FvH4_1g14581

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0013946
Physical Location & Seq
Forward (+)
8166887 .. 8169136
2250 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g14581.t1

Sequence Viewer

Length: 1392 bp
ATGAAGGGATCGACGAGAGGCAGCAAGGTGTTTTCCGAAGAGGGCAGCCACTGTGGACAGAAGTTCGGCCGGTTAAAGAATTGCTCCGACGTCGAGGACCGCAGCCCTAGTCCTCCCGGTTACGACCCCGATTTATTAGCCGGAGAAGAAGCGTCACCTTCTCCATACAACAAGTCACCTTGGTCTGCACACATGAACAGCACTAATGGTTCTCCGGTCAGGGAGGCTAACTACTCCCCCAACGTCCTTATGGGCTCCCTCGTCCGCGAGGAAGGCCATATATATTCTCTTGCCGCCTCCGGTGATTTGCTTTACACGGGCTCGGACAGCAAGAACATCCGCATTTGGAAGAAGCAGAACGAATTCTCGGGCTTCAAGTCCAACTCCGGGTTGGTCAAGGCGATTATAATAGCTAATGAGAAAATATTCACGGGGCATCAAGATGGGAAGATTAGGGTATGGAGAGTGTCGACTAAGAACCCTAGCATGCATAAACGTATAGGAACCCTTCCGACTCTGAAGAACTTCATAAAGTGCTCGATGAAGCCGAGTAGCTACGTTGAGGTGCGACGGCACAGCCACAAGGTTTTGTGGATCAAACATTTCGACGCGATTTCGTGCTTGAGCATGAGCGAGGATAAGATGTTTCTCTACTCGGCGTCGTGGGATAAGACGTTTAAGGTGTGGAGGGCGTCCGATTTCAAGTGCTTGGAGTCCATCAACGCTCACGACGACGCCGTTAACGCGCTAGTGGTGGGGTTTGATGGTTTAGTTTTCACCGGTTCGGCCGACGGAACCGTCAAGATATGGAGGAGAGAGCTACAAGGGAAAGGGACCAAACATTTCTTCTCGCAAACGCTGTTGAAACAGGAATGCGCGGTAACGGCGCTCGCGGTGAACCCGGAAGCGACGATTGTGTATTGTGGATCGTCGGATGGTCTGGTTAATTTCTGGGAGCGGGAAAAGAATCTCCAACACGGCGGCGTTTTGAGAGGTCACAAGTTGGCTGTGCTATGTTTAGCGGCGGCAGGGTGTTTGGTGTTTAGTGGCTCGGCGGACATGGGGATATGCGTGTGGAGACGGTCGGAGGGGGACCATATTTGCTTATCGGTGCTGACAGGGCATACCGGACCGGTCAAGTGTTTAGCGGTGGAGAAGGATCATGAGGATACTCCGGCAGAGACGCGGTGGATTGTGTATTCTGGGAGTTTGGACAAGTCGGTGAAGATGTGGAGGGTTTCGGAGCAAGCGCCGCCTATGGTACCGAACCAGAAGCACCAGCATTACACGTCGGACGGATACTGCGTGCCGATGTTGAGCTCCGCCCCTAGCTTCGCCTCTCGCAGTAGCTTCACCTCTCGCGGTGGAAAAATGGGTTCCAGAAGACTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

464

Amino Acids

51.11

Weight (kDa)

9.13

Isoelectric Point (pI)

49.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_SCAP PF24017 72 - 325 3.3e-12 SCAP Beta-propeller
Beta-prop_WDR3_2nd PF25172 140 - 363 1.7e-15 WDR3 second beta-propeller domain
WD40_CDC20-Fz PF24807 187 - 272 2.7e-06 CDC20/Fizzy WD40 domain
WDR55 PF24796 191 - 270 9.5e-07 WDR55
WD40_Gbeta PF25391 192 - 359 4.2e-10 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 200 - 322 2.6e-17 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 201 - 271 1e-08 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 201 - 273 4.9e-08 THOC3 beta-propeller domain
Beta-prop_EML PF23409 203 - 387 1.9e-08 Echinoderm microtubule-associated protein first beta-propeller
WD40_Prp19 PF24814 204 - 322 5.4e-13 Prp19 WD40 domain
NBCH_WD40 PF20426 206 - 310 6.6e-08 Neurobeachin beta propeller domain
Beta-prop_EML_2 PF23414 207 - 367 1.2e-09 Echinoderm microtubule-associated protein second beta-propeller
WD40 PF00400 235 - 270 2.2e-06 WD domain, G-beta repeat
Beta-prop_WDR5 PF25175 285 - 414 2e-13 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 286 - 416 9.9e-17 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 289 - 427 8.7e-10 CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd PF25047 304 - 421 1.3e-10 TEP-1 second beta-propeller
WD40_Prp19 PF24814 337 - 421 7.2e-07 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 342 - 420 4.5e-07 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013946)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50390
fragaria_vesca FvH4_1g14581
malus_domestica MD00G1067400.v1.1 MD02G1159400.v1.1
prunus_persica Prupe.7G144500_v2.0.a1
pyrus_communis pycom02g12570 pycom15g23710
rosa_chinensis RchiOBHm_Chr2g0103361
rosa_laevigata RLG00000017230
rosa_multiflora Rmu_sc0001555.1_g000004 Rmu_sc0002434.1_g000011
rosa_roxburghii Rroxscaffold_2G00139690
rosa_samantha Rh2AG162600 Rh2BG169700 Rh2CG169800 Rh2DG168700
rosa_wichuraiana Rw2G012770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 407
AasI GACNNNNNNGTC 1 cut(s) 797
AatII GACGTC 1 cut(s) 93
Acc65I GGTACC 1 cut(s) 1261
AccB1I GGYRCC 1 cut(s) 1261
AccBSI CCGCTC 1 cut(s) 958
AccI GTMKAC 1 cut(s) 470
AccII CGCG 7 cut(s) 267, 611, 746, 878, 893, 1186, 1362
AclWI GGATC 4 cut(s) 16, 602, 934, 1167
AcoI YGGCCR 2 cut(s) 67, 786
AcsI RAATTY 1 cut(s) 362
AcuI CTGAAG 1 cut(s) 539
AcyI GRCGYC 4 cut(s) 90, 659, 692, 735
AfaI GTAC 1 cut(s) 1263
AfiI CCNNNNNNNGG 1 cut(s) 387
AflIII ACRYGT 1 cut(s) 1287
AgeI ACCGGT 2 cut(s) 779, 1132
AgsI TTSAA 3 cut(s) 376, 703, 865
AjiI CACGTC 1 cut(s) 1290
AjuI GAANNNNNNNTTGG 2 cut(s) 830, 862
AluBI AGCT 6 cut(s) 413, 555, 820, 1320, 1332, 1350
AluI AGCT 6 cut(s) 413, 555, 820, 1320, 1332, 1350
Alw21I GWGCWC 2 cut(s) 539, 1322
Alw26I GTCTC 2 cut(s) 1072, 1175
AlwI GGATC 4 cut(s) 16, 602, 934, 1167
AlwNI CAGNNNCTG 1 cut(s) 51
Ama87I CYCGRG 1 cut(s) 367
AoxI GGCC 3 cut(s) 67, 274, 786
ApeKI GCWGC 3 cut(s) 21, 45, 102
ApoI RAATTY 1 cut(s) 362
AsiGI ACCGGT 2 cut(s) 779, 1132
Asp700I GAANNNNTTC 3 cut(s) 362, 425, 524
Asp718I GGTACC 1 cut(s) 1261
AspLEI GCGC 4 cut(s) 748, 878, 889, 1252
AspS9I GGNCC 4 cut(s) 97, 834, 1093, 1130
AsuC2I CCSGG 3 cut(s) 117, 388, 902
AsuHPI GGTGA 7 cut(s) 147, 168, 314, 769, 907, 1234, 1345
AvaI CYCGRG 1 cut(s) 367
AvaII GGWCC 4 cut(s) 97, 834, 1093, 1130
BanI GGYRCC 1 cut(s) 1261
BanII GRGCYC 3 cut(s) 257, 323, 1322
Bbv12I GWGCWC 2 cut(s) 539, 1322
BbvI GCAGC 3 cut(s) 33, 57, 114
BccI CCATC 4 cut(s) 437, 725, 758, 929
BceAI ACGGC 4 cut(s) 587, 722, 900, 994
BciVI GTATCC 2 cut(s) 1162, 1292
BcnI CCSGG 3 cut(s) 117, 388, 902
BcoDI GTCTC 2 cut(s) 1072, 1175
BfaI CTAG 4 cut(s) 108, 483, 749, 1329
BfoI RGCGCY 2 cut(s) 890, 1253
BfuI GTATCC 2 cut(s) 1162, 1292
BisI GCNGC 8 cut(s) 22, 46, 103, 294, 982, 1023, 1026, 1253
BlsI GCNGC 8 cut(s) 23, 47, 104, 295, 983, 1024, 1027, 1254
Bme1390I CCNGG 3 cut(s) 117, 388, 902
Bme18I GGWCC 4 cut(s) 97, 834, 1093, 1130
BmeT110I CYCGRG 1 cut(s) 367
BmgBI CACGTC 1 cut(s) 1290
BmgT120I GGNCC 4 cut(s) 97, 834, 1093, 1130
BmiI GGNNCC 7 cut(s) 256, 505, 796, 835, 1094, 1263, 1378
BmrFI CCNGG 3 cut(s) 117, 388, 902
BmsI GCATC 1 cut(s) 445
BpuEI CTTGAG 1 cut(s) 643
BpuMI CCSGG 3 cut(s) 117, 388, 902
BsaHI GRCGYC 4 cut(s) 90, 659, 692, 735
BsaJI CCNNGG 1 cut(s) 179
BsaWI WCCGGW 5 cut(s) 214, 299, 779, 1127, 1132
Bsc4I CCNNNNNNNGG 1 cut(s) 387
Bse118I RCCGGY 3 cut(s) 69, 779, 1132
BseDI CCNNGG 1 cut(s) 179
BseGI GGATG 2 cut(s) 336, 940
BseLI CCNNNNNNNGG 1 cut(s) 387
BseRI GAGGAG 1 cut(s) 826
BseX3I CGGCCG 2 cut(s) 67, 786
BseXI GCAGC 3 cut(s) 33, 57, 114
BsgI GTGCAG 1 cut(s) 171
Bsh1236I CGCG 7 cut(s) 267, 611, 746, 878, 893, 1186, 1362
Bsh1285I CGRYCG 3 cut(s) 70, 789, 1085
BshFI GGCC 3 cut(s) 69, 276, 788
BshNI GGYRCC 1 cut(s) 1261
BshTI ACCGGT 2 cut(s) 779, 1132
BsiEI CGRYCG 3 cut(s) 70, 789, 1085
BsiHKAI GWGCWC 2 cut(s) 539, 1322
BsiHKCI CYCGRG 1 cut(s) 367
BslFI GGGAC 2 cut(s) 847, 1106
BslI CCNNNNNNNGG 1 cut(s) 387
BsmAI GTCTC 2 cut(s) 1072, 1175
BsmBI CGTCTC 2 cut(s) 1072, 1175
BsmFI GGGAC 2 cut(s) 847, 1106
BsmI GAATGC 1 cut(s) 878
BsnI GGCC 3 cut(s) 69, 276, 788
BsoBI CYCGRG 1 cut(s) 367
Bsp1286I GDGCHC 4 cut(s) 257, 323, 539, 1322
Bsp143I GATC 4 cut(s) 8, 594, 926, 1159
BspANI GGCC 3 cut(s) 69, 276, 788
BspFNI CGCG 7 cut(s) 267, 611, 746, 878, 893, 1186, 1362
BspHI TCATGA 1 cut(s) 1162
BspLI GGNNCC 7 cut(s) 256, 505, 796, 835, 1094, 1263, 1378
BspPI GGATC 4 cut(s) 16, 602, 934, 1167
BspT107I GGYRCC 1 cut(s) 1261
BsrBI CCGCTC 1 cut(s) 958
BsrFI RCCGGY 3 cut(s) 69, 779, 1132
BssAI RCCGGY 3 cut(s) 69, 779, 1132
BssECI CCNNGG 1 cut(s) 179
BssMI GATC 4 cut(s) 8, 594, 926, 1159
BssNI GRCGYC 4 cut(s) 90, 659, 692, 735
BssT1I CCWWGG 1 cut(s) 179
Bst4CI ACNGT 3 cut(s) 53, 799, 1083
Bst6I CTCTTC 1 cut(s) 33
BstACI GRCGYC 4 cut(s) 90, 659, 692, 735
BstC8I GCNNGC 4 cut(s) 488, 891, 1248, 1307
BstDEI CTNAG 1 cut(s) 474
BstF5I GGATG 2 cut(s) 336, 940
BstFNI CGCG 7 cut(s) 267, 611, 746, 878, 893, 1186, 1362
BstH2I RGCGCY 2 cut(s) 890, 1253
BstHHI GCGC 4 cut(s) 748, 878, 889, 1252
BstKTI GATC 4 cut(s) 11, 597, 929, 1162
BstMAI GTCTC 2 cut(s) 1072, 1175
BstMBI GATC 4 cut(s) 8, 594, 926, 1159
BstMCI CGRYCG 3 cut(s) 70, 789, 1085
BstMWI GCNNNNNNNGC 6 cut(s) 273, 327, 743, 884, 1120, 1252
BstNSI RCATGY 1 cut(s) 490
BstSCI CCNGG 3 cut(s) 115, 386, 900
BstUI CGCG 7 cut(s) 267, 611, 746, 878, 893, 1186, 1362
BstV1I GCAGC 3 cut(s) 33, 57, 114
BstZI CGGCCG 2 cut(s) 67, 786
BsuI GTATCC 2 cut(s) 1162, 1292
BsuRI GGCC 3 cut(s) 69, 276, 788
BtrI CACGTC 1 cut(s) 1290
BtsCI GGATG 2 cut(s) 336, 940
BtsIMutI CAGTG 1 cut(s) 49
Cac8I GCNNGC 4 cut(s) 488, 891, 1248, 1307
CaiI CAGNNNCTG 1 cut(s) 51
CciI TCATGA 1 cut(s) 1162
CfoI GCGC 4 cut(s) 748, 878, 889, 1252
Cfr10I RCCGGY 3 cut(s) 69, 779, 1132
Cfr13I GGNCC 4 cut(s) 97, 834, 1093, 1130
CpoI CGGWCCG 1 cut(s) 1130
CseI GACGC 6 cut(s) 141, 617, 648, 681, 743, 1192
Csp6I GTAC 1 cut(s) 1262
CspAI ACCGGT 2 cut(s) 779, 1132
CspI CGGWCCG 1 cut(s) 1130
CviAII CATG 5 cut(s) 193, 487, 628, 1060, 1163
CviQI GTAC 1 cut(s) 1262
DdeI CTNAG 1 cut(s) 474
DpnI GATC 4 cut(s) 10, 596, 928, 1161
DpnII GATC 4 cut(s) 8, 594, 926, 1159
DrdI GACNNNNNNGTC 1 cut(s) 797
DseDI GACNNNNNNGTC 1 cut(s) 797
EaeI YGGCCR 2 cut(s) 67, 786
EagI CGGCCG 2 cut(s) 67, 786
Eam1104I CTCTTC 1 cut(s) 33
EarI CTCTTC 1 cut(s) 33
EciI GGCGGA 2 cut(s) 1070, 1312
Ecl136II GAGCTC 1 cut(s) 1320
EclXI CGGCCG 2 cut(s) 67, 786
Eco130I CCWWGG 1 cut(s) 179
Eco24I GRGCYC 3 cut(s) 257, 323, 1322
Eco47I GGWCC 4 cut(s) 97, 834, 1093, 1130
Eco52I CGGCCG 2 cut(s) 67, 786
Eco53kI GAGCTC 1 cut(s) 1320
Eco57I CTGAAG 1 cut(s) 539
Eco88I CYCGRG 1 cut(s) 367
EcoICRI GAGCTC 1 cut(s) 1320
EcoRI GAATTC 1 cut(s) 362
EcoT14I CCWWGG 1 cut(s) 179
EcoT22I ATGCAT 1 cut(s) 492
EcoT38I GRGCYC 3 cut(s) 257, 323, 1322
ErhI CCWWGG 1 cut(s) 179
Esp3I CGTCTC 2 cut(s) 1072, 1175
FaeI CATG 5 cut(s) 196, 490, 631, 1063, 1166
FaqI GGGAC 2 cut(s) 847, 1106
FatI CATG 5 cut(s) 192, 486, 627, 1059, 1162
FauI CCCGC 1 cut(s) 951
FblI GTMKAC 1 cut(s) 470
Fnu4HI GCNGC 8 cut(s) 22, 46, 103, 294, 982, 1023, 1026, 1253
FokI GGATG 2 cut(s) 323, 947
FriOI GRGCYC 3 cut(s) 257, 323, 1322
Fsp4HI GCNGC 8 cut(s) 22, 46, 103, 294, 982, 1023, 1026, 1253
FspBI CTAG 4 cut(s) 108, 483, 749, 1329
GlaI GCGC 4 cut(s) 747, 877, 888, 1251
GluI GCNGC 8 cut(s) 22, 46, 103, 294, 982, 1023, 1026, 1253
HaeII RGCGCY 2 cut(s) 890, 1253
HaeIII GGCC 3 cut(s) 69, 276, 788
HgaI GACGC 6 cut(s) 141, 617, 648, 681, 743, 1192
HhaI GCGC 4 cut(s) 748, 878, 889, 1252
Hin1I GRCGYC 4 cut(s) 90, 659, 692, 735
Hin1II CATG 5 cut(s) 196, 490, 631, 1063, 1166
Hin6I GCGC 4 cut(s) 746, 876, 887, 1250
HinP1I GCGC 4 cut(s) 746, 876, 887, 1250
HincII GTYRAC 2 cut(s) 471, 742
HindII GTYRAC 2 cut(s) 471, 742
HinfI GANTC 3 cut(s) 514, 713, 967
HpaI GTTAAC 1 cut(s) 742
HphI GGTGA 7 cut(s) 147, 168, 314, 769, 907, 1234, 1345
Hpy166II GTNNAC 4 cut(s) 56, 471, 742, 898
Hpy188III TCNNGA 5 cut(s) 440, 728, 802, 1163, 1380
Hpy8I GTNNAC 4 cut(s) 56, 471, 742, 898
HpyAV CCTTC 4 cut(s) 168, 266, 518, 1150
HpyCH4III ACNGT 3 cut(s) 53, 799, 1083
HpyCH4IV ACGT 6 cut(s) 90, 243, 496, 558, 674, 1289
HpyCH4V TGCA 2 cut(s) 188, 490
HpyF10VI GCNNNNNNNGC 6 cut(s) 273, 327, 743, 884, 1120, 1252
HpyF3I CTNAG 1 cut(s) 474
HpySE526I ACGT 6 cut(s) 90, 243, 496, 558, 674, 1289
Hsp92I GRCGYC 4 cut(s) 90, 659, 692, 735
Hsp92II CATG 5 cut(s) 196, 490, 631, 1063, 1166
HspAI GCGC 4 cut(s) 746, 876, 887, 1250
KpnI GGTACC 1 cut(s) 1265
KspAI GTTAAC 1 cut(s) 742
Kzo9I GATC 4 cut(s) 8, 594, 926, 1159
LmnI GCTCC 5 cut(s) 89, 260, 955, 1243, 1325
Lsp1109I GCAGC 3 cut(s) 33, 57, 114
LweI GCATC 1 cut(s) 445
MaeI CTAG 4 cut(s) 108, 483, 749, 1329
MaeII ACGT 6 cut(s) 90, 243, 496, 558, 674, 1289
MaeIII GTNAC 5 cut(s) 119, 153, 174, 880, 995
MalI GATC 4 cut(s) 10, 596, 928, 1161
MbiI CCGCTC 1 cut(s) 958
MboI GATC 4 cut(s) 8, 594, 926, 1159
MboII GAAGA 7 cut(s) 50, 158, 361, 460, 532, 838, 1237
MhlI GDGCHC 4 cut(s) 257, 323, 539, 1322
MluCI AATT 3 cut(s) 79, 362, 946
MlyI GAGTC 2 cut(s) 508, 722
MmeI TCCRAC 7 cut(s) 111, 405, 536, 912, 997, 1065, 1272
Mph1103I ATGCAT 1 cut(s) 492
MroXI GAANNNNTTC 3 cut(s) 362, 425, 524
MseI TTAA 4 cut(s) 74, 678, 741, 945
MslI CAYNNNNRTG 1 cut(s) 441
MspR9I CCNGG 3 cut(s) 117, 388, 902
Mva1269I GAATGC 1 cut(s) 878
MvnI CGCG 7 cut(s) 267, 611, 746, 878, 893, 1186, 1362
MwoI GCNNNNNNNGC 6 cut(s) 273, 327, 743, 884, 1120, 1252
NciI CCSGG 3 cut(s) 117, 388, 902
NdeII GATC 4 cut(s) 8, 594, 926, 1159
NlaIII CATG 5 cut(s) 196, 490, 631, 1063, 1166
NlaIV GGNNCC 7 cut(s) 256, 505, 796, 835, 1094, 1263, 1378
NmeAIII GCCGAG 3 cut(s) 573, 635, 1031
NmuCI GTSAC 3 cut(s) 153, 174, 995
NsiI ATGCAT 1 cut(s) 492
NspI RCATGY 1 cut(s) 490
PaeI GCATGC 1 cut(s) 490
PagI TCATGA 1 cut(s) 1162
PcsI WCGNNNNNNNCGW 4 cut(s) 545, 729, 735, 1302
PctI GAATGC 1 cut(s) 878
PdmI GAANNNNTTC 3 cut(s) 362, 425, 524
PfeI GAWTC 1 cut(s) 967
PinAI ACCGGT 2 cut(s) 779, 1132
PkrI GCNGC 8 cut(s) 23, 47, 104, 295, 983, 1024, 1027, 1254
PleI GAGTC 2 cut(s) 508, 721
PpsI GAGTC 2 cut(s) 508, 721
PsiI TTATAA 1 cut(s) 407
Psp124BI GAGCTC 1 cut(s) 1322
PspN4I GGNNCC 7 cut(s) 256, 505, 796, 835, 1094, 1263, 1378
PspPI GGNCC 4 cut(s) 97, 834, 1093, 1130
PstNI CAGNNNCTG 1 cut(s) 51
RsaI GTAC 1 cut(s) 1263
RsaNI GTAC 1 cut(s) 1262
RseI CAYNNNNRTG 1 cut(s) 441
Rsr2I CGGWCCG 1 cut(s) 1130
RsrII CGGWCCG 1 cut(s) 1130
SacI GAGCTC 1 cut(s) 1322
SalI GTCGAC 1 cut(s) 469
SaqAI TTAA 4 cut(s) 74, 678, 741, 945
SatI GCNGC 8 cut(s) 22, 46, 103, 294, 982, 1023, 1026, 1253
Sau3AI GATC 4 cut(s) 8, 594, 926, 1159
Sau96I GGNCC 4 cut(s) 97, 834, 1093, 1130
SchI GAGTC 2 cut(s) 508, 722
ScrFI CCNGG 3 cut(s) 117, 388, 902
SduI GDGCHC 4 cut(s) 257, 323, 539, 1322
SfaNI GCATC 1 cut(s) 445
SinI GGWCC 4 cut(s) 97, 834, 1093, 1130
SmiMI CAYNNNNRTG 1 cut(s) 441
SmlI CTYRAG 1 cut(s) 622
SmoI CTYRAG 1 cut(s) 622
SphI GCATGC 1 cut(s) 490
Sse9I AATT 3 cut(s) 79, 362, 946
SspI AATATT 1 cut(s) 426
SspMI CTAG 4 cut(s) 108, 483, 749, 1329
SstI GAGCTC 1 cut(s) 1322
StyD4I CCNGG 3 cut(s) 115, 386, 900
StyI CCWWGG 1 cut(s) 179
TaaI ACNGT 3 cut(s) 53, 799, 1083
TaiI ACGT 6 cut(s) 93, 246, 499, 561, 677, 1292
TaqI TCGA 5 cut(s) 11, 93, 470, 539, 606
TasI AATT 3 cut(s) 79, 362, 946
TauI GCSGC 5 cut(s) 296, 984, 1025, 1028, 1255
TfiI GAWTC 1 cut(s) 967
Tru1I TTAA 4 cut(s) 74, 678, 741, 945
Tru9I TTAA 4 cut(s) 74, 678, 741, 945
TscAI CASTG 1 cut(s) 56
TseFI GTSAC 3 cut(s) 153, 174, 995
TseI GCWGC 3 cut(s) 21, 45, 102
Tsp45I GTSAC 3 cut(s) 153, 174, 995
TspDTI ATGAA 4 cut(s) 17, 209, 517, 557
TspGWI ACGGA 2 cut(s) 807, 1311
TspRI CASTG 1 cut(s) 56
VpaK11BI GGWCC 4 cut(s) 97, 834, 1093, 1130
XapI RAATTY 1 cut(s) 362
XceI RCATGY 1 cut(s) 490
XcmI CCANNNNNNNNNTGG 2 cut(s) 247, 388
XmiI GTMKAC 1 cut(s) 470
XmnI GAANNNNTTC 3 cut(s) 362, 425, 524
XspI CTAG 4 cut(s) 108, 483, 749, 1329
ZraI GACGTC 1 cut(s) 91
Zsp2I ATGCAT 1 cut(s) 492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.