MD15G1261600.v1.1

Pyridine nucleotide-disulfide oxidoreductase domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0011262
Physical Location & Seq
Forward (+)
22369035 .. 22373218
4184 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1261600.v1.1.491

Sequence Viewer

Length: 1719 bp
ATGTGGCGGAGGAGCTTTAGCAGCAGCAGCAGCACCGGCACCGCCGCTGCTACAACTGCTTTGAAGAACAAGAAATGGGACGCTCTGGTCATTGGAGGCGGCCACAACGGCCTCACAGCAGCCGCATACCTTGCACGCTCCGGCCTATCCGTCGCCGTCCTTGAGCGGCGGCACGTGATTGGCGGCGCCGCCGTTACCGAGGAGCTCGTTCCCGGGTTCAAGTTCTCTCGGTGTAGCTACCTCCAGAGCCTCCTCCGCCCGTCCATCATCAAAGAATTAGAGCTGCCGCGGCACGGATTGAAGCTGCTGAAGGGGAGTCATTCGTCCTTTACACCCTGTTTGGATGGAAGATATCTTCTTTTGGGACCAAACAAGGACCATAACCACTCTGAGATTTCCAAGTTCTCCAAAAGAGACGCCGATGCTTATCCAAGATATGGGAATCAGCTAGGGAATTTTTGTGAATTTATGGACCCCTTGTTGGATTCAGCTCCCCCTGAATCTTTGCAATGCGAGTCATCTTGCAGTGTTAGTGATCGGTTTAAGAATAAGATGCACAATTCGATGTTTTGGGCTCGGTGTCTGAGACAAGCGGCCGCCTTAGGCCAAAAGGACTTTGTGGAGTTTATGGACCTTTTGTTATCCCCGGCTTCCAAGGTTTTGAATAACTGGTTTGAGTCAGATGTTCTGAAGGCAACCCTCGCAATGGATTCTGTAATAGGAACTACGGGAAGTGTCCATACACCTGGGAGTGGATATGTTCTGCTACATCATGTGATGGGAGAAACTGATGGTGAGCGTGGAATCTGGTCGTTTGTTGAAGGTGGGATGGGTTCAGTATCCTTGGCTATCGCTAATGCCGCTAAGGAAGCTGGCGCTCATATTGTAACATGTGCAGAGGTTCAGCAATTGTTGATTAATGACTCTGGCACTGCGGACGGGGTTTTGCTGACTGATGGCTCACAGGTGCATTCTTCAATTGTTTTATCAAATGCAACCCCTTACAAAACCTTCAAGGAGTTGGTACCAGATAATGCTCTTCCTGATAGTTTCGTCCGTGCAATTAAGTATTCTGATTACAGCTCCGGAACTACAAAAATAAATTTAGCGGTTGATAAATTGCCCCAGTTCAAAAGTTGCAAGATGGGTCATCCGGATGCAGGTCCTCAGCATGTGGGCAGCATTCATATTGGTTCTGAGAGCATGGAGGAGTTTCAATTAGCCTGGCAAGATGCTGTCAATGGATTGCCATCGAACAGACCAGTTATTGAGATGACAATTCCCTCTGTACTTGACAAAACTATTTCTCCCCCTGGCAAGCATGTGATCAACTTGTTTACTCAATATACACCATATAGCCCATCAGATGGCCACTGGGGAGATACTGTTTACAGAGAATTGTTCGCACAAAAATGTTTTAGCTTGGTTGATGAATATGCGCCTGGGTTTAGTTCATCAATCATTGGTTACGACATGTTGACTCCGCCAGACCTTGAAAGGGAAATTGGTTTGACAGGAGGGAATATCTTCCATGGTGCTATGGGATTGGATTCGCTCTTCCTCATGCGACCTGTGAAAGGATGGTCAAATTACAGAACGCCGCTGAAAGGGCTGTATTTGTGCGGGAGCGGAACCCACCCAGGGGGCGGTGTGATGGGTGCACCCGGGCGTAATGCTGCACGCGTAGTTCTTGTAGATGTGAACAAGCCATTAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Amino_oxidase DAO NAD_binding_8

Protein Analysis

573

Amino Acids

61.86

Weight (kDa)

6.83

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thi4 PF01946 21 - 64 3.1e-06 Thi4 family
DAO PF01266 27 - 63 6.5e-07 FAD dependent oxidoreductase
FAD_oxidored PF12831 27 - 69 2.3e-07 FAD dependent oxidoreductase
NAD_binding_8 PF13450 30 - 77 5e-11 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 173 - 415 1.7e-06 Flavin containing amine oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 86
Acc36I ACCTGC 1 cut(s) 1151
Acc65I GGTACC 1 cut(s) 1024
AccB1I GGYRCC 3 cut(s) 38, 185, 1024
AccB7I CCANNNNNTGG 2 cut(s) 437, 1367
AccBSI CCGCTC 2 cut(s) 166, 1629
AccII CGCG 2 cut(s) 289, 1683
AccIII TCCGGA 2 cut(s) 1085, 1153
AcoI YGGCCR 3 cut(s) 100, 594, 1369
AcsI RAATTY 3 cut(s) 454, 464, 1102
AcuI CTGAAG 2 cut(s) 329, 710
AcvI CACGTG 1 cut(s) 175
AcyI GRCGYC 2 cut(s) 186, 417
AfaI GTAC 2 cut(s) 1026, 1290
AflIII ACRYGT 3 cut(s) 890, 1473, 1681
AjnI CCWGG 5 cut(s) 745, 1223, 1312, 1441, 1639
AjuI GAANNNNNNNTTGG 2 cut(s) 1488, 1520
Alw21I GWGCWC 2 cut(s) 207, 1663
Alw26I GTCTC 2 cut(s) 408, 580
Alw44I GTGCAC 1 cut(s) 1659
Ama87I CYCGRG 2 cut(s) 212, 1664
Aor13HI TCCGGA 2 cut(s) 1085, 1153
AoxI GGCC 6 cut(s) 100, 109, 142, 594, 604, 1369
ApaLI GTGCAC 1 cut(s) 1659
ApoI RAATTY 3 cut(s) 454, 464, 1102
AseI ATTAAT 1 cut(s) 918
Asp700I GAANNNNTTC 1 cut(s) 1526
Asp718I GGTACC 1 cut(s) 1024
AspLEI GCGC 3 cut(s) 188, 878, 1441
AspS9I GGNCC 5 cut(s) 365, 376, 472, 631, 1163
AsuC2I CCSGG 5 cut(s) 213, 214, 647, 1665, 1666
AsuHPI GGTGA 1 cut(s) 806
AvaI CYCGRG 2 cut(s) 212, 1664
AvaII GGWCC 5 cut(s) 365, 376, 472, 631, 1163
AxyI CCTNAGG 1 cut(s) 601
BaeGI GKGCMC 1 cut(s) 1663
BalI TGGCCA 1 cut(s) 1371
BanI GGYRCC 3 cut(s) 38, 185, 1024
BanII GRGCYC 2 cut(s) 207, 577
BarI GAAGNNNNNNTAC 2 cut(s) 724, 756
BbrPI CACGTG 1 cut(s) 175
Bbv12I GWGCWC 2 cut(s) 207, 1663
BbvCI CCTCAGC 1 cut(s) 1167
BceAI ACGGC 3 cut(s) 124, 140, 176
BciT130I CCWGG 5 cut(s) 747, 1225, 1314, 1443, 1641
BciVI GTATCC 1 cut(s) 850
BclI TGATCA 1 cut(s) 1326
BcnI CCSGG 5 cut(s) 213, 214, 647, 1665, 1666
BcoDI GTCTC 2 cut(s) 408, 580
BfaI CTAG 1 cut(s) 449
BfoI RGCGCY 2 cut(s) 189, 879
BfuAI ACCTGC 1 cut(s) 1151
BfuI GTATCC 1 cut(s) 850
BglI GCCNNNNNGGC 1 cut(s) 108
Bme18I GGWCC 5 cut(s) 365, 376, 472, 631, 1163
BmeT110I CYCGRG 2 cut(s) 212, 1664
BmgT120I GGNCC 5 cut(s) 365, 376, 472, 631, 1163
BmiI GGNNCC 6 cut(s) 40, 187, 366, 474, 1026, 1633
BmrI ACTGGG 2 cut(s) 1120, 1384
BmsI GCATC 4 cut(s) 412, 543, 1147, 1222
BmuI ACTGGG 2 cut(s) 1120, 1384
BpmI CTGGAG 1 cut(s) 227
Bpu10I CCTNAGC 2 cut(s) 864, 1167
BpuEI CTTGAG 1 cut(s) 182
BpuMI CCSGG 5 cut(s) 213, 214, 647, 1665, 1666
BsaAI YACGTR 1 cut(s) 175
BsaBI GATNNNNATC 2 cut(s) 426, 1249
BsaHI GRCGYC 2 cut(s) 186, 417
BsaWI WCCGGW 2 cut(s) 1085, 1153
BsaXI ACNNNNNCTCC 4 cut(s) 1291, 1321, 1371, 1401
Bse118I RCCGGY 1 cut(s) 35
Bse1I ACTGG 4 cut(s) 674, 1126, 1262, 1379
Bse21I CCTNAGG 1 cut(s) 601
Bse3DI GCAATG 2 cut(s) 515, 711
Bse8I GATNNNNATC 2 cut(s) 426, 1249
BseAI TCCGGA 2 cut(s) 1085, 1153
BseBI CCWGG 5 cut(s) 747, 1225, 1314, 1443, 1641
BseGI GGATG 5 cut(s) 349, 834, 1150, 1162, 1586
BseJI GATNNNNATC 2 cut(s) 426, 1249
BseMI GCAATG 2 cut(s) 515, 711
BseMII CTCAG 4 cut(s) 381, 575, 1181, 1188
BseNI ACTGG 4 cut(s) 674, 1126, 1262, 1379
BseRI GAGGAG 4 cut(s) 25, 215, 242, 1223
BseSI GKGCMC 1 cut(s) 1663
BseX3I CGGCCG 1 cut(s) 594
BsgI GTGCAG 2 cut(s) 915, 1662
Bsh1236I CGCG 2 cut(s) 289, 1683
Bsh1285I CGRYCG 1 cut(s) 597
BshFI GGCC 6 cut(s) 102, 111, 144, 596, 606, 1371
BshNI GGYRCC 3 cut(s) 38, 185, 1024
BsiEI CGRYCG 1 cut(s) 597
BsiHKAI GWGCWC 2 cut(s) 207, 1663
BsiHKCI CYCGRG 2 cut(s) 212, 1664
BsiSI CCGG 7 cut(s) 36, 141, 213, 647, 1086, 1154, 1665
BslFI GGGAC 2 cut(s) 92, 378
BsmAI GTCTC 2 cut(s) 408, 580
BsmBI CGTCTC 1 cut(s) 408
BsmFI GGGAC 2 cut(s) 92, 378
BsmI GAATGC 2 cut(s) 970, 1182
BsnI GGCC 6 cut(s) 102, 111, 144, 596, 606, 1371
BsoBI CYCGRG 2 cut(s) 212, 1664
Bsp1286I GDGCHC 3 cut(s) 207, 577, 1663
Bsp13I TCCGGA 2 cut(s) 1085, 1153
Bsp143I GATC 2 cut(s) 535, 1326
Bsp19I CCATGG 1 cut(s) 1531
BspANI GGCC 6 cut(s) 102, 111, 144, 596, 606, 1371
BspCNI CTCAG 4 cut(s) 382, 576, 1180, 1189
BspEI TCCGGA 2 cut(s) 1085, 1153
BspFNI CGCG 2 cut(s) 289, 1683
BspLI GGNNCC 6 cut(s) 40, 187, 366, 474, 1026, 1633
BspMI ACCTGC 1 cut(s) 1151
BspQI GCTCTTC 2 cut(s) 1044, 1562
BspT107I GGYRCC 3 cut(s) 38, 185, 1024
BsrBI CCGCTC 2 cut(s) 166, 1629
BsrDI GCAATG 2 cut(s) 515, 711
BsrFI RCCGGY 1 cut(s) 35
BsrI ACTGG 4 cut(s) 674, 1126, 1262, 1379
BssAI RCCGGY 1 cut(s) 35
BssMI GATC 2 cut(s) 535, 1326
BssNI GRCGYC 2 cut(s) 186, 417
BssT1I CCWWGG 3 cut(s) 654, 843, 1531
Bst2UI CCWGG 5 cut(s) 747, 1225, 1314, 1443, 1641
Bst4CI ACNGT 1 cut(s) 1387
Bst6I CTCTTC 2 cut(s) 1044, 1562
BstACI GRCGYC 2 cut(s) 186, 417
BstAPI GCANNNNNTGC 1 cut(s) 131
BstBAI YACGTR 1 cut(s) 175
BstC8I GCNNGC 4 cut(s) 136, 874, 1319, 1681
BstDEI CTNAG 6 cut(s) 390, 584, 601, 864, 1167, 1197
BstDSI CCRYGG 2 cut(s) 287, 1531
BstENI CCTNNNNNAGG 1 cut(s) 1575
BstF5I GGATG 5 cut(s) 349, 834, 1150, 1162, 1586
BstFNI CGCG 2 cut(s) 289, 1683
BstH2I RGCGCY 2 cut(s) 189, 879
BstHHI GCGC 3 cut(s) 188, 878, 1441
BstKTI GATC 2 cut(s) 538, 1329
BstMAI GTCTC 2 cut(s) 408, 580
BstMBI GATC 2 cut(s) 535, 1326
BstMCI CGRYCG 1 cut(s) 597
BstNI CCWGG 5 cut(s) 747, 1225, 1314, 1443, 1641
BstNSI RCATGY 4 cut(s) 894, 1175, 1325, 1477
BstSLI GKGCMC 1 cut(s) 1663
BstUI CGCG 2 cut(s) 289, 1683
BstXI CCANNNNNNTGG 1 cut(s) 746
BstZI CGGCCG 1 cut(s) 594
Bsu36I CCTNAGG 1 cut(s) 601
BsuI GTATCC 1 cut(s) 850
BsuRI GGCC 6 cut(s) 102, 111, 144, 596, 606, 1371
BtgI CCRYGG 2 cut(s) 287, 1531
BtsCI GGATG 5 cut(s) 349, 834, 1150, 1162, 1586
BtsI GCAGTG 2 cut(s) 532, 930
BtsIMutI CAGTG 3 cut(s) 532, 930, 1372
BveI ACCTGC 1 cut(s) 1151
Cac8I GCNNGC 4 cut(s) 136, 874, 1319, 1681
CciNI GCGGCCGC 1 cut(s) 594
CfoI GCGC 3 cut(s) 188, 878, 1441
Cfr10I RCCGGY 1 cut(s) 35
Cfr13I GGNCC 5 cut(s) 365, 376, 472, 631, 1163
Cfr42I CCGCGG 1 cut(s) 290
Cfr9I CCCGGG 2 cut(s) 212, 1664
CseI GACGC 2 cut(s) 89, 425
Csp6I GTAC 2 cut(s) 1025, 1289
CviAII CATG 8 cut(s) 773, 891, 1172, 1204, 1322, 1474, 1532, 1564
CviQI GTAC 2 cut(s) 1025, 1289
DdeI CTNAG 6 cut(s) 390, 584, 601, 864, 1167, 1197
DinI GGCGCC 1 cut(s) 187
DpnI GATC 2 cut(s) 537, 1328
DpnII GATC 2 cut(s) 535, 1326
DrdI GACNNNNNNGTC 1 cut(s) 86
DseDI GACNNNNNNGTC 1 cut(s) 86
EaeI YGGCCR 3 cut(s) 100, 594, 1369
EagI CGGCCG 1 cut(s) 594
Eam1104I CTCTTC 2 cut(s) 1044, 1562
EarI CTCTTC 2 cut(s) 1044, 1562
EciI GGCGGA 3 cut(s) 22, 245, 1473
Ecl136II GAGCTC 1 cut(s) 205
EclXI CGGCCG 1 cut(s) 594
Eco130I CCWWGG 3 cut(s) 654, 843, 1531
Eco24I GRGCYC 2 cut(s) 207, 577
Eco32I GATATC 1 cut(s) 353
Eco47I GGWCC 5 cut(s) 365, 376, 472, 631, 1163
Eco52I CGGCCG 1 cut(s) 594
Eco53kI GAGCTC 1 cut(s) 205
Eco57I CTGAAG 2 cut(s) 329, 710
Eco72I CACGTG 1 cut(s) 175
Eco81I CCTNAGG 1 cut(s) 601
Eco88I CYCGRG 2 cut(s) 212, 1664
EcoICRI GAGCTC 1 cut(s) 205
EcoNI CCTNNNNNAGG 1 cut(s) 1575
EcoO109I RGGNCCY 1 cut(s) 1163
EcoRII CCWGG 5 cut(s) 745, 1223, 1312, 1441, 1639
EcoRV GATATC 1 cut(s) 353
EcoT14I CCWWGG 3 cut(s) 654, 843, 1531
EcoT38I GRGCYC 2 cut(s) 207, 577
EgeI GGCGCC 1 cut(s) 187
EheI GGCGCC 1 cut(s) 187
ErhI CCWWGG 3 cut(s) 654, 843, 1531
Esp3I CGTCTC 1 cut(s) 408
FaeI CATG 8 cut(s) 776, 894, 1175, 1207, 1325, 1477, 1535, 1567
FaqI GGGAC 2 cut(s) 92, 378
FatI CATG 8 cut(s) 772, 890, 1171, 1203, 1321, 1473, 1531, 1563
FauI CCCGC 1 cut(s) 1616
FbaI TGATCA 1 cut(s) 1326
FokI GGATG 5 cut(s) 356, 841, 1137, 1169, 1593
FriOI GRGCYC 2 cut(s) 207, 577
FspBI CTAG 1 cut(s) 449
GlaI GCGC 3 cut(s) 187, 877, 1440
GsuI CTGGAG 1 cut(s) 227
HaeII RGCGCY 2 cut(s) 189, 879
HaeIII GGCC 6 cut(s) 102, 111, 144, 596, 606, 1371
HapII CCGG 7 cut(s) 36, 141, 213, 647, 1086, 1154, 1665
HgaI GACGC 2 cut(s) 89, 425
HhaI GCGC 3 cut(s) 188, 878, 1441
Hin1I GRCGYC 2 cut(s) 186, 417
Hin1II CATG 8 cut(s) 776, 894, 1175, 1207, 1325, 1477, 1535, 1567
Hin6I GCGC 3 cut(s) 186, 876, 1439
HinP1I GCGC 3 cut(s) 186, 876, 1439
HincII GTYRAC 1 cut(s) 1479
HindII GTYRAC 1 cut(s) 1479
HpaII CCGG 7 cut(s) 36, 141, 213, 647, 1086, 1154, 1665
HphI GGTGA 1 cut(s) 806
Hpy166II GTNNAC 5 cut(s) 1338, 1390, 1479, 1661, 1702
Hpy188I TCNGA 7 cut(s) 391, 585, 682, 690, 1075, 1198, 1366
Hpy188III TCNNGA 4 cut(s) 244, 1043, 1086, 1154
Hpy8I GTNNAC 5 cut(s) 1338, 1390, 1479, 1661, 1702
Hpy99I CGWCG 1 cut(s) 155
HpyAV CCTTC 4 cut(s) 304, 685, 815, 1021
HpyCH4III ACNGT 1 cut(s) 1387
HpyCH4IV ACGT 1 cut(s) 174
HpyF3I CTNAG 6 cut(s) 390, 584, 601, 864, 1167, 1197
HpySE526I ACGT 1 cut(s) 174
Hsp92I GRCGYC 2 cut(s) 186, 417
Hsp92II CATG 8 cut(s) 776, 894, 1175, 1207, 1325, 1477, 1535, 1567
HspAI GCGC 3 cut(s) 186, 876, 1439
KasI GGCGCC 1 cut(s) 185
Kpn2I TCCGGA 2 cut(s) 1085, 1153
KpnI GGTACC 1 cut(s) 1028
Ksp22I TGATCA 1 cut(s) 1326
KspI CCGCGG 1 cut(s) 290
Kzo9I GATC 2 cut(s) 535, 1326
LguI GCTCTTC 2 cut(s) 1044, 1562
LmnI GCTCC 6 cut(s) 12, 143, 202, 496, 1088, 1626
LweI GCATC 4 cut(s) 412, 543, 1147, 1222
MaeI CTAG 1 cut(s) 449
MaeII ACGT 1 cut(s) 174
MaeIII GTNAC 3 cut(s) 193, 886, 1466
MalI GATC 2 cut(s) 537, 1328
MbiI CCGCTC 2 cut(s) 166, 1629
MboI GATC 2 cut(s) 535, 1326
MboII GAAGA 7 cut(s) 76, 347, 360, 966, 1031, 1519, 1549
MfeI CAATTG 2 cut(s) 908, 978
MhlI GDGCHC 3 cut(s) 207, 577, 1663
MlsI TGGCCA 1 cut(s) 1371
MluI ACGCGT 1 cut(s) 1681
MluNI TGGCCA 1 cut(s) 1371
Mly113I GGCGCC 1 cut(s) 186
MlyI GAGTC 5 cut(s) 325, 524, 686, 917, 1474
MmeI TCCRAC 1 cut(s) 462
Mox20I TGGCCA 1 cut(s) 1371
MroI TCCGGA 2 cut(s) 1085, 1153
MroXI GAANNNNTTC 1 cut(s) 1526
MscI TGGCCA 1 cut(s) 1371
MseI TTAA 4 cut(s) 543, 918, 1065, 1712
MslI CAYNNNNRTG 3 cut(s) 1155, 1411, 1714
Msp20I TGGCCA 1 cut(s) 1371
MspA1I CMGCKG 3 cut(s) 47, 289, 1603
MspI CCGG 7 cut(s) 36, 141, 213, 647, 1086, 1154, 1665
MunI CAATTG 2 cut(s) 908, 978
Mva1269I GAATGC 2 cut(s) 970, 1182
MvaI CCWGG 5 cut(s) 747, 1225, 1314, 1443, 1641
MvnI CGCG 2 cut(s) 289, 1683
NarI GGCGCC 1 cut(s) 186
NciI CCSGG 5 cut(s) 213, 214, 647, 1665, 1666
NcoI CCATGG 1 cut(s) 1531
NdeII GATC 2 cut(s) 535, 1326
NlaIII CATG 8 cut(s) 776, 894, 1175, 1207, 1325, 1477, 1535, 1567
NlaIV GGNNCC 6 cut(s) 40, 187, 366, 474, 1026, 1633
NotI GCGGCCGC 1 cut(s) 594
NspI RCATGY 4 cut(s) 894, 1175, 1325, 1477
PasI CCCWGGG 1 cut(s) 1640
PciI ACATGT 2 cut(s) 890, 1473
PciSI GCTCTTC 2 cut(s) 1044, 1562
PctI GAATGC 2 cut(s) 970, 1182
PdmI GAANNNNTTC 1 cut(s) 1526
PfeI GAWTC 6 cut(s) 442, 485, 500, 710, 804, 1550
PflMI CCANNNNNTGG 2 cut(s) 437, 1367
PleI GAGTC 5 cut(s) 324, 523, 685, 917, 1474
PluTI GGCGCC 1 cut(s) 189
PmaCI CACGTG 1 cut(s) 175
PmlI CACGTG 1 cut(s) 175
PpsI GAGTC 5 cut(s) 324, 523, 685, 917, 1474
Ppu21I YACGTR 1 cut(s) 175
PpuMI RGGWCCY 1 cut(s) 1163
PscI ACATGT 2 cut(s) 890, 1473
PshBI ATTAAT 1 cut(s) 918
Psp124BI GAGCTC 1 cut(s) 207
Psp5II RGGWCCY 1 cut(s) 1163
Psp6I CCWGG 5 cut(s) 745, 1223, 1312, 1441, 1639
PspCI CACGTG 1 cut(s) 175
PspGI CCWGG 5 cut(s) 745, 1223, 1312, 1441, 1639
PspN4I GGNNCC 6 cut(s) 40, 187, 366, 474, 1026, 1633
PspPI GGNCC 5 cut(s) 365, 376, 472, 631, 1163
PspPPI RGGWCCY 1 cut(s) 1163
RsaI GTAC 2 cut(s) 1026, 1290
RsaNI GTAC 2 cut(s) 1025, 1289
RseI CAYNNNNRTG 3 cut(s) 1155, 1411, 1714
SacI GAGCTC 1 cut(s) 207
SacII CCGCGG 1 cut(s) 290
SapI GCTCTTC 2 cut(s) 1044, 1562
SaqAI TTAA 4 cut(s) 543, 918, 1065, 1712
Sau3AI GATC 2 cut(s) 535, 1326
Sau96I GGNCC 5 cut(s) 365, 376, 472, 631, 1163
SchI GAGTC 5 cut(s) 325, 524, 686, 917, 1474
SduI GDGCHC 3 cut(s) 207, 577, 1663
SfaNI GCATC 4 cut(s) 412, 543, 1147, 1222
SfiI GGCCNNNNNGGCC 1 cut(s) 108
SfoI GGCGCC 1 cut(s) 187
Sfr303I CCGCGG 1 cut(s) 290
SgrBI CCGCGG 1 cut(s) 290
SinI GGWCC 5 cut(s) 365, 376, 472, 631, 1163
SmaI CCCGGG 2 cut(s) 214, 1666
SmiMI CAYNNNNRTG 3 cut(s) 1155, 1411, 1714
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
SspDI GGCGCC 1 cut(s) 185
SspMI CTAG 1 cut(s) 449
SstI GAGCTC 1 cut(s) 207
StyI CCWWGG 3 cut(s) 654, 843, 1531
TaaI ACNGT 1 cut(s) 1387
TaiI ACGT 1 cut(s) 177
TaqI TCGA 2 cut(s) 563, 1253
TatI WGTACW 1 cut(s) 1288
TfiI GAWTC 6 cut(s) 442, 485, 500, 710, 804, 1550
Tru1I TTAA 4 cut(s) 543, 918, 1065, 1712
Tru9I TTAA 4 cut(s) 543, 918, 1065, 1712
TscAI CASTG 3 cut(s) 532, 937, 1379
TspDTI ATGAA 3 cut(s) 1175, 1443, 1446
TspGWI ACGGA 3 cut(s) 139, 309, 1046
TspMI CCCGGG 2 cut(s) 212, 1664
TspRI CASTG 3 cut(s) 532, 937, 1379
Van91I CCANNNNNTGG 2 cut(s) 437, 1367
VneI GTGCAC 1 cut(s) 1659
VpaK11BI GGWCC 5 cut(s) 365, 376, 472, 631, 1163
VspI ATTAAT 1 cut(s) 918
XagI CCTNNNNNAGG 1 cut(s) 1575
XapI RAATTY 3 cut(s) 454, 464, 1102
XceI RCATGY 4 cut(s) 894, 1175, 1325, 1477
XmaI CCCGGG 2 cut(s) 212, 1664
XmnI GAANNNNTTC 1 cut(s) 1526
XspI CTAG 1 cut(s) 449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.