AT5G67265

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
26839378 .. 26839998
621 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G67265.1

Sequence Viewer

Length: 237 bp
ATGAACCTAAAATCCACGAAGGAAATGGAGACTGAAAAAAGAAAAGAGGATGGATCATCATCAAAAGTGGTGGTGGAAACAACGGAGCAACGTTCCTCGGCGGGGAAAGGCACAGAGCAAAGAAATGTACAAGTGGTTCATCAATCTCATCCCAAAACTAGCGGCGACGTTCTAGTCGGAGCTGCTGCTGCCGTTGAATCCACCCTTCAATCTGCCAAAGAAGTCATCTCTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

78

Amino Acids

8.36

Weight (kDa)

8.05

Isoelectric Point (pI)

52.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0016196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G67265
fragaria_vesca FvH4_1g16720
malus_domestica MD02G1178400.v1.1
prunus_persica Prupe.6G229400_v2.0.a1
rosa_laevigata RLG00000017524
rosa_multiflora Rmu_co8325987.1_g000001
rosa_rugosa Rorug02G0136900
rosa_samantha Rh2AG188200 Rh2AG188300 Rh2BG199200 Rh2BG199300 Rh2CG193300 Rh2DG194400 Rh2DG194500
rosa_wichuraiana Rw2G014780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 173
AciI CCGC 2 cut(s) 101, 162
AclI AACGTT 1 cut(s) 91
AclWI GGATC 1 cut(s) 61
AfaI GTAC 1 cut(s) 129
AfiI CCNNNNNNNGG 1 cut(s) 102
AgsI TTSAA 2 cut(s) 197, 209
AloI GAACNNNNNNTCC 1 cut(s) 28
AluBI AGCT 1 cut(s) 182
AluI AGCT 1 cut(s) 182
Alw26I GTCTC 1 cut(s) 23
AlwI GGATC 1 cut(s) 61
ApeKI GCWGC 3 cut(s) 182, 185, 188
BbvI GCAGC 3 cut(s) 169, 172, 175
BccI CCATC 1 cut(s) 44
BceAI ACGGC 1 cut(s) 176
BcoDI GTCTC 1 cut(s) 23
BfaI CTAG 2 cut(s) 159, 173
BisI GCNGC 4 cut(s) 163, 183, 186, 189
BlsI GCNGC 4 cut(s) 164, 184, 187, 190
BsaBI GATNNNNATC 1 cut(s) 58
BsaJI CCNNGG 1 cut(s) 96
Bsc4I CCNNNNNNNGG 1 cut(s) 102
Bse8I GATNNNNATC 1 cut(s) 58
BseDI CCNNGG 1 cut(s) 96
BseGI GGATG 2 cut(s) 55, 148
BseJI GATNNNNATC 1 cut(s) 58
BseLI CCNNNNNNNGG 1 cut(s) 102
BseXI GCAGC 3 cut(s) 169, 172, 175
BslI CCNNNNNNNGG 1 cut(s) 102
BsmAI GTCTC 1 cut(s) 23
Bsp1407I TGTACA 1 cut(s) 127
Bsp143I GATC 1 cut(s) 53
BspACI CCGC 2 cut(s) 101, 162
BspPI GGATC 1 cut(s) 61
BsrGI TGTACA 1 cut(s) 127
BssECI CCNNGG 1 cut(s) 96
BssMI GATC 1 cut(s) 53
BstAUI TGTACA 1 cut(s) 127
BstF5I GGATG 2 cut(s) 55, 148
BstKTI GATC 1 cut(s) 56
BstMAI GTCTC 1 cut(s) 23
BstMBI GATC 1 cut(s) 53
BstMWI GCNNNNNNNGC 1 cut(s) 188
BstV1I GCAGC 3 cut(s) 169, 172, 175
BtsCI GGATG 2 cut(s) 55, 148
Csp6I GTAC 1 cut(s) 128
CspCI CAANNNNNGTGG 2 cut(s) 51, 86
CviJI RGCY 1 cut(s) 182
CviKI_1 RGCY 1 cut(s) 182
CviQI GTAC 1 cut(s) 128
DpnI GATC 1 cut(s) 55
DpnII GATC 1 cut(s) 53
DrdI GACNNNNNNGTC 1 cut(s) 173
DseDI GACNNNNNNGTC 1 cut(s) 173
FauI CCCGC 1 cut(s) 94
Fnu4HI GCNGC 4 cut(s) 163, 183, 186, 189
FokI GGATG 2 cut(s) 62, 135
Fsp4HI GCNGC 4 cut(s) 163, 183, 186, 189
FspBI CTAG 2 cut(s) 159, 173
GluI GCNGC 4 cut(s) 163, 183, 186, 189
HinfI GANTC 1 cut(s) 197
Hpy188I TCNGA 1 cut(s) 179
Hpy99I CGWCG 1 cut(s) 170
HpyAV CCTTC 2 cut(s) 13, 215
HpyCH4IV ACGT 2 cut(s) 91, 168
HpyF10VI GCNNNNNNNGC 1 cut(s) 188
HpySE526I ACGT 2 cut(s) 91, 168
Kzo9I GATC 1 cut(s) 53
LmnI GCTCC 2 cut(s) 85, 179
Lsp1109I GCAGC 3 cut(s) 169, 172, 175
MaeI CTAG 2 cut(s) 159, 173
MaeII ACGT 2 cut(s) 91, 168
MalI GATC 1 cut(s) 55
MboI GATC 1 cut(s) 53
MmeI TCCRAC 1 cut(s) 157
MnlI CCTC 2 cut(s) 40, 106
MwoI GCNNNNNNNGC 1 cut(s) 188
NdeII GATC 1 cut(s) 53
NmeAIII GCCGAG 1 cut(s) 77
PfeI GAWTC 1 cut(s) 197
PkrI GCNGC 4 cut(s) 164, 184, 187, 190
Psp1406I AACGTT 1 cut(s) 91
PsrI GAACNNNNNNTAC 2 cut(s) 120, 152
RsaI GTAC 1 cut(s) 129
RsaNI GTAC 1 cut(s) 128
SatI GCNGC 4 cut(s) 163, 183, 186, 189
Sau3AI GATC 1 cut(s) 53
SetI ASST 4 cut(s) 9, 94, 171, 184
SgeI CNNG 6 cut(s) 28, 109, 114, 143, 171, 185
SsiI CCGC 2 cut(s) 101, 162
SspMI CTAG 2 cut(s) 159, 173
TaiI ACGT 2 cut(s) 94, 171
TatI WGTACW 1 cut(s) 127
TauI GCSGC 1 cut(s) 165
TfiI GAWTC 1 cut(s) 197
TseI GCWGC 3 cut(s) 182, 185, 188
TspDTI ATGAA 2 cut(s) 17, 128
TspGWI ACGGA 1 cut(s) 98
XcmI CCANNNNNNNNNTGG 1 cut(s) 22
XspI CTAG 2 cut(s) 159, 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.