Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0013296

Physical Location & Seq

Genomic Coordinates Reverse (-)

19841639 .. 19843448

Gene Structure 1810 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g22130.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGAATCAGATGCACCACCAACCCAACCACCCTCCAAAACTTACGAACTAACAGCCTCTTCCATATCCTACACCAAATCAATCACAGCCGCCACCACCTTCTCCCCATTTCACCTCCTCTTCAAGCAATGCACCTTCCCCACCCCCACCTACATCCTCAAAGACATCTCCCTCACCGCCTACCCCTCCGAAATCCTCGCCATTGTGGGCCCTAGCGGCGCCGGAAAATCAACCCTCCTTGACATCTTAGCCGCCCGAAGATCACCCACAAGCGGCGCTCTCCTCCTCAACTCTTTCCCCATCAGCGCTTCCTCATTCCGCAAGCTCTCAGCCTATGTCCCTCAGCACGACGCATGCCTTCCCCTCCTCACTGTTTTCGAAACCTTTGCTTTTGCCGCAAGCCTCCTCGTCCCTAACCCTAACCCTTCAAACATTGCCGCCATTGTCTCCTCTCTTCTTACCGAGCTCCGGCTCACACATTTGTCCAACACCCGCCTCGGCCAAGGCCTATCGGGCGGCGAACGCAGGCGTGTCTCCATAGGCCTCAGCCTTCTCCACGACCCTTCTGTCCTCCTTCTCGACGAGCCCACCTCAGGTCTCGACAGCACCTCTGCTTTCAACGTAATCCAAACCCTAAAATCCATCTGCACGTCGCGTCACCGCACTGTGATTTTATCAATCCACCAACCCAGCTTCAAAATCCTCTCCACCGTTGATAGGATTCTCTTGCTATCAAAAGGGTCAGTTGTCCACCACGGAACCCTTTCCTCTCTCGAAGTTTTTCTGCTCTCTAATGGCTTCACTGTCCCTCCACAACTCAATGCCTTGGAATATACCATGGAAATTCTCAACCACCTCCCTCCCATCACATCTACAAAAACCACATCATCACCTCCTAATGATCCTATTGATCATGAAAAGCAGCCATTTAGGCCAGTCATTAGATACAAAAGCTCTAGAATTCAAGAGATATTGGCTCTATACAACCGGTTTTGGAAAATCATCTACAGAACAAGGCAGCTCCTTTTAACAAACACTCTTGAAGCACTTCTTGTAGGTCTTGTTTTGGGAACTATTTACATCAACATTGGATTCGACAAGCAAGGAATCGAAAAGCGGTTTGGCCTCTTCGCCTTCACTCTTACATTCCTCCTCTCCTCCACCACCGAAGCCCTACCAATCTTCATCAACGAAAGGCCGATCCTCCTCCGAGAAACCTCCGGCGGAATCTACCGGCTCTCCTCATACCTCATCGCCAACACTCTCGTTTTCTTGCCCTACTTGCTTGCCATTGCGTTTGCTTATTTTGTTCTGGTCATATGGATCATTGTTCTAATGGCGAATTCATTCGTCTTGTTCTTGAGCTCTCTGGCTCCCAACTACATCGCCGGGACTTCGCTCGTGACGATATTTTTGGGCGGGTTTTTTCTCTTCTCCGGCTACTTCATCTCCCAAGGTAACATGCCCAAGTACTGGCTCTTCATGCACTTCTTCTCCATGTACAAATATGCCCTGGATGCCCTTCTGATCAACGAGTACGGTTGCCTTGTGTCAACGTGTTTGATATGGTACCAAGAGAGTAACAGTGATAGTAAAGTTTGCATGGTGACGGGAGGCGACGTGTTGCAGAAGAGAGGGCTGCATGAAGGGCAGAGGTGGACTAATATCTACATCCTGCTAGGGTTTTTCGTGTTCTATCGTGTGCTTTGTTTGATGGTTTTGATCAGAAGGGTTTCCAGATCAAAGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

584

Amino Acids

64.9

Weight (kDa)

9.35

Isoelectric Point (pI)

49.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52860
fragaria_vesca	FvH4_2g03830 FvH4_2g03830
malus_domestica	MD01G1210800.v1.1
prunus_persica	Prupe.2G303100_v2.0.a1
pyrus_communis	pycom01g22130 pycom07g25560
rosa_chinensis	RchiOBHm_Chr1g0378951
rosa_laevigata	RLG00000026406
rosa_multiflora	Rmu_sc0006761.1_g000007
rosa_roxburghii	Rroxscaffold_4G00280220 Rroxscaffold_4G00280250
rosa_rugosa	Rorug01G0411600
rosa_samantha	Rh1AG434200 Rh1BG391900 Rh1CG404700 Rh1DG422900
rosa_wichuraiana	Rw1G037900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	566
Acc65I	GGTACC	1 cut(s)	1569
AccB1I	GGYRCC	2 cut(s)	218, 1569
AccB7I	CCANNNNNTGG	1 cut(s)	1473
AccII	CGCG	1 cut(s)	655
AclWI	GGATC	3 cut(s)	896, 1195, 1331
AcoI	YGGCCR	1 cut(s)	499
AcsI	RAATTY	3 cut(s)	843, 960, 1342
AcyI	GRCGYC	1 cut(s)	219
AfaI	GTAC	4 cut(s)	1472, 1502, 1538, 1571
AfeI	AGCGCT	1 cut(s)	307
AfiI	CCNNNNNNNGG	5 cut(s)	272, 468, 593, 717, 1473
AflIII	ACRYGT	2 cut(s)	1556, 1620
AgeI	ACCGGT	1 cut(s)	987
AgsI	TTSAA	6 cut(s)	124, 429, 619, 697, 965, 1043
AjiI	CACGTC	2 cut(s)	651, 1621
AjnI	CCWGG	1 cut(s)	1512
AjuI	GAANNNNNNNTTGG	2 cut(s)	1104, 1136
AluBI	AGCT	6 cut(s)	325, 466, 693, 954, 1021, 1365
AluI	AGCT	6 cut(s)	325, 466, 693, 954, 1021, 1365
Alw21I	GWGCWC	2 cut(s)	468, 1367
Alw26I	GTCTC	3 cut(s)	451, 538, 602
AlwI	GGATC	3 cut(s)	896, 1195, 1331
Aor51HI	AGCGCT	1 cut(s)	307
AoxI	GGCC	7 cut(s)	208, 499, 505, 541, 932, 1123, 1196
ApaI	GGGCCC	1 cut(s)	212
ApeKI	GCWGC	3 cut(s)	922, 1018, 1639
ApoI	RAATTY	3 cut(s)	843, 960, 1342
ArsI	GACNNNNNNTTYG	2 cut(s)	1396, 1428
AsiGI	ACCGGT	1 cut(s)	987
Asp700I	GAANNNNTTC	5 cut(s)	763, 780, 1047, 1346, 1732
Asp718I	GGTACC	1 cut(s)	1569
AspLEI	GCGC	3 cut(s)	221, 278, 308
AspS9I	GGNCC	2 cut(s)	208, 209
AsuC2I	CCSGG	1 cut(s)	1390
AsuHPI	GGTGA	6 cut(s)	104, 166, 255, 650, 882, 1618
AsuII	TTCGAA	1 cut(s)	378
AxyI	CCTNAGG	1 cut(s)	592
BaeGI	GKGCMC	1 cut(s)	212
BanI	GGYRCC	2 cut(s)	218, 1569
BanII	GRGCYC	4 cut(s)	212, 468, 588, 1367
BarI	GAAGNNNNNNTAC	2 cut(s)	1463, 1495
BauI	CACGAG	1 cut(s)	1400
Bbv12I	GWGCWC	2 cut(s)	468, 1367
BbvCI	CCTCAGC	2 cut(s)	342, 545
BbvI	GCAGC	3 cut(s)	934, 1030, 1626
BccI	CCATC	4 cut(s)	308, 650, 872, 1708
BcgI	CGANNNNNNTGC	2 cut(s)	368, 402
BciT130I	CCWGG	1 cut(s)	1514
BclI	TGATCA	3 cut(s)	910, 1527, 1722
BcnI	CCSGG	1 cut(s)	1390
BcoDI	GTCTC	3 cut(s)	451, 538, 602
BfaI	CTAG	3 cut(s)	213, 957, 1679
BfmI	CTRYAG	1 cut(s)	1006
BfoI	RGCGCY	3 cut(s)	222, 279, 309
BglI	GCCNNNNNGGC	3 cut(s)	216, 513, 931
BmcAI	AGTACT	1 cut(s)	1472
Bme1390I	CCNGG	2 cut(s)	1390, 1514
BmgBI	CACGTC	2 cut(s)	651, 1621
BmgT120I	GGNCC	2 cut(s)	208, 209
BmiI	GGNNCC	5 cut(s)	210, 220, 760, 1374, 1571
BmrFI	CCNGG	2 cut(s)	1390, 1514
BmsI	GCATC	1 cut(s)	1507
BplI	GAGNNNNNCTC	2 cut(s)	575, 607
Bpu10I	CCTNAGC	2 cut(s)	342, 545
Bpu14I	TTCGAA	1 cut(s)	378
BpuEI	CTTGAG	1 cut(s)	1381
BpuMI	CCSGG	1 cut(s)	1390
BsaHI	GRCGYC	1 cut(s)	219
BsaI	GGTCTC	1 cut(s)	602
BsaJI	CCNNGG	7 cut(s)	496, 502, 754, 825, 837, 1453, 1512
BsaWI	WCCGGW	1 cut(s)	987
Bsc4I	CCNNNNNNNGG	5 cut(s)	272, 468, 593, 717, 1473
Bse118I	RCCGGY	2 cut(s)	987, 1233
Bse1I	ACTGG	2 cut(s)	935, 1478
Bse21I	CCTNAGG	1 cut(s)	592
Bse3DI	GCAATG	3 cut(s)	134, 432, 1290
BseBI	CCWGG	1 cut(s)	1514
BseDI	CCNNGG	7 cut(s)	496, 502, 754, 825, 837, 1453, 1512
BseGI	GGATG	3 cut(s)	153, 1522, 1671
BseLI	CCNNNNNNNGG	5 cut(s)	272, 468, 593, 717, 1473
BseMI	GCAATG	3 cut(s)	134, 432, 1290
BseMII	CTCAG	4 cut(s)	342, 356, 559, 606
BseNI	ACTGG	2 cut(s)	935, 1478
BseSI	GKGCMC	1 cut(s)	212
BseXI	GCAGC	3 cut(s)	934, 1030, 1626
BseYI	CCCAGC	1 cut(s)	689
BsgI	GTGCAG	1 cut(s)	631
Bsh1236I	CGCG	1 cut(s)	655
BshFI	GGCC	7 cut(s)	210, 501, 507, 543, 934, 1125, 1198
BshNI	GGYRCC	2 cut(s)	218, 1569
BshTI	ACCGGT	1 cut(s)	987
BsiHKAI	GWGCWC	2 cut(s)	468, 1367
BsiSI	CCGG	7 cut(s)	222, 469, 988, 1221, 1234, 1389, 1437
BslFI	GGGAC	4 cut(s)	323, 395, 791, 1405
BslI	CCNNNNNNNGG	5 cut(s)	272, 468, 593, 717, 1473
BsmAI	GTCTC	3 cut(s)	451, 538, 602
BsmFI	GGGAC	4 cut(s)	323, 395, 791, 1405
BsnI	GGCC	7 cut(s)	210, 501, 507, 543, 934, 1125, 1198
Bso31I	GGTCTC	1 cut(s)	602
Bsp119I	TTCGAA	1 cut(s)	378
Bsp120I	GGGCCC	1 cut(s)	208
Bsp1286I	GDGCHC	4 cut(s)	212, 468, 588, 1367
Bsp1407I	TGTACA	1 cut(s)	1500
Bsp143I	GATC	8 cut(s)	260, 901, 910, 1200, 1323, 1527, 1722, 1739
Bsp19I	CCATGG	1 cut(s)	837
BspANI	GGCC	7 cut(s)	210, 501, 507, 543, 934, 1125, 1198
BspCNI	CTCAG	4 cut(s)	341, 355, 558, 605
BspFNI	CGCG	1 cut(s)	655
BspHI	TCATGA	1 cut(s)	913
BspLI	GGNNCC	5 cut(s)	210, 220, 760, 1374, 1571
BspPI	GGATC	3 cut(s)	896, 1195, 1331
BspQI	GCTCTTC	1 cut(s)	1484
BspT104I	TTCGAA	1 cut(s)	378
BspT107I	GGYRCC	2 cut(s)	218, 1569
BspTNI	GGTCTC	1 cut(s)	602
BsrDI	GCAATG	3 cut(s)	134, 432, 1290
BsrFI	RCCGGY	2 cut(s)	987, 1233
BsrGI	TGTACA	1 cut(s)	1500
BsrI	ACTGG	2 cut(s)	935, 1478
BssAI	RCCGGY	2 cut(s)	987, 1233
BssECI	CCNNGG	7 cut(s)	496, 502, 754, 825, 837, 1453, 1512
BssMI	GATC	8 cut(s)	260, 901, 910, 1200, 1323, 1527, 1722, 1739
BssNI	GRCGYC	1 cut(s)	219
BssSI	CACGAG	1 cut(s)	1400
BssT1I	CCWWGG	4 cut(s)	502, 825, 837, 1453
Bst2BI	CACGAG	1 cut(s)	1400
Bst2UI	CCWGG	1 cut(s)	1514
Bst4CI	ACNGT	6 cut(s)	373, 667, 712, 805, 1541, 1586
Bst6I	CTCTTC	7 cut(s)	64, 125, 459, 1133, 1436, 1484, 1625
BstACI	GRCGYC	1 cut(s)	219
BstAUI	TGTACA	1 cut(s)	1500
BstBI	TTCGAA	1 cut(s)	378
BstC8I	GCNNGC	5 cut(s)	323, 355, 400, 527, 1287
BstDEI	CTNAG	5 cut(s)	247, 328, 342, 545, 592
BstDSI	CCRYGG	2 cut(s)	754, 837
BstF5I	GGATG	3 cut(s)	153, 1522, 1671
BstFNI	CGCG	1 cut(s)	655
BstH2I	RGCGCY	3 cut(s)	222, 279, 309
BstHHI	GCGC	3 cut(s)	221, 278, 308
BstKTI	GATC	8 cut(s)	263, 904, 913, 1203, 1326, 1530, 1725, 1742
BstMAI	GTCTC	3 cut(s)	451, 538, 602
BstMBI	GATC	8 cut(s)	260, 901, 910, 1200, 1323, 1527, 1722, 1739
BstMWI	GCNNNNNNNGC	9 cut(s)	216, 395, 513, 522, 931, 1282, 1483, 1517, 1648
BstNI	CCWGG	1 cut(s)	1514
BstNSI	RCATGY	2 cut(s)	357, 1465
BstSCI	CCNGG	2 cut(s)	1388, 1512
BstSFI	CTRYAG	1 cut(s)	1006
BstSLI	GKGCMC	1 cut(s)	212
BstUI	CGCG	1 cut(s)	655
BstV1I	GCAGC	3 cut(s)	934, 1030, 1626
Bsu36I	CCTNAGG	1 cut(s)	592
BsuRI	GGCC	7 cut(s)	210, 501, 507, 543, 934, 1125, 1198
BtgI	CCRYGG	2 cut(s)	754, 837
BtgZI	GCGATG	2 cut(s)	1237, 1369
BtrI	CACGTC	2 cut(s)	651, 1621
BtsCI	GGATG	3 cut(s)	153, 1522, 1671
BtsIMutI	CAGTG	4 cut(s)	369, 663, 801, 1591
Cac8I	GCNNGC	5 cut(s)	323, 355, 400, 527, 1287
CciI	TCATGA	1 cut(s)	913
CfoI	GCGC	3 cut(s)	221, 278, 308
Cfr10I	RCCGGY	2 cut(s)	987, 1233
Cfr13I	GGNCC	2 cut(s)	208, 209
CseI	GACGC	2 cut(s)	359, 644
Csp6I	GTAC	4 cut(s)	1471, 1501, 1537, 1570
CspAI	ACCGGT	1 cut(s)	987
CviAII	CATG	8 cut(s)	354, 838, 914, 1462, 1483, 1498, 1603, 1643
CviQI	GTAC	4 cut(s)	1471, 1501, 1537, 1570
DdeI	CTNAG	5 cut(s)	247, 328, 342, 545, 592
DinI	GGCGCC	1 cut(s)	220
DpnI	GATC	8 cut(s)	262, 903, 912, 1202, 1325, 1529, 1724, 1741
DpnII	GATC	8 cut(s)	260, 901, 910, 1200, 1323, 1527, 1722, 1739
DrdI	GACNNNNNNGTC	1 cut(s)	566
DseDI	GACNNNNNNGTC	1 cut(s)	566
EaeI	YGGCCR	1 cut(s)	499
Eam1104I	CTCTTC	7 cut(s)	64, 125, 459, 1133, 1436, 1484, 1625
EarI	CTCTTC	7 cut(s)	64, 125, 459, 1133, 1436, 1484, 1625
EciI	GGCGGA	1 cut(s)	1239
Ecl136II	GAGCTC	2 cut(s)	466, 1365
Eco130I	CCWWGG	4 cut(s)	502, 825, 837, 1453
Eco147I	AGGCCT	2 cut(s)	507, 543
Eco24I	GRGCYC	4 cut(s)	212, 468, 588, 1367
Eco31I	GGTCTC	1 cut(s)	602
Eco47III	AGCGCT	1 cut(s)	307
Eco53kI	GAGCTC	2 cut(s)	466, 1365
Eco81I	CCTNAGG	1 cut(s)	592
EcoICRI	GAGCTC	2 cut(s)	466, 1365
EcoO109I	RGGNCCY	1 cut(s)	209
EcoRI	GAATTC	2 cut(s)	960, 1342
EcoRII	CCWGG	1 cut(s)	1512
EcoT14I	CCWWGG	4 cut(s)	502, 825, 837, 1453
EcoT38I	GRGCYC	4 cut(s)	212, 468, 588, 1367
EgeI	GGCGCC	1 cut(s)	220
EheI	GGCGCC	1 cut(s)	220
ErhI	CCWWGG	4 cut(s)	502, 825, 837, 1453
FaeI	CATG	8 cut(s)	357, 841, 917, 1465, 1486, 1501, 1606, 1646
FalI	AAGNNNNNCTT	2 cut(s)	1035, 1067
FaqI	GGGAC	4 cut(s)	323, 395, 791, 1405
FatI	CATG	8 cut(s)	353, 837, 913, 1461, 1482, 1497, 1602, 1642
FauI	CCCGC	2 cut(s)	500, 1412
FauNDI	CATATG	1 cut(s)	1319
FbaI	TGATCA	3 cut(s)	910, 1527, 1722
FokI	GGATG	3 cut(s)	140, 1529, 1658
FriOI	GRGCYC	4 cut(s)	212, 468, 588, 1367
FspBI	CTAG	3 cut(s)	213, 957, 1679
GlaI	GCGC	3 cut(s)	220, 277, 307
GsaI	CCCAGC	1 cut(s)	693
HaeII	RGCGCY	3 cut(s)	222, 279, 309
HaeIII	GGCC	7 cut(s)	210, 501, 507, 543, 934, 1125, 1198
HapII	CCGG	7 cut(s)	222, 469, 988, 1221, 1234, 1389, 1437
HgaI	GACGC	2 cut(s)	359, 644
HhaI	GCGC	3 cut(s)	221, 278, 308
Hin1I	GRCGYC	1 cut(s)	219
Hin1II	CATG	8 cut(s)	357, 841, 917, 1465, 1486, 1501, 1606, 1646
Hin6I	GCGC	3 cut(s)	219, 276, 306
HinP1I	GCGC	3 cut(s)	219, 276, 306
HincII	GTYRAC	1 cut(s)	1554
HindII	GTYRAC	1 cut(s)	1554
HinfI	GANTC	5 cut(s)	5, 721, 1092, 1107, 1227
HpaII	CCGG	7 cut(s)	222, 469, 988, 1221, 1234, 1389, 1437
HphI	GGTGA	6 cut(s)	104, 166, 255, 650, 882, 1618
Hpy166II	GTNNAC	3 cut(s)	751, 1554, 1659
Hpy188I	TCNGA	5 cut(s)	10, 190, 1211, 1527, 1727
Hpy8I	GTNNAC	3 cut(s)	751, 1554, 1659
Hpy99I	CGWCG	4 cut(s)	353, 584, 655, 1622
HpyCH4III	ACNGT	6 cut(s)	373, 667, 712, 805, 1541, 1586
HpyCH4IV	ACGT	4 cut(s)	621, 650, 1556, 1620
HpyCH4V	TGCA	7 cut(s)	14, 132, 648, 1486, 1602, 1627, 1642
HpyF10VI	GCNNNNNNNGC	9 cut(s)	216, 395, 513, 522, 931, 1282, 1483, 1517, 1648
HpyF3I	CTNAG	5 cut(s)	247, 328, 342, 545, 592
HpySE526I	ACGT	4 cut(s)	621, 650, 1556, 1620
Hsp92I	GRCGYC	1 cut(s)	219
Hsp92II	CATG	8 cut(s)	357, 841, 917, 1465, 1486, 1501, 1606, 1646
HspAI	GCGC	3 cut(s)	219, 276, 306
KasI	GGCGCC	1 cut(s)	218
KpnI	GGTACC	1 cut(s)	1573
Ksp22I	TGATCA	3 cut(s)	910, 1527, 1722
Kzo9I	GATC	8 cut(s)	260, 901, 910, 1200, 1323, 1527, 1722, 1739
LguI	GCTCTTC	1 cut(s)	1484
LmnI	GCTCC	3 cut(s)	471, 1026, 1378
Lsp1109I	GCAGC	3 cut(s)	934, 1030, 1626
LweI	GCATC	1 cut(s)	1507
MaeI	CTAG	3 cut(s)	213, 957, 1679
MaeII	ACGT	4 cut(s)	621, 650, 1556, 1620
MaeIII	GTNAC	5 cut(s)	656, 1402, 1457, 1580, 1606
MalI	GATC	8 cut(s)	262, 903, 912, 1202, 1325, 1529, 1724, 1741
MboI	GATC	8 cut(s)	260, 901, 910, 1200, 1323, 1527, 1722, 1739
MhlI	GDGCHC	4 cut(s)	212, 468, 588, 1367
MluCI	AATT	3 cut(s)	843, 960, 1342
Mly113I	GGCGCC	1 cut(s)	219
MmeI	TCCRAC	1 cut(s)	510
MroXI	GAANNNNTTC	5 cut(s)	763, 780, 1047, 1346, 1732
MseI	TTAA	1 cut(s)	1028
MspI	CCGG	7 cut(s)	222, 469, 988, 1221, 1234, 1389, 1437
MspR9I	CCNGG	2 cut(s)	1390, 1514
MvaI	CCWGG	1 cut(s)	1514
MvnI	CGCG	1 cut(s)	655
MwoI	GCNNNNNNNGC	9 cut(s)	216, 395, 513, 522, 931, 1282, 1483, 1517, 1648
NarI	GGCGCC	1 cut(s)	219
NciI	CCSGG	1 cut(s)	1390
NcoI	CCATGG	1 cut(s)	837
NdeI	CATATG	1 cut(s)	1319
NdeII	GATC	8 cut(s)	260, 901, 910, 1200, 1323, 1527, 1722, 1739
NlaIII	CATG	8 cut(s)	357, 841, 917, 1465, 1486, 1501, 1606, 1646
NlaIV	GGNNCC	5 cut(s)	210, 220, 760, 1374, 1571
NmeAIII	GCCGAG	1 cut(s)	477
NmuCI	GTSAC	3 cut(s)	656, 1402, 1606
NspI	RCATGY	2 cut(s)	357, 1465
NspV	TTCGAA	1 cut(s)	378
PaeI	GCATGC	1 cut(s)	357
PagI	TCATGA	1 cut(s)	913
PceI	AGGCCT	2 cut(s)	507, 543
PciSI	GCTCTTC	1 cut(s)	1484
PcsI	WCGNNNNNNNCGW	1 cut(s)	1403
PdmI	GAANNNNTTC	5 cut(s)	763, 780, 1047, 1346, 1732
PfeI	GAWTC	5 cut(s)	5, 721, 1092, 1107, 1227
PflMI	CCANNNNNTGG	1 cut(s)	1473
PinAI	ACCGGT	1 cut(s)	987
PluTI	GGCGCC	1 cut(s)	222
Psp124BI	GAGCTC	2 cut(s)	468, 1367
Psp6I	CCWGG	1 cut(s)	1512
PspFI	CCCAGC	1 cut(s)	689
PspGI	CCWGG	1 cut(s)	1512
PspN4I	GGNNCC	5 cut(s)	210, 220, 760, 1374, 1571
PspOMI	GGGCCC	1 cut(s)	208
PspPI	GGNCC	2 cut(s)	208, 209
RsaI	GTAC	4 cut(s)	1472, 1502, 1538, 1571
RsaNI	GTAC	4 cut(s)	1471, 1501, 1537, 1570
SacI	GAGCTC	2 cut(s)	468, 1367
SapI	GCTCTTC	1 cut(s)	1484
SaqAI	TTAA	1 cut(s)	1028
Sau3AI	GATC	8 cut(s)	260, 901, 910, 1200, 1323, 1527, 1722, 1739
Sau96I	GGNCC	2 cut(s)	208, 209
ScaI	AGTACT	1 cut(s)	1472
ScrFI	CCNGG	2 cut(s)	1390, 1514
SduI	GDGCHC	4 cut(s)	212, 468, 588, 1367
SfaNI	GCATC	1 cut(s)	1507
SfcI	CTRYAG	1 cut(s)	1006
SfoI	GGCGCC	1 cut(s)	220
SfuI	TTCGAA	1 cut(s)	378
SmlI	CTYRAG	1 cut(s)	1360
SmoI	CTYRAG	1 cut(s)	1360
SphI	GCATGC	1 cut(s)	357
Sse9I	AATT	3 cut(s)	843, 960, 1342
SseBI	AGGCCT	2 cut(s)	507, 543
SspDI	GGCGCC	1 cut(s)	218
SspMI	CTAG	3 cut(s)	213, 957, 1679
SstI	GAGCTC	2 cut(s)	468, 1367
StuI	AGGCCT	2 cut(s)	507, 543
StyD4I	CCNGG	2 cut(s)	1388, 1512
StyI	CCWWGG	4 cut(s)	502, 825, 837, 1453
TaaI	ACNGT	6 cut(s)	373, 667, 712, 805, 1541, 1586
TaiI	ACGT	4 cut(s)	624, 653, 1559, 1623
TaqI	TCGA	6 cut(s)	378, 579, 600, 774, 1095, 1110
TasI	AATT	3 cut(s)	843, 960, 1342
TatI	WGTACW	2 cut(s)	1470, 1500
TauI	GCSGC	7 cut(s)	92, 219, 254, 276, 398, 440, 519
TfiI	GAWTC	5 cut(s)	5, 721, 1092, 1107, 1227
Tru1I	TTAA	1 cut(s)	1028
Tru9I	TTAA	1 cut(s)	1028
TscAI	CASTG	4 cut(s)	376, 670, 808, 1591
TseFI	GTSAC	3 cut(s)	656, 1402, 1606
TseI	GCWGC	3 cut(s)	922, 1018, 1639
Tsp45I	GTSAC	3 cut(s)	656, 1402, 1606
TspDTI	ATGAA	6 cut(s)	930, 1174, 1335, 1435, 1471, 1659
TspGWI	ACGGA	1 cut(s)	771
TspRI	CASTG	4 cut(s)	376, 670, 808, 1591
Van91I	CCANNNNNTGG	1 cut(s)	1473
XapI	RAATTY	3 cut(s)	843, 960, 1342
XbaI	TCTAGA	1 cut(s)	956
XceI	RCATGY	2 cut(s)	357, 1465
XmnI	GAANNNNTTC	5 cut(s)	763, 780, 1047, 1346, 1732
XspI	CTAG	3 cut(s)	213, 957, 1679
ZrmI	AGTACT	1 cut(s)	1472

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.