Pyridine nucleotide-disulfide oxidoreductase domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G49555 |
| fragaria_vesca | FvH4_1g13300 |
| malus_domestica | MD02G1147300.v1.1 MD15G1261600.v1.1 |
| prunus_persica | Prupe.7G154800_v2.0.a1 Prupe.7G154800_v2.0.a1 Prupe.7G154900_v2.0.a1 Prupe.7G154900_v2.0.a1 |
| pyrus_communis | pycom02g11640 pycom15g22890 |
| rosa_chinensis | RchiOBHm_Chr2g0101541 |
| rosa_laevigata | RLG00000017088 |
| rosa_multiflora | Rmu_sc0006153.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00141210 |
| rosa_rugosa | Rorug02G0097700 |
| rosa_samantha | Rh2AG147900 Rh2BG153200 Rh2CG153700 Rh2DG153500 |
| rosa_wichuraiana | Rw2G011520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 86 |
| Acc36I | ACCTGC | 1 cut(s) | 1151 |
| Acc65I | GGTACC | 1 cut(s) | 1024 |
| AccB1I | GGYRCC | 2 cut(s) | 38, 1024 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 437 |
| AccBSI | CCGCTC | 2 cut(s) | 166, 1629 |
| AccII | CGCG | 4 cut(s) | 59, 174, 289, 1683 |
| AccIII | TCCGGA | 2 cut(s) | 1085, 1153 |
| AcoI | YGGCCR | 3 cut(s) | 100, 594, 1369 |
| AcsI | RAATTY | 4 cut(s) | 454, 464, 804, 1102 |
| AcuI | CTGAAG | 2 cut(s) | 329, 710 |
| AcyI | GRCGYC | 1 cut(s) | 417 |
| AfaI | GTAC | 2 cut(s) | 1026, 1290 |
| AflIII | ACRYGT | 3 cut(s) | 890, 1473, 1681 |
| AgsI | TTSAA | 9 cut(s) | 64, 220, 301, 664, 821, 978, 1015, 1496, 1694 |
| AjnI | CCWGG | 5 cut(s) | 745, 1223, 1312, 1441, 1639 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1488, 1520 |
| Alw21I | GWGCWC | 2 cut(s) | 207, 1663 |
| Alw26I | GTCTC | 1 cut(s) | 408 |
| Alw44I | GTGCAC | 1 cut(s) | 1659 |
| Ama87I | CYCGRG | 3 cut(s) | 139, 212, 1664 |
| Aor13HI | TCCGGA | 2 cut(s) | 1085, 1153 |
| AoxI | GGCC | 8 cut(s) | 100, 109, 142, 186, 365, 594, 604, 1369 |
| ApaLI | GTGCAC | 1 cut(s) | 1659 |
| ApeKI | GCWGC | 9 cut(s) | 21, 24, 27, 30, 119, 283, 304, 1179, 1676 |
| ApoI | RAATTY | 4 cut(s) | 454, 464, 804, 1102 |
| AseI | ATTAAT | 1 cut(s) | 918 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1526 |
| Asp718I | GGTACC | 1 cut(s) | 1024 |
| AspLEI | GCGC | 1 cut(s) | 174 |
| AspS9I | GGNCC | 7 cut(s) | 142, 186, 365, 376, 472, 631, 1163 |
| AsuC2I | CCSGG | 5 cut(s) | 213, 214, 647, 1665, 1666 |
| AsuHPI | GGTGA | 1 cut(s) | 806 |
| AvaI | CYCGRG | 3 cut(s) | 139, 212, 1664 |
| AvaII | GGWCC | 4 cut(s) | 376, 472, 631, 1163 |
| AxyI | CCTNAGG | 1 cut(s) | 601 |
| BaeGI | GKGCMC | 1 cut(s) | 1663 |
| BalI | TGGCCA | 1 cut(s) | 1371 |
| BanI | GGYRCC | 2 cut(s) | 38, 1024 |
| BanII | GRGCYC | 3 cut(s) | 207, 577, 880 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 724, 756 |
| Bbv12I | GWGCWC | 2 cut(s) | 207, 1663 |
| BbvCI | CCTCAGC | 1 cut(s) | 1167 |
| BbvI | GCAGC | 9 cut(s) | 33, 36, 39, 42, 131, 270, 291, 1191, 1663 |
| BceAI | ACGGC | 3 cut(s) | 124, 140, 176 |
| BciT130I | CCWGG | 5 cut(s) | 747, 1225, 1314, 1443, 1641 |
| BciVI | GTATCC | 1 cut(s) | 850 |
| BclI | TGATCA | 1 cut(s) | 1326 |
| BcnI | CCSGG | 5 cut(s) | 213, 214, 647, 1665, 1666 |
| BcoDI | GTCTC | 1 cut(s) | 408 |
| BfuAI | ACCTGC | 1 cut(s) | 1151 |
| BfuI | GTATCC | 1 cut(s) | 850 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 108 |
| Bme18I | GGWCC | 4 cut(s) | 376, 472, 631, 1163 |
| BmeT110I | CYCGRG | 3 cut(s) | 139, 212, 1664 |
| BmgT120I | GGNCC | 7 cut(s) | 142, 186, 365, 376, 472, 631, 1163 |
| BmiI | GGNNCC | 6 cut(s) | 40, 187, 366, 474, 1026, 1633 |
| BmrI | ACTGGG | 1 cut(s) | 1384 |
| BmsI | GCATC | 4 cut(s) | 412, 543, 1147, 1222 |
| BmuI | ACTGGG | 1 cut(s) | 1384 |
| BpmI | CTGGAG | 1 cut(s) | 227 |
| Bpu10I | CCTNAGC | 2 cut(s) | 864, 1167 |
| BpuEI | CTTGAG | 1 cut(s) | 182 |
| BpuMI | CCSGG | 5 cut(s) | 213, 214, 647, 1665, 1666 |
| Bsa29I | ATCGAT | 1 cut(s) | 1457 |
| BsaBI | GATNNNNATC | 2 cut(s) | 426, 1249 |
| BsaHI | GRCGYC | 1 cut(s) | 417 |
| BsaWI | WCCGGW | 2 cut(s) | 1085, 1153 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1291, 1321, 1371, 1401 |
| Bse118I | RCCGGY | 1 cut(s) | 35 |
| Bse1I | ACTGG | 3 cut(s) | 674, 1262, 1379 |
| Bse21I | CCTNAGG | 1 cut(s) | 601 |
| Bse3DI | GCAATG | 2 cut(s) | 515, 711 |
| Bse8I | GATNNNNATC | 2 cut(s) | 426, 1249 |
| BseAI | TCCGGA | 2 cut(s) | 1085, 1153 |
| BseBI | CCWGG | 5 cut(s) | 747, 1225, 1314, 1443, 1641 |
| BseCI | ATCGAT | 1 cut(s) | 1457 |
| BseGI | GGATG | 5 cut(s) | 349, 834, 1150, 1162, 1586 |
| BseJI | GATNNNNATC | 2 cut(s) | 426, 1249 |
| BseMI | GCAATG | 2 cut(s) | 515, 711 |
| BseMII | CTCAG | 3 cut(s) | 381, 1181, 1188 |
| BseNI | ACTGG | 3 cut(s) | 674, 1262, 1379 |
| BseRI | GAGGAG | 4 cut(s) | 25, 215, 242, 1223 |
| BseSI | GKGCMC | 1 cut(s) | 1663 |
| BseX3I | CGGCCG | 1 cut(s) | 594 |
| BseXI | GCAGC | 9 cut(s) | 33, 36, 39, 42, 131, 270, 291, 1191, 1663 |
| BseYI | CCCAGC | 2 cut(s) | 448, 872 |
| BsgI | GTGCAG | 2 cut(s) | 915, 1662 |
| Bsh1236I | CGCG | 4 cut(s) | 59, 174, 289, 1683 |
| Bsh1285I | CGRYCG | 1 cut(s) | 597 |
| BshFI | GGCC | 8 cut(s) | 102, 111, 144, 188, 367, 596, 606, 1371 |
| BshNI | GGYRCC | 2 cut(s) | 38, 1024 |
| BshVI | ATCGAT | 1 cut(s) | 1457 |
| BsiEI | CGRYCG | 1 cut(s) | 597 |
| BsiHKAI | GWGCWC | 2 cut(s) | 207, 1663 |
| BsiHKCI | CYCGRG | 3 cut(s) | 139, 212, 1664 |
| BsiSI | CCGG | 6 cut(s) | 36, 213, 647, 1086, 1154, 1665 |
| BslFI | GGGAC | 1 cut(s) | 92 |
| BsmAI | GTCTC | 1 cut(s) | 408 |
| BsmBI | CGTCTC | 1 cut(s) | 408 |
| BsmFI | GGGAC | 1 cut(s) | 92 |
| BsmI | GAATGC | 2 cut(s) | 970, 1182 |
| BsnI | GGCC | 8 cut(s) | 102, 111, 144, 188, 367, 596, 606, 1371 |
| BsoBI | CYCGRG | 3 cut(s) | 139, 212, 1664 |
| Bsp1286I | GDGCHC | 4 cut(s) | 207, 577, 880, 1663 |
| Bsp13I | TCCGGA | 2 cut(s) | 1085, 1153 |
| Bsp143I | GATC | 3 cut(s) | 535, 1326, 1458 |
| Bsp19I | CCATGG | 1 cut(s) | 1531 |
| BspANI | GGCC | 8 cut(s) | 102, 111, 144, 188, 367, 596, 606, 1371 |
| BspCNI | CTCAG | 3 cut(s) | 382, 1180, 1189 |
| BspDI | ATCGAT | 1 cut(s) | 1457 |
| BspEI | TCCGGA | 2 cut(s) | 1085, 1153 |
| BspFNI | CGCG | 4 cut(s) | 59, 174, 289, 1683 |
| BspLI | GGNNCC | 6 cut(s) | 40, 187, 366, 474, 1026, 1633 |
| BspMI | ACCTGC | 1 cut(s) | 1151 |
| BspQI | GCTCTTC | 2 cut(s) | 1044, 1562 |
| BspT107I | GGYRCC | 2 cut(s) | 38, 1024 |
| BsrBI | CCGCTC | 2 cut(s) | 166, 1629 |
| BsrDI | GCAATG | 2 cut(s) | 515, 711 |
| BsrFI | RCCGGY | 1 cut(s) | 35 |
| BsrI | ACTGG | 3 cut(s) | 674, 1262, 1379 |
| BssAI | RCCGGY | 1 cut(s) | 35 |
| BssMI | GATC | 3 cut(s) | 535, 1326, 1458 |
| BssNI | GRCGYC | 1 cut(s) | 417 |
| BssT1I | CCWWGG | 3 cut(s) | 654, 843, 1531 |
| Bst2UI | CCWGG | 5 cut(s) | 747, 1225, 1314, 1443, 1641 |
| Bst4CI | ACNGT | 1 cut(s) | 1387 |
| Bst6I | CTCTTC | 2 cut(s) | 1044, 1562 |
| BstACI | GRCGYC | 1 cut(s) | 417 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 701 |
| BstC8I | GCNNGC | 3 cut(s) | 136, 1319, 1681 |
| BstDEI | CTNAG | 7 cut(s) | 390, 584, 601, 864, 1167, 1197, 1219 |
| BstDSI | CCRYGG | 2 cut(s) | 287, 1531 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1575 |
| BstF5I | GGATG | 5 cut(s) | 349, 834, 1150, 1162, 1586 |
| BstFNI | CGCG | 4 cut(s) | 59, 174, 289, 1683 |
| BstHHI | GCGC | 1 cut(s) | 174 |
| BstKTI | GATC | 3 cut(s) | 538, 1329, 1461 |
| BstMAI | GTCTC | 1 cut(s) | 408 |
| BstMBI | GATC | 3 cut(s) | 535, 1326, 1458 |
| BstMCI | CGRYCG | 1 cut(s) | 597 |
| BstNI | CCWGG | 5 cut(s) | 747, 1225, 1314, 1443, 1641 |
| BstNSI | RCATGY | 4 cut(s) | 894, 1175, 1325, 1477 |
| BstSLI | GKGCMC | 1 cut(s) | 1663 |
| BstUI | CGCG | 4 cut(s) | 59, 174, 289, 1683 |
| BstV1I | GCAGC | 9 cut(s) | 33, 36, 39, 42, 131, 270, 291, 1191, 1663 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 746 |
| BstZI | CGGCCG | 1 cut(s) | 594 |
| Bsu15I | ATCGAT | 1 cut(s) | 1457 |
| Bsu36I | CCTNAGG | 1 cut(s) | 601 |
| BsuI | GTATCC | 1 cut(s) | 850 |
| BsuRI | GGCC | 8 cut(s) | 102, 111, 144, 188, 367, 596, 606, 1371 |
| BsuTUI | ATCGAT | 1 cut(s) | 1457 |
| BtgI | CCRYGG | 2 cut(s) | 287, 1531 |
| BtsCI | GGATG | 5 cut(s) | 349, 834, 1150, 1162, 1586 |
| BtsI | GCAGTG | 2 cut(s) | 532, 930 |
| BtsIMutI | CAGTG | 3 cut(s) | 532, 930, 1372 |
| BveI | ACCTGC | 1 cut(s) | 1151 |
| Cac8I | GCNNGC | 3 cut(s) | 136, 1319, 1681 |
| CciNI | GCGGCCGC | 1 cut(s) | 594 |
| CfoI | GCGC | 1 cut(s) | 174 |
| Cfr10I | RCCGGY | 1 cut(s) | 35 |
| Cfr13I | GGNCC | 7 cut(s) | 142, 186, 365, 376, 472, 631, 1163 |
| Cfr42I | CCGCGG | 1 cut(s) | 290 |
| Cfr9I | CCCGGG | 2 cut(s) | 212, 1664 |
| ClaI | ATCGAT | 1 cut(s) | 1457 |
| CseI | GACGC | 2 cut(s) | 89, 425 |
| Csp6I | GTAC | 2 cut(s) | 1025, 1289 |
| CviAII | CATG | 8 cut(s) | 773, 891, 1172, 1204, 1322, 1474, 1532, 1564 |
| CviQI | GTAC | 2 cut(s) | 1025, 1289 |
| DdeI | CTNAG | 7 cut(s) | 390, 584, 601, 864, 1167, 1197, 1219 |
| DpnI | GATC | 3 cut(s) | 537, 1328, 1460 |
| DpnII | GATC | 3 cut(s) | 535, 1326, 1458 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 86 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 86 |
| EaeI | YGGCCR | 3 cut(s) | 100, 594, 1369 |
| EagI | CGGCCG | 1 cut(s) | 594 |
| Eam1104I | CTCTTC | 2 cut(s) | 1044, 1562 |
| EarI | CTCTTC | 2 cut(s) | 1044, 1562 |
| EciI | GGCGGA | 3 cut(s) | 22, 245, 1473 |
| Ecl136II | GAGCTC | 1 cut(s) | 205 |
| EclXI | CGGCCG | 1 cut(s) | 594 |
| Eco130I | CCWWGG | 3 cut(s) | 654, 843, 1531 |
| Eco24I | GRGCYC | 3 cut(s) | 207, 577, 880 |
| Eco32I | GATATC | 1 cut(s) | 353 |
| Eco47I | GGWCC | 4 cut(s) | 376, 472, 631, 1163 |
| Eco52I | CGGCCG | 1 cut(s) | 594 |
| Eco53kI | GAGCTC | 1 cut(s) | 205 |
| Eco57I | CTGAAG | 2 cut(s) | 329, 710 |
| Eco81I | CCTNAGG | 1 cut(s) | 601 |
| Eco88I | CYCGRG | 3 cut(s) | 139, 212, 1664 |
| EcoICRI | GAGCTC | 1 cut(s) | 205 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1575 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1163 |
| EcoRII | CCWGG | 5 cut(s) | 745, 1223, 1312, 1441, 1639 |
| EcoRV | GATATC | 1 cut(s) | 353 |
| EcoT14I | CCWWGG | 3 cut(s) | 654, 843, 1531 |
| EcoT38I | GRGCYC | 3 cut(s) | 207, 577, 880 |
| ErhI | CCWWGG | 3 cut(s) | 654, 843, 1531 |
| Esp3I | CGTCTC | 1 cut(s) | 408 |
| FaeI | CATG | 8 cut(s) | 776, 894, 1175, 1207, 1325, 1477, 1535, 1567 |
| FaqI | GGGAC | 1 cut(s) | 92 |
| FatI | CATG | 8 cut(s) | 772, 890, 1171, 1203, 1321, 1473, 1531, 1563 |
| FauI | CCCGC | 3 cut(s) | 176, 1369, 1616 |
| FbaI | TGATCA | 1 cut(s) | 1326 |
| FokI | GGATG | 5 cut(s) | 356, 841, 1137, 1169, 1593 |
| FriOI | GRGCYC | 3 cut(s) | 207, 577, 880 |
| GlaI | GCGC | 1 cut(s) | 173 |
| GsaI | CCCAGC | 2 cut(s) | 452, 876 |
| GsuI | CTGGAG | 1 cut(s) | 227 |
| HaeIII | GGCC | 8 cut(s) | 102, 111, 144, 188, 367, 596, 606, 1371 |
| HapII | CCGG | 6 cut(s) | 36, 213, 647, 1086, 1154, 1665 |
| HgaI | GACGC | 2 cut(s) | 89, 425 |
| HhaI | GCGC | 1 cut(s) | 174 |
| Hin1I | GRCGYC | 1 cut(s) | 417 |
| Hin1II | CATG | 8 cut(s) | 776, 894, 1175, 1207, 1325, 1477, 1535, 1567 |
| Hin6I | GCGC | 1 cut(s) | 172 |
| HinP1I | GCGC | 1 cut(s) | 172 |
| HincII | GTYRAC | 1 cut(s) | 1479 |
| HindII | GTYRAC | 1 cut(s) | 1479 |
| HpaII | CCGG | 6 cut(s) | 36, 213, 647, 1086, 1154, 1665 |
| HphI | GGTGA | 1 cut(s) | 806 |
| Hpy166II | GTNNAC | 6 cut(s) | 330, 1338, 1390, 1479, 1661, 1702 |
| Hpy188I | TCNGA | 7 cut(s) | 95, 391, 682, 690, 1075, 1133, 1198 |
| Hpy188III | TCNNGA | 5 cut(s) | 244, 1043, 1086, 1154, 1691 |
| Hpy8I | GTNNAC | 6 cut(s) | 330, 1338, 1390, 1479, 1661, 1702 |
| Hpy99I | CGWCG | 2 cut(s) | 155, 328 |
| HpyAV | CCTTC | 4 cut(s) | 304, 685, 815, 1021 |
| HpyCH4III | ACNGT | 1 cut(s) | 1387 |
| HpyF3I | CTNAG | 7 cut(s) | 390, 584, 601, 864, 1167, 1197, 1219 |
| Hsp92I | GRCGYC | 1 cut(s) | 417 |
| Hsp92II | CATG | 8 cut(s) | 776, 894, 1175, 1207, 1325, 1477, 1535, 1567 |
| HspAI | GCGC | 1 cut(s) | 172 |
| Kpn2I | TCCGGA | 2 cut(s) | 1085, 1153 |
| KpnI | GGTACC | 1 cut(s) | 1028 |
| Ksp22I | TGATCA | 1 cut(s) | 1326 |
| KspI | CCGCGG | 1 cut(s) | 290 |
| Kzo9I | GATC | 3 cut(s) | 535, 1326, 1458 |
| LguI | GCTCTTC | 2 cut(s) | 1044, 1562 |
| LmnI | GCTCC | 5 cut(s) | 12, 202, 496, 1088, 1626 |
| Lsp1109I | GCAGC | 9 cut(s) | 33, 36, 39, 42, 131, 270, 291, 1191, 1663 |
| LweI | GCATC | 4 cut(s) | 412, 543, 1147, 1222 |
| MaeIII | GTNAC | 5 cut(s) | 193, 317, 886, 1466, 1670 |
| MalI | GATC | 3 cut(s) | 537, 1328, 1460 |
| MbiI | CCGCTC | 2 cut(s) | 166, 1629 |
| MboI | GATC | 3 cut(s) | 535, 1326, 1458 |
| MfeI | CAATTG | 2 cut(s) | 908, 978 |
| MhlI | GDGCHC | 4 cut(s) | 207, 577, 880, 1663 |
| MlsI | TGGCCA | 1 cut(s) | 1371 |
| MluI | ACGCGT | 1 cut(s) | 1681 |
| MluNI | TGGCCA | 1 cut(s) | 1371 |
| MlyI | GAGTC | 5 cut(s) | 325, 524, 686, 917, 1474 |
| MmeI | TCCRAC | 1 cut(s) | 462 |
| Mox20I | TGGCCA | 1 cut(s) | 1371 |
| MroI | TCCGGA | 2 cut(s) | 1085, 1153 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1526 |
| MscI | TGGCCA | 1 cut(s) | 1371 |
| MseI | TTAA | 4 cut(s) | 543, 918, 1065, 1712 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1155, 1411, 1714 |
| Msp20I | TGGCCA | 1 cut(s) | 1371 |
| MspA1I | CMGCKG | 3 cut(s) | 289, 448, 1603 |
| MspI | CCGG | 6 cut(s) | 36, 213, 647, 1086, 1154, 1665 |
| MunI | CAATTG | 2 cut(s) | 908, 978 |
| Mva1269I | GAATGC | 2 cut(s) | 970, 1182 |
| MvaI | CCWGG | 5 cut(s) | 747, 1225, 1314, 1443, 1641 |
| MvnI | CGCG | 4 cut(s) | 59, 174, 289, 1683 |
| NciI | CCSGG | 5 cut(s) | 213, 214, 647, 1665, 1666 |
| NcoI | CCATGG | 1 cut(s) | 1531 |
| NdeII | GATC | 3 cut(s) | 535, 1326, 1458 |
| NlaIII | CATG | 8 cut(s) | 776, 894, 1175, 1207, 1325, 1477, 1535, 1567 |
| NlaIV | GGNNCC | 6 cut(s) | 40, 187, 366, 474, 1026, 1633 |
| NmuCI | GTSAC | 1 cut(s) | 317 |
| NotI | GCGGCCGC | 1 cut(s) | 594 |
| NspI | RCATGY | 4 cut(s) | 894, 1175, 1325, 1477 |
| PasI | CCCWGGG | 1 cut(s) | 1640 |
| PciI | ACATGT | 2 cut(s) | 890, 1473 |
| PciSI | GCTCTTC | 2 cut(s) | 1044, 1562 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1680 |
| PctI | GAATGC | 2 cut(s) | 970, 1182 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1526 |
| PfeI | GAWTC | 6 cut(s) | 442, 485, 500, 710, 1397, 1550 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 437 |
| PleI | GAGTC | 5 cut(s) | 324, 523, 685, 917, 1474 |
| PpsI | GAGTC | 5 cut(s) | 324, 523, 685, 917, 1474 |
| PpuMI | RGGWCCY | 1 cut(s) | 1163 |
| PscI | ACATGT | 2 cut(s) | 890, 1473 |
| PshBI | ATTAAT | 1 cut(s) | 918 |
| Psp124BI | GAGCTC | 1 cut(s) | 207 |
| Psp5II | RGGWCCY | 1 cut(s) | 1163 |
| Psp6I | CCWGG | 5 cut(s) | 745, 1223, 1312, 1441, 1639 |
| PspFI | CCCAGC | 2 cut(s) | 448, 872 |
| PspGI | CCWGG | 5 cut(s) | 745, 1223, 1312, 1441, 1639 |
| PspN4I | GGNNCC | 6 cut(s) | 40, 187, 366, 474, 1026, 1633 |
| PspPI | GGNCC | 7 cut(s) | 142, 186, 365, 376, 472, 631, 1163 |
| PspPPI | RGGWCCY | 1 cut(s) | 1163 |
| PvuII | CAGCTG | 1 cut(s) | 448 |
| RsaI | GTAC | 2 cut(s) | 1026, 1290 |
| RsaNI | GTAC | 2 cut(s) | 1025, 1289 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1155, 1411, 1714 |
| SacI | GAGCTC | 1 cut(s) | 207 |
| SacII | CCGCGG | 1 cut(s) | 290 |
| SapI | GCTCTTC | 2 cut(s) | 1044, 1562 |
| SaqAI | TTAA | 4 cut(s) | 543, 918, 1065, 1712 |
| Sau3AI | GATC | 3 cut(s) | 535, 1326, 1458 |
| Sau96I | GGNCC | 7 cut(s) | 142, 186, 365, 376, 472, 631, 1163 |
| SchI | GAGTC | 5 cut(s) | 325, 524, 686, 917, 1474 |
| SduI | GDGCHC | 4 cut(s) | 207, 577, 880, 1663 |
| SfaNI | GCATC | 4 cut(s) | 412, 543, 1147, 1222 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 108 |
| Sfr303I | CCGCGG | 1 cut(s) | 290 |
| SgrBI | CCGCGG | 1 cut(s) | 290 |
| SinI | GGWCC | 4 cut(s) | 376, 472, 631, 1163 |
| SmaI | CCCGGG | 2 cut(s) | 214, 1666 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1155, 1411, 1714 |
| SmlI | CTYRAG | 1 cut(s) | 161 |
| SmoI | CTYRAG | 1 cut(s) | 161 |
| SstI | GAGCTC | 1 cut(s) | 207 |
| StyI | CCWWGG | 3 cut(s) | 654, 843, 1531 |
| TaaI | ACNGT | 1 cut(s) | 1387 |
| TaqI | TCGA | 3 cut(s) | 1253, 1293, 1457 |
| TatI | WGTACW | 1 cut(s) | 1288 |
| TfiI | GAWTC | 6 cut(s) | 442, 485, 500, 710, 1397, 1550 |
| Tru1I | TTAA | 4 cut(s) | 543, 918, 1065, 1712 |
| Tru9I | TTAA | 4 cut(s) | 543, 918, 1065, 1712 |
| TscAI | CASTG | 3 cut(s) | 532, 937, 1379 |
| TseFI | GTSAC | 1 cut(s) | 317 |
| TseI | GCWGC | 9 cut(s) | 21, 24, 27, 30, 119, 283, 304, 1179, 1676 |
| Tsp45I | GTSAC | 1 cut(s) | 317 |
| TspDTI | ATGAA | 3 cut(s) | 1175, 1443, 1446 |
| TspGWI | ACGGA | 3 cut(s) | 139, 309, 1046 |
| TspMI | CCCGGG | 2 cut(s) | 212, 1664 |
| TspRI | CASTG | 3 cut(s) | 532, 937, 1379 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 437 |
| VneI | GTGCAC | 1 cut(s) | 1659 |
| VpaK11BI | GGWCC | 4 cut(s) | 376, 472, 631, 1163 |
| VspI | ATTAAT | 1 cut(s) | 918 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1575 |
| XapI | RAATTY | 4 cut(s) | 454, 464, 804, 1102 |
| XceI | RCATGY | 4 cut(s) | 894, 1175, 1325, 1477 |
| XmaI | CCCGGG | 2 cut(s) | 212, 1664 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1526 |