Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0013338

Physical Location & Seq

Genomic Coordinates Forward (+)

69974659 .. 69977324

Gene Structure 2666 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG484100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGACCGGCCGGACTCCTCCTCTTCCGACGACGACGACGATCGCCAGAACCTAATCGACCAGAACGAGCGCAAGCAGCTCCCCAGCCCTCGATCCGCCACCACTTTCCAAATCGACGACGGCGACGTCGACCGCCACCGCCACCACCGAGAAATACGACGGCGTTTCGCCTCCCTCAAGCTCAGCGACTTGTTCAACAAACGCTTCCTCATCTTCTTCATCTTCATCCCTCTCTTCGTCCTCATCCTCTTCTTCACCACCGACATCAAGAGCCTCTTCTTCTCCCGCCTCTCCGTCCCTCTTTCCGATTCCCTCTCCGATAAGCTCCGCGAGTCCGAACTGCGAGCTCTCTTCTTGCTCCGCCAGCAGCAGCTCGGTCTCTTCGGCCTCTGGAACCAAACGCATCCCAATTCCACTTCGAATCACTCCAATTCTGAACTCCAGGATTTCAAATCCGCCGTTTTGAGGCAGATTTCGTTGAATAAGGAGATTCAGCAGGTGTTGTTAGCTCCGCATGGCTCCGGCAACTCATCATCGGAATCCGAAGATTTCCGGGATCCGAGCCTCCTCGGCGATCGGTGTGGAGTAGTGGACCAGCGGTTTTCGGAGAGAAGAACAATCGAGTGGAAGCCTAATTCCGATAAGTACTTGTTGGCGATTTGCGTTTCGGGCCAAATGTCCAACCATTTGATCTGCTTAGAGAAGCACATGTTCTTCGCAGCATTGCTGAACCGGGTTTTGGTGATTCCTAGCCCTAAAGTGGATTTCCAGTACAGCACTGTGTTGGACATTGAGCACATTAACAAATGCATTGGGAGAAAAGTTGTGGTGACTTTCGAGGAATTGGCCGAGGAGAAGAAGAGACACATCCACATTGATAGGTTCATTTGCTATTTTTCGAAGCCGACGCTTTGCTATGTGGATGATGAGCATCTCAAGAAGCTGAAGGCATTGGGGGTTTCGTTCAAGAGCCGTGAGCCTGCTTGGGGGGAAGATGTGAAGAAGCCGAGCAAGAAGACTGTGCAGGATGTTCAGTCCAAGTTTTCGAGTGGTGATGATGTAATTGCCATTGGGGATGTTTTCTTTGCTGATTTGGAGAAAGATTGGGTGATGCAGCCGGGTGGTCCTCTGGCTCACAAATGCAAGACTCTTGTTGAGCCGAGTCGGCTTATAATGCTTACTGCCCAGCGTTTCATTCAGACGTTCCTGGGGAAAAATTTCATTGCACTACATTTCCGGCGGCATGGCTTCTTGAAGTTCTGCAATAATAAGCAGCCAAGTTGCTTTTACCCCATTCCGCAAGCCGCGGATTGCATCACCCGGGTTGCTGAAAGGGCCAATGCACCAGTTATATATCTTTCAACAGATGCAGCTGAAAGCGAAACTGGTTTGCTGCAGTCACTAGTTGTTGCGAATGGGAAGGCTGTACCACTTGTTAAACGGCCTGCACGAAATTCAGCTGAAAAGTGGGATGCTTTGTTATACAGGCATGGAATTGAGGGGGACTCTCAGGTAGAAGCTATGCTGGATAAGACAATAAGTGCCATGTCAAGTGTTTTCATCGGAGCATCTGGATCCACTTTCACAGAGGACATCTTGCGGCTCCGGAAGGATTGGGGTTCAGCTTCTGTGTGTGATGAGTACCTCTGCCAAGGTGAAGAGCCTAACTTCATTGCAGAGAATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006464 GO:0006486 GO:0006493 GO:0006807 GO:0008150 GO:0008152 GO:0008417 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0034645 GO:0036065 GO:0036066 GO:0036211 GO:0043170 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0046922 GO:0070085 GO:0071704 GO:0140096 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00514 map00514

Pfam Domains

Protein Families

O-FucT

Protein Analysis

562

Amino Acids

63.95

Weight (kDa)

6.77

Isoelectric Point (pI)

49.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
O-FucT	PF10250	235 - 536	6.9e-08	GDP-fucose protein O-fucosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013338)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50420
fragaria_vesca	FvH4_6g36080
malus_domestica	MD09G1171900.v1.1 MD17G1155100.v1.1
prunus_persica	Prupe.3G030300_v2.0.a1
pyrus_communis	pycom09g08920 pycom17g14790
rosa_chinensis	RchiOBHm_Chr2g0148131
rosa_laevigata	RLG00000020319
rosa_multiflora	Rmu_co8472331.1_g000001 Rmu_sc0001516.1_g000096 Rmu_sc0012028.1_g000005
rosa_rugosa	Rorug02G0403900
rosa_samantha	Rh2AG462400 Rh2BG475400 Rh2CG449200 Rh2DG484100
rosa_wichuraiana	Rw2G037690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1172
AarI	CACCTGC	1 cut(s)	487
AasI	GACNNNNNNGTC	1 cut(s)	125
AatII	GACGTC	1 cut(s)	129
Acc36I	ACCTGC	1 cut(s)	487
AccI	GTMKAC	1 cut(s)	129
AccII	CGCG	2 cut(s)	330, 1307
AccIII	TCCGGA	1 cut(s)	1605
AclWI	GGATC	5 cut(s)	87, 551, 564, 1569, 1582
AcoI	YGGCCR	2 cut(s)	8, 846
AcsI	RAATTY	2 cut(s)	1216, 1453
AcuI	CTGAAG	1 cut(s)	965
AcyI	GRCGYC	1 cut(s)	126
AfaI	GTAC	4 cut(s)	647, 773, 1428, 1643
AfiI	CCNNNNNNNGG	4 cut(s)	465, 739, 760, 986
AflIII	ACRYGT	1 cut(s)	708
AgsI	TTSAA	6 cut(s)	196, 451, 481, 967, 1255, 1362
AhlI	ACTAGT	1 cut(s)	1402
AjnI	CCWGG	2 cut(s)	441, 1206
AjuI	GAANNNNNNNTTGG	2 cut(s)	722, 754
Alw21I	GWGCWC	2 cut(s)	349, 798
Alw26I	GTCTC	2 cut(s)	383, 856
AlwI	GGATC	5 cut(s)	87, 551, 564, 1569, 1582
AlwNI	CAGNNNCTG	1 cut(s)	1628
Ama87I	CYCGRG	1 cut(s)	1320
Aor13HI	TCCGGA	1 cut(s)	1605
AoxI	GGCC	6 cut(s)	8, 385, 670, 846, 1335, 1442
ApeKI	GCWGC	8 cut(s)	76, 367, 370, 719, 1114, 1273, 1370, 1393
ApoI	RAATTY	2 cut(s)	1216, 1453
Asp700I	GAANNNNTTC	1 cut(s)	1217
AspLEI	GCGC	1 cut(s)	72
AspS9I	GGNCC	5 cut(s)	4, 592, 670, 1124, 1335
AsuC2I	CCSGG	5 cut(s)	554, 734, 1119, 1321, 1322
AsuHPI	GGTGA	7 cut(s)	247, 754, 841, 1064, 1120, 1309, 1667
AsuII	TTCGAA	2 cut(s)	419, 899
AvaI	CYCGRG	1 cut(s)	1320
AvaII	GGWCC	3 cut(s)	4, 592, 1124
BamHI	GGATCC	2 cut(s)	556, 1574
BanII	GRGCYC	1 cut(s)	349
BbsI	GAAGAC	1 cut(s)	1022
Bbv12I	GWGCWC	2 cut(s)	349, 798
BbvI	GCAGC	8 cut(s)	88, 379, 382, 731, 1126, 1285, 1380, 1382
BceAI	ACGGC	5 cut(s)	136, 176, 443, 957, 1457
BciT130I	CCWGG	2 cut(s)	443, 1208
BcnI	CCSGG	5 cut(s)	554, 734, 1119, 1321, 1322
BcoDI	GTCTC	2 cut(s)	383, 856
BcuI	ACTAGT	1 cut(s)	1402
BfaI	CTAG	2 cut(s)	750, 1403
BfmI	CTRYAG	1 cut(s)	1394
BfuAI	ACCTGC	1 cut(s)	487
BglI	GCCNNNNNGGC	2 cut(s)	570, 1165
BlpI	GCTNAGC	1 cut(s)	182
BmcAI	AGTACT	1 cut(s)	647
Bme1390I	CCNGG	7 cut(s)	443, 554, 734, 1119, 1208, 1321, 1322
Bme18I	GGWCC	3 cut(s)	4, 592, 1124
BmeT110I	CYCGRG	1 cut(s)	1320
BmgT120I	GGNCC	5 cut(s)	4, 592, 670, 1124, 1335
BmiI	GGNNCC	5 cut(s)	395, 520, 558, 1576, 1604
BmrFI	CCNGG	7 cut(s)	443, 554, 734, 1119, 1208, 1321, 1322
BmsI	GCATC	7 cut(s)	412, 940, 1101, 1323, 1357, 1462, 1577
BpiI	GAAGAC	1 cut(s)	1022
BplI	GAGNNNNNCTC	2 cut(s)	1490, 1522
BpmI	CTGGAG	1 cut(s)	425
Bpu1102I	GCTNAGC	1 cut(s)	182
Bpu14I	TTCGAA	2 cut(s)	419, 899
BpuEI	CTTGAG	2 cut(s)	161, 920
BpuMI	CCSGG	5 cut(s)	554, 734, 1119, 1321, 1322
BsaBI	GATNNNNATC	1 cut(s)	930
BsaHI	GRCGYC	1 cut(s)	126
BsaI	GGTCTC	1 cut(s)	383
BsaJI	CCNNGG	6 cut(s)	568, 849, 1207, 1305, 1320, 1651
BsaWI	WCCGGW	1 cut(s)	1605
Bsc4I	CCNNNNNNNGG	4 cut(s)	465, 739, 760, 986
Bse118I	RCCGGY	1 cut(s)	6
Bse1I	ACTGG	3 cut(s)	769, 1346, 1390
Bse3DI	GCAATG	3 cut(s)	722, 1221, 1671
Bse8I	GATNNNNATC	1 cut(s)	930
BseAI	TCCGGA	1 cut(s)	1605
BseBI	CCWGG	2 cut(s)	443, 1208
BseDI	CCNNGG	6 cut(s)	568, 849, 1207, 1305, 1320, 1651
BseGI	GGATG	8 cut(s)	225, 243, 403, 867, 928, 1033, 1081, 1477
BseJI	GATNNNNATC	1 cut(s)	930
BseLI	CCNNNNNNNGG	4 cut(s)	465, 739, 760, 986
BseMI	GCAATG	3 cut(s)	722, 1221, 1671
BseMII	CTCAG	2 cut(s)	196, 1523
BseNI	ACTGG	3 cut(s)	769, 1346, 1390
BseRI	GAGGAG	4 cut(s)	7, 10, 557, 866
BseX3I	CGGCCG	1 cut(s)	8
BseXI	GCAGC	8 cut(s)	88, 379, 382, 731, 1126, 1285, 1380, 1382
BseYI	CCCAGC	2 cut(s)	83, 1185
BsgI	GTGCAG	2 cut(s)	1043, 1431
Bsh1236I	CGCG	2 cut(s)	330, 1307
Bsh1285I	CGRYCG	4 cut(s)	11, 43, 133, 577
BshFI	GGCC	6 cut(s)	10, 387, 672, 848, 1337, 1444
BsiEI	CGRYCG	4 cut(s)	11, 43, 133, 577
BsiHKAI	GWGCWC	2 cut(s)	349, 798
BsiHKCI	CYCGRG	1 cut(s)	1320
BsiSI	CCGG	9 cut(s)	7, 11, 522, 553, 733, 1118, 1237, 1321, 1606
BslFI	GGGAC	2 cut(s)	281, 1517
BslI	CCNNNNNNNGG	4 cut(s)	465, 739, 760, 986
BsmAI	GTCTC	2 cut(s)	383, 856
BsmFI	GGGAC	2 cut(s)	281, 1517
BsnI	GGCC	6 cut(s)	10, 387, 672, 848, 1337, 1444
Bso31I	GGTCTC	1 cut(s)	383
BsoBI	CYCGRG	1 cut(s)	1320
Bsp119I	TTCGAA	2 cut(s)	419, 899
Bsp1286I	GDGCHC	2 cut(s)	349, 798
Bsp13I	TCCGGA	1 cut(s)	1605
Bsp143I	GATC	6 cut(s)	40, 92, 556, 574, 690, 1574
Bsp1720I	GCTNAGC	1 cut(s)	182
BspANI	GGCC	6 cut(s)	10, 387, 672, 848, 1337, 1444
BspCNI	CTCAG	2 cut(s)	195, 1522
BspEI	TCCGGA	1 cut(s)	1605
BspFNI	CGCG	2 cut(s)	330, 1307
BspLI	GGNNCC	5 cut(s)	395, 520, 558, 1576, 1604
BspMAI	CTGCAG	1 cut(s)	1398
BspMI	ACCTGC	1 cut(s)	487
BspPI	GGATC	5 cut(s)	87, 551, 564, 1569, 1582
BspQI	GCTCTTC	1 cut(s)	1653
BspT104I	TTCGAA	2 cut(s)	419, 899
BspTNI	GGTCTC	1 cut(s)	383
BsrDI	GCAATG	3 cut(s)	722, 1221, 1671
BsrFI	RCCGGY	1 cut(s)	6
BsrI	ACTGG	3 cut(s)	769, 1346, 1390
BssAI	RCCGGY	1 cut(s)	6
BssECI	CCNNGG	6 cut(s)	568, 849, 1207, 1305, 1320, 1651
BssMI	GATC	6 cut(s)	40, 92, 556, 574, 690, 1574
BssNI	GRCGYC	1 cut(s)	126
BssT1I	CCWWGG	1 cut(s)	1651
Bst2UI	CCWGG	2 cut(s)	443, 1208
Bst4CI	ACNGT	2 cut(s)	781, 1021
Bst6I	CTCTTC	8 cut(s)	28, 239, 254, 281, 356, 386, 854, 1653
BstACI	GRCGYC	1 cut(s)	126
BstBI	TTCGAA	2 cut(s)	419, 899
BstC8I	GCNNGC	6 cut(s)	74, 345, 365, 981, 1302, 1446
BstDEI	CTNAG	3 cut(s)	182, 697, 1509
BstDSI	CCRYGG	1 cut(s)	1305
BstF5I	GGATG	8 cut(s)	225, 243, 403, 867, 928, 1033, 1081, 1477
BstFNI	CGCG	2 cut(s)	330, 1307
BstHHI	GCGC	1 cut(s)	72
BstKTI	GATC	6 cut(s)	43, 95, 559, 577, 693, 1577
BstMAI	GTCTC	2 cut(s)	383, 856
BstMBI	GATC	6 cut(s)	40, 92, 556, 574, 690, 1574
BstMCI	CGRYCG	4 cut(s)	11, 43, 133, 577
BstMWI	GCNNNNNNNGC	7 cut(s)	76, 364, 570, 669, 1165, 1174, 1334
BstNI	CCWGG	2 cut(s)	443, 1208
BstNSI	RCATGY	1 cut(s)	712
BstSCI	CCNGG	7 cut(s)	441, 552, 732, 1117, 1206, 1319, 1320
BstSFI	CTRYAG	1 cut(s)	1394
BstUI	CGCG	2 cut(s)	330, 1307
BstV1I	GCAGC	8 cut(s)	88, 379, 382, 731, 1126, 1285, 1380, 1382
BstV2I	GAAGAC	1 cut(s)	1022
BstX2I	RGATCY	2 cut(s)	556, 1574
BstYI	RGATCY	2 cut(s)	556, 1574
BstZI	CGGCCG	1 cut(s)	8
BsuRI	GGCC	6 cut(s)	10, 387, 672, 848, 1337, 1444
BtgI	CCRYGG	1 cut(s)	1305
BtsCI	GGATG	8 cut(s)	225, 243, 403, 867, 928, 1033, 1081, 1477
BtsIMutI	CAGTG	1 cut(s)	777
BveI	ACCTGC	1 cut(s)	487
Cac8I	GCNNGC	6 cut(s)	74, 345, 365, 981, 1302, 1446
CaiI	CAGNNNCTG	1 cut(s)	1628
CfoI	GCGC	1 cut(s)	72
Cfr10I	RCCGGY	1 cut(s)	6
Cfr13I	GGNCC	5 cut(s)	4, 592, 670, 1124, 1335
Cfr42I	CCGCGG	1 cut(s)	1308
Cfr9I	CCCGGG	1 cut(s)	1320
CseI	GACGC	1 cut(s)	916
Csp6I	GTAC	4 cut(s)	646, 772, 1427, 1642
CviAII	CATG	5 cut(s)	515, 709, 1244, 1490, 1546
CviQI	GTAC	4 cut(s)	646, 772, 1427, 1642
DdeI	CTNAG	3 cut(s)	182, 697, 1509
DpnI	GATC	6 cut(s)	42, 94, 558, 576, 692, 1576
DpnII	GATC	6 cut(s)	40, 92, 556, 574, 690, 1574
DrdI	GACNNNNNNGTC	1 cut(s)	125
DseDI	GACNNNNNNGTC	1 cut(s)	125
EaeI	YGGCCR	2 cut(s)	8, 846
EagI	CGGCCG	1 cut(s)	8
Eam1104I	CTCTTC	8 cut(s)	28, 239, 254, 281, 356, 386, 854, 1653
EarI	CTCTTC	8 cut(s)	28, 239, 254, 281, 356, 386, 854, 1653
EciI	GGCGGA	3 cut(s)	85, 350, 445
Ecl136II	GAGCTC	1 cut(s)	347
EclXI	CGGCCG	1 cut(s)	8
Eco130I	CCWWGG	1 cut(s)	1651
Eco24I	GRGCYC	1 cut(s)	349
Eco31I	GGTCTC	1 cut(s)	383
Eco47I	GGWCC	3 cut(s)	4, 592, 1124
Eco52I	CGGCCG	1 cut(s)	8
Eco53kI	GAGCTC	1 cut(s)	347
Eco57I	CTGAAG	1 cut(s)	965
Eco88I	CYCGRG	1 cut(s)	1320
EcoICRI	GAGCTC	1 cut(s)	347
EcoRII	CCWGG	2 cut(s)	441, 1206
EcoT14I	CCWWGG	1 cut(s)	1651
EcoT22I	ATGCAT	1 cut(s)	812
EcoT38I	GRGCYC	1 cut(s)	349
ErhI	CCWWGG	1 cut(s)	1651
FaeI	CATG	5 cut(s)	518, 712, 1247, 1493, 1549
FalI	AAGNNNNNCTT	2 cut(s)	260, 292
FaqI	GGGAC	2 cut(s)	281, 1517
FatI	CATG	5 cut(s)	514, 708, 1243, 1489, 1545
FauI	CCCGC	1 cut(s)	293
FblI	GTMKAC	1 cut(s)	129
FokI	GGATG	8 cut(s)	212, 230, 390, 854, 935, 1040, 1088, 1484
FriOI	GRGCYC	1 cut(s)	349
FspBI	CTAG	2 cut(s)	750, 1403
GlaI	GCGC	1 cut(s)	71
GsaI	CCCAGC	2 cut(s)	87, 1189
GsuI	CTGGAG	1 cut(s)	425
HaeIII	GGCC	6 cut(s)	10, 387, 672, 848, 1337, 1444
HapII	CCGG	9 cut(s)	7, 11, 522, 553, 733, 1118, 1237, 1321, 1606
HgaI	GACGC	1 cut(s)	916
HhaI	GCGC	1 cut(s)	72
Hin1I	GRCGYC	1 cut(s)	126
Hin1II	CATG	5 cut(s)	518, 712, 1247, 1493, 1549
Hin6I	GCGC	1 cut(s)	70
HinP1I	GCGC	1 cut(s)	70
HincII	GTYRAC	1 cut(s)	130
HindII	GTYRAC	1 cut(s)	130
HpaII	CCGG	9 cut(s)	7, 11, 522, 553, 733, 1118, 1237, 1321, 1606
HphI	GGTGA	7 cut(s)	247, 754, 841, 1064, 1120, 1309, 1667
Hpy166II	GTNNAC	2 cut(s)	130, 592
Hpy188III	TCNNGA	7 cut(s)	268, 391, 937, 967, 1252, 1572, 1606
Hpy8I	GTNNAC	2 cut(s)	130, 592
HpyAV	CCTTC	3 cut(s)	940, 1414, 1603
HpyCH4III	ACNGT	2 cut(s)	781, 1021
HpyCH4IV	ACGT	2 cut(s)	126, 1202
HpyF10VI	GCNNNNNNNGC	7 cut(s)	76, 364, 570, 669, 1165, 1174, 1334
HpyF3I	CTNAG	3 cut(s)	182, 697, 1509
HpySE526I	ACGT	2 cut(s)	126, 1202
Hsp92I	GRCGYC	1 cut(s)	126
Hsp92II	CATG	5 cut(s)	518, 712, 1247, 1493, 1549
HspAI	GCGC	1 cut(s)	70
Kpn2I	TCCGGA	1 cut(s)	1605
KspI	CCGCGG	1 cut(s)	1308
Kzo9I	GATC	6 cut(s)	40, 92, 556, 574, 690, 1574
LguI	GCTCTTC	1 cut(s)	1653
LmnI	GCTCC	7 cut(s)	84, 330, 363, 514, 524, 1565, 1608
Lsp1109I	GCAGC	8 cut(s)	88, 379, 382, 731, 1126, 1285, 1380, 1382
LweI	GCATC	7 cut(s)	412, 940, 1101, 1323, 1357, 1462, 1577
MaeI	CTAG	2 cut(s)	750, 1403
MaeII	ACGT	2 cut(s)	126, 1202
MaeIII	GTNAC	2 cut(s)	829, 1398
MalI	GATC	6 cut(s)	42, 94, 558, 576, 692, 1576
MboI	GATC	6 cut(s)	40, 92, 556, 574, 690, 1574
MflI	RGATCY	2 cut(s)	556, 1574
MhlI	GDGCHC	2 cut(s)	349, 798
MluCI	AATT	8 cut(s)	409, 430, 634, 842, 1062, 1216, 1453, 1494
MlyI	GAGTC	5 cut(s)	8, 341, 1141, 1171, 1499
MmeI	TCCRAC	3 cut(s)	51, 705, 765
Mph1103I	ATGCAT	1 cut(s)	812
MroI	TCCGGA	1 cut(s)	1605
MroXI	GAANNNNTTC	1 cut(s)	1217
MseI	TTAA	2 cut(s)	801, 1437
MspA1I	CMGCKG	4 cut(s)	598, 1307, 1373, 1460
MspI	CCGG	9 cut(s)	7, 11, 522, 553, 733, 1118, 1237, 1321, 1606
MspR9I	CCNGG	7 cut(s)	443, 554, 734, 1119, 1208, 1321, 1322
MvaI	CCWGG	2 cut(s)	443, 1208
MvnI	CGCG	2 cut(s)	330, 1307
MwoI	GCNNNNNNNGC	7 cut(s)	76, 364, 570, 669, 1165, 1174, 1334
NciI	CCSGG	5 cut(s)	554, 734, 1119, 1321, 1322
NdeII	GATC	6 cut(s)	40, 92, 556, 574, 690, 1574
NlaIII	CATG	5 cut(s)	518, 712, 1247, 1493, 1549
NlaIV	GGNNCC	5 cut(s)	395, 520, 558, 1576, 1604
NmeAIII	GCCGAG	4 cut(s)	549, 874, 1032, 1185
NmuCI	GTSAC	2 cut(s)	829, 1398
NsiI	ATGCAT	1 cut(s)	812
NspI	RCATGY	1 cut(s)	712
NspV	TTCGAA	2 cut(s)	419, 899
PaqCI	CACCTGC	1 cut(s)	487
PciI	ACATGT	1 cut(s)	708
PciSI	GCTCTTC	1 cut(s)	1653
PcsI	WCGNNNNNNNCGW	6 cut(s)	36, 63, 120, 123, 126, 1447
PdmI	GAANNNNTTC	1 cut(s)	1217
PfeI	GAWTC	5 cut(s)	308, 421, 490, 539, 745
PfoI	TCCNGGA	2 cut(s)	441, 552
Ple19I	CGATCG	2 cut(s)	43, 577
PleI	GAGTC	5 cut(s)	8, 340, 1141, 1170, 1499
PpsI	GAGTC	5 cut(s)	8, 340, 1141, 1170, 1499
PscI	ACATGT	1 cut(s)	708
PsiI	TTATAA	1 cut(s)	1172
Psp124BI	GAGCTC	1 cut(s)	349
Psp6I	CCWGG	2 cut(s)	441, 1206
PspFI	CCCAGC	2 cut(s)	83, 1185
PspGI	CCWGG	2 cut(s)	441, 1206
PspN4I	GGNNCC	5 cut(s)	395, 520, 558, 1576, 1604
PspPI	GGNCC	5 cut(s)	4, 592, 670, 1124, 1335
PstI	CTGCAG	1 cut(s)	1398
PstNI	CAGNNNCTG	1 cut(s)	1628
PsuI	RGATCY	2 cut(s)	556, 1574
PvuI	CGATCG	2 cut(s)	43, 577
PvuII	CAGCTG	2 cut(s)	1373, 1460
RsaI	GTAC	4 cut(s)	647, 773, 1428, 1643
RsaNI	GTAC	4 cut(s)	646, 772, 1427, 1642
SacI	GAGCTC	1 cut(s)	349
SacII	CCGCGG	1 cut(s)	1308
SalI	GTCGAC	1 cut(s)	128
SapI	GCTCTTC	1 cut(s)	1653
SaqAI	TTAA	2 cut(s)	801, 1437
Sau3AI	GATC	6 cut(s)	40, 92, 556, 574, 690, 1574
Sau96I	GGNCC	5 cut(s)	4, 592, 670, 1124, 1335
ScaI	AGTACT	1 cut(s)	647
SchI	GAGTC	5 cut(s)	8, 341, 1141, 1171, 1499
ScrFI	CCNGG	7 cut(s)	443, 554, 734, 1119, 1208, 1321, 1322
SduI	GDGCHC	2 cut(s)	349, 798
SfaNI	GCATC	7 cut(s)	412, 940, 1101, 1323, 1357, 1462, 1577
SfcI	CTRYAG	1 cut(s)	1394
Sfr303I	CCGCGG	1 cut(s)	1308
SfuI	TTCGAA	2 cut(s)	419, 899
SgrBI	CCGCGG	1 cut(s)	1308
SinI	GGWCC	3 cut(s)	4, 592, 1124
SmaI	CCCGGG	1 cut(s)	1322
SmlI	CTYRAG	2 cut(s)	176, 935
SmoI	CTYRAG	2 cut(s)	176, 935
SpeI	ACTAGT	1 cut(s)	1402
Sse9I	AATT	8 cut(s)	409, 430, 634, 842, 1062, 1216, 1453, 1494
SspMI	CTAG	2 cut(s)	750, 1403
SstI	GAGCTC	1 cut(s)	349
StyD4I	CCNGG	7 cut(s)	441, 552, 732, 1117, 1206, 1319, 1320
StyI	CCWWGG	1 cut(s)	1651
TaaI	ACNGT	2 cut(s)	781, 1021
TaiI	ACGT	2 cut(s)	129, 1205
TaqI	TCGA	9 cut(s)	57, 91, 114, 129, 419, 621, 837, 899, 1046
TaqII	GACCGA	1 cut(s)	365
TasI	AATT	8 cut(s)	409, 430, 634, 842, 1062, 1216, 1453, 1494
TatI	WGTACW	2 cut(s)	645, 771
TauI	GCSGC	3 cut(s)	1243, 1307, 1603
TfiI	GAWTC	5 cut(s)	308, 421, 490, 539, 745
Tru1I	TTAA	2 cut(s)	801, 1437
Tru9I	TTAA	2 cut(s)	801, 1437
TscAI	CASTG	1 cut(s)	784
TseFI	GTSAC	2 cut(s)	829, 1398
TseI	GCWGC	8 cut(s)	76, 367, 370, 719, 1114, 1273, 1370, 1393
Tsp45I	GTSAC	2 cut(s)	829, 1398
TspDTI	ATGAA	7 cut(s)	208, 214, 874, 1183, 1210, 1549, 1660
TspGWI	ACGGA	1 cut(s)	283
TspMI	CCCGGG	1 cut(s)	1320
TspRI	CASTG	1 cut(s)	784
VpaK11BI	GGWCC	3 cut(s)	4, 592, 1124
XapI	RAATTY	2 cut(s)	1216, 1453
XceI	RCATGY	1 cut(s)	712
XmaI	CCCGGG	1 cut(s)	1320
XmiI	GTMKAC	1 cut(s)	129
XmnI	GAANNNNTTC	1 cut(s)	1217
XspI	CTAG	2 cut(s)	750, 1403
ZraI	GACGTC	1 cut(s)	127
ZrmI	AGTACT	1 cut(s)	647
Zsp2I	ATGCAT	1 cut(s)	812

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.