AT5G43920

Transducin family protein WD-40 repeat family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0015082
Physical Location & Seq
Forward (+)
17672628 .. 17676023
3396 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G43920.1

Sequence Viewer

Length: 1572 bp
ATGGAGAATGGGTTATGGGAGGTTTTAGGTTCAAAAGGGTTGTTGAAGAAACATGAATTCATTAGGATTTTGGTTCAATGCTTATACTCGTTAGGATTCAAGAACTCTGCTTCTTGTCTGGAATTCGAGTCAAAGATCTTGTATAAAACAGCTGATTCTGAGTTTCTTGAAAAGCAAGTTTTGAGTGGGAACTGGGATAGTTGCGTACAGGTTCTAGACAGAATTTTTGATAATTCCATGGATGATACGAGGAACACGGCTTTATATCTAGTGTTCAAGCAATGTTTGTTGGAGTATTTGAAACGTGGGGATGTTTCTTTGGCCTTGAATGTGTTACGGAAGCAAGCTCCGTTGTTACGGATGGGAAAAGAGAAGATTCATAGGCTTGCTTGTGATATTGTTTATTCGAAAGAGATGGAATCCGGTGAAGTAGACAACTGTTTAGTTCTAGATTTGAGGAGAAAGTTGTTGGTTGAACTGGAGAAGTTGATTCCCTTGCCAATTGTTATTCCTGAGAGAAGGTTGGAACATTTGGTTGAGACTGCTGTGATGGACCAGATTGATACGTGTATGTATCATAACTCATGTGATGCAGTATCGCTTTACAAGGATCACTGTTGCGGTAGAGACCAAATTCCTTCAGAGACAGTCCAGATTTTGGTGGCACACAAAAATGAAGTGTGGTTTGTGCAATTCTCTAATAGTGGCAAATATCTGGCCACTGCATCAAGCGATTGTACAGCTATAATATGGAAGGTACTGGATGACAACAAAGTCGAACTGAAGCACACACTTGAGAGCCACCAAAATCCAGTTTCTTTTGTCTCGTGGAGTCCTGACGATACTAAACTGCTTACATGCGGAAACGCTGAGGTTCTTAAGCTATGGGATGTTGACACAGGTGTGTTGAGACACACATTTGGAAACAACAATACTGGATTCACTGTCAGCTCTTGCGCATGGTTCCCTGACTCAACTCGGCTTGTCTGTGGCAGTTCTGACCCAGAAAGAGGGATTGTAATGTGGGACACTGATGGAAACGAGATCAAAGCCTGGAGAGGAACGAGAATTCCAAAGGTGGTGGATTTGGCTGTGACGCCGGATGGCGAGAGTATGATTACAGTGTTTTCGGATAAAGAGATCCGGATCTTGAATTTGGAGACAAAAGTCGAACGTGTTATCTCTGAGGAACAGCCAATTACTTCCCTTTCAATTTCTGGTGATGGTAAGTTTTTTATAGTCAACTTGAGCTGCCAAGAGATACATCTTTGGGATCTTGCTGGAGAGTGGAAACAACCATTGAAGTTCTCGGGTCACAGGCAGAGCAAATACGTGATACGGTCATGTTTTGGTGGGTTGGATAGTTCGTTCATCGCCAGTGGAAGTGAGGATTCACAGGTTTACATATGGAATCTAAAGAACACAAAGCCGCTTGAAGTGTTATCAGGTCATTCGATGACCGTAAACTGTGTAAGCTGGAACCCGAAAAATCCTCGGATGCTAGCCTCTGCTAGTGATGACCAAACCATCCGTATTTGGGGACCGGGCAAACCGAACAAACCACTGAACTGA

Protein Analysis

523

Amino Acids

59.12

Weight (kDa)

5.73

Isoelectric Point (pI)

32.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LisH_WDR26 PF23627 7 - 48 2.3e-17 WDR26 Lis-homology motif
Beta-prop_CAF1B_HIR1 PF24105 208 - 334 2e-09 CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz PF24807 214 - 383 1.4e-20 CDC20/Fizzy WD40 domain
WD40_Prp19 PF24814 214 - 348 6.8e-14 Prp19 WD40 domain
Beta-prop_TEP1_2nd PF25047 214 - 387 2.8e-12 TEP-1 second beta-propeller
Beta-prop_EML PF23409 215 - 393 3.7e-10 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR3_1st PF25173 215 - 336 1e-18 WDR3 first beta-propeller domain
Beta-prop_Aladin PF25460 215 - 300 1.2e-09 Aladin seven-bladed propeller
WDR55 PF24796 215 - 298 4.5e-06 WDR55
WD40 PF00400 216 - 251 3.9e-07 WD domain, G-beta repeat
EIF3I PF24805 221 - 414 1.5e-08 EIF3I
Beta-prop_WDR5 PF25175 221 - 513 8.1e-50 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 223 - 476 3.7e-34 THOC3 beta-propeller domain
Beta-prop_RIG_2nd PF23775 223 - 329 8.6e-06 RIG second beta-propeller
Beta-prop_WDR3_2nd PF25172 225 - 384 5.6e-10 WDR3 second beta-propeller domain
WD40_Gbeta PF25391 227 - 471 2.6e-12 G protein beta WD-40 repeat protein
Beta-prop_WDR36-Utp21_1st PF25171 229 - 513 3.7e-09 WDR36/Utp21 first beta-propeller
Beta-prop_WDR35_TULP_N PF24797 257 - 388 2.2e-07 WDR35/TULP4 N-terminal
WD40_WDHD1_1st PF24817 258 - 330 3.4e-06 WDHD1 first WD40 domain
Beta-prop_EML_2 PF23414 279 - 428 6.8e-10 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_RIG_2nd PF23775 315 - 519 8.3e-06 RIG second beta-propeller
WDR55 PF24796 316 - 426 3.4e-06 WDR55
WD40_Prp19 PF24814 316 - 441 5e-07 Prp19 WD40 domain
Beta-prop_EML_2 PF23414 363 - 513 3.4e-11 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR19_1st PF23389 368 - 512 1.3e-07 WDR19 first beta-propeller
WD40_MABP1-WDR62_2nd PF24782 370 - 513 6.3e-07 MABP1/WDR62 second WD40 domain
Beta-prop_WDR3_1st PF25173 387 - 513 1.6e-16 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 389 - 513 1.1e-13 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_2nd PF25172 397 - 513 2.2e-07 WDR3 second beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 436 - 513 5.4e-08 CAF1B/HIR1 beta-propeller domain
Beta-prop_EIPR1 PF23609 449 - 513 9.2e-06 EIPR1 beta-propeller
WD40_WDHD1_1st PF24817 454 - 513 3e-08 WDHD1 first WD40 domain
WD40_Prp19 PF24814 454 - 515 2.2e-11 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 454 - 513 1.3e-15 THOC3 beta-propeller domain
WD40 PF00400 476 - 513 4.6e-09 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015082)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G43920
fragaria_vesca FvH4_2g20200
malus_domestica MD10G1173700.v1.1
prunus_persica Prupe.8G212300_v2.0.a1
pyrus_communis pycom05g17030 pycom10g14980
rosa_chinensis RchiOBHm_Chr6g0285971
rosa_laevigata RLG00000012593
rosa_multiflora Rmu_sc0005513.1_g000002
rosa_roxburghii Rroxscaffold_7G00182560
rosa_rugosa Rorug06G0177800
rosa_samantha Rh6AG289900 Rh6BG291900 Rh6CG292900 Rh6DG285000
rosa_wichuraiana Rw6G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 773
Acc16I TGCGCA 1 cut(s) 958
AccB7I CCANNNNNTGG 1 cut(s) 658
AccI GTMKAC 1 cut(s) 432
AccIII TCCGGA 1 cut(s) 1143
AciI CCGC 3 cut(s) 621, 861, 1430
AclWI GGATC 4 cut(s) 618, 1135, 1154, 1281
AcoI YGGCCR 1 cut(s) 717
AcsI RAATTY 6 cut(s) 56, 122, 222, 633, 1068, 1153
AcuI CTGAAG 2 cut(s) 624, 803
AcyI GRCGYC 1 cut(s) 1097
AfaI GTAC 3 cut(s) 207, 739, 759
AfiI CCNNNNNNNGG 3 cut(s) 658, 1010, 1537
AflII CTTAAG 1 cut(s) 878
AflIII ACRYGT 2 cut(s) 566, 1174
AjnI CCWGG 1 cut(s) 1052
AleI CACNNNNGTG 1 cut(s) 902
AloI GAACNNNNNNTCC 4 cut(s) 1054, 1086, 1352, 1384
AluBI AGCT 7 cut(s) 152, 347, 743, 883, 951, 1251, 1476
AluI AGCT 7 cut(s) 152, 347, 743, 883, 951, 1251, 1476
Alw26I GTCTC 6 cut(s) 533, 621, 638, 829, 904, 1154
AlwI GGATC 4 cut(s) 618, 1135, 1154, 1281
Ama87I CYCGRG 1 cut(s) 1309
Aor13HI TCCGGA 1 cut(s) 1143
AoxI GGCC 2 cut(s) 321, 717
ApeKI GCWGC 1 cut(s) 1251
ApoI RAATTY 6 cut(s) 56, 122, 222, 633, 1068, 1153
ArsI GACNNNNNNTTYG 2 cut(s) 209, 241
AspLEI GCGC 1 cut(s) 959
AspS9I GGNCC 2 cut(s) 553, 1541
AsuC2I CCSGG 1 cut(s) 1545
AsuHPI GGTGA 2 cut(s) 437, 1232
AsuII TTCGAA 1 cut(s) 407
AsuNHI GCTAGC 1 cut(s) 1501
AvaI CYCGRG 1 cut(s) 1309
AvaII GGWCC 2 cut(s) 553, 1541
BalI TGGCCA 1 cut(s) 719
BauI CACGAG 1 cut(s) 826
BbvCI CCTCAGC 1 cut(s) 870
BbvI GCAGC 1 cut(s) 1238
BccI CCATC 7 cut(s) 355, 409, 544, 1028, 1097, 1217, 1535
BceAI ACGGC 1 cut(s) 273
BciT130I CCWGG 1 cut(s) 1054
BcnI CCSGG 1 cut(s) 1545
BcoDI GTCTC 6 cut(s) 533, 621, 638, 829, 904, 1154
BfaI CTAG 5 cut(s) 215, 269, 449, 1502, 1512
BfrI CTTAAG 1 cut(s) 878
BglII AGATCT 1 cut(s) 135
BisI GCNGC 2 cut(s) 1252, 1430
BlsI GCNGC 2 cut(s) 1253, 1431
Bme1390I CCNGG 2 cut(s) 1054, 1545
Bme18I GGWCC 2 cut(s) 553, 1541
BmeT110I CYCGRG 1 cut(s) 1309
BmgT120I GGNCC 2 cut(s) 553, 1541
BmiI GGNNCC 3 cut(s) 965, 1481, 1542
BmrFI CCNGG 2 cut(s) 1054, 1545
BmrI ACTGGG 1 cut(s) 202
BmsI GCATC 3 cut(s) 580, 734, 1488
BmtI GCTAGC 1 cut(s) 1505
BmuI ACTGGG 1 cut(s) 202
BoxI GACNNNNGTC 1 cut(s) 1166
BpmI CTGGAG 3 cut(s) 500, 1075, 1302
Bpu10I CCTNAGC 1 cut(s) 870
Bpu14I TTCGAA 1 cut(s) 407
BpuEI CTTGAG 2 cut(s) 815, 1267
BpuMI CCSGG 1 cut(s) 1545
BsaAI YACGTR 2 cut(s) 567, 1333
BsaBI GATNNNNATC 1 cut(s) 1145
BsaHI GRCGYC 1 cut(s) 1097
BsaI GGTCTC 1 cut(s) 621
BsaJI CCNNGG 2 cut(s) 237, 1493
BsaWI WCCGGW 2 cut(s) 422, 1143
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 3 cut(s) 658, 1010, 1537
Bse1I ACTGG 6 cut(s) 197, 483, 765, 812, 940, 1377
Bse3DI GCAATG 1 cut(s) 287
Bse8I GATNNNNATC 1 cut(s) 1145
BseAI TCCGGA 1 cut(s) 1143
BseBI CCWGG 1 cut(s) 1054
BseDI CCNNGG 2 cut(s) 237, 1493
BseGI GGATG 8 cut(s) 247, 316, 366, 769, 895, 1108, 1503, 1527
BseJI GATNNNNATC 1 cut(s) 1145
BseLI CCNNNNNNNGG 3 cut(s) 658, 1010, 1537
BseMI GCAATG 1 cut(s) 287
BseMII CTCAG 4 cut(s) 150, 504, 861, 1176
BseNI ACTGG 6 cut(s) 197, 483, 765, 812, 940, 1377
BseRI GAGGAG 1 cut(s) 472
BseXI GCAGC 1 cut(s) 1238
BshFI GGCC 2 cut(s) 323, 719
BsiHKCI CYCGRG 1 cut(s) 1309
BsiSI CCGG 4 cut(s) 423, 1100, 1144, 1544
BslFI GGGAC 2 cut(s) 1040, 1554
BslI CCNNNNNNNGG 3 cut(s) 658, 1010, 1537
BsmAI GTCTC 6 cut(s) 533, 621, 638, 829, 904, 1154
BsmFI GGGAC 2 cut(s) 1040, 1554
BsnI GGCC 2 cut(s) 323, 719
Bso31I GGTCTC 1 cut(s) 621
BsoBI CYCGRG 1 cut(s) 1309
Bsp119I TTCGAA 1 cut(s) 407
Bsp13I TCCGGA 1 cut(s) 1143
Bsp1407I TGTACA 1 cut(s) 737
Bsp143I GATC 6 cut(s) 135, 610, 1044, 1140, 1146, 1273
Bsp19I CCATGG 1 cut(s) 237
BspACI CCGC 3 cut(s) 621, 861, 1430
BspANI GGCC 2 cut(s) 323, 719
BspCNI CTCAG 4 cut(s) 151, 505, 862, 1177
BspEI TCCGGA 1 cut(s) 1143
BspLI GGNNCC 3 cut(s) 965, 1481, 1542
BspOI GCTAGC 1 cut(s) 1505
BspPI GGATC 4 cut(s) 618, 1135, 1154, 1281
BspT104I TTCGAA 1 cut(s) 407
BspTI CTTAAG 1 cut(s) 878
BspTNI GGTCTC 1 cut(s) 621
BsrDI GCAATG 1 cut(s) 287
BsrGI TGTACA 1 cut(s) 737
BsrI ACTGG 6 cut(s) 197, 483, 765, 812, 940, 1377
BssECI CCNNGG 2 cut(s) 237, 1493
BssMI GATC 6 cut(s) 135, 610, 1044, 1140, 1146, 1273
BssNI GRCGYC 1 cut(s) 1097
BssSI CACGAG 1 cut(s) 826
BssT1I CCWWGG 1 cut(s) 237
Bst2BI CACGAG 1 cut(s) 826
Bst2UI CCWGG 1 cut(s) 1054
Bst4CI ACNGT 8 cut(s) 440, 617, 649, 946, 1123, 1341, 1462, 1469
BstACI GRCGYC 1 cut(s) 1097
BstAFI CTTAAG 1 cut(s) 878
BstAUI TGTACA 1 cut(s) 737
BstBAI YACGTR 2 cut(s) 567, 1333
BstBI TTCGAA 1 cut(s) 407
BstC8I GCNNGC 3 cut(s) 345, 387, 1503
BstDEI CTNAG 4 cut(s) 159, 513, 870, 1185
BstDSI CCRYGG 1 cut(s) 237
BstF5I GGATG 8 cut(s) 247, 316, 366, 769, 895, 1108, 1503, 1527
BstHHI GCGC 1 cut(s) 959
BstKTI GATC 6 cut(s) 138, 613, 1047, 1143, 1149, 1276
BstMAI GTCTC 6 cut(s) 533, 621, 638, 829, 904, 1154
BstMBI GATC 6 cut(s) 135, 610, 1044, 1140, 1146, 1273
BstNI CCWGG 1 cut(s) 1054
BstNSI RCATGY 1 cut(s) 861
BstPAI GACNNNNGTC 1 cut(s) 1166
BstSCI CCNGG 2 cut(s) 1052, 1543
BstV1I GCAGC 1 cut(s) 1238
BstX2I RGATCY 4 cut(s) 135, 1140, 1146, 1273
BstYI RGATCY 4 cut(s) 135, 1140, 1146, 1273
BsuRI GGCC 2 cut(s) 323, 719
BtgI CCRYGG 1 cut(s) 237
BtgZI GCGATG 1 cut(s) 1357
BtsCI GGATG 8 cut(s) 247, 316, 366, 769, 895, 1108, 1503, 1527
BtsI GCAGTG 1 cut(s) 720
BtsIMutI CAGTG 7 cut(s) 613, 720, 942, 1029, 1128, 1384, 1562
Cac8I GCNNGC 3 cut(s) 345, 387, 1503
CfoI GCGC 1 cut(s) 959
Cfr13I GGNCC 2 cut(s) 553, 1541
CseI GACGC 1 cut(s) 1105
Csp6I GTAC 3 cut(s) 206, 738, 758
CspCI CAANNNNNGTGG 2 cut(s) 1062, 1097
CviAII CATG 6 cut(s) 53, 238, 585, 858, 960, 1344
CviQI GTAC 3 cut(s) 206, 738, 758
DdeI CTNAG 4 cut(s) 159, 513, 870, 1185
DpnI GATC 6 cut(s) 137, 612, 1046, 1142, 1148, 1275
DpnII GATC 6 cut(s) 135, 610, 1044, 1140, 1146, 1273
DrdI GACNNNNNNGTC 1 cut(s) 773
DseDI GACNNNNNNGTC 1 cut(s) 773
EaeI YGGCCR 1 cut(s) 717
Eco130I CCWWGG 1 cut(s) 237
Eco31I GGTCTC 1 cut(s) 621
Eco47I GGWCC 2 cut(s) 553, 1541
Eco57I CTGAAG 2 cut(s) 624, 803
Eco88I CYCGRG 1 cut(s) 1309
EcoRI GAATTC 3 cut(s) 56, 122, 1068
EcoRII CCWGG 1 cut(s) 1052
EcoT14I CCWWGG 1 cut(s) 237
ErhI CCWWGG 1 cut(s) 237
FaeI CATG 6 cut(s) 56, 241, 588, 861, 963, 1347
FaqI GGGAC 2 cut(s) 1040, 1554
FatI CATG 6 cut(s) 52, 237, 584, 857, 959, 1343
FauNDI CATATG 1 cut(s) 1406
FblI GTMKAC 1 cut(s) 432
Fnu4HI GCNGC 2 cut(s) 1252, 1430
FokI GGATG 8 cut(s) 254, 323, 373, 776, 902, 1115, 1510, 1514
Fsp4HI GCNGC 2 cut(s) 1252, 1430
FspBI CTAG 5 cut(s) 215, 269, 449, 1502, 1512
FspI TGCGCA 1 cut(s) 958
GlaI GCGC 1 cut(s) 958
GluI GCNGC 2 cut(s) 1252, 1430
GsuI CTGGAG 3 cut(s) 500, 1075, 1302
HaeIII GGCC 2 cut(s) 323, 719
HapII CCGG 4 cut(s) 423, 1100, 1144, 1544
HgaI GACGC 1 cut(s) 1105
HhaI GCGC 1 cut(s) 959
Hin1I GRCGYC 1 cut(s) 1097
Hin1II CATG 6 cut(s) 56, 241, 588, 861, 963, 1347
Hin6I GCGC 1 cut(s) 957
HinP1I GCGC 1 cut(s) 957
HincII GTYRAC 2 cut(s) 895, 1243
HindII GTYRAC 2 cut(s) 895, 1243
HpaII CCGG 4 cut(s) 423, 1100, 1144, 1544
HphI GGTGA 2 cut(s) 437, 1232
Hpy166II GTNNAC 5 cut(s) 433, 895, 1243, 1402, 1465
Hpy188I TCNGA 6 cut(s) 160, 643, 1000, 1132, 1186, 1497
Hpy8I GTNNAC 5 cut(s) 433, 895, 1243, 1402, 1465
HpyAV CCTTC 3 cut(s) 513, 648, 748
HpyCH4III ACNGT 8 cut(s) 440, 617, 649, 946, 1123, 1341, 1462, 1469
HpyCH4IV ACGT 4 cut(s) 304, 566, 1174, 1332
HpyCH4V TGCA 3 cut(s) 593, 691, 725
HpyF3I CTNAG 4 cut(s) 159, 513, 870, 1185
HpySE526I ACGT 4 cut(s) 304, 566, 1174, 1332
Hsp92I GRCGYC 1 cut(s) 1097
Hsp92II CATG 6 cut(s) 56, 241, 588, 861, 963, 1347
HspAI GCGC 1 cut(s) 957
Kpn2I TCCGGA 1 cut(s) 1143
Kzo9I GATC 6 cut(s) 135, 610, 1044, 1140, 1146, 1273
LmnI GCTCC 1 cut(s) 352
Lsp1109I GCAGC 1 cut(s) 1238
LweI GCATC 3 cut(s) 580, 734, 1488
MaeI CTAG 5 cut(s) 215, 269, 449, 1502, 1512
MaeII ACGT 4 cut(s) 304, 566, 1174, 1332
MaeIII GTNAC 4 cut(s) 333, 354, 1093, 1313
MalI GATC 6 cut(s) 137, 612, 1046, 1142, 1148, 1275
MboI GATC 6 cut(s) 135, 610, 1044, 1140, 1146, 1273
MboII GAAGA 2 cut(s) 58, 385
MfeI CAATTG 1 cut(s) 501
MflI RGATCY 4 cut(s) 135, 1140, 1146, 1273
MlsI TGGCCA 1 cut(s) 719
MluNI TGGCCA 1 cut(s) 719
MlyI GAGTC 3 cut(s) 137, 841, 965
MmeI TCCRAC 3 cut(s) 270, 504, 1338
Mox20I TGGCCA 1 cut(s) 719
MroI TCCGGA 1 cut(s) 1143
MscI TGGCCA 1 cut(s) 719
MseI TTAA 1 cut(s) 879
MslI CAYNNNNRTG 2 cut(s) 672, 902
Msp20I TGGCCA 1 cut(s) 719
MspA1I CMGCKG 1 cut(s) 152
MspCI CTTAAG 1 cut(s) 878
MspI CCGG 4 cut(s) 423, 1100, 1144, 1544
MspR9I CCNGG 2 cut(s) 1054, 1545
MunI CAATTG 1 cut(s) 501
MvaI CCWGG 1 cut(s) 1054
NciI CCSGG 1 cut(s) 1545
NcoI CCATGG 1 cut(s) 237
NdeI CATATG 1 cut(s) 1406
NdeII GATC 6 cut(s) 135, 610, 1044, 1140, 1146, 1273
NheI GCTAGC 1 cut(s) 1501
NlaIII CATG 6 cut(s) 56, 241, 588, 861, 963, 1347
NlaIV GGNNCC 3 cut(s) 965, 1481, 1542
NmeAIII GCCGAG 1 cut(s) 958
NmuCI GTSAC 2 cut(s) 1093, 1313
NsbI TGCGCA 1 cut(s) 958
NspI RCATGY 1 cut(s) 861
NspV TTCGAA 1 cut(s) 407
OliI CACNNNNGTG 1 cut(s) 902
PfeI GAWTC 8 cut(s) 96, 155, 376, 419, 490, 939, 1391, 1411
PflMI CCANNNNNTGG 1 cut(s) 658
PkrI GCNGC 2 cut(s) 1253, 1431
PleI GAGTC 3 cut(s) 136, 840, 965
PpsI GAGTC 3 cut(s) 136, 840, 965
Ppu21I YACGTR 2 cut(s) 567, 1333
PshAI GACNNNNGTC 1 cut(s) 1166
Psp6I CCWGG 1 cut(s) 1052
PspGI CCWGG 1 cut(s) 1052
PspN4I GGNNCC 3 cut(s) 965, 1481, 1542
PspPI GGNCC 2 cut(s) 553, 1541
PsuI RGATCY 4 cut(s) 135, 1140, 1146, 1273
PvuII CAGCTG 1 cut(s) 152
RsaI GTAC 3 cut(s) 207, 739, 759
RsaNI GTAC 3 cut(s) 206, 738, 758
RseI CAYNNNNRTG 2 cut(s) 672, 902
SaqAI TTAA 1 cut(s) 879
SatI GCNGC 2 cut(s) 1252, 1430
Sau3AI GATC 6 cut(s) 135, 610, 1044, 1140, 1146, 1273
Sau96I GGNCC 2 cut(s) 553, 1541
SchI GAGTC 3 cut(s) 137, 841, 965
ScrFI CCNGG 2 cut(s) 1054, 1545
SfaNI GCATC 3 cut(s) 580, 734, 1488
SfuI TTCGAA 1 cut(s) 407
SinI GGWCC 2 cut(s) 553, 1541
SmiMI CAYNNNNRTG 2 cut(s) 672, 902
SmlI CTYRAG 3 cut(s) 794, 878, 1246
SmoI CTYRAG 3 cut(s) 794, 878, 1246
SsiI CCGC 3 cut(s) 621, 861, 1430
SspMI CTAG 5 cut(s) 215, 269, 449, 1502, 1512
StyD4I CCNGG 2 cut(s) 1052, 1543
StyI CCWWGG 1 cut(s) 237
TaaI ACNGT 8 cut(s) 440, 617, 649, 946, 1123, 1341, 1462, 1469
TaiI ACGT 4 cut(s) 307, 569, 1177, 1335
TaqI TCGA 5 cut(s) 126, 407, 777, 1170, 1454
TatI WGTACW 1 cut(s) 737
TauI GCSGC 1 cut(s) 1432
TfiI GAWTC 8 cut(s) 96, 155, 376, 419, 490, 939, 1391, 1411
Tru1I TTAA 1 cut(s) 879
Tru9I TTAA 1 cut(s) 879
TscAI CASTG 7 cut(s) 620, 727, 949, 1036, 1128, 1384, 1569
TseFI GTSAC 2 cut(s) 1093, 1313
TseI GCWGC 1 cut(s) 1251
Tsp45I GTSAC 2 cut(s) 1093, 1313
TspDTI ATGAA 5 cut(s) 49, 69, 368, 690, 1360
TspGWI ACGGA 4 cut(s) 339, 352, 373, 1520
TspRI CASTG 7 cut(s) 620, 727, 949, 1036, 1128, 1384, 1569
Van91I CCANNNNNTGG 1 cut(s) 658
Vha464I CTTAAG 1 cut(s) 878
VpaK11BI GGWCC 2 cut(s) 553, 1541
XapI RAATTY 6 cut(s) 56, 122, 222, 633, 1068, 1153
XbaI TCTAGA 2 cut(s) 214, 448
XceI RCATGY 1 cut(s) 861
XmiI GTMKAC 1 cut(s) 432
XspI CTAG 5 cut(s) 215, 269, 449, 1502, 1512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.