FvH4_1g13300

Pyridine nucleotide-disulfide oxidoreductase domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0011262
Physical Location & Seq
Forward (+)
7291038 .. 7295552
4515 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g13300.t1

Sequence Viewer

Length: 1704 bp
ATGTGGCGGAGGAGCTTCAGTAGTGACGGCACCGCCGCAACCGCGTTGAAGGACAAGAAATGGGACGCGCTGGTGATCGGAGGCGGCCACAACGGCCTCACCGCAGCCACGTACCTCGCACGCGGCGGACTCTCCGTCGCCGTCCTCGAACGCCGCCACGTCATCGGCGGCGCCGCCGTGACGGAGGAGCTCATTCCAGGGTTCAAGTTCTCCCGGTGTAGCTACCTCCAGAGCCTCCTCCGTCCCACCATTATCAAAGAATTGGAGCTAGCTCGGCACGGGATGAAGTTGCTGAAGCGGAGTCCGTCGTCGTTTACGCCGTGTTTGGACGGACGTTATCTTCTTCTAGGGCAGGACAAGGATCTCAACCATTCGGAGATCGCTAAATTCTCCAAGCTAGACGCCGAAGCTTATCCGAGATATGAGAATCAGCTACAGAAGTATTGTGAGTTTATGGATCCTTTGCTGGATTTAGCTCCTCCAGAATCTTCGCAAGGCGCCTCATCGGCTACGTTTGGTGACCGGTTGAAGGATAAGATGCACAAGTCCATGTTCTGGGGTCAGCTTTTGAGACAGGCTGCTGTGTTAGGCCAGAAGGATATGGTAGACTTTATGGACCTTCTGTTATCCCCGGCCTCGAAGGTTTTGAACAACTGGTTTGAGAGTGATGTTCTGAAGGCAACCCTCGGAACAGATGCTGTAATAGGAGCTATGGGAAGTGTCCATACACCTGGTAGTGGATATGTTCTGCTACATCATGTGATGGGAGAAACTGGCGGTGAGCGTGGAATTTGGTCGTATGTTGAAGGTGGGATGGGATCAGTATCCTTGGCTATTGGTAATGCTGCTAGGGAAGCTGGAGTTCATATTGTCACAAGTGCGGAGGTTCAGCAAATGTTGGTTAATGACTCTGGCAAAGTGGAGGGGGTTTTGCTATCTGATGGTTCACGGGTGCACTCCTCAATTGTTTTATCAAATGCAACGCCTTATAAAACATTCAAGGAGTTGGTGCCTGATGACGCTCTTCCGGATGATTTTCTACGAGCAATTAAGTATTCTGATTACAGCTCTGCTACTACAAAGATAAATATAGCAGTTGATCAGTTGCCCCAGTTCAAGAGCTGCAAGCTAAGTTATCCTAACGCAGGTCCTCAGCATATGGGCACCATTCACATTGGTACCGAGAGTATGGAAGAGATTCACTCGGCCTATCAAGATGCAGTTAATGGATTACCATCACAAAGACCAGTTATAGAGATGACAATTCCCTCTGCACTGGACAAAACTATATCTCCACCTGGTAAGCATGTGATCAACTTGTTCATTCAATACACTCCATACAGTCCATCAGATGGACACTGGGGAGATCATGTATACAGAGAATCTTTTGCAAAAAAGTGTTTCGCCTTAATTGATGAATACGCCCCTGGCTTCAGTTCATCAGTAATTGGTTACGACATGTTGACTCCCCCAGACCTTGAAAGGGAAATCGGTTTGACAGGAGGAAATATCTTCCATGGTGCTATGGGATTGGATTCACTCTTCCTCATGCGACCTGTAAAAGGATGGTCAAATTATAGAACACCACTGGCGGGTCTATATTTGTGCGGTAGCGGGGCACACCCTGGGGGCGGTGTGATGGGGGCTTCTGGGCGTAATGCTGCTCGTGTGGCTCTTGAAGATGTAAACAAGCCATTGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Amino_oxidase DAO NAD_binding_8

Protein Analysis

568

Amino Acids

61.49

Weight (kDa)

6.42

Isoelectric Point (pI)

38.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAO PF01266 22 - 58 4.8e-07 FAD dependent oxidoreductase
FAD_oxidored PF12831 22 - 62 7e-07 FAD dependent oxidoreductase
NAD_binding_8 PF13450 25 - 72 7e-10 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 32 - 368 2.2e-11 Flavin containing amine oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 990
Acc36I ACCTGC 1 cut(s) 1136
Acc65I GGTACC 1 cut(s) 1178
AccB1I GGYRCC 6 cut(s) 29, 170, 497, 1009, 1163, 1178
AccB7I CCANNNNNTGG 2 cut(s) 555, 1352
AccI GTMKAC 2 cut(s) 606, 1374
AccII CGCG 3 cut(s) 44, 68, 123
AccIII TCCGGA 1 cut(s) 1027
AclWI GGATC 4 cut(s) 369, 452, 465, 826
AcoI YGGCCR 1 cut(s) 85
AcsI RAATTY 2 cut(s) 386, 789
AcuI CTGAAG 3 cut(s) 314, 695, 1417
AcyI GRCGYC 3 cut(s) 171, 402, 498
AfaI GTAC 2 cut(s) 113, 1180
AfiI CCNNNNNNNGG 9 cut(s) 529, 555, 737, 1145, 1352, 1483, 1562, 1592, 1631
AflIII ACRYGT 1 cut(s) 1458
AgeI ACCGGT 1 cut(s) 522
AhdI GACNNNNNGTC 1 cut(s) 134
AjiI CACGTC 1 cut(s) 160
AjnI CCWGG 5 cut(s) 196, 730, 1297, 1426, 1624
Alw21I GWGCWC 2 cut(s) 192, 957
Alw26I GTCTC 1 cut(s) 565
Alw44I GTGCAC 1 cut(s) 953
AlwI GGATC 4 cut(s) 369, 452, 465, 826
AlwNI CAGNNNCTG 1 cut(s) 698
Aor13HI TCCGGA 1 cut(s) 1027
AoxI GGCC 5 cut(s) 85, 94, 589, 633, 1206
ApaLI GTGCAC 1 cut(s) 953
ApeKI GCWGC 5 cut(s) 104, 578, 845, 1122, 1661
ApoI RAATTY 2 cut(s) 386, 789
AsiGI ACCGGT 1 cut(s) 522
Asp700I GAANNNNTTC 1 cut(s) 1197
Asp718I GGTACC 1 cut(s) 1178
AspLEI GCGC 3 cut(s) 70, 173, 500
AspS9I GGNCC 2 cut(s) 616, 1148
AsuC2I CCSGG 2 cut(s) 214, 632
AsuHPI GGTGA 4 cut(s) 85, 91, 530, 791
AsuNHI GCTAGC 1 cut(s) 268
AvaII GGWCC 2 cut(s) 616, 1148
BaeGI GKGCMC 3 cut(s) 957, 1166, 1621
BaeI ACNNNNGTAYC 2 cut(s) 1162, 1195
BamHI GGATCC 1 cut(s) 457
BanI GGYRCC 6 cut(s) 29, 170, 497, 1009, 1163, 1178
BanII GRGCYC 1 cut(s) 192
BarI GAAGNNNNNNTAC 2 cut(s) 709, 741
BauI CACGAG 1 cut(s) 1665
Bbv12I GWGCWC 2 cut(s) 192, 957
BbvCI CCTCAGC 1 cut(s) 1152
BbvI GCAGC 5 cut(s) 116, 565, 832, 1109, 1648
BccI CCATC 8 cut(s) 757, 808, 935, 1243, 1346, 1354, 1560, 1633
BceAI ACGGC 5 cut(s) 43, 109, 125, 161, 304
BciT130I CCWGG 5 cut(s) 198, 732, 1299, 1428, 1626
BciVI GTATCC 1 cut(s) 835
BclI TGATCA 2 cut(s) 1099, 1311
BcnI CCSGG 2 cut(s) 214, 632
BcoDI GTCTC 1 cut(s) 565
BfaI CTAG 4 cut(s) 269, 347, 398, 849
BfmI CTRYAG 1 cut(s) 434
BfoI RGCGCY 2 cut(s) 174, 501
BfuAI ACCTGC 1 cut(s) 1136
BfuI GTATCC 1 cut(s) 835
BglI GCCNNNNNGGC 2 cut(s) 93, 506
Bme1390I CCNGG 7 cut(s) 198, 214, 632, 732, 1299, 1428, 1626
Bme18I GGWCC 2 cut(s) 616, 1148
BmeRI GACNNNNNGTC 1 cut(s) 134
BmgBI CACGTC 1 cut(s) 160
BmgT120I GGNCC 2 cut(s) 616, 1148
BmiI GGNNCC 7 cut(s) 31, 172, 459, 499, 1011, 1165, 1180
BmrFI CCNGG 7 cut(s) 198, 214, 632, 732, 1299, 1428, 1626
BmrI ACTGGG 2 cut(s) 1105, 1369
BmsI GCATC 3 cut(s) 528, 685, 1207
BmtI GCTAGC 1 cut(s) 272
BmuI ACTGGG 2 cut(s) 1105, 1369
BplI GAGNNNNNCTC 2 cut(s) 1187, 1219
BpmI CTGGAG 3 cut(s) 212, 465, 879
Bpu10I CCTNAGC 1 cut(s) 1152
BpuMI CCSGG 2 cut(s) 214, 632
BsaAI YACGTR 1 cut(s) 111
BsaBI GATNNNNATC 2 cut(s) 823, 1234
BsaHI GRCGYC 3 cut(s) 171, 402, 498
BsaJI CCNNGG 8 cut(s) 197, 630, 685, 828, 1426, 1516, 1624, 1625
BsaWI WCCGGW 2 cut(s) 522, 1027
BsaXI ACNNNNNCTCC 5 cut(s) 34, 1276, 1306, 1356, 1386
Bsc4I CCNNNNNNNGG 9 cut(s) 529, 555, 737, 1145, 1352, 1483, 1562, 1592, 1631
Bse118I RCCGGY 1 cut(s) 522
Bse1I ACTGG 7 cut(s) 659, 778, 1111, 1247, 1281, 1364, 1593
Bse8I GATNNNNATC 2 cut(s) 823, 1234
BseAI TCCGGA 1 cut(s) 1027
BseBI CCWGG 5 cut(s) 198, 732, 1299, 1428, 1626
BseDI CCNNGG 8 cut(s) 197, 630, 685, 828, 1426, 1516, 1624, 1625
BseGI GGATG 4 cut(s) 288, 819, 1036, 1571
BseJI GATNNNNATC 2 cut(s) 823, 1234
BseLI CCNNNNNNNGG 9 cut(s) 529, 555, 737, 1145, 1352, 1483, 1562, 1592, 1631
BseMII CTCAG 1 cut(s) 1166
BseNI ACTGG 7 cut(s) 659, 778, 1111, 1247, 1281, 1364, 1593
BseRI GAGGAG 5 cut(s) 25, 200, 227, 468, 949
BseSI GKGCMC 3 cut(s) 957, 1166, 1621
BseXI GCAGC 5 cut(s) 116, 565, 832, 1109, 1648
BsgI GTGCAG 1 cut(s) 1257
Bsh1236I CGCG 3 cut(s) 44, 68, 123
BshFI GGCC 5 cut(s) 87, 96, 591, 635, 1208
BshNI GGYRCC 6 cut(s) 29, 170, 497, 1009, 1163, 1178
BshTI ACCGGT 1 cut(s) 522
BsiHKAI GWGCWC 2 cut(s) 192, 957
BsiSI CCGG 4 cut(s) 214, 523, 632, 1028
BslFI GGGAC 2 cut(s) 77, 228
BslI CCNNNNNNNGG 9 cut(s) 529, 555, 737, 1145, 1352, 1483, 1562, 1592, 1631
BsmAI GTCTC 1 cut(s) 565
BsmFI GGGAC 2 cut(s) 77, 228
BsnI GGCC 5 cut(s) 87, 96, 591, 635, 1208
Bsp1286I GDGCHC 4 cut(s) 192, 957, 1166, 1621
Bsp13I TCCGGA 1 cut(s) 1027
Bsp143I GATC 8 cut(s) 75, 361, 378, 457, 818, 1099, 1311, 1366
Bsp19I CCATGG 1 cut(s) 1516
BspANI GGCC 5 cut(s) 87, 96, 591, 635, 1208
BspCNI CTCAG 1 cut(s) 1165
BspEI TCCGGA 1 cut(s) 1027
BspFNI CGCG 3 cut(s) 44, 68, 123
BspLI GGNNCC 7 cut(s) 31, 172, 459, 499, 1011, 1165, 1180
BspMI ACCTGC 1 cut(s) 1136
BspOI GCTAGC 1 cut(s) 272
BspPI GGATC 4 cut(s) 369, 452, 465, 826
BspQI GCTCTTC 1 cut(s) 1029
BspT107I GGYRCC 6 cut(s) 29, 170, 497, 1009, 1163, 1178
BsrFI RCCGGY 1 cut(s) 522
BsrI ACTGG 7 cut(s) 659, 778, 1111, 1247, 1281, 1364, 1593
BssAI RCCGGY 1 cut(s) 522
BssECI CCNNGG 8 cut(s) 197, 630, 685, 828, 1426, 1516, 1624, 1625
BssMI GATC 8 cut(s) 75, 361, 378, 457, 818, 1099, 1311, 1366
BssNAI GTATAC 1 cut(s) 1375
BssNI GRCGYC 3 cut(s) 171, 402, 498
BssSI CACGAG 1 cut(s) 1665
BssT1I CCWWGG 2 cut(s) 828, 1516
Bst1107I GTATAC 1 cut(s) 1375
Bst2BI CACGAG 1 cut(s) 1665
Bst2UI CCWGG 5 cut(s) 198, 732, 1299, 1428, 1626
Bst4CI ACNGT 1 cut(s) 1343
Bst6I CTCTTC 3 cut(s) 1029, 1188, 1547
BstACI GRCGYC 3 cut(s) 171, 402, 498
BstBAI YACGTR 1 cut(s) 111
BstC8I GCNNGC 3 cut(s) 121, 270, 1127
BstDEI CTNAG 2 cut(s) 1130, 1152
BstDSI CCRYGG 1 cut(s) 1516
BstEII GGTNACC 1 cut(s) 518
BstENI CCTNNNNNAGG 2 cut(s) 1143, 1560
BstF5I GGATG 4 cut(s) 288, 819, 1036, 1571
BstFNI CGCG 3 cut(s) 44, 68, 123
BstH2I RGCGCY 2 cut(s) 174, 501
BstHHI GCGC 3 cut(s) 70, 173, 500
BstKTI GATC 8 cut(s) 78, 364, 381, 460, 821, 1102, 1314, 1369
BstMAI GTCTC 1 cut(s) 565
BstMBI GATC 8 cut(s) 75, 361, 378, 457, 818, 1099, 1311, 1366
BstMWI GCNNNNNNNGC 6 cut(s) 41, 93, 274, 506, 854, 1670
BstNI CCWGG 5 cut(s) 198, 732, 1299, 1428, 1626
BstNSI RCATGY 2 cut(s) 1310, 1462
BstPI GGTNACC 1 cut(s) 518
BstSCI CCNGG 7 cut(s) 196, 212, 630, 730, 1297, 1426, 1624
BstSFI CTRYAG 1 cut(s) 434
BstSLI GKGCMC 3 cut(s) 957, 1166, 1621
BstUI CGCG 3 cut(s) 44, 68, 123
BstV1I GCAGC 5 cut(s) 116, 565, 832, 1109, 1648
BstX2I RGATCY 2 cut(s) 361, 457
BstXI CCANNNNNNTGG 1 cut(s) 731
BstYI RGATCY 2 cut(s) 361, 457
BstZ17I GTATAC 1 cut(s) 1375
BsuI GTATCC 1 cut(s) 835
BsuRI GGCC 5 cut(s) 87, 96, 591, 635, 1208
BtgI CCRYGG 1 cut(s) 1516
BtrI CACGTC 1 cut(s) 160
BtsCI GGATG 4 cut(s) 288, 819, 1036, 1571
BtsIMutI CAGTG 3 cut(s) 1274, 1357, 1586
BveI ACCTGC 1 cut(s) 1136
Cac8I GCNNGC 3 cut(s) 121, 270, 1127
CaiI CAGNNNCTG 1 cut(s) 698
CfoI GCGC 3 cut(s) 70, 173, 500
Cfr10I RCCGGY 1 cut(s) 522
Cfr13I GGNCC 2 cut(s) 616, 1148
CseI GACGC 3 cut(s) 74, 410, 1028
CsiI ACCWGGT 2 cut(s) 730, 1297
Csp6I GTAC 2 cut(s) 112, 1179
CspAI ACCGGT 1 cut(s) 522
CviAII CATG 7 cut(s) 550, 758, 1307, 1370, 1459, 1517, 1549
CviQI GTAC 2 cut(s) 112, 1179
DdeI CTNAG 2 cut(s) 1130, 1152
DinI GGCGCC 2 cut(s) 172, 499
DpnI GATC 8 cut(s) 77, 363, 380, 459, 820, 1101, 1313, 1368
DpnII GATC 8 cut(s) 75, 361, 378, 457, 818, 1099, 1311, 1366
DriI GACNNNNNGTC 1 cut(s) 134
EaeI YGGCCR 1 cut(s) 85
Eam1104I CTCTTC 3 cut(s) 1029, 1188, 1547
Eam1105I GACNNNNNGTC 1 cut(s) 134
EarI CTCTTC 3 cut(s) 1029, 1188, 1547
EciI GGCGGA 2 cut(s) 22, 141
Ecl136II GAGCTC 1 cut(s) 190
Eco130I CCWWGG 2 cut(s) 828, 1516
Eco24I GRGCYC 1 cut(s) 192
Eco47I GGWCC 2 cut(s) 616, 1148
Eco53kI GAGCTC 1 cut(s) 190
Eco57I CTGAAG 3 cut(s) 314, 695, 1417
Eco91I GGTNACC 1 cut(s) 518
EcoICRI GAGCTC 1 cut(s) 190
EcoNI CCTNNNNNAGG 2 cut(s) 1143, 1560
EcoO109I RGGNCCY 1 cut(s) 1148
EcoO65I GGTNACC 1 cut(s) 518
EcoRII CCWGG 5 cut(s) 196, 730, 1297, 1426, 1624
EcoT14I CCWWGG 2 cut(s) 828, 1516
EcoT38I GRGCYC 1 cut(s) 192
EgeI GGCGCC 2 cut(s) 172, 499
EheI GGCGCC 2 cut(s) 172, 499
ErhI CCWWGG 2 cut(s) 828, 1516
FaeI CATG 7 cut(s) 553, 761, 1310, 1373, 1462, 1520, 1552
FaqI GGGAC 2 cut(s) 77, 228
FatI CATG 7 cut(s) 549, 757, 1306, 1369, 1458, 1516, 1548
FauI CCCGC 2 cut(s) 1585, 1607
FauNDI CATATG 1 cut(s) 1158
FbaI TGATCA 2 cut(s) 1099, 1311
FblI GTMKAC 2 cut(s) 606, 1374
FokI GGATG 4 cut(s) 295, 826, 1043, 1578
FriOI GRGCYC 1 cut(s) 192
FspBI CTAG 4 cut(s) 269, 347, 398, 849
GlaI GCGC 3 cut(s) 69, 172, 499
GsuI CTGGAG 3 cut(s) 212, 465, 879
HaeII RGCGCY 2 cut(s) 174, 501
HaeIII GGCC 5 cut(s) 87, 96, 591, 635, 1208
HapII CCGG 4 cut(s) 214, 523, 632, 1028
HgaI GACGC 3 cut(s) 74, 410, 1028
HhaI GCGC 3 cut(s) 70, 173, 500
Hin1I GRCGYC 3 cut(s) 171, 402, 498
Hin1II CATG 7 cut(s) 553, 761, 1310, 1373, 1462, 1520, 1552
Hin6I GCGC 3 cut(s) 68, 171, 498
HinP1I GCGC 3 cut(s) 68, 171, 498
HincII GTYRAC 1 cut(s) 1464
HindII GTYRAC 1 cut(s) 1464
HindIII AAGCTT 1 cut(s) 408
HinfI GANTC 9 cut(s) 129, 301, 427, 485, 908, 1198, 1382, 1465, 1535
HpaII CCGG 4 cut(s) 214, 523, 632, 1028
HphI GGTGA 4 cut(s) 85, 91, 530, 791
Hpy166II GTNNAC 7 cut(s) 315, 607, 947, 955, 1375, 1464, 1687
Hpy188I TCNGA 8 cut(s) 80, 376, 417, 675, 689, 940, 1060, 1351
Hpy188III TCNNGA 6 cut(s) 229, 482, 1028, 1117, 1214, 1676
Hpy8I GTNNAC 7 cut(s) 315, 607, 947, 955, 1375, 1464, 1687
Hpy99I CGWCG 3 cut(s) 140, 310, 313
HpyAV CCTTC 7 cut(s) 43, 523, 589, 629, 634, 670, 800
HpyCH4III ACNGT 1 cut(s) 1343
HpyCH4IV ACGT 4 cut(s) 110, 159, 334, 512
HpyCH4V TGCA 7 cut(s) 541, 955, 980, 1125, 1220, 1274, 1391
HpyF10VI GCNNNNNNNGC 6 cut(s) 41, 93, 274, 506, 854, 1670
HpyF3I CTNAG 2 cut(s) 1130, 1152
HpySE526I ACGT 4 cut(s) 110, 159, 334, 512
Hsp92I GRCGYC 3 cut(s) 171, 402, 498
Hsp92II CATG 7 cut(s) 553, 761, 1310, 1373, 1462, 1520, 1552
HspAI GCGC 3 cut(s) 68, 171, 498
KasI GGCGCC 2 cut(s) 170, 497
Kpn2I TCCGGA 1 cut(s) 1027
KpnI GGTACC 1 cut(s) 1182
Ksp22I TGATCA 2 cut(s) 1099, 1311
Kzo9I GATC 8 cut(s) 75, 361, 378, 457, 818, 1099, 1311, 1366
LguI GCTCTTC 1 cut(s) 1029
LmnI GCTCC 5 cut(s) 12, 187, 265, 481, 707
Lsp1109I GCAGC 5 cut(s) 116, 565, 832, 1109, 1648
LweI GCATC 3 cut(s) 528, 685, 1207
MabI ACCWGGT 2 cut(s) 730, 1297
MaeI CTAG 4 cut(s) 269, 347, 398, 849
MaeII ACGT 4 cut(s) 110, 159, 334, 512
MaeIII GTNAC 5 cut(s) 23, 178, 518, 871, 1451
MalI GATC 8 cut(s) 77, 363, 380, 459, 820, 1101, 1313, 1368
MboI GATC 8 cut(s) 75, 361, 378, 457, 818, 1099, 1311, 1366
MboII GAAGA 8 cut(s) 332, 335, 480, 1016, 1205, 1504, 1534, 1691
MfeI CAATTG 1 cut(s) 963
MflI RGATCY 2 cut(s) 361, 457
MhlI GDGCHC 4 cut(s) 192, 957, 1166, 1621
MluCI AATT 9 cut(s) 260, 386, 789, 963, 1047, 1263, 1410, 1446, 1573
Mly113I GGCGCC 2 cut(s) 171, 498
MlyI GAGTC 4 cut(s) 123, 310, 902, 1459
MroI TCCGGA 1 cut(s) 1027
MroXI GAANNNNTTC 1 cut(s) 1197
MseI TTAA 4 cut(s) 903, 1050, 1224, 1409
MslI CAYNNNNRTG 1 cut(s) 1699
MspI CCGG 4 cut(s) 214, 523, 632, 1028
MspR9I CCNGG 7 cut(s) 198, 214, 632, 732, 1299, 1428, 1626
MunI CAATTG 1 cut(s) 963
MvaI CCWGG 5 cut(s) 198, 732, 1299, 1428, 1626
MvnI CGCG 3 cut(s) 44, 68, 123
MwoI GCNNNNNNNGC 6 cut(s) 41, 93, 274, 506, 854, 1670
NarI GGCGCC 2 cut(s) 171, 498
NciI CCSGG 2 cut(s) 214, 632
NcoI CCATGG 1 cut(s) 1516
NdeI CATATG 1 cut(s) 1158
NdeII GATC 8 cut(s) 75, 361, 378, 457, 818, 1099, 1311, 1366
NheI GCTAGC 1 cut(s) 268
NlaIII CATG 7 cut(s) 553, 761, 1310, 1373, 1462, 1520, 1552
NlaIV GGNNCC 7 cut(s) 31, 172, 459, 499, 1011, 1165, 1180
NmeAIII GCCGAG 2 cut(s) 253, 1184
NmuCI GTSAC 4 cut(s) 23, 178, 518, 871
NspI RCATGY 2 cut(s) 1310, 1462
PasI CCCWGGG 1 cut(s) 1625
PciI ACATGT 1 cut(s) 1458
PciSI GCTCTTC 1 cut(s) 1029
PcsI WCGNNNNNNNCGW 2 cut(s) 144, 317
PdmI GAANNNNTTC 1 cut(s) 1197
PfeI GAWTC 5 cut(s) 427, 485, 1198, 1382, 1535
PflMI CCANNNNNTGG 2 cut(s) 555, 1352
PinAI ACCGGT 1 cut(s) 522
PleI GAGTC 4 cut(s) 123, 309, 902, 1459
PluTI GGCGCC 2 cut(s) 174, 501
PpsI GAGTC 4 cut(s) 123, 309, 902, 1459
Ppu21I YACGTR 1 cut(s) 111
PpuMI RGGWCCY 1 cut(s) 1148
PscI ACATGT 1 cut(s) 1458
PsiI TTATAA 1 cut(s) 990
Psp124BI GAGCTC 1 cut(s) 192
Psp5II RGGWCCY 1 cut(s) 1148
Psp6I CCWGG 5 cut(s) 196, 730, 1297, 1426, 1624
PspEI GGTNACC 1 cut(s) 518
PspGI CCWGG 5 cut(s) 196, 730, 1297, 1426, 1624
PspN4I GGNNCC 7 cut(s) 31, 172, 459, 499, 1011, 1165, 1180
PspPI GGNCC 2 cut(s) 616, 1148
PspPPI RGGWCCY 1 cut(s) 1148
PstNI CAGNNNCTG 1 cut(s) 698
PsuI RGATCY 2 cut(s) 361, 457
RsaI GTAC 2 cut(s) 113, 1180
RsaNI GTAC 2 cut(s) 112, 1179
RseI CAYNNNNRTG 1 cut(s) 1699
SacI GAGCTC 1 cut(s) 192
SapI GCTCTTC 1 cut(s) 1029
SaqAI TTAA 4 cut(s) 903, 1050, 1224, 1409
Sau3AI GATC 8 cut(s) 75, 361, 378, 457, 818, 1099, 1311, 1366
Sau96I GGNCC 2 cut(s) 616, 1148
SchI GAGTC 4 cut(s) 123, 310, 902, 1459
ScrFI CCNGG 7 cut(s) 198, 214, 632, 732, 1299, 1428, 1626
SduI GDGCHC 4 cut(s) 192, 957, 1166, 1621
SexAI ACCWGGT 2 cut(s) 730, 1297
SfaNI GCATC 3 cut(s) 528, 685, 1207
SfcI CTRYAG 1 cut(s) 434
SfiI GGCCNNNNNGGCC 1 cut(s) 93
SfoI GGCGCC 2 cut(s) 172, 499
SinI GGWCC 2 cut(s) 616, 1148
SmiMI CAYNNNNRTG 1 cut(s) 1699
Sse9I AATT 9 cut(s) 260, 386, 789, 963, 1047, 1263, 1410, 1446, 1573
SspDI GGCGCC 2 cut(s) 170, 497
SspMI CTAG 4 cut(s) 269, 347, 398, 849
SstI GAGCTC 1 cut(s) 192
StyD4I CCNGG 7 cut(s) 196, 212, 630, 730, 1297, 1426, 1624
StyI CCWWGG 2 cut(s) 828, 1516
TaaI ACNGT 1 cut(s) 1343
TaiI ACGT 4 cut(s) 113, 162, 337, 515
TaqI TCGA 2 cut(s) 147, 638
TasI AATT 9 cut(s) 260, 386, 789, 963, 1047, 1263, 1410, 1446, 1573
TauI GCSGC 6 cut(s) 38, 87, 126, 156, 171, 176
TfiI GAWTC 5 cut(s) 427, 485, 1198, 1382, 1535
Tru1I TTAA 4 cut(s) 903, 1050, 1224, 1409
Tru9I TTAA 4 cut(s) 903, 1050, 1224, 1409
TscAI CASTG 3 cut(s) 1281, 1364, 1593
TseFI GTSAC 4 cut(s) 23, 178, 518, 871
TseI GCWGC 5 cut(s) 104, 578, 845, 1122, 1661
Tsp45I GTSAC 4 cut(s) 23, 178, 518, 871
TspDTI ATGAA 5 cut(s) 299, 854, 1312, 1428, 1431
TspGWI ACGGA 5 cut(s) 124, 197, 230, 294, 345
TspRI CASTG 3 cut(s) 1281, 1364, 1593
Van91I CCANNNNNTGG 2 cut(s) 555, 1352
VneI GTGCAC 1 cut(s) 953
VpaK11BI GGWCC 2 cut(s) 616, 1148
XagI CCTNNNNNAGG 2 cut(s) 1143, 1560
XapI RAATTY 2 cut(s) 386, 789
XceI RCATGY 2 cut(s) 1310, 1462
XmiI GTMKAC 2 cut(s) 606, 1374
XmnI GAANNNNTTC 1 cut(s) 1197
XspI CTAG 4 cut(s) 269, 347, 398, 849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.