Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0010098

Physical Location & Seq

Genomic Coordinates Reverse (-)

1444456 .. 1450271

Gene Structure 5816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g02580.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGGCCTCCTCCTCCGCCGCTCCCAACCGCGACGGCTCCTCCTCCTCCTCGCCTGAGGACGACGCCGTTTTGTCCGCCACCCGCGCTTTTGCTCAGGAGGCCTTGCTGCAATTCCAGTCCGGCAAGTTCGATCAGTGCCTCACGGCGTTGCAGGAGTGCCTCAAGCGGAAGTCCGGCGATCCCAAAATATTGCATAATATCGGACTTGCGGAATTCTATAGAGATGGTTGTTCAGATCCTAAGAGGTTGCTTGAAGTACTCAATGACGTCAAGAAGCGAAGTGAAGAGCTTGCTCGAGCATCTGCGGAACAAGCAGAGTCTGTAAGCAATAATGGAGATAAATTATCTTCAGGTTTTAAAGGAAGTAGTACAACGGCACATCCACTTTCTGCTGTCTACATGGATGAATTTGACACTTACGTAGCGACCTTAAACATTGCAATTATCTGGTTCCATCTCCATGAATATGCAAAGGCATTGTCTGTTGTTGAACCACTATTTCAAAATAGAGGACCCATAGATGAGAAAACTGCTCTCAATATTTGTCTTCTGTTGCTGGATGTGGGGCTAGCTTGCCATGATGCAAAGAAATCTGCTGATGTTTTATTATATCTGGAGAGAGCTTTTGGTGTGAGTTGTATGAATCAGGGAGACAATGGAAGCAGTGTGTCGCAGCAACCTCCAAACACAGTGGCCAAGTCTTCATTTCCTCCTAGTTCATCAGTCACAGATGCTCCTAATCTGGACTCAGACGCTAATACAAATGCATTGGATTCTGAGGAGACAGGCGAATTTGATAATGCGGTTTTCGACATGGATGTAGCACAGCCAACTGGTCTCTTATCGTCCAATGATGTTTCGAGGAACCCAGTTGACATATCTGTCTCTTCTGTTTATCTCAAGCTCAAGACACAACTTTACAAGGTTCGATTTCTACTTCTCACTCGGAACTTGAAGCAAGCTAAGAGAGAAGTGAAGCACGCTGTGAACATTGCACGTGGCAGAGACTTATCTATGGCTCTTCTCTTGAAGTCCCAGCTCGAATATGCTCGCGGTAATTACCGTAAAGCAATCAAGCTGTTAATGGCATCTAGCAACCGAACAGATACAAGGATCTCGAGCATGATCAACAATAATCTAGGATGCATCTATTATCAGCTTGGGAAATATCACACATCATCCGTATTCTTCTCCAACGCATTGCTTAATTGTTCATCTCTTCGGAAGGACAGGCCTGTAAATCTGTCAACTTGTTCACTGGATAACTCCCTCCTGATTGTATACAATTGTGGTATGCAGTACTTGGCTTGTGGAAAACCATTACTTGCTGCTCGCTGTTTCCAAAAAGCTGGTTTAATTTTCTACAATCGACCTCTGTTGTGGCTTCGGCTTGCTGAATGCTGTCTGATGGCTGTAGAGAAGGGACTAGTCAAAAACAGTCCGAGTGCATCAGAAGTCAGAGTTTATGTTATTGGCAAGGGAAAGTGGAGGCAACTTGTCATGCTGGATGGGGTTGAAAAGAATGGATCTGAAAAAGGTGATTTATTTTTGGGCAGTGATCAGCAGCCCAAGCTCTCAATGTCCCTTGCCCGGCACTGTCTCGCTAATGCCTTGTACTTACTGAACCATTCCGAATCAAGCTATTGTAAGAATTCTTTGCCATCTAATTTCTTCTTGGATGATAATGAGTTAGGCGAAGTGGCATCGTCCAAGACTTCCAACCACAAGAACTTGCACAACATCGATTCTGAGGCTTCTGTACTCTCTGTAGGCTTGGGTCAGGTTAGTGCAAATGGGGATGCAAAAGAGCAGAAGGCAGGAAGTACTCAGGAACTTGTGCAAAACTGCCTCTCTTCCTATGGAGAGATTCGTAAAAAGGAAAATCTGTTGCTCAAGCAAGCTCTTCTTGCTAATCAGGCATATGTGGAGTTGGAATTAGAGAATCCTCTGAAAGCCTTGTCAATTTCGAAGTCTCTCCTGGAAATTCCAGAATGTTCTAGAATTTACATATTTCTAGGTCATGTGTATGCGGCAGAGGCTCTTTGCTTGCTAAATAGGCCAAAGGATGCTGCTGAGCATTTGTTGACATATTTGTCTGGAGTTAATAATGTTGAATTGCCATTCACTGAAGATGACTTTGAACAATTGAAAGGGGTCAGGACTGTTGATTATGAAGAGGTGAATGGAGGGTCAGCGACTGCAAAGCCTTCGGCCTCAGAAGATGCATTAAGCTTTGCGTTCATCAAGCCAGAAGAGGCACTTGGAGCTCTGTACGTGAACTTTGCTGCCTTGTACGCCATGCAAGGTGAACTTGATCGGGCTCACCAGTTTGTTGCACAGGCATTGTCCATAGTACCGAACAATCCACAAGCATCTTTGACTGCAGTTTATGTGGACCTCAAGCTTGGTAAGTGTCAAGATGCTCTTTCCAAGTTAAAACGGTGTAGTCGAATTACATTCCTTCCTAGCGGATTAACATTGAATAAAGCTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

TPR_8

Protein Analysis

832

Amino Acids

90.87

Weight (kDa)

6.32

Isoelectric Point (pI)

40.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010098)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35430
fragaria_vesca	FvH4_1g02580 FvH4_1g02580
malus_domestica	MD02G1023300.v1.1 MD15G1166400.v1.1
prunus_persica	Prupe.7G248800_v2.0.a1 Prupe.7G248800_v2.0.a1 Prupe.7G248800_v2.0.a1
pyrus_communis	pycom02g02030 pycom15g14870
rosa_chinensis	RchiOBHm_Chr2g0087611
rosa_laevigata	RLG00000015886
rosa_multiflora	Rmu_sc0002299.1_g000034
rosa_roxburghii	Rroxscaffold_2G00153370
rosa_rugosa	Rorug01G0477000 Rorug01G0477100
rosa_samantha	Rh2AG030700 Rh2BG030400 Rh2CG030800 Rh2DG030700
rosa_wichuraiana	Rw2G002430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	881, 2092
AatII	GACGTC	1 cut(s)	270
AccBSI	CCGCTC	1 cut(s)	20
AccI	GTMKAC	2 cut(s)	396, 1281
AccII	CGCG	3 cut(s)	30, 84, 1053
AclWI	GGATC	4 cut(s)	173, 230, 1121, 1534
AcoI	YGGCCR	1 cut(s)	693
AcsI	RAATTY	6 cut(s)	212, 407, 791, 1651, 1983, 2001
AcuI	CTGAAG	2 cut(s)	333, 2148
AcvI	CACGTG	1 cut(s)	998
AcyI	GRCGYC	2 cut(s)	63, 267
AdeI	CACNNNGTG	1 cut(s)	985
AfaI	GTAC	9 cut(s)	258, 370, 1301, 1616, 1761, 1825, 2273, 2294, 2355
AfiI	CCNNNNNNNGG	1 cut(s)	1590
AhlI	ACTAGT	1 cut(s)	1426
AjnI	CCWGG	1 cut(s)	1977
AjuI	GAANNNNNNNTTGG	2 cut(s)	2244, 2276
Alw21I	GWGCWC	1 cut(s)	2269
Alw26I	GTCTC	7 cut(s)	645, 776, 842, 889, 999, 1604, 1977
AlwI	GGATC	4 cut(s)	173, 230, 1121, 1534
AlwNI	CAGNNNCTG	2 cut(s)	320, 2198
Ama87I	CYCGRG	2 cut(s)	294, 1117
AoxI	GGCC	6 cut(s)	3, 99, 693, 1232, 2057, 2211
ApeKI	GCWGC	6 cut(s)	106, 673, 1328, 1564, 2069, 2285
ApoI	RAATTY	6 cut(s)	212, 407, 791, 1651, 1983, 2001
ArsI	GACNNNNNNTTYG	2 cut(s)	464, 496
AspLEI	GCGC	1 cut(s)	86
AspS9I	GGNCC	2 cut(s)	512, 2395
AsuC2I	CCSGG	1 cut(s)	1591
AsuHPI	GGTGA	4 cut(s)	1550, 2191, 2315, 2318
AsuII	TTCGAA	1 cut(s)	1967
AsuNHI	GCTAGC	1 cut(s)	568
AvaI	CYCGRG	2 cut(s)	294, 1117
AvaII	GGWCC	2 cut(s)	512, 2395
AxyI	CCTNAGG	1 cut(s)	54
BalI	TGGCCA	1 cut(s)	695
BanII	GRGCYC	2 cut(s)	2269, 2323
BbrPI	CACGTG	1 cut(s)	998
BbsI	GAAGAC	2 cut(s)	539, 693
Bbv12I	GWGCWC	1 cut(s)	2269
BbvI	GCAGC	6 cut(s)	93, 685, 1315, 1576, 2056, 2272
BccI	CCATC	5 cut(s)	218, 462, 1402, 1502, 1669
BceAI	ACGGC	4 cut(s)	49, 50, 159, 390
BcgI	CGANNNNNNTGC	2 cut(s)	2190, 2224
BciT130I	CCWGG	1 cut(s)	1979
BclI	TGATCA	2 cut(s)	1125, 1558
BcnI	CCSGG	1 cut(s)	1591
BcoDI	GTCTC	7 cut(s)	645, 776, 842, 889, 999, 1604, 1977
BcuI	ACTAGT	1 cut(s)	1426
BfaI	CTAG	8 cut(s)	569, 714, 1092, 1139, 1427, 1998, 2015, 2466
BfmI	CTRYAG	4 cut(s)	217, 1413, 1767, 2382
BisI	GCNGC	8 cut(s)	18, 107, 674, 1329, 1565, 2031, 2070, 2286
BlpI	GCTNAGC	1 cut(s)	2073
BlsI	GCNGC	8 cut(s)	19, 108, 675, 1330, 1566, 2032, 2071, 2287
BmcAI	AGTACT	3 cut(s)	258, 1301, 1825
Bme1390I	CCNGG	2 cut(s)	1591, 1979
Bme18I	GGWCC	2 cut(s)	512, 2395
BmeT110I	CYCGRG	2 cut(s)	294, 1117
BmgT120I	GGNCC	2 cut(s)	512, 2395
BmiI	GGNNCC	4 cut(s)	37, 452, 514, 866
BmrFI	CCNGG	2 cut(s)	1591, 1979
BmrI	ACTGGG	1 cut(s)	863
BmtI	GCTAGC	1 cut(s)	572
BmuI	ACTGGG	1 cut(s)	863
BpiI	GAAGAC	2 cut(s)	539, 693
BpmI	CTGGAG	2 cut(s)	635, 2118
Bpu10I	CCTNAGC	1 cut(s)	93
Bpu1102I	GCTNAGC	1 cut(s)	2073
Bpu14I	TTCGAA	1 cut(s)	1967
BpuEI	CTTGAG	5 cut(s)	146, 884, 890, 1877, 2384
BpuMI	CCSGG	1 cut(s)	1591
Bsa29I	ATCGAT	1 cut(s)	1743
BsaAI	YACGTR	3 cut(s)	421, 998, 2275
BsaHI	GRCGYC	2 cut(s)	63, 267
BsaI	GGTCTC	1 cut(s)	842
BsaXI	ACNNNNNCTCC	4 cut(s)	23, 53, 718, 748
Bsc4I	CCNNNNNNNGG	1 cut(s)	1590
Bse1I	ACTGG	5 cut(s)	115, 838, 869, 1263, 2326
Bse21I	CCTNAGG	1 cut(s)	54
Bse3DI	GCAATG	3 cut(s)	435, 990, 1199
BseBI	CCWGG	1 cut(s)	1979
BseCI	ATCGAT	1 cut(s)	1743
BseLI	CCNNNNNNNGG	1 cut(s)	1590
BseMI	GCAATG	3 cut(s)	435, 990, 1199
BseMII	CTCAG	8 cut(s)	45, 107, 762, 768, 1740, 1841, 2064, 2229
BseNI	ACTGG	5 cut(s)	115, 838, 869, 1263, 2326
BseRI	GAGGAG	5 cut(s)	28, 31, 34, 37, 794
BseXI	GCAGC	6 cut(s)	93, 685, 1315, 1576, 2056, 2272
BseYI	CCCAGC	1 cut(s)	1035
Bsh1236I	CGCG	3 cut(s)	30, 84, 1053
BshFI	GGCC	6 cut(s)	5, 101, 695, 1234, 2059, 2213
BshVI	ATCGAT	1 cut(s)	1743
BsiHKAI	GWGCWC	1 cut(s)	2269
BsiHKCI	CYCGRG	2 cut(s)	294, 1117
BsiSI	CCGG	3 cut(s)	120, 174, 1591
BslFI	GGGAC	3 cut(s)	1018, 1437, 1567
BslI	CCNNNNNNNGG	1 cut(s)	1590
BsmAI	GTCTC	7 cut(s)	645, 776, 842, 889, 999, 1604, 1977
BsmFI	GGGAC	3 cut(s)	1018, 1437, 1567
BsmI	GAATGC	1 cut(s)	1403
BsnI	GGCC	6 cut(s)	5, 101, 695, 1234, 2059, 2213
Bso31I	GGTCTC	1 cut(s)	842
BsoBI	CYCGRG	2 cut(s)	294, 1117
Bsp119I	TTCGAA	1 cut(s)	1967
Bsp1286I	GDGCHC	2 cut(s)	2269, 2323
Bsp143I	GATC	8 cut(s)	130, 178, 235, 1113, 1125, 1526, 1558, 2314
Bsp1720I	GCTNAGC	1 cut(s)	2073
BspANI	GGCC	6 cut(s)	5, 101, 695, 1234, 2059, 2213
BspCNI	CTCAG	8 cut(s)	46, 106, 761, 769, 1741, 1840, 2065, 2228
BspDI	ATCGAT	1 cut(s)	1743
BspFNI	CGCG	3 cut(s)	30, 84, 1053
BspLI	GGNNCC	4 cut(s)	37, 452, 514, 866
BspMAI	CTGCAG	1 cut(s)	2386
BspOI	GCTAGC	1 cut(s)	572
BspPI	GGATC	4 cut(s)	173, 230, 1121, 1534
BspQI	GCTCTTC	3 cut(s)	279, 1026, 1908
BspT104I	TTCGAA	1 cut(s)	1967
BspTNI	GGTCTC	1 cut(s)	842
BsrBI	CCGCTC	1 cut(s)	20
BsrDI	GCAATG	3 cut(s)	435, 990, 1199
BsrI	ACTGG	5 cut(s)	115, 838, 869, 1263, 2326
BssMI	GATC	8 cut(s)	130, 178, 235, 1113, 1125, 1526, 1558, 2314
BssNAI	GTATAC	1 cut(s)	1282
BssNI	GRCGYC	2 cut(s)	63, 267
Bst1107I	GTATAC	1 cut(s)	1282
Bst2UI	CCWGG	1 cut(s)	1979
Bst4CI	ACNGT	6 cut(s)	691, 1064, 1439, 1598, 2164, 2442
Bst6I	CTCTTC	8 cut(s)	279, 892, 1026, 1224, 1858, 1908, 2169, 2247
BstACI	GRCGYC	2 cut(s)	63, 267
BstBAI	YACGTR	3 cut(s)	421, 998, 2275
BstBI	TTCGAA	1 cut(s)	1967
BstFNI	CGCG	3 cut(s)	30, 84, 1053
BstHHI	GCGC	1 cut(s)	86
BstKTI	GATC	8 cut(s)	133, 181, 238, 1116, 1128, 1529, 1561, 2317
BstMAI	GTCTC	7 cut(s)	645, 776, 842, 889, 999, 1604, 1977
BstMBI	GATC	8 cut(s)	130, 178, 235, 1113, 1125, 1526, 1558, 2314
BstNI	CCWGG	1 cut(s)	1979
BstSCI	CCNGG	2 cut(s)	1589, 1977
BstSFI	CTRYAG	4 cut(s)	217, 1413, 1767, 2382
BstSNI	TACGTA	1 cut(s)	421
BstUI	CGCG	3 cut(s)	30, 84, 1053
BstV1I	GCAGC	6 cut(s)	93, 685, 1315, 1576, 2056, 2272
BstV2I	GAAGAC	2 cut(s)	539, 693
BstX2I	RGATCY	3 cut(s)	235, 1113, 1526
BstXI	CCANNNNNNTGG	1 cut(s)	1349
BstYI	RGATCY	3 cut(s)	235, 1113, 1526
BstZ17I	GTATAC	1 cut(s)	1282
Bsu15I	ATCGAT	1 cut(s)	1743
Bsu36I	CCTNAGG	1 cut(s)	54
BsuRI	GGCC	6 cut(s)	5, 101, 695, 1234, 2059, 2213
BsuTUI	ATCGAT	1 cut(s)	1743
BtsI	GCAGTG	2 cut(s)	670, 1561
BtsIMutI	CAGTG	7 cut(s)	140, 670, 696, 1256, 1561, 1594, 2124
CaiI	CAGNNNCTG	2 cut(s)	320, 2198
CfoI	GCGC	1 cut(s)	86
Cfr13I	GGNCC	2 cut(s)	512, 2395
ClaI	ATCGAT	1 cut(s)	1743
CseI	GACGC	2 cut(s)	71, 761
Csp6I	GTAC	9 cut(s)	257, 369, 1300, 1615, 1760, 1824, 2272, 2293, 2354
CspCI	CAANNNNNGTGG	2 cut(s)	672, 707
CviAII	CATG	8 cut(s)	400, 461, 578, 814, 1123, 1501, 2021, 2299
CviQI	GTAC	9 cut(s)	257, 369, 1300, 1615, 1760, 1824, 2272, 2293, 2354
DpnI	GATC	8 cut(s)	132, 180, 237, 1115, 1127, 1528, 1560, 2316
DpnII	GATC	8 cut(s)	130, 178, 235, 1113, 1125, 1526, 1558, 2314
DraI	TTTAAA	1 cut(s)	358
DraIII	CACNNNGTG	1 cut(s)	985
DrdI	GACNNNNNNGTC	2 cut(s)	881, 2092
DseDI	GACNNNNNNGTC	2 cut(s)	881, 2092
EaeI	YGGCCR	1 cut(s)	693
Eam1104I	CTCTTC	8 cut(s)	279, 892, 1026, 1224, 1858, 1908, 2169, 2247
EarI	CTCTTC	8 cut(s)	279, 892, 1026, 1224, 1858, 1908, 2169, 2247
EciI	GGCGGA	2 cut(s)	4, 64
Ecl136II	GAGCTC	1 cut(s)	2267
Eco105I	TACGTA	1 cut(s)	421
Eco147I	AGGCCT	2 cut(s)	101, 1234
Eco24I	GRGCYC	2 cut(s)	2269, 2323
Eco31I	GGTCTC	1 cut(s)	842
Eco47I	GGWCC	2 cut(s)	512, 2395
Eco53kI	GAGCTC	1 cut(s)	2267
Eco57I	CTGAAG	2 cut(s)	333, 2148
Eco72I	CACGTG	1 cut(s)	998
Eco81I	CCTNAGG	1 cut(s)	54
Eco88I	CYCGRG	2 cut(s)	294, 1117
EcoICRI	GAGCTC	1 cut(s)	2267
EcoO109I	RGGNCCY	1 cut(s)	512
EcoRI	GAATTC	2 cut(s)	212, 1651
EcoRII	CCWGG	1 cut(s)	1977
EcoT22I	ATGCAT	3 cut(s)	769, 1148, 2227
EcoT38I	GRGCYC	2 cut(s)	2269, 2323
FaeI	CATG	8 cut(s)	403, 464, 581, 817, 1126, 1504, 2024, 2302
FalI	AAGNNNNNCTT	8 cut(s)	1890, 1922, 2244, 2276, 2295, 2327, 2409, 2441
FaqI	GGGAC	3 cut(s)	1018, 1437, 1567
FatI	CATG	8 cut(s)	399, 460, 577, 813, 1122, 1500, 2020, 2298
FauI	CCCGC	1 cut(s)	89
FauNDI	CATATG	1 cut(s)	1921
FbaI	TGATCA	2 cut(s)	1125, 1558
FblI	GTMKAC	2 cut(s)	396, 1281
Fnu4HI	GCNGC	8 cut(s)	18, 107, 674, 1329, 1565, 2031, 2070, 2286
FriOI	GRGCYC	2 cut(s)	2269, 2323
Fsp4HI	GCNGC	8 cut(s)	18, 107, 674, 1329, 1565, 2031, 2070, 2286
FspBI	CTAG	8 cut(s)	569, 714, 1092, 1139, 1427, 1998, 2015, 2466
GlaI	GCGC	1 cut(s)	85
GluI	GCNGC	8 cut(s)	18, 107, 674, 1329, 1565, 2031, 2070, 2286
GsaI	CCCAGC	1 cut(s)	1039
GsuI	CTGGAG	2 cut(s)	635, 2118
HaeIII	GGCC	6 cut(s)	5, 101, 695, 1234, 2059, 2213
HapII	CCGG	3 cut(s)	120, 174, 1591
HgaI	GACGC	2 cut(s)	71, 761
HhaI	GCGC	1 cut(s)	86
Hin1I	GRCGYC	2 cut(s)	63, 267
Hin1II	CATG	8 cut(s)	403, 464, 581, 817, 1126, 1504, 2024, 2302
Hin6I	GCGC	1 cut(s)	84
HinP1I	GCGC	1 cut(s)	84
HincII	GTYRAC	3 cut(s)	874, 1248, 2085
HindII	GTYRAC	3 cut(s)	874, 1248, 2085
HindIII	AAGCTT	3 cut(s)	2230, 2402, 2487
HinfI	GANTC	8 cut(s)	317, 643, 746, 773, 1634, 1745, 1867, 1942
HpaII	CCGG	3 cut(s)	120, 174, 1591
HphI	GGTGA	4 cut(s)	1550, 2191, 2315, 2318
Hpy99I	CGWCG	2 cut(s)	35, 65
HpyAV	CCTTC	5 cut(s)	1219, 1414, 1807, 2217, 2471
HpyCH4III	ACNGT	6 cut(s)	691, 1064, 1439, 1598, 2164, 2442
HpyCH4IV	ACGT	4 cut(s)	267, 420, 997, 2274
HpySE526I	ACGT	4 cut(s)	267, 420, 997, 2274
Hsp92I	GRCGYC	2 cut(s)	63, 267
Hsp92II	CATG	8 cut(s)	403, 464, 581, 817, 1126, 1504, 2024, 2302
HspAI	GCGC	1 cut(s)	84
Ksp22I	TGATCA	2 cut(s)	1125, 1558
Kzo9I	GATC	8 cut(s)	130, 178, 235, 1113, 1125, 1526, 1558, 2314
LguI	GCTCTTC	3 cut(s)	279, 1026, 1908
LmnI	GCTCC	4 cut(s)	25, 41, 739, 2264
Lsp1109I	GCAGC	6 cut(s)	93, 685, 1315, 1576, 2056, 2272
MaeI	CTAG	8 cut(s)	569, 714, 1092, 1139, 1427, 1998, 2015, 2466
MaeII	ACGT	4 cut(s)	267, 420, 997, 2274
MaeIII	GTNAC	1 cut(s)	724
MalI	GATC	8 cut(s)	132, 180, 237, 1115, 1127, 1528, 1560, 2316
MbiI	CCGCTC	1 cut(s)	20
MboI	GATC	8 cut(s)	130, 178, 235, 1113, 1125, 1526, 1558, 2314
MfeI	CAATTG	2 cut(s)	1285, 2144
MflI	RGATCY	3 cut(s)	235, 1113, 1526
MhlI	GDGCHC	2 cut(s)	2269, 2323
MlsI	TGGCCA	1 cut(s)	695
MluNI	TGGCCA	1 cut(s)	695
MlyI	GAGTC	2 cut(s)	326, 740
MmeI	TCCRAC	3 cut(s)	1218, 1743, 1911
Mox20I	TGGCCA	1 cut(s)	695
Mph1103I	ATGCAT	3 cut(s)	769, 1148, 2227
MscI	TGGCCA	1 cut(s)	695
MseI	TTAA	9 cut(s)	357, 431, 1082, 1206, 1355, 2103, 2228, 2435, 2474
MslI	CAYNNNNRTG	3 cut(s)	459, 465, 2025
Msp20I	TGGCCA	1 cut(s)	695
MspI	CCGG	3 cut(s)	120, 174, 1591
MspR9I	CCNGG	2 cut(s)	1591, 1979
MunI	CAATTG	2 cut(s)	1285, 2144
Mva1269I	GAATGC	1 cut(s)	1403
MvaI	CCWGG	1 cut(s)	1979
MvnI	CGCG	3 cut(s)	30, 84, 1053
NciI	CCSGG	1 cut(s)	1591
NdeI	CATATG	1 cut(s)	1921
NdeII	GATC	8 cut(s)	130, 178, 235, 1113, 1125, 1526, 1558, 2314
NheI	GCTAGC	1 cut(s)	568
NlaIII	CATG	8 cut(s)	403, 464, 581, 817, 1126, 1504, 2024, 2302
NlaIV	GGNNCC	4 cut(s)	37, 452, 514, 866
NmuCI	GTSAC	1 cut(s)	724
NsiI	ATGCAT	3 cut(s)	769, 1148, 2227
NspV	TTCGAA	1 cut(s)	1967
PaeR7I	CTCGAG	2 cut(s)	294, 1117
PceI	AGGCCT	2 cut(s)	101, 1234
PciSI	GCTCTTC	3 cut(s)	279, 1026, 1908
PcsI	WCGNNNNNNNCGW	1 cut(s)	2446
PctI	GAATGC	1 cut(s)	1403
PfeI	GAWTC	6 cut(s)	643, 773, 1634, 1745, 1867, 1942
PfoI	TCCNGGA	1 cut(s)	1977
PkrI	GCNGC	8 cut(s)	19, 108, 675, 1330, 1566, 2032, 2071, 2287
PleI	GAGTC	2 cut(s)	325, 740
PmaCI	CACGTG	1 cut(s)	998
PmlI	CACGTG	1 cut(s)	998
PpsI	GAGTC	2 cut(s)	325, 740
Ppu21I	YACGTR	3 cut(s)	421, 998, 2275
PpuMI	RGGWCCY	1 cut(s)	512
Psp124BI	GAGCTC	1 cut(s)	2269
Psp5II	RGGWCCY	1 cut(s)	512
Psp6I	CCWGG	1 cut(s)	1977
PspCI	CACGTG	1 cut(s)	998
PspFI	CCCAGC	1 cut(s)	1035
PspGI	CCWGG	1 cut(s)	1977
PspN4I	GGNNCC	4 cut(s)	37, 452, 514, 866
PspPI	GGNCC	2 cut(s)	512, 2395
PspPPI	RGGWCCY	1 cut(s)	512
PspXI	VCTCGAGB	1 cut(s)	294
PstI	CTGCAG	1 cut(s)	2386
PstNI	CAGNNNCTG	2 cut(s)	320, 2198
PsuI	RGATCY	3 cut(s)	235, 1113, 1526
RsaI	GTAC	9 cut(s)	258, 370, 1301, 1616, 1761, 1825, 2273, 2294, 2355
RsaNI	GTAC	9 cut(s)	257, 369, 1300, 1615, 1760, 1824, 2272, 2293, 2354
RseI	CAYNNNNRTG	3 cut(s)	459, 465, 2025
SacI	GAGCTC	1 cut(s)	2269
SapI	GCTCTTC	3 cut(s)	279, 1026, 1908
SaqAI	TTAA	9 cut(s)	357, 431, 1082, 1206, 1355, 2103, 2228, 2435, 2474
SatI	GCNGC	8 cut(s)	18, 107, 674, 1329, 1565, 2031, 2070, 2286
Sau3AI	GATC	8 cut(s)	130, 178, 235, 1113, 1125, 1526, 1558, 2314
Sau96I	GGNCC	2 cut(s)	512, 2395
ScaI	AGTACT	3 cut(s)	258, 1301, 1825
SchI	GAGTC	2 cut(s)	326, 740
ScrFI	CCNGG	2 cut(s)	1591, 1979
SduI	GDGCHC	2 cut(s)	2269, 2323
SfcI	CTRYAG	4 cut(s)	217, 1413, 1767, 2382
Sfr274I	CTCGAG	2 cut(s)	294, 1117
SfuI	TTCGAA	1 cut(s)	1967
SinI	GGWCC	2 cut(s)	512, 2395
SlaI	CTCGAG	2 cut(s)	294, 1117
SmiMI	CAYNNNNRTG	3 cut(s)	459, 465, 2025
SmlI	CTYRAG	7 cut(s)	161, 294, 899, 905, 1117, 1892, 2399
SmoI	CTYRAG	7 cut(s)	161, 294, 899, 905, 1117, 1892, 2399
SnaBI	TACGTA	1 cut(s)	421
SpeI	ACTAGT	1 cut(s)	1426
SseBI	AGGCCT	2 cut(s)	101, 1234
SspI	AATATT	2 cut(s)	189, 541
SspMI	CTAG	8 cut(s)	569, 714, 1092, 1139, 1427, 1998, 2015, 2466
SstI	GAGCTC	1 cut(s)	2269
StuI	AGGCCT	2 cut(s)	101, 1234
StyD4I	CCNGG	2 cut(s)	1589, 1977
TaaI	ACNGT	6 cut(s)	691, 1064, 1439, 1598, 2164, 2442
TaiI	ACGT	4 cut(s)	270, 423, 1000, 2277
TatI	WGTACW	6 cut(s)	256, 368, 1299, 1614, 1759, 1823
TauI	GCSGC	2 cut(s)	20, 2033
TfiI	GAWTC	6 cut(s)	643, 773, 1634, 1745, 1867, 1942
Tru1I	TTAA	9 cut(s)	357, 431, 1082, 1206, 1355, 2103, 2228, 2435, 2474
Tru9I	TTAA	9 cut(s)	357, 431, 1082, 1206, 1355, 2103, 2228, 2435, 2474
TscAI	CASTG	7 cut(s)	140, 670, 696, 1263, 1561, 1601, 2131
TseFI	GTSAC	1 cut(s)	724
TseI	GCWGC	6 cut(s)	106, 673, 1328, 1564, 2069, 2285
Tsp45I	GTSAC	1 cut(s)	724
TspDTI	ATGAA	8 cut(s)	420, 477, 656, 693, 708, 1203, 2187, 2230
TspGWI	ACGGA	1 cut(s)	1171
TspRI	CASTG	7 cut(s)	140, 670, 696, 1263, 1561, 1601, 2131
VpaK11BI	GGWCC	2 cut(s)	512, 2395
XapI	RAATTY	6 cut(s)	212, 407, 791, 1651, 1983, 2001
XbaI	TCTAGA	1 cut(s)	1997
XhoI	CTCGAG	2 cut(s)	294, 1117
XmiI	GTMKAC	2 cut(s)	396, 1281
XspI	CTAG	8 cut(s)	569, 714, 1092, 1139, 1427, 1998, 2015, 2466
ZraI	GACGTC	1 cut(s)	268
ZrmI	AGTACT	3 cut(s)	258, 1301, 1825
Zsp2I	ATGCAT	3 cut(s)	769, 1148, 2227

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.