AT5G50420

peptide-O-fucosyltransferase activity

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
20530200 .. 20532856
2657 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G50420.1

Sequence Viewer

Length: 1701 bp
ATGGAGCGAAACTCGTCGGACGACGAAGAAGACCACCAGCATTTGATTCCCCAAAACGACACTCGAATCCGTCACCGGGAGGATTCAGTTTCCTCCAACGCCACCACAATCGGCGGGAATCAGAGATCGGCGTTTCAGATCGACGACATTTTACATCGAGTCCAACACCGTGGGAAGATCTCGCTCAACAAGCGTTACGTCATTGTCTTCGTTTCTCTAATTATCTCAATCGGTCTTCTCTTCTTACTCACTGATCCTCGTGAACTATTTGCGGCGAATTTCTCGAGTTTTAAGCTGGATCCATTGTCGAATCGTGTCAAAGAATCTGAGCTTCGTGCTTTGTATCTTCTGAGACAACAACAGCTCGCGCTTCTATCTCTTTGGAATGGTACGTTGGTGAATCCTTCTCTTAATCAATCTGAGAACGCTTTGGGATCGTCTGTTTTGTTTGAGGATGTGAAATCTGCTGTTTCGAAGCAGATTTCATTGAATAAGGAGATCCAAGAGGTGCTTCTATCACCACACCGGAGTAGCAATTACTCCGGTGGCACCGATGTTGATTCGGTGAATTTCTCATATAATAGATGTAGAAAAGTGGATCAGAAGTTGTCAGATCGGAAAACTGTAGAGTGGAAGCCTAGATCTGATAAGTTTCTATTCGCTATTTGTCTCTCAGGTCAAATGAGTAACCATTTGATATGTTTAGAGAAACATATGTTCTTTGCTGCATTGCTGGATCGAGTTTTGGTGATACCTAGCTCTAAGTTTGATTACCAGTATGATAGAGTGATAGATATAGAGCGGATTAACACTTGCTTGGGAAGAAATGTTGTTGTTGCTTTTGATCAGTTTAAGGAAAAGGCGAAAAAGAATCATTTTCGGATTGATCGGTTCATATGTTACTTTTCATCACCACAGCTTTGTTATGTGGATGAGGAACATATTAAAAAGCTGAAAGGTTTGGGGATTTCCATTGATGGGAAGCTTGAGGCTCCTTGGAGTGAAGACATAAAGAAGCCGAGCAAGAGAACTGTGCAAGACGTCCAGATGAAGTTTAAGTCTGATGATGATGTGATTGCAATCGGGGATGTCTTCTATGCTGATATGGAGCAAGATTGGGTGATGCAACCTGGTGGACCTATTAACCACAAGTGTAAGACACTAATCGAACCTAGTAAGCTGATCTTGTTGACCGCACAGAGATTCATCCAGACCTTCTTGGGAAAGAATTTCATCGCACTTCATTTCCGCAGACATGGGTTCCTCAAATTTTGCAATGCAAAATCGCCAAGTTGCTTCTATCCAATTCCACAAGCTGCAGAGTGCATCGCTCGGATAGTGGAAAGATCCAATGGCGCAGTCATCTATCTTTCAACAGATGCTGCAGAAAGTGAGACAAGTCTGCTTCAGTCACTTGTTGTGGTAGATGGAAAAATTGTGCCTCTTGTCAAACGTCCACCGCGTAATTCAGCTGAAAAGTGGGATGCATTGTTATATCGACATGGTATAGAGGATGACTCTCAGGTGGATGCAATGCTTGATAAAACGATATGCGCCATGTCCAGCGTATTCATTGGAGCCTCGGGATCAACTTTCACAGAAGATATATTGAGGCTAAGGAAAGATTGGGGAACATCCTCTACGTGCGATGAGTACCTCTGCCGAGGGGAAGAGCCAAACTTTATAGCAGAAGATGAATAA

Protein Analysis

566

Amino Acids

64.41

Weight (kDa)

6.72

Isoelectric Point (pI)

42.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 240 - 540 5.2e-08 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013338)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1044
AccB1I GGYRCC 1 cut(s) 548
AccBSI CCGCTC 1 cut(s) 802
AccII CGCG 2 cut(s) 368, 1462
AciI CCGC 6 cut(s) 114, 272, 802, 1194, 1249, 1460
AclWI GGATC 9 cut(s) 248, 293, 306, 442, 493, 606, 744, 1341, 1594
AcsI RAATTY 4 cut(s) 277, 568, 1228, 1268
AcuI CTGAAG 1 cut(s) 1391
AcyI GRCGYC 1 cut(s) 1041
AfaI GTAC 2 cut(s) 391, 1655
AfiI CCNNNNNNNGG 2 cut(s) 76, 978
AgsI TTSAA 2 cut(s) 490, 1374
AjnI CCWGG 1 cut(s) 1129
AjuI GAANNNNNNNTTGG 4 cut(s) 377, 409, 495, 527
Alw26I GTCTC 3 cut(s) 346, 674, 1388
AlwI GGATC 9 cut(s) 248, 293, 306, 442, 493, 606, 744, 1341, 1594
AlwNI CAGNNNCTG 1 cut(s) 1382
Ama87I CYCGRG 2 cut(s) 283, 1582
ApeKI GCWGC 3 cut(s) 725, 1316, 1382
ApoI RAATTY 4 cut(s) 277, 568, 1228, 1268
AspLEI GCGC 3 cut(s) 370, 1358, 1556
AspS9I GGNCC 1 cut(s) 1136
AsuC2I CCSGG 1 cut(s) 77
AsuHPI GGTGA 7 cut(s) 65, 409, 510, 577, 760, 903, 1132
AsuII TTCGAA 1 cut(s) 473
AvaI CYCGRG 2 cut(s) 283, 1582
AvaII GGWCC 1 cut(s) 1136
BaeI ACNNNNGTAYC 2 cut(s) 381, 414
BamHI GGATCC 1 cut(s) 298
BanI GGYRCC 1 cut(s) 548
BauI CACGAG 1 cut(s) 258
BbsI GAAGAC 5 cut(s) 36, 199, 227, 1011, 1084
BbvI GCAGC 3 cut(s) 712, 1303, 1369
BccI CCATC 2 cut(s) 971, 1421
BciT130I CCWGG 1 cut(s) 1131
BclI TGATCA 1 cut(s) 844
BcnI CCSGG 1 cut(s) 77
BcoDI GTCTC 3 cut(s) 346, 674, 1388
BfaI CTAG 3 cut(s) 639, 756, 1173
BfmI CTRYAG 3 cut(s) 624, 1317, 1383
BglII AGATCT 2 cut(s) 177, 641
BisI GCNGC 4 cut(s) 273, 726, 1317, 1383
BlsI GCNGC 4 cut(s) 274, 727, 1318, 1384
Bme1390I CCNGG 2 cut(s) 77, 1131
Bme18I GGWCC 1 cut(s) 1136
BmeT110I CYCGRG 2 cut(s) 283, 1582
BmgT120I GGNCC 1 cut(s) 1136
BmiI GGNNCC 5 cut(s) 300, 550, 993, 1262, 1579
BmrFI CCNGG 2 cut(s) 77, 1131
BmsI GCATC 5 cut(s) 1113, 1335, 1369, 1474, 1519
BpiI GAAGAC 5 cut(s) 36, 199, 227, 1011, 1084
BplI GAGNNNNNCTC 3 cut(s) 28, 1502, 1534
Bpu10I CCTNAGC 1 cut(s) 1616
Bpu14I TTCGAA 1 cut(s) 473
BpuEI CTTGAG 1 cut(s) 1007
BpuMI CCSGG 1 cut(s) 77
BsaAI YACGTR 1 cut(s) 1644
BsaBI GATNNNNATC 1 cut(s) 1079
BsaHI GRCGYC 1 cut(s) 1041
BsaJI CCNNGG 4 cut(s) 169, 995, 1581, 1663
BsaWI WCCGGW 2 cut(s) 525, 542
Bsc4I CCNNNNNNNGG 2 cut(s) 76, 978
Bse1I ACTGG 1 cut(s) 775
Bse3DI GCAATG 3 cut(s) 728, 1282, 1539
Bse8I GATNNNNATC 1 cut(s) 1079
BseBI CCWGG 1 cut(s) 1131
BseDI CCNNGG 4 cut(s) 169, 995, 1581, 1663
BseGI GGATG 8 cut(s) 460, 937, 1093, 1206, 1489, 1519, 1534, 1634
BseJI GATNNNNATC 1 cut(s) 1079
BseLI CCNNNNNNNGG 2 cut(s) 76, 978
BseMI GCAATG 3 cut(s) 728, 1282, 1539
BseMII CTCAG 5 cut(s) 318, 341, 411, 687, 1535
BseNI ACTGG 1 cut(s) 775
BseXI GCAGC 3 cut(s) 712, 1303, 1369
Bsh1236I CGCG 2 cut(s) 368, 1462
BshNI GGYRCC 1 cut(s) 548
BsiHKCI CYCGRG 2 cut(s) 283, 1582
BsiSI CCGG 3 cut(s) 76, 526, 543
BslI CCNNNNNNNGG 2 cut(s) 76, 978
BsmAI GTCTC 3 cut(s) 346, 674, 1388
BsoBI CYCGRG 2 cut(s) 283, 1582
Bsp119I TTCGAA 1 cut(s) 473
BspACI CCGC 6 cut(s) 114, 272, 802, 1194, 1249, 1460
BspCNI CTCAG 5 cut(s) 319, 342, 412, 686, 1534
BspFNI CGCG 2 cut(s) 368, 1462
BspLI GGNNCC 5 cut(s) 300, 550, 993, 1262, 1579
BspMAI CTGCAG 2 cut(s) 1321, 1387
BspPI GGATC 9 cut(s) 248, 293, 306, 442, 493, 606, 744, 1341, 1594
BspQI GCTCTTC 1 cut(s) 1665
BspT104I TTCGAA 1 cut(s) 473
BspT107I GGYRCC 1 cut(s) 548
BsrBI CCGCTC 1 cut(s) 802
BsrDI GCAATG 3 cut(s) 728, 1282, 1539
BsrI ACTGG 1 cut(s) 775
BssECI CCNNGG 4 cut(s) 169, 995, 1581, 1663
BssNI GRCGYC 1 cut(s) 1041
BssSI CACGAG 1 cut(s) 258
BssT1I CCWWGG 1 cut(s) 995
Bst2BI CACGAG 1 cut(s) 258
Bst2UI CCWGG 1 cut(s) 1131
Bst4CI ACNGT 3 cut(s) 170, 625, 1033
Bst6I CTCTTC 2 cut(s) 245, 1665
BstACI GRCGYC 1 cut(s) 1041
BstBAI YACGTR 1 cut(s) 1644
BstBI TTCGAA 1 cut(s) 473
BstC8I GCNNGC 1 cut(s) 366
BstDEI CTNAG 7 cut(s) 327, 350, 420, 673, 762, 1521, 1616
BstDSI CCRYGG 1 cut(s) 169
BstF5I GGATG 8 cut(s) 460, 937, 1093, 1206, 1489, 1519, 1534, 1634
BstFNI CGCG 2 cut(s) 368, 1462
BstHHI GCGC 3 cut(s) 370, 1358, 1556
BstMAI GTCTC 3 cut(s) 346, 674, 1388
BstMWI GCNNNNNNNGC 1 cut(s) 190
BstNI CCWGG 1 cut(s) 1131
BstSCI CCNGG 2 cut(s) 75, 1129
BstSFI CTRYAG 3 cut(s) 624, 1317, 1383
BstUI CGCG 2 cut(s) 368, 1462
BstV1I GCAGC 3 cut(s) 712, 1303, 1369
BstV2I GAAGAC 5 cut(s) 36, 199, 227, 1011, 1084
BstX2I RGATCY 5 cut(s) 177, 298, 498, 641, 1346
BstXI CCANNNNNNTGG 1 cut(s) 170
BstYI RGATCY 5 cut(s) 177, 298, 498, 641, 1346
BtgI CCRYGG 1 cut(s) 169
BtgZI GCGATG 3 cut(s) 1219, 1312, 1662
BtsCI GGATG 8 cut(s) 460, 937, 1093, 1206, 1489, 1519, 1534, 1634
BtsIMutI CAGTG 1 cut(s) 249
Cac8I GCNNGC 1 cut(s) 366
CaiI CAGNNNCTG 1 cut(s) 1382
CfoI GCGC 3 cut(s) 370, 1358, 1556
Cfr13I GGNCC 1 cut(s) 1136
CsiI ACCWGGT 1 cut(s) 1129
Csp6I GTAC 2 cut(s) 390, 1654
CviAII CATG 3 cut(s) 1256, 1502, 1558
CviQI GTAC 2 cut(s) 390, 1654
DdeI CTNAG 7 cut(s) 327, 350, 420, 673, 762, 1521, 1616
Eam1104I CTCTTC 2 cut(s) 245, 1665
EarI CTCTTC 2 cut(s) 245, 1665
Eco130I CCWWGG 1 cut(s) 995
Eco47I GGWCC 1 cut(s) 1136
Eco57I CTGAAG 1 cut(s) 1391
Eco88I CYCGRG 2 cut(s) 283, 1582
EcoRII CCWGG 1 cut(s) 1129
EcoT14I CCWWGG 1 cut(s) 995
EcoT22I ATGCAT 1 cut(s) 1489
ErhI CCWWGG 1 cut(s) 995
FaeI CATG 3 cut(s) 1259, 1505, 1561
FalI AAGNNNNNCTT 4 cut(s) 495, 527, 1169, 1201
FatI CATG 3 cut(s) 1255, 1501, 1557
FauI CCCGC 1 cut(s) 107
FauNDI CATATG 2 cut(s) 714, 896
FbaI TGATCA 1 cut(s) 844
Fnu4HI GCNGC 4 cut(s) 273, 726, 1317, 1383
FokI GGATG 8 cut(s) 467, 944, 1100, 1193, 1496, 1526, 1541, 1621
Fsp4HI GCNGC 4 cut(s) 273, 726, 1317, 1383
FspBI CTAG 3 cut(s) 639, 756, 1173
GlaI GCGC 3 cut(s) 369, 1357, 1555
GluI GCNGC 4 cut(s) 273, 726, 1317, 1383
HapII CCGG 3 cut(s) 76, 526, 543
HhaI GCGC 3 cut(s) 370, 1358, 1556
Hin1I GRCGYC 1 cut(s) 1041
Hin1II CATG 3 cut(s) 1259, 1505, 1561
Hin6I GCGC 3 cut(s) 368, 1356, 1554
HinP1I GCGC 3 cut(s) 368, 1356, 1554
HincII GTYRAC 1 cut(s) 1191
HindII GTYRAC 1 cut(s) 1191
HindIII AAGCTT 1 cut(s) 983
HpaII CCGG 3 cut(s) 76, 526, 543
HphI GGTGA 7 cut(s) 65, 409, 510, 577, 760, 903, 1132
Hpy166II GTNNAC 4 cut(s) 263, 1136, 1191, 1457
Hpy188III TCNNGA 5 cut(s) 260, 283, 1045, 1210, 1584
Hpy8I GTNNAC 4 cut(s) 263, 1136, 1191, 1457
Hpy99I CGWCG 3 cut(s) 19, 26, 146
HpyAV CCTTC 2 cut(s) 414, 1225
HpyCH4III ACNGT 3 cut(s) 170, 625, 1033
HpyCH4IV ACGT 5 cut(s) 198, 392, 1041, 1453, 1643
HpyF10VI GCNNNNNNNGC 1 cut(s) 190
HpyF3I CTNAG 7 cut(s) 327, 350, 420, 673, 762, 1521, 1616
HpySE526I ACGT 5 cut(s) 198, 392, 1041, 1453, 1643
Hsp92I GRCGYC 1 cut(s) 1041
Hsp92II CATG 3 cut(s) 1259, 1505, 1561
HspAI GCGC 3 cut(s) 368, 1356, 1554
Ksp22I TGATCA 1 cut(s) 844
LguI GCTCTTC 1 cut(s) 1665
LmnI GCTCC 4 cut(s) 4, 997, 1108, 1577
Lsp1109I GCAGC 3 cut(s) 712, 1303, 1369
LweI GCATC 5 cut(s) 1113, 1335, 1369, 1474, 1519
MabI ACCWGGT 1 cut(s) 1129
MaeI CTAG 3 cut(s) 639, 756, 1173
MaeII ACGT 5 cut(s) 198, 392, 1041, 1453, 1643
MaeIII GTNAC 5 cut(s) 71, 194, 686, 899, 1410
MbiI CCGCTC 1 cut(s) 802
MflI RGATCY 5 cut(s) 177, 298, 498, 641, 1346
MluCI AATT 9 cut(s) 219, 277, 535, 568, 1228, 1268, 1305, 1434, 1465
MlyI GAGTC 2 cut(s) 168, 1511
MmeI TCCRAC 2 cut(s) 120, 187
Mph1103I ATGCAT 1 cut(s) 1489
MseI TTAA 7 cut(s) 291, 411, 807, 852, 945, 1056, 1143
MspA1I CMGCKG 1 cut(s) 1472
MspI CCGG 3 cut(s) 76, 526, 543
MspR9I CCNGG 2 cut(s) 77, 1131
MvaI CCWGG 1 cut(s) 1131
MvnI CGCG 2 cut(s) 368, 1462
MwoI GCNNNNNNNGC 1 cut(s) 190
NciI CCSGG 1 cut(s) 77
NdeI CATATG 2 cut(s) 714, 896
NlaIII CATG 3 cut(s) 1259, 1505, 1561
NlaIV GGNNCC 5 cut(s) 300, 550, 993, 1262, 1579
NmeAIII GCCGAG 2 cut(s) 1044, 1688
NmuCI GTSAC 2 cut(s) 71, 1410
NsiI ATGCAT 1 cut(s) 1489
NspV TTCGAA 1 cut(s) 473
PaeR7I CTCGAG 1 cut(s) 283
PciSI GCTCTTC 1 cut(s) 1665
PcsI WCGNNNNNNNCGW 1 cut(s) 1459
PkrI GCNGC 4 cut(s) 274, 727, 1318, 1384
PleI GAGTC 2 cut(s) 167, 1511
PpsI GAGTC 2 cut(s) 167, 1511
Ppu21I YACGTR 1 cut(s) 1644
Psp6I CCWGG 1 cut(s) 1129
PspGI CCWGG 1 cut(s) 1129
PspN4I GGNNCC 5 cut(s) 300, 550, 993, 1262, 1579
PspPI GGNCC 1 cut(s) 1136
PsrI GAACNNNNNNTAC 2 cut(s) 1624, 1656
PstI CTGCAG 2 cut(s) 1321, 1387
PstNI CAGNNNCTG 1 cut(s) 1382
PsuI RGATCY 5 cut(s) 177, 298, 498, 641, 1346
PvuII CAGCTG 1 cut(s) 1472
RsaI GTAC 2 cut(s) 391, 1655
RsaNI GTAC 2 cut(s) 390, 1654
SapI GCTCTTC 1 cut(s) 1665
SaqAI TTAA 7 cut(s) 291, 411, 807, 852, 945, 1056, 1143
SatI GCNGC 4 cut(s) 273, 726, 1317, 1383
Sau96I GGNCC 1 cut(s) 1136
SchI GAGTC 2 cut(s) 168, 1511
ScrFI CCNGG 2 cut(s) 77, 1131
SexAI ACCWGGT 1 cut(s) 1129
SfaNI GCATC 5 cut(s) 1113, 1335, 1369, 1474, 1519
SfcI CTRYAG 3 cut(s) 624, 1317, 1383
Sfr274I CTCGAG 1 cut(s) 283
SfuI TTCGAA 1 cut(s) 473
SinI GGWCC 1 cut(s) 1136
SlaI CTCGAG 1 cut(s) 283
SmlI CTYRAG 2 cut(s) 283, 986
SmoI CTYRAG 2 cut(s) 283, 986
Sse9I AATT 9 cut(s) 219, 277, 535, 568, 1228, 1268, 1305, 1434, 1465
SsiI CCGC 6 cut(s) 114, 272, 802, 1194, 1249, 1460
SspMI CTAG 3 cut(s) 639, 756, 1173
StyD4I CCNGG 2 cut(s) 75, 1129
StyI CCWWGG 1 cut(s) 995
TaaI ACNGT 3 cut(s) 170, 625, 1033
TaiI ACGT 5 cut(s) 201, 395, 1044, 1456, 1646
TaqI TCGA 9 cut(s) 64, 141, 157, 284, 308, 473, 739, 1167, 1498
TaqII GACCGA 1 cut(s) 221
TasI AATT 9 cut(s) 219, 277, 535, 568, 1228, 1268, 1305, 1434, 1465
TauI GCSGC 1 cut(s) 275
Tru1I TTAA 7 cut(s) 291, 411, 807, 852, 945, 1056, 1143
Tru9I TTAA 7 cut(s) 291, 411, 807, 852, 945, 1056, 1143
TscAI CASTG 1 cut(s) 256
TseFI GTSAC 2 cut(s) 71, 1410
TseI GCWGC 3 cut(s) 725, 1316, 1382
Tsp45I GTSAC 2 cut(s) 71, 1410
TspDTI ATGAA 8 cut(s) 474, 883, 897, 1064, 1195, 1222, 1232, 1561
TspGWI ACGGA 1 cut(s) 59
TspRI CASTG 1 cut(s) 256
VpaK11BI GGWCC 1 cut(s) 1136
XapI RAATTY 4 cut(s) 277, 568, 1228, 1268
XhoI CTCGAG 1 cut(s) 283
XspI CTAG 3 cut(s) 639, 756, 1173
ZraI GACGTC 1 cut(s) 1042
Zsp2I ATGCAT 1 cut(s) 1489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.