1407I TGTACA 1 cut(s) 1186
Bsp143I GATC 8 cut(s) 426, 643, 852, 1080, 1553, 1679, 1705, 2004
BspACI CCGC 4 cut(s) 132, 742, 1034, 1913
BspANI GGCC 1 cut(s) 147
BspDI ATCGAT 1 cut(s) 395
BspEI TCCGGA 1 cut(s) 343
BspFNI CGCG 1 cut(s) 470
BspLI GGNNCC 2 cut(s) 1251, 1869
BspMI ACCTGC 1 cut(s) 1712
BspPI GGATC 1 cut(s) 434
BspT104I TTCGAA 1 cut(s) 1142
BsrDI GCAATG 2 cut(s) 1323, 1327
BsrFI RCCGGY 2 cut(s) 128, 1154
BsrGI TGTACA 1 cut(s) 1186
BssAI RCCGGY 2 cut(s) 128, 1154
BssECI CCNNGG 2 cut(s) 1160, 1711
BssMI GATC 8 cut(s) 426, 643, 852, 1080, 1553, 1679, 1705, 2004
BssT1I CCWWGG 2 cut(s) 1160, 1711
Bst2UI CCWGG 2 cut(s) 1445, 1986
Bst4CI ACNGT 4 cut(s) 542, 1028, 1274, 1783
Bst6I CTCTTC 1 cut(s) 729
BstAUI TGTACA 1 cut(s) 1186
BstBAI YACGTR 2 cut(s) 271, 858
BstBI TTCGAA 1 cut(s) 1142
BstC8I GCNNGC 2 cut(s) 1603, 1800
BstDEI CTNAG 1 cut(s) 35
BstF5I GGATG 9 cut(s) 321, 352, 523, 630, 814, 840, 853, 1236, 1509
BstFNI CGCG 1 cut(s) 470
BstHHI GCGC 1 cut(s) 18
BstKTI GATC 8 cut(s) 429, 646, 855, 1083, 1556, 1682, 1708, 2007
BstMAI GTCTC 1 cut(s) 1280
BstMBI GATC 8 cut(s) 426, 643, 852, 1080, 1553, 1679, 1705, 2004
BstMCI CGRYCG 1 cut(s) 136
BstMWI GCNNNNNNNGC 8 cut(s) 29, 377, 476, 1175, 1292, 1298, 1598, 1799
BstNI CCWGG 2 cut(s) 1445, 1986
BstNSI RCATGY 1 cut(s) 1090
BstSCI CCNGG 3 cut(s) 1346, 1443, 1984
BstSFI CTRYAG 2 cut(s) 963, 1374
BstUI CGCG 1 cut(s) 470
BstV1I GCAGC 6 cut(s) 89, 364, 1304, 1357, 1789, 1856
BstX2I RGATCY 1 cut(s) 426
BstYI RGATCY 1 cut(s) 426
Bsu15I ATCGAT 1 cut(s) 395
BsuRI GGCC 1 cut(s) 147
BsuTUI ATCGAT 1 cut(s) 395
BtgZI GCGATG 1 cut(s) 494
BtrI CACGTC 1 cut(s) 121
BtsCI GGATG 9 cut(s) 321, 352, 523, 630, 814, 840, 853, 1236, 1509
BtsI GCAGTG 1 cut(s) 112
BtsIMutI CAGTG 1 cut(s) 112
BveI ACCTGC 1 cut(s) 1712
Cac8I GCNNGC 2 cut(s) 1603, 1800
CfoI GCGC 1 cut(s) 18
Cfr10I RCCGGY 2 cut(s) 128, 1154
Cfr13I GGNCC 1 cut(s) 1157
ClaI ATCGAT 1 cut(s) 395
CseI GACGC 2 cut(s) 31, 1298
CsiI ACCWGGT 1 cut(s) 1984
Csp6I GTAC 3 cut(s) 268, 787, 1187
CspAI ACCGGT 1 cut(s) 1154
CviAII CATG 8 cut(s) 419, 653, 1087, 1388, 1540, 1651, 1817, 1954
CviQI GTAC 3 cut(s) 268, 787, 1187
DdeI CTNAG 1 cut(s) 35
DpnI GATC 8 cut(s) 428, 645, 854, 1082, 1555, 1681, 1707, 2006
DpnII GATC 8 cut(s) 426, 643, 852, 1080, 1553, 1679, 1705, 2004
EaeI YGGCCR 1 cut(s) 145
Eam1104I CTCTTC 1 cut(s) 729
EarI CTCTTC 1 cut(s) 729
Eco130I CCWWGG 2 cut(s) 1160, 1711
Eco24I GRGCYC 1 cut(s) 1254
Eco32I GATATC 1 cut(s) 1060
Eco47I GGWCC 1 cut(s) 1157
Eco57I CTGAAG 1 cut(s) 906
Eco72I CACGTG 1 cut(s) 858
EcoRII CCWGG 2 cut(s) 1443, 1984
EcoRV GATATC 1 cut(s) 1060
EcoT14I CCWWGG 2 cut(s) 1160, 1711
EcoT38I GRGCYC 1 cut(s) 1254
ErhI CCWWGG 2 cut(s) 1160, 1711
FaeI CATG 8 cut(s) 422, 656, 1090, 1391, 1543, 1654, 1820, 1957
FatI CATG 8 cut(s) 418, 652, 1086, 1387, 1539, 1650, 1816, 1953
FauNDI CATATG 1 cut(s) 1288
FbaI TGATCA 2 cut(s) 852, 1080
FblI GTMKAC 1 cut(s) 1110
Fnu4HI GCNGC 7 cut(s) 78, 378, 1293, 1371, 1803, 1845, 1914
FokI GGATG 9 cut(s) 328, 359, 530, 637, 821, 847, 860, 1243, 1516
FriOI GRGCYC 1 cut(s) 1254
Fsp4HI GCNGC 7 cut(s) 78, 378, 1293, 1371, 1803, 1845, 1914
FspI TGCGCA 1 cut(s) 17
GlaI GCGC 1 cut(s) 17
GluI GCNGC 7 cut(s) 78, 378, 1293, 1371, 1803, 1845, 1914
GsuI CTGGAG 1 cut(s) 402
HaeIII GGCC 1 cut(s) 147
HapII CCGG 6 cut(s) 129, 144, 344, 1155, 1347, 1494
HgaI GACGC 2 cut(s) 31, 1298
HhaI GCGC 1 cut(s) 18
Hin1II CATG 8 cut(s) 422, 656, 1090, 1391, 1543, 1654, 1820, 1957
Hin6I GCGC 1 cut(s) 16
HinP1I GCGC 1 cut(s) 16
HincII GTYRAC 1 cut(s) 1779
HindII GTYRAC 1 cut(s) 1779
HindIII AAGCTT 2 cut(s) 105, 1737
HinfI GANTC 4 cut(s) 67, 160, 1415, 1440
HpaII CCGG 6 cut(s) 129, 144, 344, 1155, 1347, 1494
HphI GGTGA 7 cut(s) 118, 775, 790, 1001, 1015, 1048, 1957
Hpy166II GTNNAC 6 cut(s) 861, 1022, 1111, 1187, 1393, 1779
Hpy188I TCNGA 2 cut(s) 1057, 2009
Hpy188III TCNNGA 7 cut(s) 64, 157, 290, 344, 430, 647, 2002
Hpy8I GTNNAC 6 cut(s) 861, 1022, 1111, 1187, 1393, 1779
Hpy99I CGWCG 1 cut(s) 1239
HpyAV CCTTC 9 cut(s) 272, 493, 688, 837, 932, 994, 1289, 1622, 1936
HpyCH4III ACNGT 4 cut(s) 542, 1028, 1274, 1783
HpyCH4IV ACGT 6 cut(s) 120, 270, 857, 1105, 1670, 1775
HpyF10VI GCNNNNNNNGC 8 cut(s) 29, 377, 476, 1175, 1292, 1298, 1598, 1799
HpyF3I CTNAG 1 cut(s) 35
HpySE526I ACGT 6 cut(s) 120, 270, 857, 1105, 1670, 1775
Hsp92II CATG 8 cut(s) 422, 656, 1090, 1391, 1543, 1654, 1820, 1957
HspAI GCGC 1 cut(s) 16
Kpn2I TCCGGA 1 cut(s) 343
Ksp22I TGATCA 2 cut(s) 852, 1080
Kzo9I GATC 8 cut(s) 426, 643, 852, 1080, 1553, 1679, 1705, 2004
LmnI GCTCC 1 cut(s) 1249
Lsp1109I GCAGC 6 cut(s) 89, 364, 1304, 1357, 1789, 1856
LweI GCATC 8 cut(s) 283, 592, 918, 982, 1198, 1221, 1357, 1494
MabI ACCWGGT 1 cut(s) 1984
MaeII ACGT 6 cut(s) 120, 270, 857, 1105, 1670, 1775
MaeIII GTNAC 6 cut(s) 169, 188, 686, 958, 1561, 1810
MalI GATC 8 cut(s) 428, 645, 854, 1082, 1555, 1681, 1707, 2006
MboI GATC 8 cut(s) 426, 643, 852, 1080, 1553, 1679, 1705, 2004
MboII GAAGA 6 cut(s) 547, 746, 778, 899, 1253, 1637
MflI RGATCY 1 cut(s) 426
MhlI GDGCHC 1 cut(s) 1254
MluCI AATT 7 cut(s) 90, 386, 401, 756, 1170, 1758, 2014
MluI ACGCGT 1 cut(s) 468
MlyI GAGTC 1 cut(s) 154
MmeI TCCRAC 1 cut(s) 1948
MroI TCCGGA 1 cut(s) 343
MroXI GAANNNNTTC 3 cut(s) 212, 1548, 2014
MseI TTAA 6 cut(s) 333, 608, 630, 873, 1268, 1487
MslI CAYNNNNRTG 3 cut(s) 1512, 1544, 1821
MspI CCGG 6 cut(s) 129, 144, 344, 1155, 1347, 1494
MspR9I CCNGG 3 cut(s) 1348, 1445, 1986
Mva1269I GAATGC 2 cut(s) 775, 1603
MvaI CCWGG 2 cut(s) 1445, 1986
MvnI CGCG 1 cut(s) 470
MwoI GCNNNNNNNGC 8 cut(s) 29, 377, 476, 1175, 1292, 1298, 1598, 1799
NciI CCSGG 1 cut(s) 1348
NdeI CATATG 1 cut(s) 1288
NdeII GATC 8 cut(s) 426, 643, 852, 1080, 1553, 1679, 1705, 2004
NlaIII CATG 8 cut(s) 422, 656, 1090, 1391, 1543, 1654, 1820, 1957
NlaIV GGNNCC 2 cut(s) 1251, 1869
NmuCI GTSAC 4 cut(s) 188, 686, 958, 1810
NsbI TGCGCA 1 cut(s) 17
NspI RCATGY 1 cut(s) 1090
NspV TTCGAA 1 cut(s) 1142
PcsI WCGNNNNNNNCGW 2 cut(s) 560, 1139
PctI GAATGC 2 cut(s) 775, 1603
PdmI GAANNNNTTC 3 cut(s) 212, 1548, 2014
PfeI GAWTC 3 cut(s) 67, 1415, 1440
PfoI TCCNGGA 1 cut(s) 1443
PinAI ACCGGT 1 cut(s) 1154
PkrI GCNGC 7 cut(s) 79, 379, 1294, 1372, 1804, 1846, 1915
PleI GAGTC 1 cut(s) 154
PmaCI CACGTG 1 cut(s) 858
PmlI CACGTG 1 cut(s) 858
PpsI GAGTC 1 cut(s) 154
Ppu21I YACGTR 2 cut(s) 271, 858
PsiI TTATAA 1 cut(s) 249
Psp1406I AACGTT 1 cut(s) 1670
Psp6I CCWGG 2 cut(s) 1443, 1984
PspCI CACGTG 1 cut(s) 858
PspGI CCWGG 2 cut(s) 1443, 1984
PspN4I GGNNCC 2 cut(s) 1251, 1869
PspPI GGNCC 1 cut(s) 1157
PsuI RGATCY 1 cut(s) 426
RsaI GTAC 3 cut(s) 269, 788, 1188
RsaNI GTAC 3 cut(s) 268, 787, 1187
RseI CAYNNNNRTG 3 cut(s) 1512, 1544, 1821
SaqAI TTAA 6 cut(s) 333, 608, 630, 873, 1268, 1487
SatI GCNGC 7 cut(s) 78, 378, 1293, 1371, 1803, 1845, 1914
Sau3AI GATC 8 cut(s) 426, 643, 852, 1080, 1553, 1679, 1705, 2004
Sau96I GGNCC 1 cut(s) 1157
SchI GAGTC 1 cut(s) 154
ScrFI CCNGG 3 cut(s) 1348, 1445, 1986
SduI GDGCHC 1 cut(s) 1254
SexAI ACCWGGT 1 cut(s) 1984
SfaNI GCATC 8 cut(s) 283, 592, 918, 982, 1198, 1221, 1357, 1494
SfcI CTRYAG 2 cut(s) 963, 1374
SfuI TTCGAA 1 cut(s) 1142
SgrAI CRCCGGYG 1 cut(s) 128
SinI GGWCC 1 cut(s) 1157
SmiMI CAYNNNNRTG 3 cut(s) 1512, 1544, 1821
SmlI CTYRAG 1 cut(s) 430
SmoI CTYRAG 1 cut(s) 430
Sse9I AATT 7 cut(s) 90, 386, 401, 756, 1170, 1758, 2014
SsiI CCGC 4 cut(s) 132, 742, 1034, 1913
SspI AATATT 1 cut(s) 1258
StyD4I CCNGG 3 cut(s) 1346, 1443, 1984
StyI CCWWGG 2 cut(s) 1160, 1711
TaaI ACNGT 4 cut(s) 542, 1028, 1274, 1783
TaiI ACGT 6 cut(s) 123, 273, 860, 1108, 1673, 1778
TaqI TCGA 9 cut(s) 136, 158, 216, 395, 1142, 1552, 1717, 1860, 2001
TasI AATT 7 cut(s) 90, 386, 401, 756, 1170, 1758, 2014
TatI WGTACW 2 cut(s) 786, 1186
TauI GCSGC 1 cut(s) 1916
TfiI GAWTC 3 cut(s) 67, 1415, 1440
Tru1I TTAA 6 cut(s) 333, 608, 630, 873, 1268, 1487
Tru9I TTAA 6 cut(s) 333, 608, 630, 873, 1268, 1487
TscAI CASTG 1 cut(s) 119
TseFI GTSAC 4 cut(s) 188, 686, 958, 1810
TseI GCWGC 6 cut(s) 77, 377, 1292, 1370, 1802, 1844
Tsp45I GTSAC 4 cut(s) 188, 686, 958, 1810
TspGWI ACGGA 5 cut(s) 157, 220, 891, 1243, 1524
TspRI CASTG 1 cut(s) 119
VpaK11BI GGWCC 1 cut(s) 1157
XceI RCATGY 1 cut(s) 1090
XmiI GTMKAC 1 cut(s) 1110
XmnI GAANNNNTTC 3 cut(s) 212, 1548, 2014
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.