Basic Information
Type: gene
Biological Identity
arabidopsis_thaliana
Physical Location & Seq
Reverse (-)
115665 .. 117185
ATCG01050.1
Length: 1521 bp
GTGTATCTTGTCTTTACCACGAATGATTTTCCTTGGTTAACAATAATTGTTGTTTTTCCAATATCTGCTGGTTCATTAATGTTATTTCTCCCGCATAGGGGAAATAAAGTCAATAAATGGTATACTATATGCATTTGCATCTTAGAACTTCTTCTAACGACCTACGCTTTTTGTTATAATTTTAAAATGGACGATCCATTAATTCAACTGTCCGAAGATTATAAATGGATCGATTTTTTTGATTTTTACTGGAGAATGGGAATAGATGGACTTTCTATAGGAACTATTTTACTGACGGGATTTATTACTACTTTAGCCACTTTAGCGGCTTTTCCAGTTACTCGGGATTCCCGATTTTTTCATTTCCTGATGTTAGCAATGTACAGCGGTCAAATAGGATCATTTTCTTCTCGGGATCTTCTACTTTTTTTCATCATGTGGGAATTAGAATTAATTCCCGTTTATCTACTTTTATCCATGTGGGGTGGAAAGAAACGTCTGTATTCGGCTACAAAATTTATTTTGTACACGGCAGGAAGTTCTATTTTTTTATTAATAGGAGTTTTAGGTATAAGTTTATATGGTTCGAACGAACCAACATTAAATTTAGAACTCTTAGCTAATAAATCCTATCCTGTTACACTTGAAATACTATTTTATATTGGATTTCTTATTGCTTTTGCCGTCAAATCACCGATTATACCTTTACATACTTGGTTACCTGACACCCACGGTGAGGCACATTACAGTACCTGTATGCTTCTCGCTGGAATCTTATTAAAAATGGGAGCCTATGGGTTGGTTCGAATCAATATGGAATTATTACCCCACGCTCATTCTATGTTTTCTCCTTGGTTGTTGGTAGTCGGTACAATCCAAATAATTTATGCAGCTTCAACATCTCCCGGTCAACGTAATTTAAAAAAGAGAATAGCCTATTCTTCTGTATCTCATATGGGTTTTATAATTATAGGTATTAGTTCTATAACGGATCCTGGACTTAATGGAGCTATTTTACAAATAATTTCTCATGGATTTATTGGCGCTGCACTTTTTTTCTTGGCAGGAACGAGTTATGATAGAATTAGGCTTGTTTATCTTGATGAAATGGGTGGAATGGCTATCTCCATTCCAAAAATATTTACAATGTTCACTATTTTATCGATGGCTTCCCTTGCATTGCCGGGCATGAGTGGTTTTATTGCAGAATTCATTGTTTTTTTTGGAATAATTACCAGCCAAAAATATTTCTTAATTTCCAAAATTTTCATTATTTTTGTAATGGCAATTGGAATGATATTAACTCCTATATATTTATTATCTATGTTACGCCAAATGTTCTATGGATACAAGTTAATTAATATCAAAAACTTTTCTTTTTTTGATTCTGGACCCCGAGAGTTATTTCTTTCAATCTCTATTCTTTTACCCATAATTGGTATTGGGATTTATCCTGATTTTGTGCTCTCATTAGCAAGTGACAAGGTCGAATCCATTTTATCTAATTATTTTTATGGATAG
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
Protein Analysis
8.16
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| Proton_antipo_M |
PF00361 |
137 - 421 |
1.2e-59 |
NADH:quinone oxidoreductase/Mrp antiporter, TM |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0020222)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AanI |
TTATAA |
3 cut(s)
|
177, 222, 965 |
| AccI |
GTMKAC |
1 cut(s)
|
122 |
| AciI |
CCGC |
3 cut(s)
|
92, 326, 387 |
| AclWI |
GGATC |
6 cut(s)
|
188, 236, 406, 423, 986, 999 |
| AcsI |
RAATTY |
4 cut(s)
|
515, 604, 1208, 1263 |
| AfaI |
GTAC |
4 cut(s)
|
383, 527, 751, 871 |
| AfiI |
CCNNNNNNNGG |
4 cut(s)
|
97, 98, 736, 1436 |
| AgsI |
TTSAA |
4 cut(s)
|
206, 647, 897, 1413 |
| AjnI |
CCWGG |
1 cut(s)
|
994 |
| AluBI |
AGCT |
3 cut(s)
|
620, 893, 1010 |
| AluI |
AGCT |
3 cut(s)
|
620, 893, 1010 |
| Alw21I |
GWGCWC |
1 cut(s)
|
1467 |
| AlwI |
GGATC |
6 cut(s)
|
188, 236, 406, 423, 986, 999 |
| AlwNI |
CAGNNNCTG |
1 cut(s)
|
753 |
| Ama87I |
CYCGRG |
3 cut(s)
|
342, 411, 1395 |
| ApeKI |
GCWGC |
2 cut(s)
|
890, 1046 |
| ApoI |
RAATTY |
4 cut(s)
|
515, 604, 1208, 1263 |
| AseI |
ATTAAT |
5 cut(s)
|
77, 200, 452, 554, 1359 |
| Asp700I |
GAANNNNTTC |
2 cut(s)
|
150, 453 |
| AspLEI |
GCGC |
1 cut(s)
|
1046 |
| AspS9I |
GGNCC |
1 cut(s)
|
1391 |
| AsuC2I |
CCSGG |
2 cut(s)
|
906, 1185 |
| AsuHPI |
GGTGA |
2 cut(s)
|
684, 746 |
| AsuII |
TTCGAA |
2 cut(s)
|
587, 805 |
| AvaI |
CYCGRG |
3 cut(s)
|
342, 411, 1395 |
| AvaII |
GGWCC |
1 cut(s)
|
1391 |
| BamHI |
GGATCC |
1 cut(s)
|
991 |
| Bbv12I |
GWGCWC |
1 cut(s)
|
1467 |
| BbvI |
GCAGC |
2 cut(s)
|
902, 1033 |
| BccI |
CCATC |
2 cut(s)
|
260, 1159 |
| BceAI |
ACGGC |
2 cut(s)
|
546, 668 |
| BciT130I |
CCWGG |
1 cut(s)
|
996 |
| BciVI |
GTATCC |
1 cut(s)
|
1340 |
| BcnI |
CCSGG |
2 cut(s)
|
906, 1185 |
| BfmI |
CTRYAG |
1 cut(s)
|
276 |
| BfoI |
RGCGCY |
1 cut(s)
|
1047 |
| BfuI |
GTATCC |
1 cut(s)
|
1340 |
| BisI |
GCNGC |
3 cut(s)
|
327, 891, 1047 |
| BlsI |
GCNGC |
3 cut(s)
|
328, 892, 1048 |
| Bme1390I |
CCNGG |
3 cut(s)
|
906, 996, 1185 |
| Bme18I |
GGWCC |
1 cut(s)
|
1391 |
| BmeT110I |
CYCGRG |
3 cut(s)
|
342, 411, 1395 |
| BmgT120I |
GGNCC |
1 cut(s)
|
1391 |
| BmiI |
GGNNCC |
3 cut(s)
|
790, 993, 1393 |
| BmrFI |
CCNGG |
3 cut(s)
|
906, 996, 1185 |
| BmsI |
GCATC |
1 cut(s)
|
147 |
| BpmI |
CTGGAG |
1 cut(s)
|
271 |
| Bpu14I |
TTCGAA |
2 cut(s)
|
587, 805 |
| BpuMI |
CCSGG |
2 cut(s)
|
906, 1185 |
| Bsa29I |
ATCGAT |
2 cut(s)
|
231, 1163 |
| BsaJI |
CCNNGG |
3 cut(s)
|
32, 730, 851 |
| Bsc4I |
CCNNNNNNNGG |
4 cut(s)
|
97, 98, 736, 1436 |
| Bse1I |
ACTGG |
2 cut(s)
|
254, 335 |
| Bse3DI |
GCAATG |
2 cut(s)
|
384, 1178 |
| BseBI |
CCWGG |
1 cut(s)
|
996 |
| BseCI |
ATCGAT |
2 cut(s)
|
231, 1163 |
| BseDI |
CCNNGG |
3 cut(s)
|
32, 730, 851 |
| BseLI |
CCNNNNNNNGG |
4 cut(s)
|
97, 98, 736, 1436 |
| BseMI |
GCAATG |
2 cut(s)
|
384, 1178 |
| BseNI |
ACTGG |
2 cut(s)
|
254, 335 |
| BseXI |
GCAGC |
2 cut(s)
|
902, 1033 |
| BsgI |
GTGCAG |
1 cut(s)
|
1032 |
| BshVI |
ATCGAT |
2 cut(s)
|
231, 1163 |
| BsiHKAI |
GWGCWC |
1 cut(s)
|
1467 |
| BsiHKCI |
CYCGRG |
3 cut(s)
|
342, 411, 1395 |
| BsiSI |
CCGG |
2 cut(s)
|
906, 1184 |
| BslI |
CCNNNNNNNGG |
4 cut(s)
|
97, 98, 736, 1436 |
| BsoBI |
CYCGRG |
3 cut(s)
|
342, 411, 1395 |
| Bsp119I |
TTCGAA |
2 cut(s)
|
587, 805 |
| Bsp1286I |
GDGCHC |
1 cut(s)
|
1467 |
| Bsp1407I |
TGTACA |
2 cut(s)
|
381, 525 |
| Bsp143I |
GATC |
5 cut(s)
|
193, 228, 398, 415, 991 |
| BspACI |
CCGC |
3 cut(s)
|
92, 326, 387 |
| BspDI |
ATCGAT |
2 cut(s)
|
231, 1163 |
| BspLI |
GGNNCC |
3 cut(s)
|
790, 993, 1393 |
| BspPI |
GGATC |
6 cut(s)
|
188, 236, 406, 423, 986, 999 |
| BspT104I |
TTCGAA |
2 cut(s)
|
587, 805 |
| BsrDI |
GCAATG |
2 cut(s)
|
384, 1178 |
| BsrGI |
TGTACA |
2 cut(s)
|
381, 525 |
| BsrI |
ACTGG |
2 cut(s)
|
254, 335 |
| BssECI |
CCNNGG |
3 cut(s)
|
32, 730, 851 |
| BssMI |
GATC |
5 cut(s)
|
193, 228, 398, 415, 991 |
| BssNAI |
GTATAC |
1 cut(s)
|
123 |
| BssT1I |
CCWWGG |
2 cut(s)
|
32, 851 |
| Bst1107I |
GTATAC |
1 cut(s)
|
123 |
| Bst2UI |
CCWGG |
1 cut(s)
|
996 |
| Bst4CI |
ACNGT |
3 cut(s)
|
210, 734, 749 |
| BstAUI |
TGTACA |
2 cut(s)
|
381, 525 |
| BstBI |
TTCGAA |
2 cut(s)
|
587, 805 |
| BstDEI |
CTNAG |
2 cut(s)
|
142, 616 |
| BstDSI |
CCRYGG |
1 cut(s)
|
730 |
| BstEII |
GGTNACC |
1 cut(s)
|
717 |
| BstH2I |
RGCGCY |
1 cut(s)
|
1047 |
| BstHHI |
GCGC |
1 cut(s)
|
1046 |
| BstKTI |
GATC |
5 cut(s)
|
196, 231, 401, 418, 994 |
| BstMBI |
GATC |
5 cut(s)
|
193, 228, 398, 415, 991 |
| BstMWI |
GCNNNNNNNGC |
2 cut(s)
|
323, 1175 |
| BstNI |
CCWGG |
1 cut(s)
|
996 |
| BstPI |
GGTNACC |
1 cut(s)
|
717 |
| BstSCI |
CCNGG |
3 cut(s)
|
904, 994, 1183 |
| BstSFI |
CTRYAG |
1 cut(s)
|
276 |
| BstV1I |
GCAGC |
2 cut(s)
|
902, 1033 |
| BstX2I |
RGATCY |
2 cut(s)
|
415, 991 |
| BstYI |
RGATCY |
2 cut(s)
|
415, 991 |
| BstZ17I |
GTATAC |
1 cut(s)
|
123 |
| Bsu15I |
ATCGAT |
2 cut(s)
|
231, 1163 |
| BsuI |
GTATCC |
1 cut(s)
|
1340 |
| BsuTUI |
ATCGAT |
2 cut(s)
|
231, 1163 |
| BtgI |
CCRYGG |
1 cut(s)
|
730 |
| CaiI |
CAGNNNCTG |
1 cut(s)
|
753 |
| CfoI |
GCGC |
1 cut(s)
|
1046 |
| Cfr13I |
GGNCC |
1 cut(s)
|
1391 |
| ClaI |
ATCGAT |
2 cut(s)
|
231, 1163 |
| Csp6I |
GTAC |
4 cut(s)
|
382, 526, 750, 870 |
| CviAII |
CATG |
4 cut(s)
|
436, 478, 1031, 1189 |
| CviQI |
GTAC |
4 cut(s)
|
382, 526, 750, 870 |
| DdeI |
CTNAG |
2 cut(s)
|
142, 616 |
| DpnI |
GATC |
5 cut(s)
|
195, 230, 400, 417, 993 |
| DpnII |
GATC |
5 cut(s)
|
193, 228, 398, 415, 991 |
| DraI |
TTTAAA |
2 cut(s)
|
184, 921 |
| Eco130I |
CCWWGG |
2 cut(s)
|
32, 851 |
| Eco47I |
GGWCC |
1 cut(s)
|
1391 |
| Eco88I |
CYCGRG |
3 cut(s)
|
342, 411, 1395 |
| Eco91I |
GGTNACC |
1 cut(s)
|
717 |
| EcoO65I |
GGTNACC |
1 cut(s)
|
717 |
| EcoRI |
GAATTC |
1 cut(s)
|
1208 |
| EcoRII |
CCWGG |
1 cut(s)
|
994 |
| EcoT14I |
CCWWGG |
2 cut(s)
|
32, 851 |
| EcoT22I |
ATGCAT |
1 cut(s)
|
134 |
| ErhI |
CCWWGG |
2 cut(s)
|
32, 851 |
| FaeI |
CATG |
4 cut(s)
|
439, 481, 1034, 1192 |
| FatI |
CATG |
4 cut(s)
|
435, 477, 1030, 1188 |
| FauI |
CCCGC |
1 cut(s)
|
99 |
| FauNDI |
CATATG |
1 cut(s)
|
954 |
| FblI |
GTMKAC |
1 cut(s)
|
122 |
| Fnu4HI |
GCNGC |
3 cut(s)
|
327, 891, 1047 |
| Fsp4HI |
GCNGC |
3 cut(s)
|
327, 891, 1047 |
| GlaI |
GCGC |
1 cut(s)
|
1045 |
| GluI |
GCNGC |
3 cut(s)
|
327, 891, 1047 |
| GsuI |
CTGGAG |
1 cut(s)
|
271 |
| HaeII |
RGCGCY |
1 cut(s)
|
1047 |
| HapII |
CCGG |
2 cut(s)
|
906, 1184 |
| HhaI |
GCGC |
1 cut(s)
|
1046 |
| Hin1II |
CATG |
4 cut(s)
|
439, 481, 1034, 1192 |
| Hin6I |
GCGC |
1 cut(s)
|
1044 |
| HinP1I |
GCGC |
1 cut(s)
|
1044 |
| HincII |
GTYRAC |
2 cut(s)
|
39, 911 |
| HindII |
GTYRAC |
2 cut(s)
|
39, 911 |
| HinfI |
GANTC |
5 cut(s)
|
347, 771, 807, 1385, 1490 |
| HpaI |
GTTAAC |
1 cut(s)
|
39 |
| HpaII |
CCGG |
2 cut(s)
|
906, 1184 |
| HphI |
GGTGA |
2 cut(s)
|
684, 746 |
| Hpy166II |
GTNNAC |
5 cut(s)
|
39, 123, 528, 911, 1152 |
| Hpy188I |
TCNGA |
1 cut(s)
|
214 |
| Hpy188III |
TCNNGA |
7 cut(s)
|
344, 351, 367, 413, 1100, 1389, 1454 |
| Hpy8I |
GTNNAC |
5 cut(s)
|
39, 123, 528, 911, 1152 |
| HpyCH4III |
ACNGT |
3 cut(s)
|
210, 734, 749 |
| HpyCH4IV |
ACGT |
2 cut(s)
|
496, 913 |
| HpyCH4V |
TGCA |
6 cut(s)
|
132, 138, 890, 1049, 1178, 1205 |
| HpyF10VI |
GCNNNNNNNGC |
2 cut(s)
|
323, 1175 |
| HpyF3I |
CTNAG |
2 cut(s)
|
142, 616 |
| HpySE526I |
ACGT |
2 cut(s)
|
496, 913 |
| Hsp92II |
CATG |
4 cut(s)
|
439, 481, 1034, 1192 |
| HspAI |
GCGC |
1 cut(s)
|
1044 |
| KspAI |
GTTAAC |
1 cut(s)
|
39 |
| Kzo9I |
GATC |
5 cut(s)
|
193, 228, 398, 415, 991 |
| LmnI |
GCTCC |
2 cut(s)
|
788, 1007 |
| Lsp1109I |
GCAGC |
2 cut(s)
|
902, 1033 |
| LweI |
GCATC |
1 cut(s)
|
147 |
| MaeII |
ACGT |
2 cut(s)
|
496, 913 |
| MaeIII |
GTNAC |
5 cut(s)
|
337, 637, 717, 1326, 1478 |
| MalI |
GATC |
5 cut(s)
|
195, 230, 400, 417, 993 |
| MboI |
GATC |
5 cut(s)
|
193, 228, 398, 415, 991 |
| MboII |
GAAGA |
5 cut(s)
|
143, 227, 399, 410, 933 |
| MfeI |
CAATTG |
1 cut(s)
|
1287 |
| MflI |
RGATCY |
2 cut(s)
|
415, 991 |
| MhlI |
GDGCHC |
1 cut(s)
|
1467 |
| MnlI |
CCTC |
1 cut(s)
|
730 |
| Mph1103I |
ATGCAT |
1 cut(s)
|
134 |
| MroXI |
GAANNNNTTC |
2 cut(s)
|
150, 453 |
| MspA1I |
CMGCKG |
1 cut(s)
|
387 |
| MspI |
CCGG |
2 cut(s)
|
906, 1184 |
| MspR9I |
CCNGG |
3 cut(s)
|
906, 996, 1185 |
| MunI |
CAATTG |
1 cut(s)
|
1287 |
| MvaI |
CCWGG |
1 cut(s)
|
996 |
| MwoI |
GCNNNNNNNGC |
2 cut(s)
|
323, 1175 |
| NciI |
CCSGG |
2 cut(s)
|
906, 1185 |
| NdeI |
CATATG |
1 cut(s)
|
954 |
| NdeII |
GATC |
5 cut(s)
|
193, 228, 398, 415, 991 |
| NlaIII |
CATG |
4 cut(s)
|
439, 481, 1034, 1192 |
| NlaIV |
GGNNCC |
3 cut(s)
|
790, 993, 1393 |
| NmuCI |
GTSAC |
1 cut(s)
|
1478 |
| NsiI |
ATGCAT |
1 cut(s)
|
134 |
| NspV |
TTCGAA |
2 cut(s)
|
587, 805 |
| PacI |
TTAATTAA |
1 cut(s)
|
1359 |
| PcsI |
WCGNNNNNNNCGW |
1 cut(s)
|
349 |
| PdmI |
GAANNNNTTC |
2 cut(s)
|
150, 453 |
| PfeI |
GAWTC |
5 cut(s)
|
347, 771, 807, 1385, 1490 |
| PflFI |
GACNNNGTC |
1 cut(s)
|
1484 |
| PfoI |
TCCNGGA |
1 cut(s)
|
994 |
| PkrI |
GCNGC |
3 cut(s)
|
328, 892, 1048 |
| PshBI |
ATTAAT |
5 cut(s)
|
77, 200, 452, 554, 1359 |
| PsiI |
TTATAA |
3 cut(s)
|
177, 222, 965 |
| Psp6I |
CCWGG |
1 cut(s)
|
994 |
| PspEI |
GGTNACC |
1 cut(s)
|
717 |
| PspGI |
CCWGG |
1 cut(s)
|
994 |
| PspN4I |
GGNNCC |
3 cut(s)
|
790, 993, 1393 |
| PspPI |
GGNCC |
1 cut(s)
|
1391 |
| PstNI |
CAGNNNCTG |
1 cut(s)
|
753 |
| PsuI |
RGATCY |
2 cut(s)
|
415, 991 |
| PsyI |
GACNNNGTC |
1 cut(s)
|
1484 |
| RsaI |
GTAC |
4 cut(s)
|
383, 527, 751, 871 |
| RsaNI |
GTAC |
4 cut(s)
|
382, 526, 750, 870 |
| SatI |
GCNGC |
3 cut(s)
|
327, 891, 1047 |
| Sau3AI |
GATC |
5 cut(s)
|
193, 228, 398, 415, 991 |
| Sau96I |
GGNCC |
1 cut(s)
|
1391 |
| ScrFI |
CCNGG |
3 cut(s)
|
906, 996, 1185 |
| SduI |
GDGCHC |
1 cut(s)
|
1467 |
| SfaNI |
GCATC |
1 cut(s)
|
147 |
| SfcI |
CTRYAG |
1 cut(s)
|
276 |
| SfuI |
TTCGAA |
2 cut(s)
|
587, 805 |
| SinI |
GGWCC |
1 cut(s)
|
1391 |
| SsiI |
CCGC |
3 cut(s)
|
92, 326, 387 |
| SspI |
AATATT |
2 cut(s)
|
1140, 1247 |
| StyD4I |
CCNGG |
3 cut(s)
|
904, 994, 1183 |
| StyI |
CCWWGG |
2 cut(s)
|
32, 851 |
| TaaI |
ACNGT |
3 cut(s)
|
210, 734, 749 |
| TaiI |
ACGT |
2 cut(s)
|
499, 916 |
| TaqI |
TCGA |
5 cut(s)
|
231, 587, 805, 1163, 1488 |
| TatI |
WGTACW |
2 cut(s)
|
381, 525 |
| TauI |
GCSGC |
1 cut(s)
|
329 |
| TfiI |
GAWTC |
5 cut(s)
|
347, 771, 807, 1385, 1490 |
| TseFI |
GTSAC |
1 cut(s)
|
1478 |
| TseI |
GCWGC |
2 cut(s)
|
890, 1046 |
| Tsp45I |
GTSAC |
1 cut(s)
|
1478 |
| TspDTI |
ATGAA |
6 cut(s)
|
63, 350, 421, 1119, 1201, 1258 |
| TspGWI |
ACGGA |
1 cut(s)
|
1004 |
| Tth111I |
GACNNNGTC |
1 cut(s)
|
1484 |
| VpaK11BI |
GGWCC |
1 cut(s)
|
1391 |
| VspI |
ATTAAT |
5 cut(s)
|
77, 200, 452, 554, 1359 |
| XapI |
RAATTY |
4 cut(s)
|
515, 604, 1208, 1263 |
| XcmI |
CCANNNNNNNNNTGG |
1 cut(s)
|
1340 |
| XmiI |
GTMKAC |
1 cut(s)
|
122 |
| XmnI |
GAANNNNTTC |
2 cut(s)
|
150, 453 |
| Zsp2I |
ATGCAT |
1 cut(s)
|
134 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.