Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0010098

Physical Location & Seq

Genomic Coordinates Reverse (-)

2021530 .. 2027155

Gene Structure 5626 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG030400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGCAAGACCTGTTACTTTTCAATATGATAAATTTTTTTCTTTATTTCAACTTTTTATTATTATTGGTATTGGTTCAGAAGCGAAGTGAAGAGCTTGCTCGAGCATCTGCGGAACAAGCGGAGTCTGCAAGCAATAGTGGAGATAAATCATCTTCGGGTTCCAAAGCAAGTAGTACAATGGCACATCCATTTTCTGCTCTCTACATGGATGAATTTGACACTTATGTAGCGACCTTGAACATTGCGATTATCTGGTTCCATCTTCATGAATATGCAAAGGCGTTGTCTGTTGTTGAACCACTGTTTCAAAATAGAGGACCTATAGATGAGAAAACTGCTCTTAATATTTGCCTTCTGTTGCTGGATGTGGGGCTAGCTTGCCATGATGCAAAGAAATCTGCTGATGTTTTAATATATCTGGAGAGAGCTTTTGGTGTTAGTTGTATGAATCAGGGAGACAATGGAAGCACTGTGTTGCAACAACCTCCAAACACAGTTGCTAAGTCTTCATTTCCTCCTAGTTCATCAGTCACAGATGCTCCTAATTTGGACTCAGATGGTAATACAAATGCCTTGGATTCTGAGGAGACAGGCGAGTTTGATAATGCTGTTTTCGACATGGATGTAGCACAGCCAACTGGTCTCTTATCTTCCAATGATCTTTCGAGGAACCCAGTTGACATATCTGTCTCTTCTGTTTATCTCAAGCTCAAGACGCAACTTTACAAGGTTCGATTTCTACTTCTCACTCGGAACTTAAAGCAAGCTAAGCGAGAAGTGAAGCATGCTGTGAACATCGCACGTGGCAGAGACTTATCTATGGCTCTTCTCTTGAAGTCCCAGCTTGAATATGCTCGTGGTAATTATCGTAAAGCAATCAAGCTGTTGATGGCATCTAGCAACCGAACAGATACAAGGATCTCGAGCATGATCAACAATAATCTAGGATGCGTCTATTATCAGCTTGGGAAATATCACACATCATCCGTATTCTTCTCCAATGCATTGCTTAATTGTTCATCTCTTCGGAAGGACAGGCCTCTGAATCTGTCAACTTTTTCCCTGGATAATTCCCTCCTGATAGTATACAACTGTGGTATGCAGTACTTGGCTTGTGGAAAACCATTACTTGCTGCTCGCTGTTTCCAAAAGGCTGGTTTAATTTTCTACAATCGACCTCTGTTGTGGCTTCGGCTTGCTGAATGCTGTCTGATGGCTTTAGAGAAGGGACTAGTCAAAAACAGTCCAGCTGCATCAGAAGTCAGAGTTTATGTTATTGGCAAGGGTAAGTGGAGGCAACTTGTCATGCAGGATGGGGTTGTTAAGAATGGGAACTCTGAAAAAGGTGATTTATTTTTGGGTAGTGATCAGCAGCCCAAGCTCTCAATGTCCCTTGCCCGGCAGTGTCTCTCTAATGCCTTGTACTTACTAAACCATTCCGAATCAAGCTATTGTAAGAATTCTTTGCCATCTAATTTCTTCTTGGACGATAATGAGTTAGGTGAAGTGGCATCGTCCAAGAATTCCAACCACAAGAACTTGCACAACATTGATTCCGAGGCTTCTGTGCTGTCTGTAGGCTTGGGTCAGGTTAGTGCAAATGGGGATGCAAAAGAGCAGAAGGGAGGAACTACTCAGGAGCTTGTGCAAAACTCCCTTTCCTCCTATGAAGAGATTCGTAAAAAGGAAAATCTGTTGCTCAAGCAAGCTCTTCTTGCTAATCAGGCATATGTGGAGTTGGAATTGGAAAATCCTCTGAAAGCCTTGTCAATTTCGAAGGCTCTCTTGGAAATTCCGGAATGTTCTAGAATTTACATATTTCTAGGTCATGTGTATGCGGCAGAGGCTCTTTGCTTGCTAAACAGGCCAAAGGATGCTGCTGAGCATTTGTTGACATATTTGTCTGGAGCTAATAATGTTGAATTGCCATTCACAGAAGAGGACTTTGAGCAATTGAAGGGGGTCAGGACTGTTGATTATGAAGAGGTGAATGGAGGGTCAGCGACTGCAAAACCTTCGGCCTCAGAAGACGGGTTAAGCTTTGTGTTCATCAAGCCAGAAGAGGCACTTGGAGCGATGTACGTAAATTTTGCTGCCTTGTACGCCATGCAGGGTGAACTTGATCGGGCTCACCAGTTTGTTGCACAGGCGTTGTCCATAGTACCCAACAATCTACAAGCTTCTTTGACTGCAGTTTATGTGGACCTCAAGCTTGGTAAGTCTCAAGAAGCCCTTGCCAAGTTGAAACGGTGTAGTCGAATTACATTCCTTCCTAGCGGATTAACATTGAATAAAGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

TPR_8

Protein Analysis

767

Amino Acids

84.44

Weight (kDa)

6.36

Isoelectric Point (pI)

37.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010098)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35430
fragaria_vesca	FvH4_1g02580 FvH4_1g02580
malus_domestica	MD02G1023300.v1.1 MD15G1166400.v1.1
prunus_persica	Prupe.7G248800_v2.0.a1 Prupe.7G248800_v2.0.a1 Prupe.7G248800_v2.0.a1
pyrus_communis	pycom02g02030 pycom15g14870
rosa_chinensis	RchiOBHm_Chr2g0087611
rosa_laevigata	RLG00000015886
rosa_multiflora	Rmu_sc0002299.1_g000034
rosa_roxburghii	Rroxscaffold_2G00153370
rosa_rugosa	Rorug01G0477000 Rorug01G0477100
rosa_samantha	Rh2AG030700 Rh2BG030400 Rh2CG030800 Rh2DG030700
rosa_wichuraiana	Rw2G002430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	686, 1900
AccI	GTMKAC	1 cut(s)	1086
AccIII	TCCGGA	1 cut(s)	1795
AciI	CCGC	4 cut(s)	110, 119, 1838, 2277
AclWI	GGATC	1 cut(s)	926
AcsI	RAATTY	7 cut(s)	31, 212, 1459, 1522, 1791, 1809, 2086
AcvI	CACGTG	1 cut(s)	803
AfaI	GTAC	6 cut(s)	175, 1106, 1424, 2081, 2102, 2163
AfiI	CCNNNNNNNGG	1 cut(s)	1398
AhlI	ACTAGT	1 cut(s)	1231
AjnI	CCWGG	1 cut(s)	1062
AjuI	GAANNNNNNNTTGG	4 cut(s)	1769, 1801, 2052, 2084
Alw26I	GTCTC	7 cut(s)	450, 581, 647, 694, 804, 1412, 2226
AlwI	GGATC	1 cut(s)	926
AlwNI	CAGNNNCTG	1 cut(s)	2006
Ama87I	CYCGRG	2 cut(s)	99, 922
Aor13HI	TCCGGA	1 cut(s)	1795
AoxI	GGCC	3 cut(s)	1037, 1865, 2019
ApeKI	GCWGC	5 cut(s)	1133, 1250, 1372, 1877, 2093
ApoI	RAATTY	7 cut(s)	31, 212, 1459, 1522, 1791, 1809, 2086
ArsI	GACNNNNNNTTYG	2 cut(s)	269, 301
Asp700I	GAANNNNTTC	1 cut(s)	1674
AspS9I	GGNCC	2 cut(s)	317, 2203
AsuC2I	CCSGG	1 cut(s)	1399
AsuHPI	GGTGA	5 cut(s)	1358, 1514, 1999, 2123, 2126
AsuII	TTCGAA	1 cut(s)	1775
AsuNHI	GCTAGC	1 cut(s)	373
AvaI	CYCGRG	2 cut(s)	99, 922
AvaII	GGWCC	2 cut(s)	317, 2203
BanII	GRGCYC	1 cut(s)	2131
BauI	CACGAG	1 cut(s)	855
BbrPI	CACGTG	1 cut(s)	803
BbsI	GAAGAC	2 cut(s)	498, 2034
BbvI	GCAGC	5 cut(s)	1120, 1237, 1384, 1864, 2080
BccI	CCATC	6 cut(s)	267, 551, 883, 1207, 1307, 1477
BcgI	CGANNNNNNTGC	2 cut(s)	1998, 2032
BciT130I	CCWGG	1 cut(s)	1064
BclI	TGATCA	2 cut(s)	930, 1366
BcnI	CCSGG	1 cut(s)	1399
BcoDI	GTCTC	7 cut(s)	450, 581, 647, 694, 804, 1412, 2226
BcuI	ACTAGT	1 cut(s)	1231
BfaI	CTAG	8 cut(s)	374, 519, 897, 944, 1232, 1806, 1823, 2274
BfmI	CTRYAG	3 cut(s)	321, 1575, 2190
BisI	GCNGC	6 cut(s)	1134, 1251, 1373, 1839, 1878, 2094
BlpI	GCTNAGC	2 cut(s)	768, 1881
BlsI	GCNGC	6 cut(s)	1135, 1252, 1374, 1840, 1879, 2095
BmcAI	AGTACT	1 cut(s)	1106
Bme1390I	CCNGG	2 cut(s)	1064, 1399
Bme18I	GGWCC	2 cut(s)	317, 2203
BmeT110I	CYCGRG	2 cut(s)	99, 922
BmgT120I	GGNCC	2 cut(s)	317, 2203
BmiI	GGNNCC	3 cut(s)	160, 257, 671
BmrFI	CCNGG	2 cut(s)	1064, 1399
BmrI	ACTGGG	1 cut(s)	668
BmsI	GCATC	9 cut(s)	113, 376, 526, 902, 938, 1262, 1520, 1597, 1864
BmtI	GCTAGC	1 cut(s)	377
BmuI	ACTGGG	1 cut(s)	668
BpiI	GAAGAC	2 cut(s)	498, 2034
BpmI	CTGGAG	2 cut(s)	440, 1926
Bpu1102I	GCTNAGC	2 cut(s)	768, 1881
Bpu14I	TTCGAA	1 cut(s)	1775
BpuEI	CTTGAG	5 cut(s)	689, 695, 1685, 2192, 2208
BpuMI	CCSGG	1 cut(s)	1399
BsaAI	YACGTR	2 cut(s)	803, 2083
BsaI	GGTCTC	1 cut(s)	647
BsaJI	CCNNGG	3 cut(s)	573, 1062, 1557
BsaWI	WCCGGW	1 cut(s)	1795
BsaXI	ACNNNNNCTCC	2 cut(s)	523, 553
Bsc4I	CCNNNNNNNGG	1 cut(s)	1398
Bse1I	ACTGG	3 cut(s)	643, 674, 2134
Bse3DI	GCAATG	2 cut(s)	240, 1004
BseAI	TCCGGA	1 cut(s)	1795
BseBI	CCWGG	1 cut(s)	1064
BseDI	CCNNGG	3 cut(s)	573, 1062, 1557
BseGI	GGATG	9 cut(s)	184, 214, 370, 628, 953, 983, 1318, 1612, 1879
BseLI	CCNNNNNNNGG	1 cut(s)	1398
BseMI	GCAATG	2 cut(s)	240, 1004
BseMII	CTCAG	5 cut(s)	567, 573, 1649, 1872, 2037
BseNI	ACTGG	3 cut(s)	643, 674, 2134
BseRI	GAGGAG	1 cut(s)	599
BseXI	GCAGC	5 cut(s)	1120, 1237, 1384, 1864, 2080
BseYI	CCCAGC	1 cut(s)	840
BshFI	GGCC	3 cut(s)	1039, 1867, 2021
BsiHKCI	CYCGRG	2 cut(s)	99, 922
BsiSI	CCGG	2 cut(s)	1399, 1796
BslFI	GGGAC	3 cut(s)	823, 1242, 1375
BslI	CCNNNNNNNGG	1 cut(s)	1398
BsmAI	GTCTC	7 cut(s)	450, 581, 647, 694, 804, 1412, 2226
BsmFI	GGGAC	3 cut(s)	823, 1242, 1375
BsmI	GAATGC	1 cut(s)	1208
BsnI	GGCC	3 cut(s)	1039, 1867, 2021
Bso31I	GGTCTC	1 cut(s)	647
BsoBI	CYCGRG	2 cut(s)	99, 922
Bsp119I	TTCGAA	1 cut(s)	1775
Bsp1286I	GDGCHC	1 cut(s)	2131
Bsp13I	TCCGGA	1 cut(s)	1795
Bsp143I	GATC	5 cut(s)	658, 918, 930, 1366, 2122
Bsp1720I	GCTNAGC	2 cut(s)	768, 1881
BspACI	CCGC	4 cut(s)	110, 119, 1838, 2277
BspANI	GGCC	3 cut(s)	1039, 1867, 2021
BspCNI	CTCAG	5 cut(s)	566, 574, 1648, 1873, 2036
BspEI	TCCGGA	1 cut(s)	1795
BspHI	TCATGA	1 cut(s)	265
BspLI	GGNNCC	3 cut(s)	160, 257, 671
BspMAI	CTGCAG	1 cut(s)	2194
BspOI	GCTAGC	1 cut(s)	377
BspPI	GGATC	1 cut(s)	926
BspQI	GCTCTTC	3 cut(s)	84, 831, 1716
BspT104I	TTCGAA	1 cut(s)	1775
BspTNI	GGTCTC	1 cut(s)	647
BsrDI	GCAATG	2 cut(s)	240, 1004
BsrI	ACTGG	3 cut(s)	643, 674, 2134
BssECI	CCNNGG	3 cut(s)	573, 1062, 1557
BssMI	GATC	5 cut(s)	658, 918, 930, 1366, 2122
BssNAI	GTATAC	1 cut(s)	1087
BssSI	CACGAG	1 cut(s)	855
BssT1I	CCWWGG	1 cut(s)	573
Bst1107I	GTATAC	1 cut(s)	1087
Bst2BI	CACGAG	1 cut(s)	855
Bst2UI	CCWGG	1 cut(s)	1064
Bst4CI	ACNGT	7 cut(s)	303, 472, 496, 1094, 1244, 1972, 2250
Bst6I	CTCTTC	9 cut(s)	84, 697, 831, 1029, 1665, 1716, 1932, 1977, 2055
BstBAI	YACGTR	2 cut(s)	803, 2083
BstBI	TTCGAA	1 cut(s)	1775
BstDEI	CTNAG	7 cut(s)	501, 553, 582, 768, 1635, 1881, 2023
BstF5I	GGATG	9 cut(s)	184, 214, 370, 628, 953, 983, 1318, 1612, 1879
BstKTI	GATC	5 cut(s)	661, 921, 933, 1369, 2125
BstMAI	GTCTC	7 cut(s)	450, 581, 647, 694, 804, 1412, 2226
BstMBI	GATC	5 cut(s)	658, 918, 930, 1366, 2122
BstNI	CCWGG	1 cut(s)	1064
BstNSI	RCATGY	1 cut(s)	788
BstSCI	CCNGG	2 cut(s)	1062, 1397
BstSFI	CTRYAG	3 cut(s)	321, 1575, 2190
BstSNI	TACGTA	1 cut(s)	2083
BstV1I	GCAGC	5 cut(s)	1120, 1237, 1384, 1864, 2080
BstV2I	GAAGAC	2 cut(s)	498, 2034
BstX2I	RGATCY	1 cut(s)	918
BstXI	CCANNNNNNTGG	1 cut(s)	1154
BstYI	RGATCY	1 cut(s)	918
BstZ17I	GTATAC	1 cut(s)	1087
BsuRI	GGCC	3 cut(s)	1039, 1867, 2021
BtgZI	GCGATG	2 cut(s)	781, 2090
BtsCI	GGATG	9 cut(s)	184, 214, 370, 628, 953, 983, 1318, 1612, 1879
BtsI	GCAGTG	1 cut(s)	1409
BtsIMutI	CAGTG	3 cut(s)	299, 468, 1409
CaiI	CAGNNNCTG	1 cut(s)	2006
CciI	TCATGA	1 cut(s)	265
Cfr13I	GGNCC	2 cut(s)	317, 2203
CseI	GACGC	2 cut(s)	724, 940
Csp6I	GTAC	6 cut(s)	174, 1105, 1423, 2080, 2101, 2162
CviAII	CATG	9 cut(s)	205, 266, 383, 619, 785, 928, 1306, 1829, 2107
CviQI	GTAC	6 cut(s)	174, 1105, 1423, 2080, 2101, 2162
DdeI	CTNAG	7 cut(s)	501, 553, 582, 768, 1635, 1881, 2023
DpnI	GATC	5 cut(s)	660, 920, 932, 1368, 2124
DpnII	GATC	5 cut(s)	658, 918, 930, 1366, 2122
DrdI	GACNNNNNNGTC	2 cut(s)	686, 1900
DseDI	GACNNNNNNGTC	2 cut(s)	686, 1900
Eam1104I	CTCTTC	9 cut(s)	84, 697, 831, 1029, 1665, 1716, 1932, 1977, 2055
EarI	CTCTTC	9 cut(s)	84, 697, 831, 1029, 1665, 1716, 1932, 1977, 2055
Eco105I	TACGTA	1 cut(s)	2083
Eco130I	CCWWGG	1 cut(s)	573
Eco147I	AGGCCT	1 cut(s)	1039
Eco24I	GRGCYC	1 cut(s)	2131
Eco31I	GGTCTC	1 cut(s)	647
Eco47I	GGWCC	2 cut(s)	317, 2203
Eco72I	CACGTG	1 cut(s)	803
Eco88I	CYCGRG	2 cut(s)	99, 922
EcoO109I	RGGNCCY	1 cut(s)	317
EcoRI	GAATTC	2 cut(s)	1459, 1522
EcoRII	CCWGG	1 cut(s)	1062
EcoT14I	CCWWGG	1 cut(s)	573
EcoT22I	ATGCAT	1 cut(s)	1006
EcoT38I	GRGCYC	1 cut(s)	2131
ErhI	CCWWGG	1 cut(s)	573
FaeI	CATG	9 cut(s)	208, 269, 386, 622, 788, 931, 1309, 1832, 2110
FalI	AAGNNNNNCTT	8 cut(s)	1698, 1730, 1769, 1801, 2052, 2084, 2217, 2249
FaqI	GGGAC	3 cut(s)	823, 1242, 1375
FatI	CATG	9 cut(s)	204, 265, 382, 618, 784, 927, 1305, 1828, 2106
FauNDI	CATATG	1 cut(s)	1729
FbaI	TGATCA	2 cut(s)	930, 1366
FblI	GTMKAC	1 cut(s)	1086
Fnu4HI	GCNGC	6 cut(s)	1134, 1251, 1373, 1839, 1878, 2094
FokI	GGATG	9 cut(s)	171, 221, 377, 635, 960, 970, 1325, 1619, 1886
FriOI	GRGCYC	1 cut(s)	2131
Fsp4HI	GCNGC	6 cut(s)	1134, 1251, 1373, 1839, 1878, 2094
FspBI	CTAG	8 cut(s)	374, 519, 897, 944, 1232, 1806, 1823, 2274
GluI	GCNGC	6 cut(s)	1134, 1251, 1373, 1839, 1878, 2094
GsaI	CCCAGC	1 cut(s)	844
GsuI	CTGGAG	2 cut(s)	440, 1926
HaeIII	GGCC	3 cut(s)	1039, 1867, 2021
HapII	CCGG	2 cut(s)	1399, 1796
HgaI	GACGC	2 cut(s)	724, 940
Hin1II	CATG	9 cut(s)	208, 269, 386, 622, 788, 931, 1309, 1832, 2110
HincII	GTYRAC	3 cut(s)	679, 1053, 1893
HindII	GTYRAC	3 cut(s)	679, 1053, 1893
HindIII	AAGCTT	4 cut(s)	2038, 2178, 2210, 2295
HinfI	GANTC	8 cut(s)	122, 448, 551, 578, 1045, 1442, 1553, 1675
HpaII	CCGG	2 cut(s)	1399, 1796
HphI	GGTGA	5 cut(s)	1358, 1514, 1999, 2123, 2126
Hpy166II	GTNNAC	7 cut(s)	679, 793, 1053, 1087, 1893, 2117, 2203
Hpy8I	GTNNAC	7 cut(s)	679, 793, 1053, 1087, 1893, 2117, 2203
HpyAV	CCTTC	8 cut(s)	362, 1024, 1219, 1615, 1771, 1951, 2025, 2279
HpyCH4III	ACNGT	7 cut(s)	303, 472, 496, 1094, 1244, 1972, 2250
HpyCH4IV	ACGT	2 cut(s)	802, 2082
HpyF3I	CTNAG	7 cut(s)	501, 553, 582, 768, 1635, 1881, 2023
HpySE526I	ACGT	2 cut(s)	802, 2082
Hsp92II	CATG	9 cut(s)	208, 269, 386, 622, 788, 931, 1309, 1832, 2110
Kpn2I	TCCGGA	1 cut(s)	1795
Ksp22I	TGATCA	2 cut(s)	930, 1366
Kzo9I	GATC	5 cut(s)	658, 918, 930, 1366, 2122
LguI	GCTCTTC	3 cut(s)	84, 831, 1716
LmnI	GCTCC	4 cut(s)	544, 1639, 1907, 2072
Lsp1109I	GCAGC	5 cut(s)	1120, 1237, 1384, 1864, 2080
LweI	GCATC	9 cut(s)	113, 376, 526, 902, 938, 1262, 1520, 1597, 1864
MaeI	CTAG	8 cut(s)	374, 519, 897, 944, 1232, 1806, 1823, 2274
MaeII	ACGT	2 cut(s)	802, 2082
MaeIII	GTNAC	2 cut(s)	12, 529
MalI	GATC	5 cut(s)	660, 920, 932, 1368, 2124
MboI	GATC	5 cut(s)	658, 918, 930, 1366, 2122
MfeI	CAATTG	1 cut(s)	1952
MflI	RGATCY	1 cut(s)	918
MhlI	GDGCHC	1 cut(s)	2131
MlyI	GAGTC	2 cut(s)	131, 545
MmeI	TCCRAC	2 cut(s)	1551, 1719
Mph1103I	ATGCAT	1 cut(s)	1006
MroI	TCCGGA	1 cut(s)	1795
MroXI	GAANNNNTTC	1 cut(s)	1674
MseI	TTAA	8 cut(s)	342, 410, 758, 1011, 1160, 1323, 2036, 2282
MslI	CAYNNNNRTG	3 cut(s)	264, 270, 1833
MspA1I	CMGCKG	1 cut(s)	1250
MspI	CCGG	2 cut(s)	1399, 1796
MspR9I	CCNGG	2 cut(s)	1064, 1399
MunI	CAATTG	1 cut(s)	1952
Mva1269I	GAATGC	1 cut(s)	1208
MvaI	CCWGG	1 cut(s)	1064
NciI	CCSGG	1 cut(s)	1399
NdeI	CATATG	1 cut(s)	1729
NdeII	GATC	5 cut(s)	658, 918, 930, 1366, 2122
NheI	GCTAGC	1 cut(s)	373
NlaIII	CATG	9 cut(s)	208, 269, 386, 622, 788, 931, 1309, 1832, 2110
NlaIV	GGNNCC	3 cut(s)	160, 257, 671
NmuCI	GTSAC	1 cut(s)	529
NsiI	ATGCAT	1 cut(s)	1006
NspI	RCATGY	1 cut(s)	788
NspV	TTCGAA	1 cut(s)	1775
PaeI	GCATGC	1 cut(s)	788
PaeR7I	CTCGAG	2 cut(s)	99, 922
PagI	TCATGA	1 cut(s)	265
PceI	AGGCCT	1 cut(s)	1039
PciSI	GCTCTTC	3 cut(s)	84, 831, 1716
PcsI	WCGNNNNNNNCGW	1 cut(s)	2254
PctI	GAATGC	1 cut(s)	1208
PdmI	GAANNNNTTC	1 cut(s)	1674
PfeI	GAWTC	6 cut(s)	448, 578, 1045, 1442, 1553, 1675
PkrI	GCNGC	6 cut(s)	1135, 1252, 1374, 1840, 1879, 2095
PleI	GAGTC	2 cut(s)	130, 545
PmaCI	CACGTG	1 cut(s)	803
PmlI	CACGTG	1 cut(s)	803
PpsI	GAGTC	2 cut(s)	130, 545
Ppu21I	YACGTR	2 cut(s)	803, 2083
PpuMI	RGGWCCY	1 cut(s)	317
Psp5II	RGGWCCY	1 cut(s)	317
Psp6I	CCWGG	1 cut(s)	1062
PspCI	CACGTG	1 cut(s)	803
PspFI	CCCAGC	1 cut(s)	840
PspGI	CCWGG	1 cut(s)	1062
PspN4I	GGNNCC	3 cut(s)	160, 257, 671
PspPI	GGNCC	2 cut(s)	317, 2203
PspPPI	RGGWCCY	1 cut(s)	317
PspXI	VCTCGAGB	1 cut(s)	99
PstI	CTGCAG	1 cut(s)	2194
PstNI	CAGNNNCTG	1 cut(s)	2006
PsuI	RGATCY	1 cut(s)	918
PvuII	CAGCTG	1 cut(s)	1250
RsaI	GTAC	6 cut(s)	175, 1106, 1424, 2081, 2102, 2163
RsaNI	GTAC	6 cut(s)	174, 1105, 1423, 2080, 2101, 2162
RseI	CAYNNNNRTG	3 cut(s)	264, 270, 1833
SapI	GCTCTTC	3 cut(s)	84, 831, 1716
SaqAI	TTAA	8 cut(s)	342, 410, 758, 1011, 1160, 1323, 2036, 2282
SatI	GCNGC	6 cut(s)	1134, 1251, 1373, 1839, 1878, 2094
Sau3AI	GATC	5 cut(s)	658, 918, 930, 1366, 2122
Sau96I	GGNCC	2 cut(s)	317, 2203
ScaI	AGTACT	1 cut(s)	1106
SchI	GAGTC	2 cut(s)	131, 545
ScrFI	CCNGG	2 cut(s)	1064, 1399
SduI	GDGCHC	1 cut(s)	2131
SfaNI	GCATC	9 cut(s)	113, 376, 526, 902, 938, 1262, 1520, 1597, 1864
SfcI	CTRYAG	3 cut(s)	321, 1575, 2190
Sfr274I	CTCGAG	2 cut(s)	99, 922
SfuI	TTCGAA	1 cut(s)	1775
SinI	GGWCC	2 cut(s)	317, 2203
SlaI	CTCGAG	2 cut(s)	99, 922
SmiMI	CAYNNNNRTG	3 cut(s)	264, 270, 1833
SmlI	CTYRAG	7 cut(s)	99, 704, 710, 922, 1700, 2207, 2223
SmoI	CTYRAG	7 cut(s)	99, 704, 710, 922, 1700, 2207, 2223
SnaBI	TACGTA	1 cut(s)	2083
SpeI	ACTAGT	1 cut(s)	1231
SphI	GCATGC	1 cut(s)	788
SseBI	AGGCCT	1 cut(s)	1039
SsiI	CCGC	4 cut(s)	110, 119, 1838, 2277
SspI	AATATT	1 cut(s)	346
SspMI	CTAG	8 cut(s)	374, 519, 897, 944, 1232, 1806, 1823, 2274
StuI	AGGCCT	1 cut(s)	1039
StyD4I	CCNGG	2 cut(s)	1062, 1397
StyI	CCWWGG	1 cut(s)	573
TaaI	ACNGT	7 cut(s)	303, 472, 496, 1094, 1244, 1972, 2250
TaiI	ACGT	2 cut(s)	805, 2085
TaqI	TCGA	8 cut(s)	100, 615, 665, 733, 923, 1174, 1775, 2257
TatI	WGTACW	3 cut(s)	173, 1104, 1422
TauI	GCSGC	1 cut(s)	1841
TfiI	GAWTC	6 cut(s)	448, 578, 1045, 1442, 1553, 1675
Tru1I	TTAA	8 cut(s)	342, 410, 758, 1011, 1160, 1323, 2036, 2282
Tru9I	TTAA	8 cut(s)	342, 410, 758, 1011, 1160, 1323, 2036, 2282
TscAI	CASTG	3 cut(s)	306, 475, 1409
TseFI	GTSAC	1 cut(s)	529
TseI	GCWGC	5 cut(s)	1133, 1250, 1372, 1877, 2093
Tsp45I	GTSAC	1 cut(s)	529
TspGWI	ACGGA	1 cut(s)	976
TspRI	CASTG	3 cut(s)	306, 475, 1409
VpaK11BI	GGWCC	2 cut(s)	317, 2203
XapI	RAATTY	7 cut(s)	31, 212, 1459, 1522, 1791, 1809, 2086
XbaI	TCTAGA	1 cut(s)	1805
XceI	RCATGY	1 cut(s)	788
XhoI	CTCGAG	2 cut(s)	99, 922
XmiI	GTMKAC	1 cut(s)	1086
XmnI	GAANNNNTTC	1 cut(s)	1674
XspI	CTAG	8 cut(s)	374, 519, 897, 944, 1232, 1806, 1823, 2274
ZrmI	AGTACT	1 cut(s)	1106
Zsp2I	ATGCAT	1 cut(s)	1006

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.