AT5G52860

ABC transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0013296
Physical Location & Seq
Reverse (-)
21419590 .. 21421715
2126 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G52860.1

Sequence Viewer

Length: 1770 bp
ATGGAAATACCTCCATCACCTCCGCCGGAGACGGCGGCCTACACATTAACCACCTCTTCAATCTCCTACACCATACCAAAAACCTCTCTCTCCCTCCTCCGCTTCCCGGCGACTGAGCCACCCTCCTTTATCCTCCGCAACATCACTCTCACCGCTCATCCAACCGAGATCCTCGCCGTCGTTGGCCCTTCCGGCGCCGGAAAATCAACTCTCCTTGACATTCTCGCCTCTAAAACCTCCCCAACTTCCGGTTCAATCCTCCTTAACTCCATTCCCATTAACCCTTCCTCTTATCGAAAAATCTCCTCTTACGTTCCCCAACATGACTCTTTCTTCCCTCTCCTCACCGTCTCCGAGACCTTCTCCTTCGCTGCTTGTCTCTTGCTCCCAAACCCATCAATAGTTTCTGAAACCGTAACCTCTCTTCTATCAGAGCTTAACCTAACACATCTTTCCCACACAAGACTCGCTCAAGGCTTATCCGGTGGCGAAAGAAGAAGAGTCTCGATAGGGTTAAGCCTCCTTCACGACCCTTGCTTTCTTCTCCTCGATGAACCCACTTCGGGTTTAGACAGTAAATCCGCTTTTGACGTCATTCACATCCTCAAATCCATCGCTGTGTCAAGACAACGGACCGTGATATTGTCCATTCACCAGCCTAGCTTCAAGATTCTGTCTATCATCGATCGGTTGTTACTTCTTTCAAAAGGAACTGTTGTGTACCACGGAAGACTTGACTCCCTCGAAGGTTTCTTGCTCTTCAAGGGATTTACCGTCCCTCCGCAGCTCAATTCCCTTGAATATGCAATGGAAATACTTCAAGAACTACGAGAATCCGACGGAAACACCGATGCTACTGCTCTCCCTTCAATCGAAAACCGGAAACAGAGAGAAAAACAGAGTATTGTTCGATATAGAAAATCAAGAATCACCGAGATAAGCCTTCTCGCGAGAAGATTCTGGAAGATCATTTACCGGACAAGGCAACTACTTCTAACCAATGCATTAGAAGCCCTTGTAGTTGGTCTTGTCCTAGGAACTATCTACATCAACATCGGAATCGGCAAAGCAGGAATTGAGAAAAGATTCGGTATGTTCGCCTTCACGCTCACTTTTCTCCTCTCTTCAACAACCGAAACCCTCCCGATCTTCATCAACGAGCGTCCAATTCTTCTCAGGGAGACTTCGAGTGGTATTTACAGACTCTCCTCTCACATTCTCGCAAATACACTCGTATTCTTGCCGTACTTGTTCGTTATCTCAATCATTTACTCTGTTTCGGTCTATTTCCTCATTGGTCTCTGCCCCACATGGCAAGCTTTTGGGTACTTCGTTCTCGTGATATGGATCATTCTCCTAATGGCGAACTCTTTTGTTCTCTTCTTGAGCTCTCTTGCCCCAAATTACATTACGGGAACCTCTCTTGTGACAATTCTTCTAGCGGCTTTCTTCTTGTTTTCCGGTTACTTCATTTCCAAGGAAAGTCTTCCCAAGTACTGGCTTTTCATGTACTTCTTCTCAATGTATAAGTATGCATTGGATGCACTTCTGATAAACGAGTACTCGTGCTTAGCCTCCAAGTGTTTGGTCTGGTTGGAGGAAGCTCAAACAAAGATCTGCATGGTTACTGGAGGTGACGTGTTGAAGAAGAAAGGACTTCATGAGAAACAGAGGTGGTTTAATGTTTATGTTTTGTTAGGGTTTTTCGTACTTTATCGTGTGTTGTGTTTTCTTGCTCTCCTTAGAAGAGTTTCTGGTTCAAAGAGGTAA

Protein Analysis

589

Amino Acids

65.93

Weight (kDa)

9.41

Isoelectric Point (pI)

47.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 45 - 188 6e-32 ABC transporter
ABC2_membrane_7 PF19055 218 - 285 6.9e-07 ABC-2 type transporter
ABC2_membrane PF01061 312 - 521 3.4e-48 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013296)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G52860
fragaria_vesca FvH4_2g03830 FvH4_2g03830
malus_domestica MD01G1210800.v1.1
prunus_persica Prupe.2G303100_v2.0.a1
pyrus_communis pycom01g22130 pycom07g25560
rosa_chinensis RchiOBHm_Chr1g0378951
rosa_laevigata RLG00000026406
rosa_multiflora Rmu_sc0006761.1_g000007
rosa_roxburghii Rroxscaffold_4G00280220 Rroxscaffold_4G00280250
rosa_rugosa Rorug01G0411600
rosa_samantha Rh1AG434200 Rh1BG391900 Rh1CG404700 Rh1DG422900
rosa_wichuraiana Rw1G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 594
AccB1I GGYRCC 1 cut(s) 194
AccB7I CCANNNNNTGG 1 cut(s) 1497
AccBSI CCGCTC 1 cut(s) 155
AccII CGCG 1 cut(s) 950
AciI CCGC 8 cut(s) 23, 35, 100, 136, 153, 582, 782, 1442
AclWI GGATC 2 cut(s) 163, 1355
AcyI GRCGYC 2 cut(s) 195, 591
AfaI GTAC 7 cut(s) 722, 1247, 1328, 1496, 1511, 1562, 1710
AfiI CCNNNNNNNGG 4 cut(s) 106, 248, 563, 1497
AflIII ACRYGT 1 cut(s) 1638
AjiI CACGTC 1 cut(s) 1639
AjuI GAANNNNNNNTTGG 2 cut(s) 235, 267
AluBI AGCT 6 cut(s) 436, 663, 787, 1319, 1389, 1604
AluI AGCT 6 cut(s) 436, 663, 787, 1319, 1389, 1604
Alw21I GWGCWC 1 cut(s) 1391
Alw26I GTCTC 7 cut(s) 23, 350, 355, 383, 508, 1175, 1304
AlwI GGATC 2 cut(s) 163, 1355
AoxI GGCC 2 cut(s) 36, 184
ApeKI GCWGC 2 cut(s) 371, 784
Asp700I GAANNNNTTC 4 cut(s) 816, 1085, 1485, 1750
AspA2I CCTAGG 1 cut(s) 1033
AspLEI GCGC 1 cut(s) 197
AspS9I GGNCC 2 cut(s) 185, 633
AsuC2I CCSGG 1 cut(s) 107
AsuHPI GGTGA 6 cut(s) 9, 142, 337, 644, 922, 1646
AvaII GGWCC 1 cut(s) 633
AvrII CCTAGG 1 cut(s) 1033
BanI GGYRCC 1 cut(s) 194
BanII GRGCYC 1 cut(s) 1391
BarI GAAGNNNNNNTAC 4 cut(s) 408, 440, 956, 988
BauI CACGAG 2 cut(s) 1337, 1564
BbsI GAAGAC 2 cut(s) 736, 1478
Bbv12I GWGCWC 1 cut(s) 1391
BbvI GCAGC 2 cut(s) 358, 796
BccI CCATC 3 cut(s) 22, 403, 620
BceAI ACGGC 3 cut(s) 48, 161, 1228
BcgI CGANNNNNNTGC 2 cut(s) 839, 873
BcnI CCSGG 1 cut(s) 107
BcoDI GTCTC 7 cut(s) 23, 350, 355, 383, 508, 1175, 1304
BfaI CTAG 3 cut(s) 660, 1034, 1439
BfoI RGCGCY 1 cut(s) 198
BglI GCCNNNNNGGC 1 cut(s) 192
BglII AGATCT 1 cut(s) 1614
BisI GCNGC 4 cut(s) 36, 372, 785, 1443
BlnI CCTAGG 1 cut(s) 1033
BlpI GCTNAGC 1 cut(s) 1570
BlsI GCNGC 4 cut(s) 37, 373, 786, 1444
BmcAI AGTACT 2 cut(s) 1496, 1562
Bme1390I CCNGG 1 cut(s) 107
Bme18I GGWCC 1 cut(s) 633
BmgBI CACGTC 1 cut(s) 1639
BmgT120I GGNCC 2 cut(s) 185, 633
BmiI GGNNCC 2 cut(s) 196, 1417
BmrFI CCNGG 1 cut(s) 107
BmsI GCATC 2 cut(s) 841, 1531
BpiI GAAGAC 2 cut(s) 736, 1478
BplI GAGNNNNNCTC 4 cut(s) 107, 139, 347, 379
BpmI CTGGAG 1 cut(s) 1650
Bpu1102I GCTNAGC 1 cut(s) 1570
BpuEI CTTGAG 2 cut(s) 456, 1405
BpuMI CCSGG 1 cut(s) 107
Bsa29I ATCGAT 1 cut(s) 684
BsaBI GATNNNNATC 2 cut(s) 1151, 1346
BsaHI GRCGYC 2 cut(s) 195, 591
BsaI GGTCTC 2 cut(s) 350, 1304
BsaJI CCNNGG 3 cut(s) 724, 1033, 1476
BsaWI WCCGGW 5 cut(s) 248, 482, 879, 975, 1460
BsaXI ACNNNNNCTCC 6 cut(s) 763, 793, 1190, 1220, 1623, 1653
Bsc4I CCNNNNNNNGG 4 cut(s) 106, 248, 563, 1497
Bse1I ACTGG 2 cut(s) 1502, 1633
Bse3DI GCAATG 1 cut(s) 813
Bse8I GATNNNNATC 2 cut(s) 1151, 1346
BseCI ATCGAT 1 cut(s) 684
BseDI CCNNGG 3 cut(s) 724, 1033, 1476
BseGI GGATG 3 cut(s) 157, 600, 1546
BseJI GATNNNNATC 2 cut(s) 1151, 1346
BseLI CCNNNNNNNGG 4 cut(s) 106, 248, 563, 1497
BseMI GCAATG 1 cut(s) 813
BseMII CTCAG 2 cut(s) 105, 1189
BseNI ACTGG 2 cut(s) 1502, 1633
BseRI GAGGAG 6 cut(s) 86, 295, 332, 536, 1109, 1198
BseXI GCAGC 2 cut(s) 358, 796
Bsh1236I CGCG 1 cut(s) 950
Bsh1285I CGRYCG 1 cut(s) 688
BshFI GGCC 2 cut(s) 38, 186
BshNI GGYRCC 1 cut(s) 194
BshVI ATCGAT 1 cut(s) 684
BsiEI CGRYCG 1 cut(s) 688
BsiHKAI GWGCWC 1 cut(s) 1391
BsiSI CCGG 9 cut(s) 26, 107, 192, 198, 249, 483, 880, 976, 1461
BslFI GGGAC 1 cut(s) 761
BslI CCNNNNNNNGG 4 cut(s) 106, 248, 563, 1497
BsmAI GTCTC 7 cut(s) 23, 350, 355, 383, 508, 1175, 1304
BsmBI CGTCTC 2 cut(s) 23, 355
BsmFI GGGAC 1 cut(s) 761
BsnI GGCC 2 cut(s) 38, 186
Bso31I GGTCTC 2 cut(s) 350, 1304
Bsp1286I GDGCHC 1 cut(s) 1391
Bsp143I GATC 6 cut(s) 168, 685, 966, 1146, 1347, 1614
Bsp1720I GCTNAGC 1 cut(s) 1570
Bsp68I TCGCGA 1 cut(s) 950
BspACI CCGC 8 cut(s) 23, 35, 100, 136, 153, 582, 782, 1442
BspANI GGCC 2 cut(s) 38, 186
BspCNI CTCAG 2 cut(s) 106, 1188
BspDI ATCGAT 1 cut(s) 684
BspFNI CGCG 1 cut(s) 950
BspHI TCATGA 1 cut(s) 1660
BspLI GGNNCC 2 cut(s) 196, 1417
BspPI GGATC 2 cut(s) 163, 1355
BspQI GCTCTTC 1 cut(s) 764
BspT107I GGYRCC 1 cut(s) 194
BspTNI GGTCTC 2 cut(s) 350, 1304
BsrBI CCGCTC 1 cut(s) 155
BsrDI GCAATG 1 cut(s) 813
BsrI ACTGG 2 cut(s) 1502, 1633
BssECI CCNNGG 3 cut(s) 724, 1033, 1476
BssMI GATC 6 cut(s) 168, 685, 966, 1146, 1347, 1614
BssNI GRCGYC 2 cut(s) 195, 591
BssSI CACGAG 2 cut(s) 1337, 1564
BssT1I CCWWGG 2 cut(s) 1033, 1476
Bst2BI CACGAG 2 cut(s) 1337, 1564
Bst4CI ACNGT 6 cut(s) 349, 415, 575, 637, 715, 775
Bst6I CTCTTC 7 cut(s) 61, 429, 493, 764, 1129, 1385, 1741
BstACI GRCGYC 2 cut(s) 195, 591
BstAPI GCANNNNNTGC 1 cut(s) 1541
BstC8I GCNNGC 1 cut(s) 1317
BstDEI CTNAG 4 cut(s) 114, 1175, 1570, 1742
BstDSI CCRYGG 1 cut(s) 724
BstF5I GGATG 3 cut(s) 157, 600, 1546
BstFNI CGCG 1 cut(s) 950
BstH2I RGCGCY 1 cut(s) 198
BstHHI GCGC 1 cut(s) 197
BstKTI GATC 6 cut(s) 171, 688, 969, 1149, 1350, 1617
BstMAI GTCTC 7 cut(s) 23, 350, 355, 383, 508, 1175, 1304
BstMBI GATC 6 cut(s) 168, 685, 966, 1146, 1347, 1614
BstMCI CGRYCG 1 cut(s) 688
BstMWI GCNNNNNNNGC 3 cut(s) 192, 1010, 1541
BstSCI CCNGG 1 cut(s) 105
BstUI CGCG 1 cut(s) 950
BstV1I GCAGC 2 cut(s) 358, 796
BstV2I GAAGAC 2 cut(s) 736, 1478
BstX2I RGATCY 2 cut(s) 168, 1614
BstXI CCANNNNNNTGG 1 cut(s) 1585
BstYI RGATCY 2 cut(s) 168, 1614
Bsu15I ATCGAT 1 cut(s) 684
BsuRI GGCC 2 cut(s) 38, 186
BsuTUI ATCGAT 1 cut(s) 684
BtgI CCRYGG 1 cut(s) 724
BtgZI GCGATG 1 cut(s) 598
BtrI CACGTC 1 cut(s) 1639
BtsCI GGATG 3 cut(s) 157, 600, 1546
BtuMI TCGCGA 1 cut(s) 950
Cac8I GCNNGC 1 cut(s) 1317
CciI TCATGA 1 cut(s) 1660
CfoI GCGC 1 cut(s) 197
Cfr13I GGNCC 2 cut(s) 185, 633
ClaI ATCGAT 1 cut(s) 684
CpoI CGGWCCG 1 cut(s) 633
CseI GACGC 1 cut(s) 1151
Csp6I GTAC 7 cut(s) 721, 1246, 1327, 1495, 1510, 1561, 1709
CspI CGGWCCG 1 cut(s) 633
CviAII CATG 5 cut(s) 323, 1311, 1507, 1621, 1661
CviQI GTAC 7 cut(s) 721, 1246, 1327, 1495, 1510, 1561, 1709
DdeI CTNAG 4 cut(s) 114, 1175, 1570, 1742
DinI GGCGCC 1 cut(s) 196
DpnI GATC 6 cut(s) 170, 687, 968, 1148, 1349, 1616
DpnII GATC 6 cut(s) 168, 685, 966, 1146, 1347, 1614
Eam1104I CTCTTC 7 cut(s) 61, 429, 493, 764, 1129, 1385, 1741
EarI CTCTTC 7 cut(s) 61, 429, 493, 764, 1129, 1385, 1741
EciI GGCGGA 1 cut(s) 12
Ecl136II GAGCTC 1 cut(s) 1389
Eco130I CCWWGG 2 cut(s) 1033, 1476
Eco24I GRGCYC 1 cut(s) 1391
Eco31I GGTCTC 2 cut(s) 350, 1304
Eco47I GGWCC 1 cut(s) 633
Eco53kI GAGCTC 1 cut(s) 1389
EcoICRI GAGCTC 1 cut(s) 1389
EcoT14I CCWWGG 2 cut(s) 1033, 1476
EcoT22I ATGCAT 2 cut(s) 1006, 1537
EcoT38I GRGCYC 1 cut(s) 1391
EgeI GGCGCC 1 cut(s) 196
EheI GGCGCC 1 cut(s) 196
ErhI CCWWGG 2 cut(s) 1033, 1476
Esp3I CGTCTC 2 cut(s) 23, 355
FaeI CATG 5 cut(s) 326, 1314, 1510, 1624, 1664
FaqI GGGAC 1 cut(s) 761
FatI CATG 5 cut(s) 322, 1310, 1506, 1620, 1660
Fnu4HI GCNGC 4 cut(s) 36, 372, 785, 1443
FokI GGATG 3 cut(s) 144, 587, 1553
FriOI GRGCYC 1 cut(s) 1391
Fsp4HI GCNGC 4 cut(s) 36, 372, 785, 1443
FspBI CTAG 3 cut(s) 660, 1034, 1439
GlaI GCGC 1 cut(s) 196
GluI GCNGC 4 cut(s) 36, 372, 785, 1443
GsuI CTGGAG 1 cut(s) 1650
HaeII RGCGCY 1 cut(s) 198
HaeIII GGCC 2 cut(s) 38, 186
HapII CCGG 9 cut(s) 26, 107, 192, 198, 249, 483, 880, 976, 1461
HgaI GACGC 1 cut(s) 1151
HhaI GCGC 1 cut(s) 197
Hin1I GRCGYC 2 cut(s) 195, 591
Hin1II CATG 5 cut(s) 326, 1314, 1510, 1624, 1664
Hin6I GCGC 1 cut(s) 195
HinP1I GCGC 1 cut(s) 195
HindIII AAGCTT 1 cut(s) 1317
HpaII CCGG 9 cut(s) 26, 107, 192, 198, 249, 483, 880, 976, 1461
HphI GGTGA 6 cut(s) 9, 142, 337, 644, 922, 1646
Hpy166II GTNNAC 1 cut(s) 721
Hpy188I TCNGA 6 cut(s) 355, 409, 433, 838, 1058, 1551
Hpy8I GTNNAC 1 cut(s) 721
Hpy99I CGWCG 2 cut(s) 182, 842
HpyAV CCTTC 9 cut(s) 198, 294, 370, 376, 533, 740, 876, 953, 1111
HpyCH4III ACNGT 6 cut(s) 349, 415, 575, 637, 715, 775
HpyCH4IV ACGT 3 cut(s) 312, 591, 1638
HpyCH4V TGCA 5 cut(s) 806, 1004, 1535, 1544, 1620
HpyF10VI GCNNNNNNNGC 3 cut(s) 192, 1010, 1541
HpyF3I CTNAG 4 cut(s) 114, 1175, 1570, 1742
HpySE526I ACGT 3 cut(s) 312, 591, 1638
Hsp92I GRCGYC 2 cut(s) 195, 591
Hsp92II CATG 5 cut(s) 326, 1314, 1510, 1624, 1664
HspAI GCGC 1 cut(s) 195
KasI GGCGCC 1 cut(s) 194
Kzo9I GATC 6 cut(s) 168, 685, 966, 1146, 1347, 1614
LguI GCTCTTC 1 cut(s) 764
LmnI GCTCC 1 cut(s) 390
Lsp1109I GCAGC 2 cut(s) 358, 796
LweI GCATC 2 cut(s) 841, 1531
MaeI CTAG 3 cut(s) 660, 1034, 1439
MaeII ACGT 3 cut(s) 312, 591, 1638
MaeIII GTNAC 6 cut(s) 415, 693, 1426, 1463, 1624, 1634
MalI GATC 6 cut(s) 170, 687, 968, 1148, 1349, 1616
MbiI CCGCTC 1 cut(s) 155
MboI GATC 6 cut(s) 168, 685, 966, 1146, 1347, 1614
MflI RGATCY 2 cut(s) 168, 1614
MhlI GDGCHC 1 cut(s) 1391
MluCI AATT 5 cut(s) 790, 1074, 1167, 1402, 1431
Mly113I GGCGCC 1 cut(s) 195
MlyI GAGTC 5 cut(s) 320, 459, 510, 731, 1197
MmeI TCCRAC 3 cut(s) 185, 861, 1575
Mph1103I ATGCAT 2 cut(s) 1006, 1537
MroXI GAANNNNTTC 4 cut(s) 816, 1085, 1485, 1750
MseI TTAA 6 cut(s) 47, 264, 279, 438, 515, 1680
MslI CAYNNNNRTG 1 cut(s) 617
MspI CCGG 9 cut(s) 26, 107, 192, 198, 249, 483, 880, 976, 1461
MspR9I CCNGG 1 cut(s) 107
MvnI CGCG 1 cut(s) 950
MwoI GCNNNNNNNGC 3 cut(s) 192, 1010, 1541
NarI GGCGCC 1 cut(s) 195
NciI CCSGG 1 cut(s) 107
NdeII GATC 6 cut(s) 168, 685, 966, 1146, 1347, 1614
NlaIII CATG 5 cut(s) 326, 1314, 1510, 1624, 1664
NlaIV GGNNCC 2 cut(s) 196, 1417
NmuCI GTSAC 2 cut(s) 1426, 1634
NruI TCGCGA 1 cut(s) 950
NsiI ATGCAT 2 cut(s) 1006, 1537
PagI TCATGA 1 cut(s) 1660
PciSI GCTCTTC 1 cut(s) 764
PcsI WCGNNNNNNNCGW 1 cut(s) 846
PdmI GAANNNNTTC 4 cut(s) 816, 1085, 1485, 1750
PfeI GAWTC 6 cut(s) 670, 833, 927, 957, 1059, 1086
PflMI CCANNNNNTGG 1 cut(s) 1497
PkrI GCNGC 4 cut(s) 37, 373, 786, 1444
Ple19I CGATCG 1 cut(s) 688
PleI GAGTC 5 cut(s) 320, 459, 509, 731, 1197
PluTI GGCGCC 1 cut(s) 198
PpsI GAGTC 5 cut(s) 320, 459, 509, 731, 1197
Psp124BI GAGCTC 1 cut(s) 1391
PspN4I GGNNCC 2 cut(s) 196, 1417
PspPI GGNCC 2 cut(s) 185, 633
PsuI RGATCY 2 cut(s) 168, 1614
PvuI CGATCG 1 cut(s) 688
RruI TCGCGA 1 cut(s) 950
RsaI GTAC 7 cut(s) 722, 1247, 1328, 1496, 1511, 1562, 1710
RsaNI GTAC 7 cut(s) 721, 1246, 1327, 1495, 1510, 1561, 1709
RseI CAYNNNNRTG 1 cut(s) 617
Rsr2I CGGWCCG 1 cut(s) 633
RsrII CGGWCCG 1 cut(s) 633
SacI GAGCTC 1 cut(s) 1391
SapI GCTCTTC 1 cut(s) 764
SaqAI TTAA 6 cut(s) 47, 264, 279, 438, 515, 1680
SatI GCNGC 4 cut(s) 36, 372, 785, 1443
Sau3AI GATC 6 cut(s) 168, 685, 966, 1146, 1347, 1614
Sau96I GGNCC 2 cut(s) 185, 633
ScaI AGTACT 2 cut(s) 1496, 1562
SchI GAGTC 5 cut(s) 320, 459, 510, 731, 1197
ScrFI CCNGG 1 cut(s) 107
SduI GDGCHC 1 cut(s) 1391
SfaNI GCATC 2 cut(s) 841, 1531
SfoI GGCGCC 1 cut(s) 196
SinI GGWCC 1 cut(s) 633
SmiMI CAYNNNNRTG 1 cut(s) 617
SmlI CTYRAG 2 cut(s) 471, 1384
SmoI CTYRAG 2 cut(s) 471, 1384
Sse9I AATT 5 cut(s) 790, 1074, 1167, 1402, 1431
SsiI CCGC 8 cut(s) 23, 35, 100, 136, 153, 582, 782, 1442
SspDI GGCGCC 1 cut(s) 194
SspMI CTAG 3 cut(s) 660, 1034, 1439
SstI GAGCTC 1 cut(s) 1391
StyD4I CCNGG 1 cut(s) 105
StyI CCWWGG 2 cut(s) 1033, 1476
TaaI ACNGT 6 cut(s) 349, 415, 575, 637, 715, 775
TaiI ACGT 3 cut(s) 315, 594, 1641
TaqI TCGA 8 cut(s) 295, 506, 549, 684, 744, 873, 910, 1187
TaqII GACCGA 1 cut(s) 1270
TasI AATT 5 cut(s) 790, 1074, 1167, 1402, 1431
TatI WGTACW 3 cut(s) 1494, 1509, 1560
TauI GCSGC 2 cut(s) 38, 1445
TfiI GAWTC 6 cut(s) 670, 833, 927, 957, 1059, 1086
Tru1I TTAA 6 cut(s) 47, 264, 279, 438, 515, 1680
Tru9I TTAA 6 cut(s) 47, 264, 279, 438, 515, 1680
TseFI GTSAC 2 cut(s) 1426, 1634
TseI GCWGC 2 cut(s) 371, 784
Tsp45I GTSAC 2 cut(s) 1426, 1634
TspDTI ATGAA 5 cut(s) 567, 1141, 1459, 1495, 1649
TspGWI ACGGA 3 cut(s) 646, 741, 855
Van91I CCANNNNNTGG 1 cut(s) 1497
VpaK11BI GGWCC 1 cut(s) 633
XmaJI CCTAGG 1 cut(s) 1033
XmnI GAANNNNTTC 4 cut(s) 816, 1085, 1485, 1750
XspI CTAG 3 cut(s) 660, 1034, 1439
ZraI GACGTC 1 cut(s) 592
ZrmI AGTACT 2 cut(s) 1496, 1562
Zsp2I ATGCAT 2 cut(s) 1006, 1537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.