Basic Information
Type: gene
Biological Identity
arabidopsis_thaliana
Physical Location & Seq
Reverse (-)
144921 .. 145154
ATCG01270.1
Length: 234 bp
ATGCTACTACTGAAACATGGAAGAATTGAAATCTTAGATCAAAACACTATGTATGGATGGTATGAACTGCCTAAACAAGAATTCTTGAACAGCGAACAACCGGAGCTATTACTCACTACATCAAAAAAATTTCCATTAATAAAAGATGGAAATCCATTGGAAAATCAAAAATACGCATGTCGGATTAAATTGTTGTTGCTATCTGTTCCAATAACGAATCAACTGAATAACTAA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
7.86
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| Ycf15 |
PF10705 |
1 - 51 |
5.8e-22 |
Chloroplast protein precursor Ycf15 putative |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0019617)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AcsI |
RAATTY |
2 cut(s)
|
80, 128 |
| AgsI |
TTSAA |
2 cut(s)
|
29, 88 |
| AluBI |
AGCT |
1 cut(s)
|
106 |
| AluI |
AGCT |
1 cut(s)
|
106 |
| ApoI |
RAATTY |
2 cut(s)
|
80, 128 |
| AseI |
ATTAAT |
1 cut(s)
|
137 |
| BccI |
CCATC |
2 cut(s)
|
51, 140 |
| BsaBI |
GATNNNNATC |
1 cut(s)
|
150 |
| BsaWI |
WCCGGW |
1 cut(s)
|
100 |
| Bse8I |
GATNNNNATC |
1 cut(s)
|
150 |
| BseGI |
GGATG |
1 cut(s)
|
62 |
| BseJI |
GATNNNNATC |
1 cut(s)
|
150 |
| BsiSI |
CCGG |
1 cut(s)
|
101 |
| Bsp143I |
GATC |
1 cut(s)
|
37 |
| BssMI |
GATC |
1 cut(s)
|
37 |
| BstDEI |
CTNAG |
1 cut(s)
|
34 |
| BstF5I |
GGATG |
1 cut(s)
|
62 |
| BstKTI |
GATC |
1 cut(s)
|
40 |
| BstMBI |
GATC |
1 cut(s)
|
37 |
| BstNSI |
RCATGY |
1 cut(s)
|
180 |
| BtsCI |
GGATG |
1 cut(s)
|
62 |
| CviAII |
CATG |
2 cut(s)
|
17, 177 |
| CviJI |
RGCY |
1 cut(s)
|
106 |
| CviKI_1 |
RGCY |
1 cut(s)
|
106 |
| DdeI |
CTNAG |
1 cut(s)
|
34 |
| DpnI |
GATC |
1 cut(s)
|
39 |
| DpnII |
GATC |
1 cut(s)
|
37 |
| EcoRI |
GAATTC |
1 cut(s)
|
80 |
| FaeI |
CATG |
2 cut(s)
|
20, 180 |
| FaiI |
YATR |
5 cut(s)
|
18, 50, 54, 63, 178 |
| FatI |
CATG |
2 cut(s)
|
16, 176 |
| FokI |
GGATG |
1 cut(s)
|
69 |
| HapII |
CCGG |
1 cut(s)
|
101 |
| Hin1II |
CATG |
2 cut(s)
|
20, 180 |
| HinfI |
GANTC |
1 cut(s)
|
217 |
| HpaII |
CCGG |
1 cut(s)
|
101 |
| Hpy188I |
TCNGA |
1 cut(s)
|
183 |
| Hpy188III |
TCNNGA |
1 cut(s)
|
85 |
| HpyF3I |
CTNAG |
1 cut(s)
|
34 |
| Hsp92II |
CATG |
2 cut(s)
|
20, 180 |
| Kzo9I |
GATC |
1 cut(s)
|
37 |
| LmnI |
GCTCC |
1 cut(s)
|
103 |
| LpnPI |
CCDG |
1 cut(s)
|
114 |
| MalI |
GATC |
1 cut(s)
|
39 |
| MboI |
GATC |
1 cut(s)
|
37 |
| MboII |
GAAGA |
1 cut(s)
|
33 |
| MluCI |
AATT |
4 cut(s)
|
24, 80, 128, 188 |
| MmeI |
TCCRAC |
1 cut(s)
|
161 |
| MseI |
TTAA |
2 cut(s)
|
137, 186 |
| MspI |
CCGG |
1 cut(s)
|
101 |
| NdeII |
GATC |
1 cut(s)
|
37 |
| NlaIII |
CATG |
2 cut(s)
|
20, 180 |
| NspI |
RCATGY |
1 cut(s)
|
180 |
| PfeI |
GAWTC |
1 cut(s)
|
217 |
| PshBI |
ATTAAT |
1 cut(s)
|
137 |
| SaqAI |
TTAA |
2 cut(s)
|
137, 186 |
| Sau3AI |
GATC |
1 cut(s)
|
37 |
| SetI |
ASST |
1 cut(s)
|
108 |
| SgeI |
CNNG |
5 cut(s)
|
29, 89, 97, 113, 189 |
| Sse9I |
AATT |
4 cut(s)
|
24, 80, 128, 188 |
| TasI |
AATT |
4 cut(s)
|
24, 80, 128, 188 |
| TfiI |
GAWTC |
1 cut(s)
|
217 |
| Tru1I |
TTAA |
2 cut(s)
|
137, 186 |
| Tru9I |
TTAA |
2 cut(s)
|
137, 186 |
| TspDTI |
ATGAA |
1 cut(s)
|
78 |
| VspI |
ATTAAT |
1 cut(s)
|
137 |
| XapI |
RAATTY |
2 cut(s)
|
80, 128 |
| XceI |
RCATGY |
1 cut(s)
|
180 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.