Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0010098

Physical Location & Seq

Genomic Coordinates Forward (+)

90135831 .. 90141586

Gene Structure 5756 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00153370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGGCCGCCGCCTCCTCATCAGCGTCTCCACCGAGCCGCGACGGCTCCTCCTCATCGCCTGAGGACGACGCCGTTTTGTCCGCCACCAGGGCTTTTGCGCAGGACGCCTTGCTGCAATTCCAGTCAGGGAAGTTCGATCAGTGCCTCACCGCCTTGCACGAGTGCCTCAAGAGGAAGGCCGGCGATCCCAAAATATTTCATAATATTGGACTTGCGGAATTCTATAGAGATGGTTGTTCAGATCCTAAGAGGTTGCTTGAAGTACTCAATGACGTCAAGCGAAGTGAAGAGCTTGCTCGAGCATCTGCAGAACATGCGGAGTCTGCAAGCAATAGTGGAGATAAATCATCTTCGGGTTCCAAAGCAAGTAGTACAATGGCACATCCATTTTCTGCTCTCTACATGGATGAATTTGACACTTATGTAGCGACCTTAAACATTGCGATTATCTGGTTCCATCTTCATGAATATGCAAAGGCGTTGTCTGTTGTTGAACCACTGTTTCAAAATAGAGGACCTATAGATGAGAAAACTGCTCTAAATATTTGCCTTCTGTTGCTGGATGTGGGGCTAGCTTGCCATGATGCAAAGAAATCTGCTGATGTTTTAATATATCTGGAGAGAGCTTTTGGTGTTAGTTGTATGAATCAGGGAGACAATGGAAGTGCTGTGTCGCAACAACCTCCAAGCACAGTTGCTAAGTCTTCATTTCCTCCTAGTTCATCAGTCACAGATGCTCCCAATTTGGACTCAGATGGTAATACAAATGCCTTGGATTCTGAGGAGACAGGCGAGTTTGATAATGCGGTTTTCGACATGGTTGTAGCACAGCCAACTGGTCTCTTATCTTCCAATGATCTTTCGAGGAACCCAGTTGACATATCTGTCTCTTCTGTTTATCTCAAGCTTAAGACGCAACTTTACAAGGTTCGATTTCTACTACTCACTCGGAACTTAAAGCAAGCTAAGCGAGAAGTGAAGCATGCTGTGAACATCGCACGTGGCAGAGACTTATCTATGGCTCTTCTCTTGAAGTCCCAGCTTGAATATGCTCGTGGTAATTATCGTAAAGCAATCAAGCTGTTGATGGCATCTAGCAACCGAACAGATACAAGGATCTCGAGCATGATCAACAATAATCTAGGATGCATCTATTATCAGCTTGGGAAATATCACACATCATCCGTATTCTTCTCCAATGCATTGCTTAATTGTTCATCTCTTCGGAAGGACAGGCCTCTGAATCTGTCAACTTTTTCCCTGGATAATTCCCTCCTGATAGTATACAACTGTGGTATGCAGTACTTGGCTTGTGGAAAACCATTACTTGCTGCTTGCTGTTTCCAAAAGGCTGGTATAATTTTCTACAATCGACCTCTGTTGTGGCTTCGGCTTGCTGAATGCTGTCTGATGGCTTTAGAGAAGGGACTAGTCAAAAAGAGTCCAGCTGCATCAGAAGTCAGAGTTTATGTTATTGGCAAGGGTAAGTGGAGGCAACTTGTCATGCAGGATGGGGTTGTCAAGAATGGGAACTCTGAAAAAGGTGATTTATTTTTTGGTAGTGATCAGCAGCCCAAGCTCTCAATGTCCCTTGCCCGGCAGTGTCTCTCTAATGCCTTGTACTTACTAAACCATTCCGAATCAAGCTATTGTAAGAATTCTTTGCCATCTACTTTCTTCTTGGACGAGAATGAGTTAGGTGAAGTGGCATCGTCCAAGAATTCCAACCACAAGAACTTGCACAACATTGATTCCGAGGCTTCTGTGTTGTCTGTAGGCTTGGGTCAGGTTAGTGCAAATGGGGATGCAAAAGAGCAGAAGGGAGGAACTACTCAGGAGCTTGTGCAAAACTCCCTTTCCTCCTATGAAGAGATTCGTAAAAAGGAAAATCTGTTGCTCAAGCAAGCTCTTCTTGCTAATCAGGCGTATGTGGAGTTGGAATTGGAAAATCCTCTGAAAGCCTTGTCAATTTCGAAGTCTCTCTTGGAAATTCCGGAATGTTCTAGAATTTACATATTTCTAGGTCATGTGTATGCGGCAGAGGCTCTTTGCTTGCTAAACAGGCCAAAGGATGCTGCTGAGCATTTGTTGACATATTTGTCTGGATCTAATAATGTTGAATTGCCATTCACGGAAGAGGACTTTGAGCAATTGAAAGGCGTCAGGACTGTTGATTATGAAGAGGTGAATGGAGGGTCAGCGACTGCAAAACCTTCGGCCTCAGAAGACGGGTTAAGCTTTGTGTTCATCAAGCCAGAAGAGGCACTTGGAGCGATGTACGTAAATTTTGCTGCCTTGTACGCCATGCAGGGTGAACTTGATCGGGCTCACCAGTTTGTTGCACAGGCATTGTCCATAGTACCCAACAATCTACAGGCTTCTTTGACTGCAGTTTATGTGGACCTCAAGCTTGGTAAGTCTCAAGAAGCCCTTGCCAAGTTGAAACGATGTAGTCGAATTACATTCCTTCCAAGTGGATTAACATTGAATAAAGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

TPR_8

Protein Analysis

833

Amino Acids

91.04

Weight (kDa)

6.36

Isoelectric Point (pI)

43.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010098)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35430
fragaria_vesca	FvH4_1g02580 FvH4_1g02580
malus_domestica	MD02G1023300.v1.1 MD15G1166400.v1.1
prunus_persica	Prupe.7G248800_v2.0.a1 Prupe.7G248800_v2.0.a1 Prupe.7G248800_v2.0.a1
pyrus_communis	pycom02g02030 pycom15g14870
rosa_chinensis	RchiOBHm_Chr2g0087611
rosa_laevigata	RLG00000015886
rosa_multiflora	Rmu_sc0002299.1_g000034
rosa_roxburghii	Rroxscaffold_2G00153370
rosa_rugosa	Rorug01G0477000 Rorug01G0477100
rosa_samantha	Rh2AG030700 Rh2BG030400 Rh2CG030800 Rh2DG030700
rosa_wichuraiana	Rw2G002430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	884, 2098
AatII	GACGTC	1 cut(s)	276
Acc16I	TGCGCA	1 cut(s)	99
AccI	GTMKAC	1 cut(s)	1284
AccII	CGCG	1 cut(s)	39
AccIII	TCCGGA	1 cut(s)	1993
AciI	CCGC	9 cut(s)	6, 9, 37, 81, 150, 215, 317, 806, 2036
AclWI	GGATC	4 cut(s)	179, 236, 1124, 2113
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	7 cut(s)	218, 410, 1657, 1720, 1989, 2007, 2284
AcvI	CACGTG	1 cut(s)	1001
AcyI	GRCGYC	4 cut(s)	69, 105, 273, 2160
AfaI	GTAC	7 cut(s)	264, 373, 1304, 1622, 2279, 2300, 2361
AfiI	CCNNNNNNNGG	2 cut(s)	87, 1596
AflII	CTTAAG	1 cut(s)	908
AgsI	TTSAA	9 cut(s)	260, 494, 506, 1033, 1046, 2120, 2155, 2443, 2488
AhlI	ACTAGT	1 cut(s)	1429
AjnI	CCWGG	2 cut(s)	86, 1260
AjuI	GAANNNNNNNTTGG	4 cut(s)	1967, 1999, 2250, 2282
Alw26I	GTCTC	9 cut(s)	30, 648, 779, 845, 892, 1002, 1610, 1983, 2424
AlwI	GGATC	4 cut(s)	179, 236, 1124, 2113
AlwNI	CAGNNNCTG	1 cut(s)	2204
Ama87I	CYCGRG	2 cut(s)	297, 1120
Aor13HI	TCCGGA	1 cut(s)	1993
AoxI	GGCC	5 cut(s)	3, 177, 1235, 2063, 2217
ApeKI	GCWGC	6 cut(s)	112, 1331, 1448, 1570, 2075, 2291
ApoI	RAATTY	7 cut(s)	218, 410, 1657, 1720, 1989, 2007, 2284
ArsI	GACNNNNNNTTYG	2 cut(s)	467, 499
Asp700I	GAANNNNTTC	1 cut(s)	1872
AspLEI	GCGC	1 cut(s)	100
AspS9I	GGNCC	2 cut(s)	515, 2401
AsuC2I	CCSGG	1 cut(s)	1597
AsuHPI	GGTGA	6 cut(s)	139, 1556, 1712, 2197, 2321, 2324
AsuII	TTCGAA	1 cut(s)	1973
AsuNHI	GCTAGC	1 cut(s)	571
AvaI	CYCGRG	2 cut(s)	297, 1120
AvaII	GGWCC	2 cut(s)	515, 2401
AxyI	CCTNAGG	1 cut(s)	60
BanII	GRGCYC	1 cut(s)	2329
BauI	CACGAG	2 cut(s)	158, 1053
BbrPI	CACGTG	1 cut(s)	1001
BbsI	GAAGAC	2 cut(s)	696, 2232
BbvI	GCAGC	6 cut(s)	99, 1318, 1435, 1582, 2062, 2278
BccI	CCATC	7 cut(s)	224, 465, 749, 1081, 1405, 1505, 1675
BceAI	ACGGC	2 cut(s)	56, 58
BcgI	CGANNNNNNTGC	2 cut(s)	2196, 2230
BciT130I	CCWGG	2 cut(s)	88, 1262
BclI	TGATCA	2 cut(s)	1128, 1564
BcnI	CCSGG	1 cut(s)	1597
BcoDI	GTCTC	9 cut(s)	30, 648, 779, 845, 892, 1002, 1610, 1983, 2424
BcuI	ACTAGT	1 cut(s)	1429
BfaI	CTAG	7 cut(s)	572, 717, 1095, 1142, 1430, 2004, 2021
BfmI	CTRYAG	6 cut(s)	223, 306, 519, 1773, 2372, 2388
BfrI	CTTAAG	1 cut(s)	908
BglI	GCCNNNNNGGC	2 cut(s)	42, 89
BlpI	GCTNAGC	2 cut(s)	966, 2079
BmcAI	AGTACT	2 cut(s)	264, 1304
Bme1390I	CCNGG	3 cut(s)	88, 1262, 1597
Bme18I	GGWCC	2 cut(s)	515, 2401
BmeT110I	CYCGRG	2 cut(s)	297, 1120
BmgT120I	GGNCC	2 cut(s)	515, 2401
BmiI	GGNNCC	4 cut(s)	46, 358, 455, 869
BmrFI	CCNGG	3 cut(s)	88, 1262, 1597
BmrI	ACTGGG	1 cut(s)	866
BmtI	GCTAGC	1 cut(s)	575
BmuI	ACTGGG	1 cut(s)	866
BpiI	GAAGAC	2 cut(s)	696, 2232
BpmI	CTGGAG	1 cut(s)	638
Bpu1102I	GCTNAGC	2 cut(s)	966, 2079
Bpu14I	TTCGAA	1 cut(s)	1973
BpuEI	CTTGAG	5 cut(s)	152, 887, 1883, 2390, 2406
BpuMI	CCSGG	1 cut(s)	1597
BsaAI	YACGTR	2 cut(s)	1001, 2281
BsaHI	GRCGYC	4 cut(s)	69, 105, 273, 2160
BsaI	GGTCTC	1 cut(s)	845
BsaJI	CCNNGG	4 cut(s)	87, 771, 1260, 1755
BsaWI	WCCGGW	1 cut(s)	1993
BsaXI	ACNNNNNCTCC	4 cut(s)	32, 62, 721, 751
Bsc4I	CCNNNNNNNGG	2 cut(s)	87, 1596
Bse118I	RCCGGY	1 cut(s)	179
Bse1I	ACTGG	4 cut(s)	121, 841, 872, 2332
Bse21I	CCTNAGG	1 cut(s)	60
Bse3DI	GCAATG	2 cut(s)	438, 1202
BseAI	TCCGGA	1 cut(s)	1993
BseBI	CCWGG	2 cut(s)	88, 1262
BseDI	CCNNGG	4 cut(s)	87, 771, 1260, 1755
BseGI	GGATG	8 cut(s)	382, 412, 568, 1151, 1181, 1516, 1810, 2077
BseLI	CCNNNNNNNGG	2 cut(s)	87, 1596
BseMI	GCAATG	2 cut(s)	438, 1202
BseMII	CTCAG	6 cut(s)	51, 765, 771, 1847, 2070, 2235
BseNI	ACTGG	4 cut(s)	121, 841, 872, 2332
BseRI	GAGGAG	4 cut(s)	4, 37, 40, 797
BseXI	GCAGC	6 cut(s)	99, 1318, 1435, 1582, 2062, 2278
BseYI	CCCAGC	1 cut(s)	1038
Bsh1236I	CGCG	1 cut(s)	39
BshFI	GGCC	5 cut(s)	5, 179, 1237, 2065, 2219
BsiHKCI	CYCGRG	2 cut(s)	297, 1120
BsiSI	CCGG	3 cut(s)	180, 1597, 1994
BslFI	GGGAC	3 cut(s)	1021, 1440, 1573
BslI	CCNNNNNNNGG	2 cut(s)	87, 1596
BsmAI	GTCTC	9 cut(s)	30, 648, 779, 845, 892, 1002, 1610, 1983, 2424
BsmBI	CGTCTC	1 cut(s)	30
BsmFI	GGGAC	3 cut(s)	1021, 1440, 1573
BsmI	GAATGC	1 cut(s)	1406
BsnI	GGCC	5 cut(s)	5, 179, 1237, 2065, 2219
Bso31I	GGTCTC	1 cut(s)	845
BsoBI	CYCGRG	2 cut(s)	297, 1120
Bsp119I	TTCGAA	1 cut(s)	1973
Bsp1286I	GDGCHC	1 cut(s)	2329
Bsp13I	TCCGGA	1 cut(s)	1993
Bsp143I	GATC	9 cut(s)	136, 184, 241, 856, 1116, 1128, 1564, 2105, 2320
Bsp1720I	GCTNAGC	2 cut(s)	966, 2079
BspACI	CCGC	9 cut(s)	6, 9, 37, 81, 150, 215, 317, 806, 2036
BspANI	GGCC	5 cut(s)	5, 179, 1237, 2065, 2219
BspCNI	CTCAG	6 cut(s)	52, 764, 772, 1846, 2071, 2234
BspEI	TCCGGA	1 cut(s)	1993
BspFNI	CGCG	1 cut(s)	39
BspHI	TCATGA	1 cut(s)	463
BspLI	GGNNCC	4 cut(s)	46, 358, 455, 869
BspMAI	CTGCAG	2 cut(s)	310, 2392
BspOI	GCTAGC	1 cut(s)	575
BspPI	GGATC	4 cut(s)	179, 236, 1124, 2113
BspQI	GCTCTTC	3 cut(s)	282, 1029, 1914
BspT104I	TTCGAA	1 cut(s)	1973
BspTI	CTTAAG	1 cut(s)	908
BspTNI	GGTCTC	1 cut(s)	845
BsrDI	GCAATG	2 cut(s)	438, 1202
BsrFI	RCCGGY	1 cut(s)	179
BsrI	ACTGG	4 cut(s)	121, 841, 872, 2332
BssAI	RCCGGY	1 cut(s)	179
BssECI	CCNNGG	4 cut(s)	87, 771, 1260, 1755
BssMI	GATC	9 cut(s)	136, 184, 241, 856, 1116, 1128, 1564, 2105, 2320
BssNAI	GTATAC	1 cut(s)	1285
BssNI	GRCGYC	4 cut(s)	69, 105, 273, 2160
BssSI	CACGAG	2 cut(s)	158, 1053
BssT1I	CCWWGG	1 cut(s)	771
Bst1107I	GTATAC	1 cut(s)	1285
Bst2BI	CACGAG	2 cut(s)	158, 1053
Bst2UI	CCWGG	2 cut(s)	88, 1262
Bst4CI	ACNGT	4 cut(s)	501, 694, 1292, 2170
Bst6I	CTCTTC	9 cut(s)	282, 895, 1029, 1227, 1863, 1914, 2130, 2175, 2253
BstACI	GRCGYC	4 cut(s)	69, 105, 273, 2160
BstAFI	CTTAAG	1 cut(s)	908
BstAPI	GCANNNNNTGC	1 cut(s)	314
BstBAI	YACGTR	2 cut(s)	1001, 2281
BstBI	TTCGAA	1 cut(s)	1973
BstDEI	CTNAG	9 cut(s)	60, 246, 699, 751, 780, 966, 1833, 2079, 2221
BstF5I	GGATG	8 cut(s)	382, 412, 568, 1151, 1181, 1516, 1810, 2077
BstFNI	CGCG	1 cut(s)	39
BstHHI	GCGC	1 cut(s)	100
BstKTI	GATC	9 cut(s)	139, 187, 244, 859, 1119, 1131, 1567, 2108, 2323
BstMAI	GTCTC	9 cut(s)	30, 648, 779, 845, 892, 1002, 1610, 1983, 2424
BstMBI	GATC	9 cut(s)	136, 184, 241, 856, 1116, 1128, 1564, 2105, 2320
BstNI	CCWGG	2 cut(s)	88, 1262
BstNSI	RCATGY	2 cut(s)	317, 986
BstSCI	CCNGG	3 cut(s)	86, 1260, 1595
BstSFI	CTRYAG	6 cut(s)	223, 306, 519, 1773, 2372, 2388
BstSNI	TACGTA	1 cut(s)	2281
BstUI	CGCG	1 cut(s)	39
BstV1I	GCAGC	6 cut(s)	99, 1318, 1435, 1582, 2062, 2278
BstV2I	GAAGAC	2 cut(s)	696, 2232
BstX2I	RGATCY	3 cut(s)	241, 1116, 2105
BstXI	CCANNNNNNTGG	1 cut(s)	1352
BstYI	RGATCY	3 cut(s)	241, 1116, 2105
BstZ17I	GTATAC	1 cut(s)	1285
Bsu36I	CCTNAGG	1 cut(s)	60
BsuRI	GGCC	5 cut(s)	5, 179, 1237, 2065, 2219
BtgZI	GCGATG	3 cut(s)	39, 979, 2288
BtsCI	GGATG	8 cut(s)	382, 412, 568, 1151, 1181, 1516, 1810, 2077
BtsI	GCAGTG	1 cut(s)	1607
BtsIMutI	CAGTG	3 cut(s)	146, 497, 1607
CaiI	CAGNNNCTG	1 cut(s)	2204
CciI	TCATGA	1 cut(s)	463
CfoI	GCGC	1 cut(s)	100
Cfr10I	RCCGGY	1 cut(s)	179
Cfr13I	GGNCC	2 cut(s)	515, 2401
CseI	GACGC	5 cut(s)	12, 77, 113, 922, 2149
Csp6I	GTAC	7 cut(s)	263, 372, 1303, 1621, 2278, 2299, 2360
CviQI	GTAC	7 cut(s)	263, 372, 1303, 1621, 2278, 2299, 2360
DdeI	CTNAG	9 cut(s)	60, 246, 699, 751, 780, 966, 1833, 2079, 2221
DpnI	GATC	9 cut(s)	138, 186, 243, 858, 1118, 1130, 1566, 2107, 2322
DpnII	GATC	9 cut(s)	136, 184, 241, 856, 1116, 1128, 1564, 2105, 2320
DrdI	GACNNNNNNGTC	2 cut(s)	884, 2098
DseDI	GACNNNNNNGTC	2 cut(s)	884, 2098
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	9 cut(s)	282, 895, 1029, 1227, 1863, 1914, 2130, 2175, 2253
EarI	CTCTTC	9 cut(s)	282, 895, 1029, 1227, 1863, 1914, 2130, 2175, 2253
EciI	GGCGGA	1 cut(s)	70
Eco105I	TACGTA	1 cut(s)	2281
Eco130I	CCWWGG	1 cut(s)	771
Eco147I	AGGCCT	1 cut(s)	1237
Eco24I	GRGCYC	1 cut(s)	2329
Eco31I	GGTCTC	1 cut(s)	845
Eco47I	GGWCC	2 cut(s)	515, 2401
Eco72I	CACGTG	1 cut(s)	1001
Eco81I	CCTNAGG	1 cut(s)	60
Eco88I	CYCGRG	2 cut(s)	297, 1120
EcoO109I	RGGNCCY	1 cut(s)	515
EcoRI	GAATTC	3 cut(s)	218, 1657, 1720
EcoRII	CCWGG	2 cut(s)	86, 1260
EcoT14I	CCWWGG	1 cut(s)	771
EcoT22I	ATGCAT	2 cut(s)	1151, 1204
EcoT38I	GRGCYC	1 cut(s)	2329
ErhI	CCWWGG	1 cut(s)	771
Esp3I	CGTCTC	1 cut(s)	30
FalI	AAGNNNNNCTT	8 cut(s)	1896, 1928, 1967, 1999, 2250, 2282, 2415, 2447
FaqI	GGGAC	3 cut(s)	1021, 1440, 1573
FbaI	TGATCA	2 cut(s)	1128, 1564
FblI	GTMKAC	1 cut(s)	1284
FokI	GGATG	8 cut(s)	369, 419, 575, 1158, 1168, 1523, 1817, 2084
FriOI	GRGCYC	1 cut(s)	2329
FspBI	CTAG	7 cut(s)	572, 717, 1095, 1142, 1430, 2004, 2021
FspI	TGCGCA	1 cut(s)	99
GlaI	GCGC	1 cut(s)	99
GsaI	CCCAGC	1 cut(s)	1042
GsuI	CTGGAG	1 cut(s)	638
HaeIII	GGCC	5 cut(s)	5, 179, 1237, 2065, 2219
HapII	CCGG	3 cut(s)	180, 1597, 1994
HgaI	GACGC	5 cut(s)	12, 77, 113, 922, 2149
HhaI	GCGC	1 cut(s)	100
Hin1I	GRCGYC	4 cut(s)	69, 105, 273, 2160
Hin6I	GCGC	1 cut(s)	98
HinP1I	GCGC	1 cut(s)	98
HincII	GTYRAC	3 cut(s)	877, 1251, 2091
HindII	GTYRAC	3 cut(s)	877, 1251, 2091
HindIII	AAGCTT	4 cut(s)	905, 2236, 2408, 2493
HinfI	GANTC	9 cut(s)	320, 646, 749, 776, 1243, 1441, 1640, 1751, 1873
HpaII	CCGG	3 cut(s)	180, 1597, 1994
HphI	GGTGA	6 cut(s)	139, 1556, 1712, 2197, 2321, 2324
Hpy166II	GTNNAC	7 cut(s)	877, 991, 1251, 1285, 2091, 2315, 2401
Hpy8I	GTNNAC	7 cut(s)	877, 991, 1251, 1285, 2091, 2315, 2401
Hpy99I	CGWCG	2 cut(s)	44, 71
HpyAV	CCTTC	7 cut(s)	169, 560, 1222, 1417, 1813, 2223, 2477
HpyCH4III	ACNGT	4 cut(s)	501, 694, 1292, 2170
HpyCH4IV	ACGT	3 cut(s)	273, 1000, 2280
HpyF3I	CTNAG	9 cut(s)	60, 246, 699, 751, 780, 966, 1833, 2079, 2221
HpySE526I	ACGT	3 cut(s)	273, 1000, 2280
Hsp92I	GRCGYC	4 cut(s)	69, 105, 273, 2160
HspAI	GCGC	1 cut(s)	98
Kpn2I	TCCGGA	1 cut(s)	1993
KroI	GCCGGC	1 cut(s)	179
KroNI	GCCGGC	1 cut(s)	181
Ksp22I	TGATCA	2 cut(s)	1128, 1564
Kzo9I	GATC	9 cut(s)	136, 184, 241, 856, 1116, 1128, 1564, 2105, 2320
LguI	GCTCTTC	3 cut(s)	282, 1029, 1914
LmnI	GCTCC	4 cut(s)	50, 742, 1837, 2270
Lsp1109I	GCAGC	6 cut(s)	99, 1318, 1435, 1582, 2062, 2278
MaeI	CTAG	7 cut(s)	572, 717, 1095, 1142, 1430, 2004, 2021
MaeII	ACGT	3 cut(s)	273, 1000, 2280
MaeIII	GTNAC	1 cut(s)	727
MalI	GATC	9 cut(s)	138, 186, 243, 858, 1118, 1130, 1566, 2107, 2322
MboI	GATC	9 cut(s)	136, 184, 241, 856, 1116, 1128, 1564, 2105, 2320
MfeI	CAATTG	1 cut(s)	2150
MflI	RGATCY	3 cut(s)	241, 1116, 2105
MhlI	GDGCHC	1 cut(s)	2329
MlyI	GAGTC	3 cut(s)	329, 743, 1450
MmeI	TCCRAC	2 cut(s)	1749, 1917
Mph1103I	ATGCAT	2 cut(s)	1151, 1204
MroI	TCCGGA	1 cut(s)	1993
MroNI	GCCGGC	1 cut(s)	179
MroXI	GAANNNNTTC	1 cut(s)	1872
MseI	TTAA	7 cut(s)	434, 608, 909, 956, 1209, 2234, 2480
MslI	CAYNNNNRTG	3 cut(s)	462, 468, 2031
MspA1I	CMGCKG	1 cut(s)	1448
MspCI	CTTAAG	1 cut(s)	908
MspI	CCGG	3 cut(s)	180, 1597, 1994
MspR9I	CCNGG	3 cut(s)	88, 1262, 1597
MunI	CAATTG	1 cut(s)	2150
Mva1269I	GAATGC	1 cut(s)	1406
MvaI	CCWGG	2 cut(s)	88, 1262
MvnI	CGCG	1 cut(s)	39
NaeI	GCCGGC	1 cut(s)	181
NciI	CCSGG	1 cut(s)	1597
NdeII	GATC	9 cut(s)	136, 184, 241, 856, 1116, 1128, 1564, 2105, 2320
NgoMIV	GCCGGC	1 cut(s)	179
NheI	GCTAGC	1 cut(s)	571
NlaIV	GGNNCC	4 cut(s)	46, 358, 455, 869
NmuCI	GTSAC	1 cut(s)	727
NsbI	TGCGCA	1 cut(s)	99
NsiI	ATGCAT	2 cut(s)	1151, 1204
NspI	RCATGY	2 cut(s)	317, 986
NspV	TTCGAA	1 cut(s)	1973
PaeI	GCATGC	1 cut(s)	986
PaeR7I	CTCGAG	2 cut(s)	297, 1120
PagI	TCATGA	1 cut(s)	463
PceI	AGGCCT	1 cut(s)	1237
PciSI	GCTCTTC	3 cut(s)	282, 1029, 1914
PcsI	WCGNNNNNNNCGW	1 cut(s)	2452
PctI	GAATGC	1 cut(s)	1406
PdiI	GCCGGC	1 cut(s)	181
PdmI	GAANNNNTTC	1 cut(s)	1872
PfeI	GAWTC	6 cut(s)	646, 776, 1243, 1640, 1751, 1873
PleI	GAGTC	3 cut(s)	328, 743, 1449
PmaCI	CACGTG	1 cut(s)	1001
PmlI	CACGTG	1 cut(s)	1001
PpsI	GAGTC	3 cut(s)	328, 743, 1449
Ppu21I	YACGTR	2 cut(s)	1001, 2281
PpuMI	RGGWCCY	1 cut(s)	515
Psp5II	RGGWCCY	1 cut(s)	515
Psp6I	CCWGG	2 cut(s)	86, 1260
PspCI	CACGTG	1 cut(s)	1001
PspFI	CCCAGC	1 cut(s)	1038
PspGI	CCWGG	2 cut(s)	86, 1260
PspN4I	GGNNCC	4 cut(s)	46, 358, 455, 869
PspPI	GGNCC	2 cut(s)	515, 2401
PspPPI	RGGWCCY	1 cut(s)	515
PspXI	VCTCGAGB	1 cut(s)	297
PstI	CTGCAG	2 cut(s)	310, 2392
PstNI	CAGNNNCTG	1 cut(s)	2204
PsuI	RGATCY	3 cut(s)	241, 1116, 2105
PvuII	CAGCTG	1 cut(s)	1448
RsaI	GTAC	7 cut(s)	264, 373, 1304, 1622, 2279, 2300, 2361
RsaNI	GTAC	7 cut(s)	263, 372, 1303, 1621, 2278, 2299, 2360
RseI	CAYNNNNRTG	3 cut(s)	462, 468, 2031
SapI	GCTCTTC	3 cut(s)	282, 1029, 1914
SaqAI	TTAA	7 cut(s)	434, 608, 909, 956, 1209, 2234, 2480
Sau3AI	GATC	9 cut(s)	136, 184, 241, 856, 1116, 1128, 1564, 2105, 2320
Sau96I	GGNCC	2 cut(s)	515, 2401
ScaI	AGTACT	2 cut(s)	264, 1304
SchI	GAGTC	3 cut(s)	329, 743, 1450
ScrFI	CCNGG	3 cut(s)	88, 1262, 1597
SduI	GDGCHC	1 cut(s)	2329
SfcI	CTRYAG	6 cut(s)	223, 306, 519, 1773, 2372, 2388
Sfr274I	CTCGAG	2 cut(s)	297, 1120
SfuI	TTCGAA	1 cut(s)	1973
SinI	GGWCC	2 cut(s)	515, 2401
SlaI	CTCGAG	2 cut(s)	297, 1120
SmiMI	CAYNNNNRTG	3 cut(s)	462, 468, 2031
SmlI	CTYRAG	8 cut(s)	167, 297, 902, 908, 1120, 1898, 2405, 2421
SmoI	CTYRAG	8 cut(s)	167, 297, 902, 908, 1120, 1898, 2405, 2421
SnaBI	TACGTA	1 cut(s)	2281
SpeI	ACTAGT	1 cut(s)	1429
SphI	GCATGC	1 cut(s)	986
SseBI	AGGCCT	1 cut(s)	1237
SsiI	CCGC	9 cut(s)	6, 9, 37, 81, 150, 215, 317, 806, 2036
SspI	AATATT	3 cut(s)	195, 205, 544
SspMI	CTAG	7 cut(s)	572, 717, 1095, 1142, 1430, 2004, 2021
StuI	AGGCCT	1 cut(s)	1237
StyD4I	CCNGG	3 cut(s)	86, 1260, 1595
StyI	CCWWGG	1 cut(s)	771
TaaI	ACNGT	4 cut(s)	501, 694, 1292, 2170
TaiI	ACGT	3 cut(s)	276, 1003, 2283
TaqI	TCGA	9 cut(s)	135, 298, 813, 863, 931, 1121, 1372, 1973, 2455
TatI	WGTACW	4 cut(s)	262, 371, 1302, 1620
TauI	GCSGC	4 cut(s)	8, 11, 39, 2039
TfiI	GAWTC	6 cut(s)	646, 776, 1243, 1640, 1751, 1873
Tru1I	TTAA	7 cut(s)	434, 608, 909, 956, 1209, 2234, 2480
Tru9I	TTAA	7 cut(s)	434, 608, 909, 956, 1209, 2234, 2480
TscAI	CASTG	3 cut(s)	146, 504, 1607
TseFI	GTSAC	1 cut(s)	727
TseI	GCWGC	6 cut(s)	112, 1331, 1448, 1570, 2075, 2291
Tsp45I	GTSAC	1 cut(s)	727
TspGWI	ACGGA	2 cut(s)	1174, 2147
TspRI	CASTG	3 cut(s)	146, 504, 1607
Vha464I	CTTAAG	1 cut(s)	908
VpaK11BI	GGWCC	2 cut(s)	515, 2401
XapI	RAATTY	7 cut(s)	218, 410, 1657, 1720, 1989, 2007, 2284
XbaI	TCTAGA	1 cut(s)	2003
XceI	RCATGY	2 cut(s)	317, 986
XhoI	CTCGAG	2 cut(s)	297, 1120
XmiI	GTMKAC	1 cut(s)	1284
XmnI	GAANNNNTTC	1 cut(s)	1872
XspI	CTAG	7 cut(s)	572, 717, 1095, 1142, 1430, 2004, 2021
ZraI	GACGTC	1 cut(s)	274
ZrmI	AGTACT	2 cut(s)	264, 1304
Zsp2I	ATGCAT	2 cut(s)	1151, 1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.