Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0017201

Physical Location & Seq

Genomic Coordinates Forward (+)

35904241 .. 35906588

Gene Structure 2348 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g47350.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGAGCAGTCTATCTCAAGCTTTGACAAAAGCCAAGGAAGTCCTAACTGCCACTGCAACCCAATTCCACTCACTGCTCCACCACCTCACCGCCACTCCATCCCTCACCAAAACCAAGCAGCTCCATGCCCACACCATCACATCAGGCACACACTCACCTTACGTCAGCTCAAACCTTGCAAAACTATACGCCTTATGTAGCCACCTCCAATATGCACGTAAGCTGTTCGACGAAATGCCTGACCGGAAACCATTCTTGTACAACGCCCTGATTAGAATGTACGTCAAAAATGGCTTACCACGTGAGGCAATGCACGTGTTTGTGCAAATGTTGGCTTCGGGCACGTGCCGGCCGGATCGGTATACCTACCCTGCTGTTGTGAAGGCGTGTAGTGACTTGTCAGTGGTGGGAGCTGGGGTTGTTGTTCATGGGAAGATAGTGGTTGATGGGTTTGGGTTGGAAATGTTTGTTATGAACGGTTTGCTGGCAATGTATATGGGATTTGGGGAGAGGGATATGGCGAGGAGGGTTTTCGATGCAATGCAGGAACGAGATGTGGTGTCTTGGAACACTATGATTAGCGGGTACTTTAGAAATGGCTGCACGAGGGAGGCTTTGAGTGTTTTTGGAAGGATGATGAATGAGGGCGTGGAGCCTGATCGTGCTACTTTGGTCTCCTTGTTGCCGGTTATTGGTTCCTTGAAGTGTAAGGTATTGGGGAGACGGGTTCATGCCTTTGTGGAAGAGATGGGTTTGGGGAAGAATTTGGCGCTGAGGAATGCGCTGGTGGATATGTATATAAAGTGTGGTGGCATGAATGAGGCGCGAGTTGTTTTTGAGAACATGGCTGAGAGGGATGTGGTGACATGGACAACTATGATCAATGGGTATATTTTGAGTGGTGAACCAAGAGGTGCATTGGCACTTTGTTGGATGATGCAGTGTGATGGTGTAAAACCAAATTCTGTGACAATTGCTTCTCTACTTTCGGCCTGTGGGAGTTTGCGTCTTTTAGAGCAAGGAAAGTGCTTGCATGGGTGGACTATTAGGCAAAAGCTTGAGTCTGATGTTATAGTGGTGACTGCTTTAATCGACATGTATTCGAAAAGCAATAGTTTGAATCAGAGCTTTCAAGTGTTTGTAAAGACTTCAAAAAAGAGAACAGTTCCCTGGAATTCGATAATATCTGGATGCATTCACAATAGTTTGGCCAGAGACGCAATAGAACTTTTCAAACAGATGCTGGTGGAAGCCGTGAAACCAAATGAAGCAACCTTGAATTGTCTCCTTCCTGCGTATTCCATTCTTGTTGATTTACATCAAACCATGAATATACATGGTTACCTAGTAAGATCTGGGTTTCTTTCATGCATTGAAGTTGCTACTGGTTTGATTGATGCATACTCAAAGGGTGGAAGTTTAGAGTATGCTTACAAGACTTTCAATGGAATTTCAGAGAAGGACAGGGATATTGTTCTATGGAGTGTGATAATAGCTGGTTATGGAACACATGGCCATGGCAAGACTGCTCTTTCACTTTTCTATCAGATGGTTCAATCTGGGGTGAGACCAAACGAGGTCACATTTACCTCTGTCCTGCATGCTTGCAGCCATGCTGGTTTGGTGGAAGAAGGGTTGGAGTTGTTCAGATTCATGCTTAACGATCAGAAATTGATTCCTAACGCTGATCACTACACATGCATTGTCGATCTTCTTGGTCGTGCAGGTCGTTTAGTTGAAGCTTATGATCTTATTAGAACAATGTCATTTCAGCCTAATCATGCTATTTGGGGTGCAATACTCGGCGCATGTGTGATACATGATAATGTTGAACTGGGAGAGGTTGCTGCTAAATGGCTTTTTGAGCTTGATCCAGAAAACACAGGCAACTATGTATTGATGGCAAAAATTTATGCTGCAGCTGGAAGATGGAAAGATGCAGAAAATGTGAGATATACGATGAACGAAATAGGATTAAGAAAATCACCTGCTCACAGTCTAGTTGATGTCAGAAACAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cofilin_ADF PPR PPR_2

Protein Analysis

674

Amino Acids

74.64

Weight (kDa)

8.45

Isoelectric Point (pI)

32.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	86 - 131	2.3e-08	PPR repeat family
PPR	PF01535	86 - 114	2e-06	PPR repeat
PPR_1	PF12854	183 - 212	5e-06	PPR repeat
PPR_2	PF13041	184 - 228	1.8e-11	PPR repeat family
PPR	PF01535	187 - 217	1.3e-09	PPR repeat
PPR_2	PF13041	285 - 332	1.1e-09	PPR repeat family
PPR_2	PF13041	388 - 433	3.1e-08	PPR repeat family
PPR_2	PF13041	489 - 537	9.1e-12	PPR repeat family
E_motif	PF20431	607 - 668	5.9e-19	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017201)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G39350
fragaria_vesca	FvH4_6g47350
malus_domestica	MD09G1062000.v1.1
prunus_persica	Prupe.3G258100_v2.0.a1
pyrus_communis	pycom111g05230
rosa_chinensis	RchiOBHm_Chr2g0166381
rosa_laevigata	RLG00000021616
rosa_multiflora	Rmu_sc0003016.1_g000010
rosa_roxburghii	Rroxscaffold_2G00084920
rosa_rugosa	Rorug02G0522600
rosa_samantha	Rh2BG600800 Rh2CG571500
rosa_wichuraiana	Rw2G049070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1996
Acc36I	ACCTGC	2 cut(s)	1715, 1996
AccI	GTMKAC	1 cut(s)	362
AccII	CGCG	1 cut(s)	826
AciI	CCGC	2 cut(s)	90, 582
AclWI	GGATC	2 cut(s)	363, 1865
AcoI	YGGCCR	3 cut(s)	350, 1209, 1513
AcsI	RAATTY	5 cut(s)	763, 961, 1174, 1449, 1908
AcvI	CACGTG	3 cut(s)	302, 316, 345
AfaI	GTAC	3 cut(s)	260, 281, 587
AfiI	CCNNNNNNNGG	1 cut(s)	692
AflIII	ACRYGT	2 cut(s)	315, 1095
AjnI	CCWGG	1 cut(s)	1169
Alw26I	GTCTC	5 cut(s)	679, 715, 1209, 1289, 1561
AlwI	GGATC	2 cut(s)	363, 1865
AlwNI	CAGNNNCTG	1 cut(s)	1243
AoxI	GGCC	4 cut(s)	350, 990, 1209, 1513
ApeKI	GCWGC	6 cut(s)	118, 600, 1608, 1847, 1916, 1919
ApoI	RAATTY	5 cut(s)	763, 961, 1174, 1449, 1908
Asp700I	GAANNNNTTC	1 cut(s)	251
AspLEI	GCGC	4 cut(s)	772, 784, 826, 1808
AsuHPI	GGTGA	8 cut(s)	79, 97, 147, 874, 914, 1090, 1576, 1977
AsuII	TTCGAA	1 cut(s)	1103
BaeGI	GKGCMC	1 cut(s)	344
BalI	TGGCCA	2 cut(s)	1211, 1515
BauI	CACGAG	1 cut(s)	604
BbrPI	CACGTG	3 cut(s)	302, 316, 345
BbvCI	CCTCAGC	1 cut(s)	773
BbvI	GCAGC	6 cut(s)	130, 587, 1620, 1834, 1903, 1931
BccI	CCATC	8 cut(s)	106, 143, 440, 742, 941, 1543, 1894, 1923
BceAI	ACGGC	1 cut(s)	1238
BciT130I	CCWGG	1 cut(s)	1171
BclI	TGATCA	2 cut(s)	879, 1687
BcoDI	GTCTC	5 cut(s)	679, 715, 1209, 1289, 1561
BfaI	CTAG	2 cut(s)	1346, 2000
BfmI	CTRYAG	1 cut(s)	1917
BfoI	RGCGCY	1 cut(s)	773
BfuAI	ACCTGC	2 cut(s)	1715, 1996
BglII	AGATCT	1 cut(s)	1352
BisI	GCNGC	6 cut(s)	119, 601, 1609, 1848, 1917, 1920
BlsI	GCNGC	6 cut(s)	120, 602, 1610, 1849, 1918, 1921
Bme1390I	CCNGG	1 cut(s)	1171
BmiI	GGNNCC	2 cut(s)	654, 697
BmrFI	CCNGG	1 cut(s)	1171
BmrI	ACTGGG	1 cut(s)	1844
BmsI	GCATC	6 cut(s)	526, 927, 1181, 1230, 1387, 1927
BmuI	ACTGGG	1 cut(s)	1844
Bpu10I	CCTNAGC	1 cut(s)	773
Bpu14I	TTCGAA	1 cut(s)	1103
BpuEI	CTTGAG	1 cut(s)	1079
BsaAI	YACGTR	4 cut(s)	218, 302, 316, 345
BsaBI	GATNNNNATC	1 cut(s)	1317
BsaI	GGTCTC	2 cut(s)	679, 1561
BsaJI	CCNNGG	3 cut(s)	33, 1169, 1516
BsaWI	WCCGGW	1 cut(s)	243
BsaXI	ACNNNNNCTCC	6 cut(s)	79, 109, 402, 432, 991, 1021
Bsc4I	CCNNNNNNNGG	1 cut(s)	692
Bse118I	RCCGGY	2 cut(s)	348, 685
Bse1I	ACTGG	2 cut(s)	1390, 1839
Bse3DI	GCAATG	3 cut(s)	315, 495, 546
Bse8I	GATNNNNATC	1 cut(s)	1317
BseBI	CCWGG	1 cut(s)	1171
BseDI	CCNNGG	3 cut(s)	33, 1169, 1516
BseGI	GGATG	5 cut(s)	98, 639, 862, 939, 1196
BseJI	GATNNNNATC	1 cut(s)	1317
BseLI	CCNNNNNNNGG	1 cut(s)	692
BseMI	GCAATG	3 cut(s)	315, 495, 546
BseMII	CTCAG	2 cut(s)	764, 840
BseNI	ACTGG	2 cut(s)	1390, 1839
BseRI	GAGGAG	1 cut(s)	538
BseSI	GKGCMC	1 cut(s)	344
BseX3I	CGGCCG	1 cut(s)	350
BseXI	GCAGC	6 cut(s)	130, 587, 1620, 1834, 1903, 1931
BseYI	CCCAGC	1 cut(s)	413
BsgI	GTGCAG	2 cut(s)	586, 1743
Bsh1236I	CGCG	1 cut(s)	826
Bsh1285I	CGRYCG	1 cut(s)	353
BshFI	GGCC	4 cut(s)	352, 992, 1211, 1515
BsiEI	CGRYCG	1 cut(s)	353
BsiSI	CCGG	4 cut(s)	244, 349, 353, 686
BslI	CCNNNNNNNGG	1 cut(s)	692
BsmAI	GTCTC	5 cut(s)	679, 715, 1209, 1289, 1561
BsmBI	CGTCTC	2 cut(s)	715, 1209
BsmI	GAATGC	2 cut(s)	784, 1194
BsnI	GGCC	4 cut(s)	352, 992, 1211, 1515
Bso31I	GGTCTC	2 cut(s)	679, 1561
Bsp119I	TTCGAA	1 cut(s)	1103
Bsp1286I	GDGCHC	1 cut(s)	344
Bsp1407I	TGTACA	1 cut(s)	258
Bsp143I	GATC	9 cut(s)	355, 658, 879, 1352, 1663, 1687, 1708, 1747, 1870
Bsp19I	CCATGG	1 cut(s)	1516
BspACI	CCGC	2 cut(s)	90, 582
BspANI	GGCC	4 cut(s)	352, 992, 1211, 1515
BspCNI	CTCAG	2 cut(s)	765, 841
BspFNI	CGCG	1 cut(s)	826
BspLI	GGNNCC	2 cut(s)	654, 697
BspMAI	CTGCAG	1 cut(s)	1921
BspMI	ACCTGC	2 cut(s)	1715, 1996
BspPI	GGATC	2 cut(s)	363, 1865
BspT104I	TTCGAA	1 cut(s)	1103
BspTNI	GGTCTC	2 cut(s)	679, 1561
BsrDI	GCAATG	3 cut(s)	315, 495, 546
BsrFI	RCCGGY	2 cut(s)	348, 685
BsrGI	TGTACA	1 cut(s)	258
BsrI	ACTGG	2 cut(s)	1390, 1839
BssAI	RCCGGY	2 cut(s)	348, 685
BssECI	CCNNGG	3 cut(s)	33, 1169, 1516
BssMI	GATC	9 cut(s)	355, 658, 879, 1352, 1663, 1687, 1708, 1747, 1870
BssNAI	GTATAC	1 cut(s)	363
BssSI	CACGAG	1 cut(s)	604
BssT1I	CCWWGG	2 cut(s)	33, 1516
Bst1107I	GTATAC	1 cut(s)	363
Bst2BI	CACGAG	1 cut(s)	604
Bst2UI	CCWGG	1 cut(s)	1171
Bst4CI	ACNGT	3 cut(s)	479, 1165, 1997
Bst6I	CTCTTC	1 cut(s)	738
BstAUI	TGTACA	1 cut(s)	258
BstBAI	YACGTR	4 cut(s)	218, 302, 316, 345
BstBI	TTCGAA	1 cut(s)	1103
BstC8I	GCNNGC	5 cut(s)	350, 486, 1031, 1602, 1606
BstDEI	CTNAG	2 cut(s)	773, 849
BstDSI	CCRYGG	1 cut(s)	1516
BstEII	GGTNACC	1 cut(s)	1340
BstF5I	GGATG	5 cut(s)	98, 639, 862, 939, 1196
BstFNI	CGCG	1 cut(s)	826
BstH2I	RGCGCY	1 cut(s)	773
BstHHI	GCGC	4 cut(s)	772, 784, 826, 1808
BstKTI	GATC	9 cut(s)	358, 661, 882, 1355, 1666, 1690, 1711, 1750, 1873
BstMAI	GTCTC	5 cut(s)	679, 715, 1209, 1289, 1561
BstMBI	GATC	9 cut(s)	355, 658, 879, 1352, 1663, 1687, 1708, 1747, 1870
BstMCI	CGRYCG	1 cut(s)	353
BstMWI	GCNNNNNNNGC	2 cut(s)	1217, 1864
BstNI	CCWGG	1 cut(s)	1171
BstNSI	RCATGY	4 cut(s)	1099, 1604, 1701, 1812
BstPI	GGTNACC	1 cut(s)	1340
BstSCI	CCNGG	1 cut(s)	1169
BstSFI	CTRYAG	1 cut(s)	1917
BstSLI	GKGCMC	1 cut(s)	344
BstUI	CGCG	1 cut(s)	826
BstV1I	GCAGC	6 cut(s)	130, 587, 1620, 1834, 1903, 1931
BstX2I	RGATCY	1 cut(s)	1352
BstYI	RGATCY	1 cut(s)	1352
BstZ17I	GTATAC	1 cut(s)	363
BstZI	CGGCCG	1 cut(s)	350
BsuRI	GGCC	4 cut(s)	352, 992, 1211, 1515
BtgI	CCRYGG	1 cut(s)	1516
BtsCI	GGATG	5 cut(s)	98, 639, 862, 939, 1196
BtsI	GCAGTG	3 cut(s)	51, 71, 947
BtsIMutI	CAGTG	4 cut(s)	51, 71, 408, 947
BveI	ACCTGC	2 cut(s)	1715, 1996
Cac8I	GCNNGC	5 cut(s)	350, 486, 1031, 1602, 1606
CaiI	CAGNNNCTG	1 cut(s)	1243
CfoI	GCGC	4 cut(s)	772, 784, 826, 1808
Cfr10I	RCCGGY	2 cut(s)	348, 685
CseI	GACGC	2 cut(s)	995, 1226
Csp6I	GTAC	3 cut(s)	259, 280, 586
CviQI	GTAC	3 cut(s)	259, 280, 586
DdeI	CTNAG	2 cut(s)	773, 849
DpnI	GATC	9 cut(s)	357, 660, 881, 1354, 1665, 1689, 1710, 1749, 1872
DpnII	GATC	9 cut(s)	355, 658, 879, 1352, 1663, 1687, 1708, 1747, 1870
EaeI	YGGCCR	3 cut(s)	350, 1209, 1513
EagI	CGGCCG	1 cut(s)	350
Eam1104I	CTCTTC	1 cut(s)	738
EarI	CTCTTC	1 cut(s)	738
EclXI	CGGCCG	1 cut(s)	350
Eco130I	CCWWGG	2 cut(s)	33, 1516
Eco31I	GGTCTC	2 cut(s)	679, 1561
Eco52I	CGGCCG	1 cut(s)	350
Eco72I	CACGTG	3 cut(s)	302, 316, 345
Eco91I	GGTNACC	1 cut(s)	1340
EcoO65I	GGTNACC	1 cut(s)	1340
EcoRI	GAATTC	1 cut(s)	1174
EcoRII	CCWGG	1 cut(s)	1169
EcoT14I	CCWWGG	2 cut(s)	33, 1516
EcoT22I	ATGCAT	4 cut(s)	1196, 1373, 1402, 1703
ErhI	CCWWGG	2 cut(s)	33, 1516
Esp3I	CGTCTC	2 cut(s)	715, 1209
FauI	CCCGC	1 cut(s)	575
FbaI	TGATCA	2 cut(s)	879, 1687
FblI	GTMKAC	1 cut(s)	362
Fnu4HI	GCNGC	6 cut(s)	119, 601, 1609, 1848, 1917, 1920
FokI	GGATG	5 cut(s)	85, 646, 869, 946, 1203
Fsp4HI	GCNGC	6 cut(s)	119, 601, 1609, 1848, 1917, 1920
FspBI	CTAG	2 cut(s)	1346, 2000
GlaI	GCGC	4 cut(s)	771, 783, 825, 1807
GluI	GCNGC	6 cut(s)	119, 601, 1609, 1848, 1917, 1920
GsaI	CCCAGC	1 cut(s)	417
HaeII	RGCGCY	1 cut(s)	773
HaeIII	GGCC	4 cut(s)	352, 992, 1211, 1515
HapII	CCGG	4 cut(s)	244, 349, 353, 686
HgaI	GACGC	2 cut(s)	995, 1226
HhaI	GCGC	4 cut(s)	772, 784, 826, 1808
Hin6I	GCGC	4 cut(s)	770, 782, 824, 1806
HinP1I	GCGC	4 cut(s)	770, 782, 824, 1806
HindIII	AAGCTT	3 cut(s)	18, 1055, 1740
HinfI	GANTC	4 cut(s)	1061, 1120, 1650, 1675
HpaII	CCGG	4 cut(s)	244, 349, 353, 686
HphI	GGTGA	8 cut(s)	79, 97, 147, 874, 914, 1090, 1576, 1977
Hpy166II	GTNNAC	3 cut(s)	363, 905, 1041
Hpy188I	TCNGA	7 cut(s)	1066, 1125, 1456, 1548, 1649, 1668, 2012
Hpy188III	TCNNGA	2 cut(s)	1188, 1874
Hpy8I	GTNNAC	3 cut(s)	363, 905, 1041
Hpy99I	CGWCG	1 cut(s)	233
HpyAV	CCTTC	5 cut(s)	376, 624, 1298, 1453, 1625
HpyCH4III	ACNGT	3 cut(s)	479, 1165, 1997
HpyCH4IV	ACGT	6 cut(s)	162, 217, 282, 301, 315, 344
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1217, 1864
HpyF3I	CTNAG	2 cut(s)	773, 849
HpySE526I	ACGT	6 cut(s)	162, 217, 282, 301, 315, 344
HspAI	GCGC	4 cut(s)	770, 782, 824, 1806
KroI	GCCGGC	1 cut(s)	348
KroNI	GCCGGC	1 cut(s)	350
Ksp22I	TGATCA	2 cut(s)	879, 1687
Kzo9I	GATC	9 cut(s)	355, 658, 879, 1352, 1663, 1687, 1708, 1747, 1870
LmnI	GCTCC	4 cut(s)	81, 126, 410, 652
Lsp1109I	GCAGC	6 cut(s)	130, 587, 1620, 1834, 1903, 1931
LweI	GCATC	6 cut(s)	526, 927, 1181, 1230, 1387, 1927
MaeI	CTAG	2 cut(s)	1346, 2000
MaeII	ACGT	6 cut(s)	162, 217, 282, 301, 315, 344
MaeIII	GTNAC	6 cut(s)	392, 862, 967, 1078, 1340, 1579
MalI	GATC	9 cut(s)	357, 660, 881, 1354, 1665, 1689, 1710, 1749, 1872
MboI	GATC	9 cut(s)	355, 658, 879, 1352, 1663, 1687, 1708, 1747, 1870
MboII	GAAGA	6 cut(s)	445, 755, 772, 1640, 1703, 1938
MfeI	CAATTG	1 cut(s)	972
MflI	RGATCY	1 cut(s)	1352
MhlI	GDGCHC	1 cut(s)	344
MlsI	TGGCCA	2 cut(s)	1211, 1515
MluCI	AATT	9 cut(s)	62, 763, 961, 972, 1174, 1279, 1449, 1670, 1908
MluNI	TGGCCA	2 cut(s)	1211, 1515
MlyI	GAGTC	1 cut(s)	1070
MmeI	TCCRAC	3 cut(s)	438, 911, 1617
Mox20I	TGGCCA	2 cut(s)	1211, 1515
Mph1103I	ATGCAT	4 cut(s)	1196, 1373, 1402, 1703
MroNI	GCCGGC	1 cut(s)	348
MroXI	GAANNNNTTC	1 cut(s)	251
MscI	TGGCCA	2 cut(s)	1211, 1515
MseI	TTAA	3 cut(s)	1088, 1659, 1976
MslI	CAYNNNNRTG	2 cut(s)	1515, 1824
Msp20I	TGGCCA	2 cut(s)	1211, 1515
MspA1I	CMGCKG	1 cut(s)	1922
MspI	CCGG	4 cut(s)	244, 349, 353, 686
MspR9I	CCNGG	1 cut(s)	1171
MunI	CAATTG	1 cut(s)	972
Mva1269I	GAATGC	2 cut(s)	784, 1194
MvaI	CCWGG	1 cut(s)	1171
MvnI	CGCG	1 cut(s)	826
MwoI	GCNNNNNNNGC	2 cut(s)	1217, 1864
NaeI	GCCGGC	1 cut(s)	350
NcoI	CCATGG	1 cut(s)	1516
NdeII	GATC	9 cut(s)	355, 658, 879, 1352, 1663, 1687, 1708, 1747, 1870
NgoMIV	GCCGGC	1 cut(s)	348
NlaIV	GGNNCC	2 cut(s)	654, 697
NmeAIII	GCCGAG	1 cut(s)	1782
NmuCI	GTSAC	5 cut(s)	392, 862, 967, 1078, 1579
NsiI	ATGCAT	4 cut(s)	1196, 1373, 1402, 1703
NspI	RCATGY	4 cut(s)	1099, 1604, 1701, 1812
NspV	TTCGAA	1 cut(s)	1103
PaeI	GCATGC	1 cut(s)	1604
PaqCI	CACCTGC	1 cut(s)	1996
PciI	ACATGT	1 cut(s)	1095
PcsI	WCGNNNNNNNCGW	1 cut(s)	1726
PctI	GAATGC	2 cut(s)	784, 1194
PdiI	GCCGGC	1 cut(s)	350
PdmI	GAANNNNTTC	1 cut(s)	251
PfeI	GAWTC	3 cut(s)	1120, 1650, 1675
PkrI	GCNGC	6 cut(s)	120, 602, 1610, 1849, 1918, 1921
PleI	GAGTC	1 cut(s)	1069
PmaCI	CACGTG	3 cut(s)	302, 316, 345
PmlI	CACGTG	3 cut(s)	302, 316, 345
PpsI	GAGTC	1 cut(s)	1069
Ppu21I	YACGTR	4 cut(s)	218, 302, 316, 345
PscI	ACATGT	1 cut(s)	1095
Psp6I	CCWGG	1 cut(s)	1169
PspCI	CACGTG	3 cut(s)	302, 316, 345
PspEI	GGTNACC	1 cut(s)	1340
PspFI	CCCAGC	1 cut(s)	413
PspGI	CCWGG	1 cut(s)	1169
PspN4I	GGNNCC	2 cut(s)	654, 697
PstI	CTGCAG	1 cut(s)	1921
PstNI	CAGNNNCTG	1 cut(s)	1243
PsuI	RGATCY	1 cut(s)	1352
PvuII	CAGCTG	1 cut(s)	1922
RsaI	GTAC	3 cut(s)	260, 281, 587
RsaNI	GTAC	3 cut(s)	259, 280, 586
RseI	CAYNNNNRTG	2 cut(s)	1515, 1824
SaqAI	TTAA	3 cut(s)	1088, 1659, 1976
SatI	GCNGC	6 cut(s)	119, 601, 1609, 1848, 1917, 1920
Sau3AI	GATC	9 cut(s)	355, 658, 879, 1352, 1663, 1687, 1708, 1747, 1870
SchI	GAGTC	1 cut(s)	1070
ScrFI	CCNGG	1 cut(s)	1171
SduI	GDGCHC	1 cut(s)	344
SfaNI	GCATC	6 cut(s)	526, 927, 1181, 1230, 1387, 1927
SfcI	CTRYAG	1 cut(s)	1917
SfuI	TTCGAA	1 cut(s)	1103
SmiMI	CAYNNNNRTG	2 cut(s)	1515, 1824
SmlI	CTYRAG	2 cut(s)	15, 1058
SmoI	CTYRAG	2 cut(s)	15, 1058
SphI	GCATGC	1 cut(s)	1604
Sse9I	AATT	9 cut(s)	62, 763, 961, 972, 1174, 1279, 1449, 1670, 1908
SsiI	CCGC	2 cut(s)	90, 582
SspMI	CTAG	2 cut(s)	1346, 2000
StyD4I	CCNGG	1 cut(s)	1169
StyI	CCWWGG	2 cut(s)	33, 1516
TaaI	ACNGT	3 cut(s)	479, 1165, 1997
TaiI	ACGT	6 cut(s)	165, 220, 285, 304, 318, 347
TaqI	TCGA	6 cut(s)	228, 534, 1092, 1103, 1178, 1707
TasI	AATT	9 cut(s)	62, 763, 961, 972, 1174, 1279, 1449, 1670, 1908
TatI	WGTACW	1 cut(s)	258
TfiI	GAWTC	3 cut(s)	1120, 1650, 1675
Tru1I	TTAA	3 cut(s)	1088, 1659, 1976
Tru9I	TTAA	3 cut(s)	1088, 1659, 1976
TscAI	CASTG	4 cut(s)	58, 78, 408, 947
TseFI	GTSAC	5 cut(s)	392, 862, 967, 1078, 1579
TseI	GCWGC	6 cut(s)	118, 600, 1608, 1847, 1916, 1919
Tsp45I	GTSAC	5 cut(s)	392, 862, 967, 1078, 1579
TspRI	CASTG	4 cut(s)	58, 78, 408, 947
XapI	RAATTY	5 cut(s)	763, 961, 1174, 1449, 1908
XceI	RCATGY	4 cut(s)	1099, 1604, 1701, 1812
XmiI	GTMKAC	1 cut(s)	362
XmnI	GAANNNNTTC	1 cut(s)	251
XspI	CTAG	2 cut(s)	1346, 2000
Zsp2I	ATGCAT	4 cut(s)	1196, 1373, 1402, 1703

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.