Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0017201

Physical Location & Seq

Genomic Coordinates Forward (+)

82124019 .. 82126596

Gene Structure 2578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG600800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGAGCGGCCCATCTCAAGCTTTGACTAAAGCCAAGGACGTCCTCACTGCCACTGCAACCCAATTCCACTCACTGCTCCACCACCTCACCGCCACTCCGTCCCTCACCAAAACCAAGCAGCTCCATGCCCACACCATCACATCAGGCTCACACTCCCCCTACGTCAGCTCAAACCTTGCGAAACTATACGCCTTATGTAGCCACCTCCAATATGCACGTAAGCTGTTCGACGAAATGCCTGACCGGAGATCATTCCTGTACAACGCCGTGATAAGAATGTACGTCAAAAATGGCTTACCACATGAGGCACTGAGCGTGTTTGTGCAAATGGTGGATTTGGGTACGTGCCGGCCGGATAGGTTTACGTACCCTGGTGTTGTTAAGGCGTGTAGTGACTTGTCATTGGTGGGTGTTGGGGTTCTTGTTCATGGACGGATTGTGGTTGATGGGTTTGGCATGGATGTGTTTGTTATGAACGCTTTGCTGGCAATGTATATGAGTTGTGGGGAGAGGGATATGGCGAGGAGGGTTTTCGATGCAATGCAGGAACGAAGCGTGGTGTCTTGGAACACCATGATTAGTGGTTACTTTAGGAATGGGTGTGCGAGGGAGGCTTTGAGTGTTTTTGAGTGGATGATGAATGAGGGCGTGGAACCTGATTGTGCCACTTTGGTTTCCTTGTTACCGGTTATTGGTTCCTTGAGGTCTAAGGTATTGGGAAGATGTGTTCATGCCTTTGTGGAAGAGAAGGGTTTGGGGAAAAATTTGGTACTGAGGAATGCACTGGTGGATATGTATATTAGGTGCGGTAGCATGAACGAGGCGCGAGTTGTTTTTGAAAACATGGGTGAGAGGGATGTGGTGACATGGAGTACTATGATCAATGGGTATATTTTGAGCGGTGAACCAAGAGGTGCATTGGCACTTTGTTGGCTGATGCAGTGTGAAGGTGTAAAGCCAAATTCTGTAACAATAGCTTCTCTACTTTCGGCCTGTGGGAGTTTGCATCTTTTAAAGCAAGGAAAGTGCTTGCATGGGTGGACTATTAGGCAAAAGCTTGAGTCTGATGTTATGGTGGTGACTGCTTTAATTGACATGTATTCGAAAAGCACTTGTATTGATCAGAGCTTTCAAGTGTTTGCAAAGACTTCAAAAAAGAAAACCGTTCCCTGGAATTCGATAATTTCTGGATGCATTCACAATAGTCTTGCCATAGAAGCAATAGAATTTTTCAAACAGATGCTGGTGGAAGCCGTACAACCCAATGAAGCAACCCTGAATAGTCTCCTTCCTGCGTATTCCATTCTTGCTGATTTACATCAAGCAATGAATATACATGGTTACCTAGTGAGATCTGGGTTTCTTTCATGCATTGAAGTTGCTACTGGTTTGATTGATTCATACTCAAAGGCTGGAAGTTTAGAATATGCTCACATAACTTTCAATGGAATTTCAGAGAAGCACAGGGATATTGTTCTATGGAGTGTGATAATAGCTGGTTACGGAACACATGGCCATGGCAAGATTGCTGTTTCACTTTTCTATCAGATGGTGCAATCTGGGGTGCGACCAAACGAGGTCACTTTTACCTCTGTTCTGCATGCTTGCAGCCATGCTGGTTTGGTGGATGAGGGCTTGGGGTTATTCATATTCATGCTTAAAGATCCGAAACTGATTCCCAAGGCTGATCACTACACATGCATTATTGATCTTCTTGGTCGTGCAGGTCGATTGGCAGAAGCTTATGATCTTATTAGAACAATGCCATTTCAGCCTCATCATGCTATTTGGGGTGCACTACTTGGTGCCTGTGTGATACATGATAATGTTGAACTAGGAGAGGTTGCTGCTAAGTGGCTTTTTGAGCTTGAGCCAGAAAACACAGGAAACTATATATTGATGGCAAAAATTTATGCTGCAGTGGGAAGATGGAAAGATGCAGAAACTGTGAGACATATGATGAACGAAATAGGGTTAAGAAAATCAGCAGCTCACAGTCTAGTAATCTTAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cofilin_ADF PPR PPR_2

Protein Analysis

671

Amino Acids

74.1

Weight (kDa)

7.84

Isoelectric Point (pI)

35.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	85 - 131	8.1e-08	PPR repeat family
PPR	PF01535	86 - 114	9.6e-07	PPR repeat
PPR_2	PF13041	185 - 228	4.2e-12	PPR repeat family
PPR	PF01535	187 - 217	2.9e-07	PPR repeat
PPR_2	PF13041	285 - 332	4.8e-09	PPR repeat family
PPR_2	PF13041	388 - 433	7.8e-07	PPR repeat family
PPR_2	PF13041	489 - 537	2.2e-11	PPR repeat family
E_motif	PF20431	607 - 662	4e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017201)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G39350
fragaria_vesca	FvH4_6g47350
malus_domestica	MD09G1062000.v1.1
prunus_persica	Prupe.3G258100_v2.0.a1
pyrus_communis	pycom111g05230
rosa_chinensis	RchiOBHm_Chr2g0166381
rosa_laevigata	RLG00000021616
rosa_multiflora	Rmu_sc0003016.1_g000010
rosa_roxburghii	Rroxscaffold_2G00084920
rosa_rugosa	Rorug02G0522600
rosa_samantha	Rh2BG600800 Rh2CG571500
rosa_wichuraiana	Rw2G049070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	42
Acc36I	ACCTGC	1 cut(s)	1715
AccB1I	GGYRCC	1 cut(s)	1805
AccBSI	CCGCTC	2 cut(s)	6, 900
AccII	CGCG	1 cut(s)	826
AciI	CCGC	4 cut(s)	6, 90, 807, 900
AclWI	GGATC	1 cut(s)	1658
AcoI	YGGCCR	2 cut(s)	350, 1513
AcsI	RAATTY	6 cut(s)	763, 961, 1174, 1226, 1449, 1908
AcyI	GRCGYC	1 cut(s)	39
AfaI	GTAC	7 cut(s)	260, 281, 343, 368, 771, 874, 1257
AfiI	CCNNNNNNNGG	2 cut(s)	692, 1170
AflIII	ACRYGT	1 cut(s)	1095
AgeI	ACCGGT	1 cut(s)	685
AgsI	TTSAA	7 cut(s)	839, 1133, 1152, 1234, 1376, 1444, 1832
AjnI	CCWGG	2 cut(s)	370, 1169
AloI	GAACNNNNNNTCC	2 cut(s)	711, 743
Alw21I	GWGCWC	1 cut(s)	1798
Alw26I	GTCTC	2 cut(s)	1289, 1945
Alw44I	GTGCAC	1 cut(s)	1794
AlwI	GGATC	1 cut(s)	1658
AlwNI	CAGNNNCTG	2 cut(s)	1243, 1946
AoxI	GGCC	4 cut(s)	7, 350, 990, 1513
ApaLI	GTGCAC	1 cut(s)	1794
ApeKI	GCWGC	5 cut(s)	118, 1608, 1847, 1916, 1988
ApoI	RAATTY	6 cut(s)	763, 961, 1174, 1226, 1449, 1908
AsiGI	ACCGGT	1 cut(s)	685
AspLEI	GCGC	1 cut(s)	826
AspS9I	GGNCC	1 cut(s)	8
AsuHPI	GGTGA	6 cut(s)	79, 97, 860, 874, 914, 1090
AsuII	TTCGAA	1 cut(s)	1103
BaeGI	GKGCMC	1 cut(s)	1798
BalI	TGGCCA	1 cut(s)	1515
BanI	GGYRCC	1 cut(s)	1805
Bbv12I	GWGCWC	1 cut(s)	1798
BbvI	GCAGC	5 cut(s)	130, 1620, 1834, 1903, 2000
BccI	CCATC	6 cut(s)	19, 143, 440, 1543, 1894, 1923
BceAI	ACGGC	2 cut(s)	251, 1238
BciT130I	CCWGG	2 cut(s)	372, 1171
BclI	TGATCA	3 cut(s)	879, 1120, 1687
BcoDI	GTCTC	2 cut(s)	1289, 1945
BfaI	CTAG	3 cut(s)	1346, 1835, 2000
BfmI	CTRYAG	1 cut(s)	1917
BfuAI	ACCTGC	1 cut(s)	1715
BglII	AGATCT	1 cut(s)	1352
BisI	GCNGC	6 cut(s)	7, 119, 1609, 1848, 1917, 1989
BlsI	GCNGC	6 cut(s)	8, 120, 1610, 1849, 1918, 1990
BmcAI	AGTACT	1 cut(s)	874
Bme1390I	CCNGG	2 cut(s)	372, 1171
BmgT120I	GGNCC	1 cut(s)	8
BmiI	GGNNCC	3 cut(s)	654, 697, 1807
BmrFI	CCNGG	2 cut(s)	372, 1171
BmsI	GCATC	6 cut(s)	526, 927, 1015, 1181, 1230, 1927
Bpu14I	TTCGAA	1 cut(s)	1103
BpuEI	CTTGAG	3 cut(s)	721, 1079, 1889
BsaAI	YACGTR	3 cut(s)	218, 345, 366
BsaBI	GATNNNNATC	1 cut(s)	1317
BsaHI	GRCGYC	1 cut(s)	39
BsaJI	CCNNGG	5 cut(s)	33, 370, 1169, 1516, 1680
BsaWI	WCCGGW	2 cut(s)	243, 685
BsaXI	ACNNNNNCTCC	2 cut(s)	79, 109
Bsc4I	CCNNNNNNNGG	2 cut(s)	692, 1170
Bse118I	RCCGGY	2 cut(s)	348, 685
Bse1I	ACTGG	2 cut(s)	789, 1390
Bse3DI	GCAATG	3 cut(s)	495, 546, 1332
Bse8I	GATNNNNATC	1 cut(s)	1317
BseBI	CCWGG	2 cut(s)	372, 1171
BseDI	CCNNGG	5 cut(s)	33, 370, 1169, 1516, 1680
BseGI	GGATG	5 cut(s)	466, 639, 862, 1196, 1633
BseJI	GATNNNNATC	1 cut(s)	1317
BseLI	CCNNNNNNNGG	2 cut(s)	692, 1170
BseMI	GCAATG	3 cut(s)	495, 546, 1332
BseMII	CTCAG	2 cut(s)	302, 764
BseNI	ACTGG	2 cut(s)	789, 1390
BseRI	GAGGAG	1 cut(s)	538
BseSI	GKGCMC	1 cut(s)	1798
BseX3I	CGGCCG	1 cut(s)	350
BseXI	GCAGC	5 cut(s)	130, 1620, 1834, 1903, 2000
BsgI	GTGCAG	1 cut(s)	1743
Bsh1236I	CGCG	1 cut(s)	826
Bsh1285I	CGRYCG	1 cut(s)	353
BshFI	GGCC	4 cut(s)	9, 352, 992, 1515
BshNI	GGYRCC	1 cut(s)	1805
BshTI	ACCGGT	1 cut(s)	685
BsiEI	CGRYCG	1 cut(s)	353
BsiHKAI	GWGCWC	1 cut(s)	1798
BsiSI	CCGG	4 cut(s)	244, 349, 353, 686
BslFI	GGGAC	1 cut(s)	85
BslI	CCNNNNNNNGG	2 cut(s)	692, 1170
BsmAI	GTCTC	2 cut(s)	1289, 1945
BsmFI	GGGAC	1 cut(s)	85
BsmI	GAATGC	2 cut(s)	784, 1194
BsnI	GGCC	4 cut(s)	9, 352, 992, 1515
Bsp119I	TTCGAA	1 cut(s)	1103
Bsp1286I	GDGCHC	1 cut(s)	1798
Bsp1407I	TGTACA	1 cut(s)	258
Bsp143I	GATC	8 cut(s)	248, 879, 1120, 1352, 1663, 1687, 1708, 1747
Bsp19I	CCATGG	1 cut(s)	1516
BspACI	CCGC	4 cut(s)	6, 90, 807, 900
BspANI	GGCC	4 cut(s)	9, 352, 992, 1515
BspCNI	CTCAG	2 cut(s)	303, 765
BspFNI	CGCG	1 cut(s)	826
BspLI	GGNNCC	3 cut(s)	654, 697, 1807
BspMAI	CTGCAG	1 cut(s)	1921
BspMI	ACCTGC	1 cut(s)	1715
BspPI	GGATC	1 cut(s)	1658
BspT104I	TTCGAA	1 cut(s)	1103
BspT107I	GGYRCC	1 cut(s)	1805
BsrBI	CCGCTC	2 cut(s)	6, 900
BsrDI	GCAATG	3 cut(s)	495, 546, 1332
BsrFI	RCCGGY	2 cut(s)	348, 685
BsrGI	TGTACA	1 cut(s)	258
BsrI	ACTGG	2 cut(s)	789, 1390
BssAI	RCCGGY	2 cut(s)	348, 685
BssECI	CCNNGG	5 cut(s)	33, 370, 1169, 1516, 1680
BssMI	GATC	8 cut(s)	248, 879, 1120, 1352, 1663, 1687, 1708, 1747
BssNI	GRCGYC	1 cut(s)	39
BssT1I	CCWWGG	3 cut(s)	33, 1516, 1680
Bst2UI	CCWGG	2 cut(s)	372, 1171
Bst4CI	ACNGT	3 cut(s)	1165, 1948, 1997
Bst6I	CTCTTC	1 cut(s)	738
BstACI	GRCGYC	1 cut(s)	39
BstAUI	TGTACA	1 cut(s)	258
BstBAI	YACGTR	3 cut(s)	218, 345, 366
BstBI	TTCGAA	1 cut(s)	1103
BstC8I	GCNNGC	5 cut(s)	350, 486, 1031, 1602, 1606
BstDEI	CTNAG	4 cut(s)	311, 708, 773, 1851
BstDSI	CCRYGG	1 cut(s)	1516
BstEII	GGTNACC	1 cut(s)	1340
BstF5I	GGATG	5 cut(s)	466, 639, 862, 1196, 1633
BstFNI	CGCG	1 cut(s)	826
BstHHI	GCGC	1 cut(s)	826
BstKTI	GATC	8 cut(s)	251, 882, 1123, 1355, 1666, 1690, 1711, 1750
BstMAI	GTCTC	2 cut(s)	1289, 1945
BstMBI	GATC	8 cut(s)	248, 879, 1120, 1352, 1663, 1687, 1708, 1747
BstMCI	CGRYCG	1 cut(s)	353
BstMWI	GCNNNNNNNGC	5 cut(s)	485, 611, 1217, 1771, 1864
BstNI	CCWGG	2 cut(s)	372, 1171
BstNSI	RCATGY	3 cut(s)	1099, 1604, 1701
BstPI	GGTNACC	1 cut(s)	1340
BstSCI	CCNGG	2 cut(s)	370, 1169
BstSFI	CTRYAG	1 cut(s)	1917
BstSLI	GKGCMC	1 cut(s)	1798
BstSNI	TACGTA	1 cut(s)	366
BstUI	CGCG	1 cut(s)	826
BstV1I	GCAGC	5 cut(s)	130, 1620, 1834, 1903, 2000
BstX2I	RGATCY	2 cut(s)	1352, 1663
BstYI	RGATCY	2 cut(s)	1352, 1663
BstZI	CGGCCG	1 cut(s)	350
BsuRI	GGCC	4 cut(s)	9, 352, 992, 1515
BtgI	CCRYGG	1 cut(s)	1516
BtsCI	GGATG	5 cut(s)	466, 639, 862, 1196, 1633
BtsI	GCAGTG	5 cut(s)	45, 51, 71, 947, 1926
BtsIMutI	CAGTG	7 cut(s)	45, 51, 71, 308, 782, 947, 1926
BveI	ACCTGC	1 cut(s)	1715
Cac8I	GCNNGC	5 cut(s)	350, 486, 1031, 1602, 1606
CaiI	CAGNNNCTG	2 cut(s)	1243, 1946
CfoI	GCGC	1 cut(s)	826
Cfr10I	RCCGGY	2 cut(s)	348, 685
Cfr13I	GGNCC	1 cut(s)	8
Csp6I	GTAC	7 cut(s)	259, 280, 342, 367, 770, 873, 1256
CspAI	ACCGGT	1 cut(s)	685
CviQI	GTAC	7 cut(s)	259, 280, 342, 367, 770, 873, 1256
DdeI	CTNAG	4 cut(s)	311, 708, 773, 1851
DpnI	GATC	8 cut(s)	250, 881, 1122, 1354, 1665, 1689, 1710, 1749
DpnII	GATC	8 cut(s)	248, 879, 1120, 1352, 1663, 1687, 1708, 1747
DraI	TTTAAA	1 cut(s)	1014
EaeI	YGGCCR	2 cut(s)	350, 1513
EagI	CGGCCG	1 cut(s)	350
Eam1104I	CTCTTC	1 cut(s)	738
EarI	CTCTTC	1 cut(s)	738
EclXI	CGGCCG	1 cut(s)	350
Eco105I	TACGTA	1 cut(s)	366
Eco130I	CCWWGG	3 cut(s)	33, 1516, 1680
Eco52I	CGGCCG	1 cut(s)	350
Eco91I	GGTNACC	1 cut(s)	1340
EcoO65I	GGTNACC	1 cut(s)	1340
EcoRI	GAATTC	1 cut(s)	1174
EcoRII	CCWGG	2 cut(s)	370, 1169
EcoT14I	CCWWGG	3 cut(s)	33, 1516, 1680
EcoT22I	ATGCAT	3 cut(s)	1196, 1373, 1703
ErhI	CCWWGG	3 cut(s)	33, 1516, 1680
FaqI	GGGAC	1 cut(s)	85
FauNDI	CATATG	1 cut(s)	1956
FbaI	TGATCA	3 cut(s)	879, 1120, 1687
Fnu4HI	GCNGC	6 cut(s)	7, 119, 1609, 1848, 1917, 1989
FokI	GGATG	5 cut(s)	473, 646, 869, 1203, 1640
Fsp4HI	GCNGC	6 cut(s)	7, 119, 1609, 1848, 1917, 1989
FspBI	CTAG	3 cut(s)	1346, 1835, 2000
GlaI	GCGC	1 cut(s)	825
GluI	GCNGC	6 cut(s)	7, 119, 1609, 1848, 1917, 1989
HaeIII	GGCC	4 cut(s)	9, 352, 992, 1515
HapII	CCGG	4 cut(s)	244, 349, 353, 686
HhaI	GCGC	1 cut(s)	826
Hin1I	GRCGYC	1 cut(s)	39
Hin6I	GCGC	1 cut(s)	824
HinP1I	GCGC	1 cut(s)	824
HindIII	AAGCTT	3 cut(s)	18, 1055, 1740
HinfI	GANTC	3 cut(s)	1061, 1397, 1675
HpaII	CCGG	4 cut(s)	244, 349, 353, 686
HphI	GGTGA	6 cut(s)	79, 97, 860, 874, 914, 1090
Hpy166II	GTNNAC	4 cut(s)	363, 905, 1041, 1796
Hpy188I	TCNGA	5 cut(s)	1066, 1125, 1456, 1548, 1668
Hpy188III	TCNNGA	1 cut(s)	1188
Hpy8I	GTNNAC	4 cut(s)	363, 905, 1041, 1796
Hpy99I	CGWCG	1 cut(s)	233
HpyAV	CCTTC	3 cut(s)	742, 941, 1298
HpyCH4III	ACNGT	3 cut(s)	1165, 1948, 1997
HpyCH4IV	ACGT	6 cut(s)	39, 162, 217, 282, 344, 365
HpyF10VI	GCNNNNNNNGC	5 cut(s)	485, 611, 1217, 1771, 1864
HpyF3I	CTNAG	4 cut(s)	311, 708, 773, 1851
HpySE526I	ACGT	6 cut(s)	39, 162, 217, 282, 344, 365
Hsp92I	GRCGYC	1 cut(s)	39
HspAI	GCGC	1 cut(s)	824
KroI	GCCGGC	1 cut(s)	348
KroNI	GCCGGC	1 cut(s)	350
Ksp22I	TGATCA	3 cut(s)	879, 1120, 1687
Kzo9I	GATC	8 cut(s)	248, 879, 1120, 1352, 1663, 1687, 1708, 1747
LmnI	GCTCC	2 cut(s)	81, 126
Lsp1109I	GCAGC	5 cut(s)	130, 1620, 1834, 1903, 2000
LweI	GCATC	6 cut(s)	526, 927, 1015, 1181, 1230, 1927
MaeI	CTAG	3 cut(s)	1346, 1835, 2000
MaeII	ACGT	6 cut(s)	39, 162, 217, 282, 344, 365
MaeIII	GTNAC	9 cut(s)	392, 584, 681, 862, 967, 1078, 1340, 1499, 1579
MalI	GATC	8 cut(s)	250, 881, 1122, 1354, 1665, 1689, 1710, 1749
MbiI	CCGCTC	2 cut(s)	6, 900
MboI	GATC	8 cut(s)	248, 879, 1120, 1352, 1663, 1687, 1708, 1747
MboII	GAAGA	4 cut(s)	732, 755, 1703, 1938
MflI	RGATCY	2 cut(s)	1352, 1663
MhlI	GDGCHC	1 cut(s)	1798
MlsI	TGGCCA	1 cut(s)	1515
MluCI	AATT	9 cut(s)	62, 763, 961, 1089, 1174, 1182, 1226, 1449, 1908
MluNI	TGGCCA	1 cut(s)	1515
MlyI	GAGTC	1 cut(s)	1070
Mox20I	TGGCCA	1 cut(s)	1515
Mph1103I	ATGCAT	3 cut(s)	1196, 1373, 1703
MroNI	GCCGGC	1 cut(s)	348
MscI	TGGCCA	1 cut(s)	1515
MseI	TTAA	6 cut(s)	381, 1013, 1088, 1659, 1976, 2009
MslI	CAYNNNNRTG	4 cut(s)	461, 1515, 1652, 1824
Msp20I	TGGCCA	1 cut(s)	1515
MspI	CCGG	4 cut(s)	244, 349, 353, 686
MspR9I	CCNGG	2 cut(s)	372, 1171
Mva1269I	GAATGC	2 cut(s)	784, 1194
MvaI	CCWGG	2 cut(s)	372, 1171
MvnI	CGCG	1 cut(s)	826
MwoI	GCNNNNNNNGC	5 cut(s)	485, 611, 1217, 1771, 1864
NaeI	GCCGGC	1 cut(s)	350
NcoI	CCATGG	1 cut(s)	1516
NdeI	CATATG	1 cut(s)	1956
NdeII	GATC	8 cut(s)	248, 879, 1120, 1352, 1663, 1687, 1708, 1747
NgoMIV	GCCGGC	1 cut(s)	348
NlaIV	GGNNCC	3 cut(s)	654, 697, 1807
NmuCI	GTSAC	4 cut(s)	392, 862, 1078, 1579
NsiI	ATGCAT	3 cut(s)	1196, 1373, 1703
NspI	RCATGY	3 cut(s)	1099, 1604, 1701
NspV	TTCGAA	1 cut(s)	1103
PaeI	GCATGC	1 cut(s)	1604
PciI	ACATGT	1 cut(s)	1095
PcsI	WCGNNNNNNNCGW	1 cut(s)	1726
PctI	GAATGC	2 cut(s)	784, 1194
PdiI	GCCGGC	1 cut(s)	350
PfeI	GAWTC	2 cut(s)	1397, 1675
PinAI	ACCGGT	1 cut(s)	685
PkrI	GCNGC	6 cut(s)	8, 120, 1610, 1849, 1918, 1990
PleI	GAGTC	1 cut(s)	1069
PpsI	GAGTC	1 cut(s)	1069
Ppu21I	YACGTR	3 cut(s)	218, 345, 366
PscI	ACATGT	1 cut(s)	1095
Psp6I	CCWGG	2 cut(s)	370, 1169
PspEI	GGTNACC	1 cut(s)	1340
PspGI	CCWGG	2 cut(s)	370, 1169
PspN4I	GGNNCC	3 cut(s)	654, 697, 1807
PspPI	GGNCC	1 cut(s)	8
PstI	CTGCAG	1 cut(s)	1921
PstNI	CAGNNNCTG	2 cut(s)	1243, 1946
PsuI	RGATCY	2 cut(s)	1352, 1663
RsaI	GTAC	7 cut(s)	260, 281, 343, 368, 771, 874, 1257
RsaNI	GTAC	7 cut(s)	259, 280, 342, 367, 770, 873, 1256
RseI	CAYNNNNRTG	4 cut(s)	461, 1515, 1652, 1824
SaqAI	TTAA	6 cut(s)	381, 1013, 1088, 1659, 1976, 2009
SatI	GCNGC	6 cut(s)	7, 119, 1609, 1848, 1917, 1989
Sau3AI	GATC	8 cut(s)	248, 879, 1120, 1352, 1663, 1687, 1708, 1747
Sau96I	GGNCC	1 cut(s)	8
ScaI	AGTACT	1 cut(s)	874
SchI	GAGTC	1 cut(s)	1070
ScrFI	CCNGG	2 cut(s)	372, 1171
SduI	GDGCHC	1 cut(s)	1798
SfaNI	GCATC	6 cut(s)	526, 927, 1015, 1181, 1230, 1927
SfcI	CTRYAG	1 cut(s)	1917
SfuI	TTCGAA	1 cut(s)	1103
SmiMI	CAYNNNNRTG	4 cut(s)	461, 1515, 1652, 1824
SmlI	CTYRAG	4 cut(s)	15, 700, 1058, 1868
SmoI	CTYRAG	4 cut(s)	15, 700, 1058, 1868
SnaBI	TACGTA	1 cut(s)	366
SphI	GCATGC	1 cut(s)	1604
Sse9I	AATT	9 cut(s)	62, 763, 961, 1089, 1174, 1182, 1226, 1449, 1908
SsiI	CCGC	4 cut(s)	6, 90, 807, 900
SspMI	CTAG	3 cut(s)	1346, 1835, 2000
StyD4I	CCNGG	2 cut(s)	370, 1169
StyI	CCWWGG	3 cut(s)	33, 1516, 1680
TaaI	ACNGT	3 cut(s)	1165, 1948, 1997
TaiI	ACGT	6 cut(s)	42, 165, 220, 285, 347, 368
TaqI	TCGA	5 cut(s)	228, 534, 1103, 1178, 1729
TasI	AATT	9 cut(s)	62, 763, 961, 1089, 1174, 1182, 1226, 1449, 1908
TatI	WGTACW	2 cut(s)	258, 872
TauI	GCSGC	1 cut(s)	9
TfiI	GAWTC	2 cut(s)	1397, 1675
Tru1I	TTAA	6 cut(s)	381, 1013, 1088, 1659, 1976, 2009
Tru9I	TTAA	6 cut(s)	381, 1013, 1088, 1659, 1976, 2009
TscAI	CASTG	7 cut(s)	52, 58, 78, 315, 789, 947, 1926
TseFI	GTSAC	4 cut(s)	392, 862, 1078, 1579
TseI	GCWGC	5 cut(s)	118, 1608, 1847, 1916, 1988
Tsp45I	GTSAC	4 cut(s)	392, 862, 1078, 1579
TspGWI	ACGGA	3 cut(s)	87, 448, 1518
TspRI	CASTG	7 cut(s)	52, 58, 78, 315, 789, 947, 1926
VneI	GTGCAC	1 cut(s)	1794
XapI	RAATTY	6 cut(s)	763, 961, 1174, 1226, 1449, 1908
XceI	RCATGY	3 cut(s)	1099, 1604, 1701
XspI	CTAG	3 cut(s)	1346, 1835, 2000
ZraI	GACGTC	1 cut(s)	40
ZrmI	AGTACT	1 cut(s)	874
Zsp2I	ATGCAT	3 cut(s)	1196, 1373, 1703

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.