Rh2DG030700

CCR4-NOT transcription complex subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
1888765 .. 1894675
5911 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG030700.1

Sequence Viewer

Length: 2304 bp
ATGCAAGACCTGTTACTTTTCAATGTGATAAATTTTTTTCTTTATTTCAACTTTTTATTATTATTGGTATTGGTTCAGAAGCAAAGTGAAGAGCTTGCTCGAGCATCCGCAGAACAAGCGGAGTCTGCAAGCAATAGTGGAGATAAATCATCTTCGGGTTCCAAAGCAAGTAGTACAATGGCACATCCATTTTCTGCTCTCTACATGGATGAATTTGACACTTATGTAGCAACCTTAAACATTGCGATTATCTGGTTCCATCTTCATGAATATGCAAAGGCGTTGTCTGTTGTTGAACCACTGTTTCAAAATAGAGGACCTATAGATGAGAAAACTGCTCTTAATATTTGCCTTCTGTTGCTGGATGTGGGGCTAGCTTGCCATGATGCAAAGAAATCTGCTGATGTTTTAATATATCTGGAGAGAGCTTTTGGTGTTAGTTGTATGAATCAGGGAGACAATGGAAGCACTGTGTCGCAACAACCTCCAAACACAGTTGCTAAGTCTTCATTTCCTCCTAGTTCATCAGTCACTGATGCTCCTAATTTGGACTCAGATGGTAATACAAATGCCTTGGATTCTGAGGAGACAGGCGAGTTTGATAATGTGGTTTTCGACATGGATGTAGCACAGCCAACCGGTCTCTTATCTTCCAATGATCTTTCGAGGAACCCAGTTGACATATCTGTCTCTTCTGTTTATCTCAAGCTCAAGACGCAACTTTACAAGGTTCGATTTCTACTTCTCACTCGGAACTTAAAGCAAGCTAAGCGAGAAGTGAAGCATGCTGTGAACATCGCACGTGGCAGAGACTTATCCATGGCTCTTCTCTTGAAGTCCCAGCTTGAATATGCTCGTGGTAATTATCGTAAAGCAATCAAGCTGTTGATGGCATCTAGCAACCGAACAGATACAAGGATCTCAAGCATGATCAACAATAATCTAGGATGCATCTATTATCAGCTCGGGAAATATCACACATCATCCGTATTCTTCTCCAATGCATTGCTTAATTGTTCATCTCTTCGGAAGGACAGGCCCCTGAATCTGTCAACTTTTTCCCTGGATAATTCCCTCCTGATAGTATACAACTGTGGTATGCAGTACTTGGCTTGTGGAAAACCATTACTTGCTGCTCGCTGTTTCCAAAAGGCTGGTTTAATTTTCTACAATCGACCTCTGTTGTGGCTTCGGCTTGCTGAATGCTGTCTGATGGCTTTAGAGAAGGGACTAGTCAAAAAGAGTCCAGCTGCATCAGAAGTCAGAGTTTATGTTATTGGCAAGGGTAAGTGGAGGCAACTTGTCATGCAGGATGGGGTTGTCAAGAATGGGAGCTCTGAAAAAGGTGATTTATTTTTGGGTAGTGATCAGCAGCCCAAGCTCTCAATGTCCCTTGCCCGGCAGTGTCTCTCTAATGCCTTGTACTTACTAAACCATTCCGAATCAAGCTATTGTAAGAATTCTTTGCCATCTAATTTCTTCTTGGACGATAATGAGTTGGGTGAAGTGGCATCGTCCAAGAATTCCAACCACAAGAACTTGCACAACATTGATTCCGAGGCTTCTGTGCTGTCTGTAGGCTTGGGTCAGGTTAGTGCAAATGGGGATGCAAAAGAGCAGAAGGGAGGAACTACTCAGGAGCTTGTGCAAAACTCCCTTTCCTCCTATGAAGAGATTCGTAAAAAGGAAAATCTGTTGCTCAAGCAAGCTCTTCTTGCTAATCAGGCATATGTGGAGTTGGAATTGGAAAATCCTCTGAAAGCCTTGTCAATTTCGAAGTCTCTCTTGGAAATTCCGGAATGTTCTAGAATTTACATATTTCTAGGTCATGTGTATGCGGCAGAGGCTCTTTGCTTGCTAAACAGGCCAAAGGATGCTTCTGAGCATTTGTTGACATATTTGTCTGGAGCTAATAATGTTGAATTGCCATTCACGGAAGAGGACTTTGAGCAATTGAAAGGGGTCAGGACTGTTGATTATGAAGAGGTGAATGGAGGGTCAGCGACTGCAAAACCTTCGGCCTCAGAGGACGGGTTAAGCTTTGTGTTCATCAAGCCAGAAGAGGCACTTGGAGCGATGTACGTAAATTTTGCTGCCTTGTTCGCCATGCAGGGTGAACTTGATCGGGCCCACCAGTTTGTTGCACAGGCATTGTCCATAGTACCCAACAATCTACAAGCATCTTTGACTGCAGTTTATGTGGACCTCAAGCTTGGTAAGTCTCAAGAAGCCCTTGCCAAGTTGAAACGGTGTAGTCGAATTACATTCCTTCCAAGCGGATTAACATTGAATAAAGCTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

767

Amino Acids

84.4

Weight (kDa)

6.36

Isoelectric Point (pI)

37.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 686, 1900
AccI GTMKAC 1 cut(s) 1086
AccIII TCCGGA 1 cut(s) 1795
AciI CCGC 4 cut(s) 108, 119, 1838, 2277
AclWI GGATC 1 cut(s) 926
AcsI RAATTY 7 cut(s) 31, 212, 1459, 1522, 1791, 1809, 2086
AcvI CACGTG 1 cut(s) 803
AfaI GTAC 5 cut(s) 175, 1106, 1424, 2081, 2163
AfiI CCNNNNNNNGG 1 cut(s) 1398
AgeI ACCGGT 1 cut(s) 638
AhlI ACTAGT 1 cut(s) 1231
AjnI CCWGG 1 cut(s) 1062
AjuI GAANNNNNNNTTGG 6 cut(s) 1769, 1801, 1861, 1893, 2052, 2084
Alw21I GWGCWC 1 cut(s) 1337
Alw26I GTCTC 8 cut(s) 450, 581, 647, 694, 804, 1412, 1785, 2226
AlwI GGATC 1 cut(s) 926
AlwNI CAGNNNCTG 2 cut(s) 533, 2006
Ama87I CYCGRG 2 cut(s) 99, 965
Aor13HI TCCGGA 1 cut(s) 1795
AoxI GGCC 4 cut(s) 1037, 1865, 2019, 2127
ApaI GGGCCC 1 cut(s) 2131
ApeKI GCWGC 4 cut(s) 1133, 1250, 1372, 2093
ApoI RAATTY 7 cut(s) 31, 212, 1459, 1522, 1791, 1809, 2086
ArsI GACNNNNNNTTYG 2 cut(s) 269, 301
AsiGI ACCGGT 1 cut(s) 638
Asp700I GAANNNNTTC 1 cut(s) 1674
AspS9I GGNCC 5 cut(s) 317, 1038, 2127, 2128, 2203
AsuC2I CCSGG 1 cut(s) 1399
AsuHPI GGTGA 4 cut(s) 1358, 1514, 1999, 2126
AsuII TTCGAA 1 cut(s) 1775
AsuNHI GCTAGC 1 cut(s) 373
AvaI CYCGRG 2 cut(s) 99, 965
AvaII GGWCC 2 cut(s) 317, 2203
BaeGI GKGCMC 1 cut(s) 2131
BanII GRGCYC 2 cut(s) 1337, 2131
BauI CACGAG 1 cut(s) 855
BbrPI CACGTG 1 cut(s) 803
BbsI GAAGAC 1 cut(s) 498
Bbv12I GWGCWC 1 cut(s) 1337
BbvI GCAGC 4 cut(s) 1120, 1237, 1384, 2080
BccI CCATC 6 cut(s) 267, 551, 883, 1207, 1307, 1477
BcgI CGANNNNNNTGC 2 cut(s) 1998, 2032
BciT130I CCWGG 1 cut(s) 1064
BclI TGATCA 2 cut(s) 930, 1366
BcnI CCSGG 1 cut(s) 1399
BcoDI GTCTC 8 cut(s) 450, 581, 647, 694, 804, 1412, 1785, 2226
BcuI ACTAGT 1 cut(s) 1231
BfaI CTAG 7 cut(s) 374, 519, 897, 944, 1232, 1806, 1823
BfmI CTRYAG 3 cut(s) 321, 1575, 2190
BisI GCNGC 5 cut(s) 1134, 1251, 1373, 1839, 2094
BlpI GCTNAGC 1 cut(s) 768
BlsI GCNGC 5 cut(s) 1135, 1252, 1374, 1840, 2095
BmcAI AGTACT 1 cut(s) 1106
Bme1390I CCNGG 2 cut(s) 1064, 1399
Bme18I GGWCC 2 cut(s) 317, 2203
BmeT110I CYCGRG 2 cut(s) 99, 965
BmgT120I GGNCC 5 cut(s) 317, 1038, 2127, 2128, 2203
BmiI GGNNCC 5 cut(s) 160, 257, 671, 1040, 2129
BmrFI CCNGG 2 cut(s) 1064, 1399
BmrI ACTGGG 1 cut(s) 668
BmtI GCTAGC 1 cut(s) 377
BmuI ACTGGG 1 cut(s) 668
BpiI GAAGAC 1 cut(s) 498
BpmI CTGGAG 2 cut(s) 440, 1926
Bpu1102I GCTNAGC 1 cut(s) 768
Bpu14I TTCGAA 1 cut(s) 1775
BpuEI CTTGAG 6 cut(s) 689, 695, 907, 1685, 2192, 2208
BpuMI CCSGG 1 cut(s) 1399
BsaAI YACGTR 2 cut(s) 803, 2083
BsaI GGTCTC 1 cut(s) 647
BsaJI CCNNGG 4 cut(s) 573, 819, 1062, 1557
BsaWI WCCGGW 2 cut(s) 638, 1795
BsaXI ACNNNNNCTCC 2 cut(s) 523, 553
Bsc4I CCNNNNNNNGG 1 cut(s) 1398
Bse118I RCCGGY 1 cut(s) 638
Bse1I ACTGG 2 cut(s) 674, 2134
Bse3DI GCAATG 2 cut(s) 240, 1004
BseAI TCCGGA 1 cut(s) 1795
BseBI CCWGG 1 cut(s) 1064
BseDI CCNNGG 4 cut(s) 573, 819, 1062, 1557
BseLI CCNNNNNNNGG 1 cut(s) 1398
BseMI GCAATG 2 cut(s) 240, 1004
BseMII CTCAG 5 cut(s) 567, 573, 1649, 1872, 2037
BseNI ACTGG 2 cut(s) 674, 2134
BseRI GAGGAG 1 cut(s) 599
BseSI GKGCMC 1 cut(s) 2131
BseXI GCAGC 4 cut(s) 1120, 1237, 1384, 2080
BseYI CCCAGC 1 cut(s) 840
BshFI GGCC 4 cut(s) 1039, 1867, 2021, 2129
BshTI ACCGGT 1 cut(s) 638
BsiHKAI GWGCWC 1 cut(s) 1337
BsiHKCI CYCGRG 2 cut(s) 99, 965
BsiSI CCGG 3 cut(s) 639, 1399, 1796
BslFI GGGAC 3 cut(s) 823, 1242, 1375
BslI CCNNNNNNNGG 1 cut(s) 1398
BsmAI GTCTC 8 cut(s) 450, 581, 647, 694, 804, 1412, 1785, 2226
BsmFI GGGAC 3 cut(s) 823, 1242, 1375
BsmI GAATGC 1 cut(s) 1208
BsnI GGCC 4 cut(s) 1039, 1867, 2021, 2129
Bso31I GGTCTC 1 cut(s) 647
BsoBI CYCGRG 2 cut(s) 99, 965
Bsp119I TTCGAA 1 cut(s) 1775
Bsp120I GGGCCC 1 cut(s) 2127
Bsp1286I GDGCHC 2 cut(s) 1337, 2131
Bsp13I TCCGGA 1 cut(s) 1795
Bsp143I GATC 5 cut(s) 658, 918, 930, 1366, 2122
Bsp1720I GCTNAGC 1 cut(s) 768
Bsp19I CCATGG 1 cut(s) 819
BspACI CCGC 4 cut(s) 108, 119, 1838, 2277
BspANI GGCC 4 cut(s) 1039, 1867, 2021, 2129
BspCNI CTCAG 5 cut(s) 566, 574, 1648, 1873, 2036
BspEI TCCGGA 1 cut(s) 1795
BspHI TCATGA 1 cut(s) 265
BspLI GGNNCC 5 cut(s) 160, 257, 671, 1040, 2129
BspMAI CTGCAG 1 cut(s) 2194
BspOI GCTAGC 1 cut(s) 377
BspPI GGATC 1 cut(s) 926
BspQI GCTCTTC 3 cut(s) 84, 831, 1716
BspT104I TTCGAA 1 cut(s) 1775
BspTNI GGTCTC 1 cut(s) 647
BsrDI GCAATG 2 cut(s) 240, 1004
BsrFI RCCGGY 1 cut(s) 638
BsrI ACTGG 2 cut(s) 674, 2134
BssAI RCCGGY 1 cut(s) 638
BssECI CCNNGG 4 cut(s) 573, 819, 1062, 1557
BssMI GATC 5 cut(s) 658, 918, 930, 1366, 2122
BssNAI GTATAC 1 cut(s) 1087
BssSI CACGAG 1 cut(s) 855
BssT1I CCWWGG 2 cut(s) 573, 819
Bst1107I GTATAC 1 cut(s) 1087
Bst2BI CACGAG 1 cut(s) 855
Bst2UI CCWGG 1 cut(s) 1064
Bst4CI ACNGT 6 cut(s) 303, 472, 496, 1094, 1972, 2250
Bst6I CTCTTC 9 cut(s) 84, 697, 831, 1029, 1665, 1716, 1932, 1977, 2055
BstBAI YACGTR 2 cut(s) 803, 2083
BstBI TTCGAA 1 cut(s) 1775
BstDEI CTNAG 7 cut(s) 501, 553, 582, 768, 1635, 1881, 2023
BstDSI CCRYGG 1 cut(s) 819
BstKTI GATC 5 cut(s) 661, 921, 933, 1369, 2125
BstMAI GTCTC 8 cut(s) 450, 581, 647, 694, 804, 1412, 1785, 2226
BstMBI GATC 5 cut(s) 658, 918, 930, 1366, 2122
BstNI CCWGG 1 cut(s) 1064
BstNSI RCATGY 1 cut(s) 788
BstSCI CCNGG 2 cut(s) 1062, 1397
BstSFI CTRYAG 3 cut(s) 321, 1575, 2190
BstSLI GKGCMC 1 cut(s) 2131
BstSNI TACGTA 1 cut(s) 2083
BstV1I GCAGC 4 cut(s) 1120, 1237, 1384, 2080
BstV2I GAAGAC 1 cut(s) 498
BstX2I RGATCY 1 cut(s) 918
BstXI CCANNNNNNTGG 1 cut(s) 1154
BstYI RGATCY 1 cut(s) 918
BstZ17I GTATAC 1 cut(s) 1087
BsuRI GGCC 4 cut(s) 1039, 1867, 2021, 2129
BtgI CCRYGG 1 cut(s) 819
BtgZI GCGATG 2 cut(s) 781, 2090
BtsI GCAGTG 1 cut(s) 1409
BtsIMutI CAGTG 4 cut(s) 299, 468, 531, 1409
CaiI CAGNNNCTG 2 cut(s) 533, 2006
CciI TCATGA 1 cut(s) 265
Cfr10I RCCGGY 1 cut(s) 638
Cfr13I GGNCC 5 cut(s) 317, 1038, 2127, 2128, 2203
CseI GACGC 1 cut(s) 724
Csp6I GTAC 5 cut(s) 174, 1105, 1423, 2080, 2162
CspAI ACCGGT 1 cut(s) 638
CviQI GTAC 5 cut(s) 174, 1105, 1423, 2080, 2162
DdeI CTNAG 7 cut(s) 501, 553, 582, 768, 1635, 1881, 2023
DpnI GATC 5 cut(s) 660, 920, 932, 1368, 2124
DpnII GATC 5 cut(s) 658, 918, 930, 1366, 2122
DrdI GACNNNNNNGTC 2 cut(s) 686, 1900
DseDI GACNNNNNNGTC 2 cut(s) 686, 1900
Eam1104I CTCTTC 9 cut(s) 84, 697, 831, 1029, 1665, 1716, 1932, 1977, 2055
EarI CTCTTC 9 cut(s) 84, 697, 831, 1029, 1665, 1716, 1932, 1977, 2055
Ecl136II GAGCTC 1 cut(s) 1335
Eco105I TACGTA 1 cut(s) 2083
Eco130I CCWWGG 2 cut(s) 573, 819
Eco24I GRGCYC 2 cut(s) 1337, 2131
Eco31I GGTCTC 1 cut(s) 647
Eco47I GGWCC 2 cut(s) 317, 2203
Eco53kI GAGCTC 1 cut(s) 1335
Eco72I CACGTG 1 cut(s) 803
Eco88I CYCGRG 2 cut(s) 99, 965
EcoICRI GAGCTC 1 cut(s) 1335
EcoO109I RGGNCCY 2 cut(s) 317, 1038
EcoRI GAATTC 2 cut(s) 1459, 1522
EcoRII CCWGG 1 cut(s) 1062
EcoT14I CCWWGG 2 cut(s) 573, 819
EcoT22I ATGCAT 2 cut(s) 953, 1006
EcoT38I GRGCYC 2 cut(s) 1337, 2131
ErhI CCWWGG 2 cut(s) 573, 819
FalI AAGNNNNNCTT 8 cut(s) 1698, 1730, 1769, 1801, 2052, 2084, 2217, 2249
FaqI GGGAC 3 cut(s) 823, 1242, 1375
FauNDI CATATG 1 cut(s) 1729
FbaI TGATCA 2 cut(s) 930, 1366
FblI GTMKAC 1 cut(s) 1086
Fnu4HI GCNGC 5 cut(s) 1134, 1251, 1373, 1839, 2094
FriOI GRGCYC 2 cut(s) 1337, 2131
Fsp4HI GCNGC 5 cut(s) 1134, 1251, 1373, 1839, 2094
FspBI CTAG 7 cut(s) 374, 519, 897, 944, 1232, 1806, 1823
GluI GCNGC 5 cut(s) 1134, 1251, 1373, 1839, 2094
GsaI CCCAGC 1 cut(s) 844
GsuI CTGGAG 2 cut(s) 440, 1926
HaeIII GGCC 4 cut(s) 1039, 1867, 2021, 2129
HapII CCGG 3 cut(s) 639, 1399, 1796
HgaI GACGC 1 cut(s) 724
HincII GTYRAC 3 cut(s) 679, 1053, 1893
HindII GTYRAC 3 cut(s) 679, 1053, 1893
HindIII AAGCTT 3 cut(s) 2038, 2210, 2295
HinfI GANTC 9 cut(s) 122, 448, 551, 578, 1045, 1243, 1442, 1553, 1675
HpaII CCGG 3 cut(s) 639, 1399, 1796
HphI GGTGA 4 cut(s) 1358, 1514, 1999, 2126
Hpy166II GTNNAC 7 cut(s) 679, 793, 1053, 1087, 1893, 2117, 2203
Hpy8I GTNNAC 7 cut(s) 679, 793, 1053, 1087, 1893, 2117, 2203
HpyAV CCTTC 6 cut(s) 362, 1024, 1219, 1615, 2025, 2279
HpyCH4III ACNGT 6 cut(s) 303, 472, 496, 1094, 1972, 2250
HpyCH4IV ACGT 2 cut(s) 802, 2082
HpyF3I CTNAG 7 cut(s) 501, 553, 582, 768, 1635, 1881, 2023
HpySE526I ACGT 2 cut(s) 802, 2082
Kpn2I TCCGGA 1 cut(s) 1795
Ksp22I TGATCA 2 cut(s) 930, 1366
Kzo9I GATC 5 cut(s) 658, 918, 930, 1366, 2122
LguI GCTCTTC 3 cut(s) 84, 831, 1716
LmnI GCTCC 5 cut(s) 544, 1332, 1639, 1907, 2072
Lsp1109I GCAGC 4 cut(s) 1120, 1237, 1384, 2080
MaeI CTAG 7 cut(s) 374, 519, 897, 944, 1232, 1806, 1823
MaeII ACGT 2 cut(s) 802, 2082
MaeIII GTNAC 2 cut(s) 12, 529
MalI GATC 5 cut(s) 660, 920, 932, 1368, 2124
MboI GATC 5 cut(s) 658, 918, 930, 1366, 2122
MfeI CAATTG 1 cut(s) 1952
MflI RGATCY 1 cut(s) 918
MhlI GDGCHC 2 cut(s) 1337, 2131
MlyI GAGTC 3 cut(s) 131, 545, 1252
MmeI TCCRAC 2 cut(s) 1551, 1719
Mph1103I ATGCAT 2 cut(s) 953, 1006
MroI TCCGGA 1 cut(s) 1795
MroXI GAANNNNTTC 1 cut(s) 1674
MseI TTAA 8 cut(s) 236, 342, 410, 758, 1011, 1160, 2036, 2282
MslI CAYNNNNRTG 3 cut(s) 264, 270, 1833
MspA1I CMGCKG 1 cut(s) 1250
MspI CCGG 3 cut(s) 639, 1399, 1796
MspR9I CCNGG 2 cut(s) 1064, 1399
MunI CAATTG 1 cut(s) 1952
Mva1269I GAATGC 1 cut(s) 1208
MvaI CCWGG 1 cut(s) 1064
NciI CCSGG 1 cut(s) 1399
NcoI CCATGG 1 cut(s) 819
NdeI CATATG 1 cut(s) 1729
NdeII GATC 5 cut(s) 658, 918, 930, 1366, 2122
NheI GCTAGC 1 cut(s) 373
NlaIV GGNNCC 5 cut(s) 160, 257, 671, 1040, 2129
NmuCI GTSAC 1 cut(s) 529
NsiI ATGCAT 2 cut(s) 953, 1006
NspI RCATGY 1 cut(s) 788
NspV TTCGAA 1 cut(s) 1775
PaeI GCATGC 1 cut(s) 788
PaeR7I CTCGAG 1 cut(s) 99
PagI TCATGA 1 cut(s) 265
PciSI GCTCTTC 3 cut(s) 84, 831, 1716
PcsI WCGNNNNNNNCGW 1 cut(s) 2254
PctI GAATGC 1 cut(s) 1208
PdmI GAANNNNTTC 1 cut(s) 1674
PfeI GAWTC 6 cut(s) 448, 578, 1045, 1442, 1553, 1675
PinAI ACCGGT 1 cut(s) 638
PkrI GCNGC 5 cut(s) 1135, 1252, 1374, 1840, 2095
PleI GAGTC 3 cut(s) 130, 545, 1251
PmaCI CACGTG 1 cut(s) 803
PmlI CACGTG 1 cut(s) 803
PpsI GAGTC 3 cut(s) 130, 545, 1251
Ppu21I YACGTR 2 cut(s) 803, 2083
PpuMI RGGWCCY 1 cut(s) 317
Psp124BI GAGCTC 1 cut(s) 1337
Psp5II RGGWCCY 1 cut(s) 317
Psp6I CCWGG 1 cut(s) 1062
PspCI CACGTG 1 cut(s) 803
PspFI CCCAGC 1 cut(s) 840
PspGI CCWGG 1 cut(s) 1062
PspN4I GGNNCC 5 cut(s) 160, 257, 671, 1040, 2129
PspOMI GGGCCC 1 cut(s) 2127
PspPI GGNCC 5 cut(s) 317, 1038, 2127, 2128, 2203
PspPPI RGGWCCY 1 cut(s) 317
PspXI VCTCGAGB 1 cut(s) 99
PstI CTGCAG 1 cut(s) 2194
PstNI CAGNNNCTG 2 cut(s) 533, 2006
PsuI RGATCY 1 cut(s) 918
PvuII CAGCTG 1 cut(s) 1250
RsaI GTAC 5 cut(s) 175, 1106, 1424, 2081, 2163
RsaNI GTAC 5 cut(s) 174, 1105, 1423, 2080, 2162
RseI CAYNNNNRTG 3 cut(s) 264, 270, 1833
SacI GAGCTC 1 cut(s) 1337
SapI GCTCTTC 3 cut(s) 84, 831, 1716
SaqAI TTAA 8 cut(s) 236, 342, 410, 758, 1011, 1160, 2036, 2282
SatI GCNGC 5 cut(s) 1134, 1251, 1373, 1839, 2094
Sau3AI GATC 5 cut(s) 658, 918, 930, 1366, 2122
Sau96I GGNCC 5 cut(s) 317, 1038, 2127, 2128, 2203
ScaI AGTACT 1 cut(s) 1106
SchI GAGTC 3 cut(s) 131, 545, 1252
ScrFI CCNGG 2 cut(s) 1064, 1399
SduI GDGCHC 2 cut(s) 1337, 2131
SfcI CTRYAG 3 cut(s) 321, 1575, 2190
Sfr274I CTCGAG 1 cut(s) 99
SfuI TTCGAA 1 cut(s) 1775
SinI GGWCC 2 cut(s) 317, 2203
SlaI CTCGAG 1 cut(s) 99
SmiMI CAYNNNNRTG 3 cut(s) 264, 270, 1833
SmlI CTYRAG 7 cut(s) 99, 704, 710, 922, 1700, 2207, 2223
SmoI CTYRAG 7 cut(s) 99, 704, 710, 922, 1700, 2207, 2223
SnaBI TACGTA 1 cut(s) 2083
SpeI ACTAGT 1 cut(s) 1231
SphI GCATGC 1 cut(s) 788
SsiI CCGC 4 cut(s) 108, 119, 1838, 2277
SspI AATATT 1 cut(s) 346
SspMI CTAG 7 cut(s) 374, 519, 897, 944, 1232, 1806, 1823
SstI GAGCTC 1 cut(s) 1337
StyD4I CCNGG 2 cut(s) 1062, 1397
StyI CCWWGG 2 cut(s) 573, 819
TaaI ACNGT 6 cut(s) 303, 472, 496, 1094, 1972, 2250
TaiI ACGT 2 cut(s) 805, 2085
TaqI TCGA 7 cut(s) 100, 615, 665, 733, 1174, 1775, 2257
TatI WGTACW 3 cut(s) 173, 1104, 1422
TauI GCSGC 1 cut(s) 1841
TfiI GAWTC 6 cut(s) 448, 578, 1045, 1442, 1553, 1675
Tru1I TTAA 8 cut(s) 236, 342, 410, 758, 1011, 1160, 2036, 2282
Tru9I TTAA 8 cut(s) 236, 342, 410, 758, 1011, 1160, 2036, 2282
TscAI CASTG 4 cut(s) 306, 475, 538, 1409
TseFI GTSAC 1 cut(s) 529
TseI GCWGC 4 cut(s) 1133, 1250, 1372, 2093
Tsp45I GTSAC 1 cut(s) 529
TspGWI ACGGA 2 cut(s) 976, 1949
TspRI CASTG 4 cut(s) 306, 475, 538, 1409
VpaK11BI GGWCC 2 cut(s) 317, 2203
XapI RAATTY 7 cut(s) 31, 212, 1459, 1522, 1791, 1809, 2086
XbaI TCTAGA 1 cut(s) 1805
XceI RCATGY 1 cut(s) 788
XhoI CTCGAG 1 cut(s) 99
XmiI GTMKAC 1 cut(s) 1086
XmnI GAANNNNTTC 1 cut(s) 1674
XspI CTAG 7 cut(s) 374, 519, 897, 944, 1232, 1806, 1823
ZrmI AGTACT 1 cut(s) 1106
Zsp2I ATGCAT 2 cut(s) 953, 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.