RchiOBHm_Chr2g0103361

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0013946
Physical Location & Seq
Forward (+)
14947538 .. 14948920
1383 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47772

Sequence Viewer

Length: 1383 bp
ATGAAGGGATCGACGAGAGCCAACAAAGTGTTCTCCGAAGAGTCGACCAGCCTCCCTGGACAGAAGTTCGGCCGGTTGAAGAACTACCCCGACGGGGACGAAAGCCCTAGTCCTCCGAATTACGACCCGGACTTATTAGGCGGCGAAGACTTGTCGTCCTCTCCATTCACCAAGTCTCCTTGGTCCACGCACATGTACAACAAGGAACATACTTCTCCAGAGGCGGCCGGGGAGCCTAACTTCTCGCCGAACGTCCTCATGGGCTCCCTTGTCCGTGAGGAAGGCCATATATATTCTCTGGCCGCCTCCGGAGACTTGCTGTACACGGGGTCGGACAGCAAGAACATTAGAATCTGGAAGAAACAGAATGAATTCTCCGGTTTCAAGTCCAACAGTGGTTTGGTCAAGGCTATCATACTCGCCAACGATAAAATCTTCACAGGGCATCAAGATGGGAAGATTAGGGTATGGAGAGTTTCAACCAAGAACCCAAGCAACCACAAACGAGTCGGGACCCTTCCGACTCTGAGGAACTTATTAAGGTGCTCGATGAAGCCGAGTAGCTACGTCGAGGTGCGACGACACAGCAGCAAGGTTTTGTGGATCAAGCATTTCGACGCCATTTCGTGCTTGAGCTTGAGCGAGGACAAAACCTTGCTCTACTCGGCGTCGTGGGATAAGACGTTTAAGGTGTGGAGAGCCTCCGATTTCAAGTGCTTGGAGTCCATCAACGCTCACGACGACGCTGTTAACGCTCTGGTGGCGGGATTCGATGGCTTGGTTTTCACCGGTTCGGCTGACGGAACCGTCAAGATATGGAGAAAGGAGTTACAAGGGAAAGGGACGAAGCATTTCTTCTCGCAGACGCTGTTAAAACAGGAATGCGCGGTTACGGCGTTGGCGGTAAACCCAGAAGCGACCATTGTTTACTGTGGATCGTCGGATGGTTTGGTCAATTTCTGGGAGCGGGAAAAGAATCTCCAACACGGCGGCGTTTTGAGAGGGCACAAGTTGGCGGTTCTATGCTTAGCGGCGGCCGGGTGCTTGGTGTTCAGTGGCTCAGCCGATATGGGGATATGCGTGTGGAGACGGTCGTCGGAGGGGGACCACATTTGCTTGTCGGTGCTGACGGGGCACACCGGGCCGGTGAAGTGTTTGGCGGTGGAGACGGATAAGGAGGCTACTTCCGGGGAGACGCGATGGATAGTGTATAGCGGGAGTTTGGACAAGTCGGTGAAGATGTGGAGGGTTTCGGAGCAAGCGCCGCCGATGGTGCCGAACCAGAAGCACCAGCATTACACGTCCGATGGGTACTGCGTGCCCATGTTGAGCTCCGCCCCAAGCTTCGCCTCTCGTACATCTATGGGTTCCAGAAGAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

460

Amino Acids

50.62

Weight (kDa)

8.96

Isoelectric Point (pI)

46.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_SCAP PF24017 80 - 329 1.2e-11 SCAP Beta-propeller
Beta-prop_WDR3_2nd PF25172 132 - 367 4.2e-16 WDR3 second beta-propeller domain
WD40_CDC20-Fz PF24807 167 - 275 2.2e-06 CDC20/Fizzy WD40 domain
WD40_Gbeta PF25391 196 - 362 1.9e-10 G protein beta WD-40 repeat protein
WDR55 PF24796 202 - 273 1.3e-06 WDR55
Beta-prop_WDR5 PF25175 203 - 325 2.1e-17 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 204 - 274 6e-08 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 204 - 274 1.7e-08 WDR3 first beta-propeller domain
Beta-prop_EML PF23409 204 - 397 2.5e-08 Echinoderm microtubule-associated protein first beta-propeller
WD40_Prp19 PF24814 208 - 325 1.6e-13 Prp19 WD40 domain
NBCH_WD40 PF20426 209 - 315 1.6e-07 Neurobeachin beta propeller domain
Beta-prop_EML_2 PF23414 210 - 364 2.2e-09 Echinoderm microtubule-associated protein second beta-propeller
WD40 PF00400 238 - 273 5e-06 WD domain, G-beta repeat
Beta-prop_WDR5 PF25175 261 - 419 1.9e-16 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 289 - 420 1.5e-16 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 292 - 431 3.9e-09 CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd PF25047 307 - 425 2.3e-11 TEP-1 second beta-propeller
WD40_Prp19 PF24814 340 - 425 1.7e-06 Prp19 WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013946)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50390
fragaria_vesca FvH4_1g14581
malus_domestica MD00G1067400.v1.1 MD02G1159400.v1.1
prunus_persica Prupe.7G144500_v2.0.a1
pyrus_communis pycom02g12570 pycom15g23710
rosa_chinensis RchiOBHm_Chr2g0103361
rosa_laevigata RLG00000017230
rosa_multiflora Rmu_sc0001555.1_g000004 Rmu_sc0002434.1_g000011
rosa_roxburghii Rroxscaffold_2G00139690
rosa_samantha Rh2AG162600 Rh2BG169700 Rh2CG169800 Rh2DG168700
rosa_wichuraiana Rw2G012770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 806
AccB1I GGYRCC 1 cut(s) 1273
AccBSI CCGCTC 1 cut(s) 967
AccI GTMKAC 1 cut(s) 44
AccII CGCG 2 cut(s) 887, 1198
AccIII TCCGGA 1 cut(s) 308
AclWI GGATC 3 cut(s) 16, 611, 943
AcoI YGGCCR 4 cut(s) 70, 225, 300, 1035
AcsI RAATTY 2 cut(s) 371, 1377
AcyI GRCGYC 2 cut(s) 618, 668
AfaI GTAC 4 cut(s) 197, 323, 1313, 1357
AfiI CCNNNNNNNGG 2 cut(s) 94, 1071
AflIII ACRYGT 2 cut(s) 192, 1299
AgeI ACCGGT 1 cut(s) 788
AgsI TTSAA 4 cut(s) 79, 385, 480, 712
AhdI GACNNNNNGTC 1 cut(s) 154
AjiI CACGTC 1 cut(s) 1302
AjnI CCWGG 1 cut(s) 55
AjuI GAANNNNNNNTTGG 2 cut(s) 14, 46
AluBI AGCT 4 cut(s) 564, 636, 1332, 1344
AluI AGCT 4 cut(s) 564, 636, 1332, 1344
Alw21I GWGCWC 2 cut(s) 548, 1334
Alw26I GTCTC 5 cut(s) 180, 306, 1081, 1160, 1187
AlwI GGATC 3 cut(s) 16, 611, 943
AlwNI CAGNNNCTG 1 cut(s) 868
Aor13HI TCCGGA 1 cut(s) 308
AoxI GGCC 6 cut(s) 70, 225, 283, 300, 1035, 1142
ApeKI GCWGC 1 cut(s) 588
ApoI RAATTY 2 cut(s) 371, 1377
AsiGI ACCGGT 1 cut(s) 788
Asp700I GAANNNNTTC 2 cut(s) 371, 851
AspLEI GCGC 2 cut(s) 887, 1264
AspS9I GGNCC 4 cut(s) 183, 513, 1105, 1142
AsuC2I CCSGG 5 cut(s) 128, 229, 1039, 1141, 1189
AsuHPI GGTGA 4 cut(s) 160, 778, 1159, 1246
AvaII GGWCC 3 cut(s) 183, 513, 1105
BaeGI GKGCMC 3 cut(s) 1008, 1137, 1323
BanI GGYRCC 1 cut(s) 1273
BanII GRGCYC 2 cut(s) 266, 1334
BbsI GAAGAC 1 cut(s) 153
Bbv12I GWGCWC 2 cut(s) 548, 1334
BbvI GCAGC 1 cut(s) 600
BccI CCATC 7 cut(s) 446, 734, 767, 938, 1194, 1264, 1301
BceAI ACGGC 2 cut(s) 909, 1003
BciT130I CCWGG 1 cut(s) 57
BcnI CCSGG 5 cut(s) 128, 229, 1039, 1141, 1189
BcoDI GTCTC 5 cut(s) 180, 306, 1081, 1160, 1187
BfaI CTAG 1 cut(s) 108
BfoI RGCGCY 1 cut(s) 1265
BisI GCNGC 8 cut(s) 142, 225, 303, 589, 991, 1032, 1035, 1265
BlpI GCTNAGC 2 cut(s) 1027, 1060
BlsI GCNGC 8 cut(s) 143, 226, 304, 590, 992, 1033, 1036, 1266
Bme1390I CCNGG 6 cut(s) 57, 128, 229, 1039, 1141, 1189
Bme18I GGWCC 3 cut(s) 183, 513, 1105
BmeRI GACNNNNNGTC 1 cut(s) 154
BmgBI CACGTC 1 cut(s) 1302
BmgT120I GGNCC 4 cut(s) 183, 513, 1105, 1142
BmiI GGNNCC 8 cut(s) 234, 265, 514, 515, 805, 1106, 1275, 1369
BmrFI CCNGG 6 cut(s) 57, 128, 229, 1039, 1141, 1189
BmsI GCATC 1 cut(s) 454
BoxI GACNNNNGTC 1 cut(s) 1093
BpiI GAAGAC 1 cut(s) 153
BpmI CTGGAG 1 cut(s) 201
Bpu1102I GCTNAGC 2 cut(s) 1027, 1060
BpuEI CTTGAG 2 cut(s) 652, 658
BpuMI CCSGG 5 cut(s) 128, 229, 1039, 1141, 1189
BsaHI GRCGYC 2 cut(s) 618, 668
BsaJI CCNNGG 4 cut(s) 55, 179, 228, 1188
BsaWI WCCGGW 3 cut(s) 308, 377, 788
BsaXI ACNNNNNCTCC 2 cut(s) 160, 190
Bsc4I CCNNNNNNNGG 2 cut(s) 94, 1071
Bse118I RCCGGY 3 cut(s) 72, 788, 1144
BseAI TCCGGA 1 cut(s) 308
BseBI CCWGG 1 cut(s) 57
BseDI CCNNGG 4 cut(s) 55, 179, 228, 1188
BseGI GGATG 1 cut(s) 949
BseLI CCNNNNNNNGG 2 cut(s) 94, 1071
BseMII CTCAG 2 cut(s) 518, 1074
BseSI GKGCMC 3 cut(s) 1008, 1137, 1323
BseX3I CGGCCG 3 cut(s) 70, 225, 1035
BseXI GCAGC 1 cut(s) 600
Bsh1236I CGCG 2 cut(s) 887, 1198
Bsh1285I CGRYCG 4 cut(s) 73, 228, 1038, 1094
BshFI GGCC 6 cut(s) 72, 227, 285, 302, 1037, 1144
BshNI GGYRCC 1 cut(s) 1273
BshTI ACCGGT 1 cut(s) 788
BsiEI CGRYCG 4 cut(s) 73, 228, 1038, 1094
BsiHKAI GWGCWC 2 cut(s) 548, 1334
BslFI GGGAC 4 cut(s) 110, 526, 856, 1118
BslI CCNNNNNNNGG 2 cut(s) 94, 1071
BsmAI GTCTC 5 cut(s) 180, 306, 1081, 1160, 1187
BsmBI CGTCTC 3 cut(s) 1081, 1160, 1187
BsmFI GGGAC 4 cut(s) 110, 526, 856, 1118
BsmI GAATGC 1 cut(s) 887
BsnI GGCC 6 cut(s) 72, 227, 285, 302, 1037, 1144
Bsp1286I GDGCHC 6 cut(s) 266, 548, 1008, 1137, 1323, 1334
Bsp13I TCCGGA 1 cut(s) 308
Bsp1407I TGTACA 2 cut(s) 195, 321
Bsp143I GATC 3 cut(s) 8, 603, 935
Bsp1720I GCTNAGC 2 cut(s) 1027, 1060
BspANI GGCC 6 cut(s) 72, 227, 285, 302, 1037, 1144
BspCNI CTCAG 2 cut(s) 519, 1073
BspEI TCCGGA 1 cut(s) 308
BspFNI CGCG 2 cut(s) 887, 1198
BspLI GGNNCC 8 cut(s) 234, 265, 514, 515, 805, 1106, 1275, 1369
BspPI GGATC 3 cut(s) 16, 611, 943
BspT107I GGYRCC 1 cut(s) 1273
BsrBI CCGCTC 1 cut(s) 967
BsrFI RCCGGY 3 cut(s) 72, 788, 1144
BsrGI TGTACA 2 cut(s) 195, 321
BssAI RCCGGY 3 cut(s) 72, 788, 1144
BssECI CCNNGG 4 cut(s) 55, 179, 228, 1188
BssMI GATC 3 cut(s) 8, 603, 935
BssNI GRCGYC 2 cut(s) 618, 668
BssT1I CCWWGG 1 cut(s) 179
Bst2UI CCWGG 1 cut(s) 57
Bst4CI ACNGT 4 cut(s) 395, 808, 932, 1092
Bst6I CTCTTC 1 cut(s) 33
BstACI GRCGYC 2 cut(s) 618, 668
BstAUI TGTACA 2 cut(s) 195, 321
BstC8I GCNNGC 2 cut(s) 1260, 1319
BstDEI CTNAG 3 cut(s) 527, 1027, 1060
BstF5I GGATG 1 cut(s) 949
BstFNI CGCG 2 cut(s) 887, 1198
BstH2I RGCGCY 1 cut(s) 1265
BstHHI GCGC 2 cut(s) 887, 1264
BstKTI GATC 3 cut(s) 11, 606, 938
BstMAI GTCTC 5 cut(s) 180, 306, 1081, 1160, 1187
BstMBI GATC 3 cut(s) 8, 603, 935
BstMCI CGRYCG 4 cut(s) 73, 228, 1038, 1094
BstMWI GCNNNNNNNGC 7 cut(s) 752, 761, 893, 1132, 1141, 1264, 1273
BstNI CCWGG 1 cut(s) 57
BstNSI RCATGY 1 cut(s) 196
BstPAI GACNNNNGTC 1 cut(s) 1093
BstSCI CCNGG 6 cut(s) 55, 126, 227, 1037, 1139, 1187
BstSLI GKGCMC 3 cut(s) 1008, 1137, 1323
BstUI CGCG 2 cut(s) 887, 1198
BstV1I GCAGC 1 cut(s) 600
BstV2I GAAGAC 1 cut(s) 153
BstZI CGGCCG 3 cut(s) 70, 225, 1035
BsuRI GGCC 6 cut(s) 72, 227, 285, 302, 1037, 1144
BtgZI GCGATG 1 cut(s) 1213
BtrI CACGTC 1 cut(s) 1302
BtsCI GGATG 1 cut(s) 949
BtsIMutI CAGTG 2 cut(s) 400, 1060
Cac8I GCNNGC 2 cut(s) 1260, 1319
CaiI CAGNNNCTG 1 cut(s) 868
CfoI GCGC 2 cut(s) 887, 1264
Cfr10I RCCGGY 3 cut(s) 72, 788, 1144
Cfr13I GGNCC 4 cut(s) 183, 513, 1105, 1142
CseI GACGC 5 cut(s) 626, 657, 752, 874, 1204
Csp6I GTAC 4 cut(s) 196, 322, 1312, 1356
CspAI ACCGGT 1 cut(s) 788
CviAII CATG 3 cut(s) 193, 259, 1324
CviQI GTAC 4 cut(s) 196, 322, 1312, 1356
DdeI CTNAG 3 cut(s) 527, 1027, 1060
DpnI GATC 3 cut(s) 10, 605, 937
DpnII GATC 3 cut(s) 8, 603, 935
DrdI GACNNNNNNGTC 1 cut(s) 806
DriI GACNNNNNGTC 1 cut(s) 154
DseDI GACNNNNNNGTC 1 cut(s) 806
EaeI YGGCCR 4 cut(s) 70, 225, 300, 1035
EagI CGGCCG 3 cut(s) 70, 225, 1035
Eam1104I CTCTTC 1 cut(s) 33
Eam1105I GACNNNNNGTC 1 cut(s) 154
EarI CTCTTC 1 cut(s) 33
EciI GGCGGA 1 cut(s) 1324
Ecl136II GAGCTC 1 cut(s) 1332
EclXI CGGCCG 3 cut(s) 70, 225, 1035
Eco130I CCWWGG 1 cut(s) 179
Eco24I GRGCYC 2 cut(s) 266, 1334
Eco47I GGWCC 3 cut(s) 183, 513, 1105
Eco52I CGGCCG 3 cut(s) 70, 225, 1035
Eco53kI GAGCTC 1 cut(s) 1332
EcoICRI GAGCTC 1 cut(s) 1332
EcoO109I RGGNCCY 1 cut(s) 513
EcoRI GAATTC 1 cut(s) 371
EcoRII CCWGG 1 cut(s) 55
EcoT14I CCWWGG 1 cut(s) 179
EcoT38I GRGCYC 2 cut(s) 266, 1334
ErhI CCWWGG 1 cut(s) 179
Esp3I CGTCTC 3 cut(s) 1081, 1160, 1187
FaeI CATG 3 cut(s) 196, 262, 1327
FalI AAGNNNNNCTT 2 cut(s) 839, 871
FaqI GGGAC 4 cut(s) 110, 526, 856, 1118
FatI CATG 3 cut(s) 192, 258, 1323
FauI CCCGC 3 cut(s) 757, 960, 1208
FblI GTMKAC 1 cut(s) 44
Fnu4HI GCNGC 8 cut(s) 142, 225, 303, 589, 991, 1032, 1035, 1265
FokI GGATG 1 cut(s) 956
FriOI GRGCYC 2 cut(s) 266, 1334
Fsp4HI GCNGC 8 cut(s) 142, 225, 303, 589, 991, 1032, 1035, 1265
FspBI CTAG 1 cut(s) 108
GlaI GCGC 2 cut(s) 886, 1263
GluI GCNGC 8 cut(s) 142, 225, 303, 589, 991, 1032, 1035, 1265
GsuI CTGGAG 1 cut(s) 201
HaeII RGCGCY 1 cut(s) 1265
HaeIII GGCC 6 cut(s) 72, 227, 285, 302, 1037, 1144
HgaI GACGC 5 cut(s) 626, 657, 752, 874, 1204
HhaI GCGC 2 cut(s) 887, 1264
Hin1I GRCGYC 2 cut(s) 618, 668
Hin1II CATG 3 cut(s) 196, 262, 1327
Hin6I GCGC 2 cut(s) 885, 1262
HinP1I GCGC 2 cut(s) 885, 1262
HincII GTYRAC 2 cut(s) 45, 751
HindII GTYRAC 2 cut(s) 45, 751
HindIII AAGCTT 1 cut(s) 1342
HinfI GANTC 7 cut(s) 41, 351, 507, 523, 722, 768, 976
HpaI GTTAAC 1 cut(s) 751
HphI GGTGA 4 cut(s) 160, 778, 1159, 1246
Hpy166II GTNNAC 6 cut(s) 45, 186, 324, 751, 907, 928
Hpy188III TCNNGA 8 cut(s) 218, 309, 355, 449, 511, 737, 811, 1371
Hpy8I GTNNAC 6 cut(s) 45, 186, 324, 751, 907, 928
HpyAV CCTTC 2 cut(s) 275, 527
HpyCH4III ACNGT 4 cut(s) 395, 808, 932, 1092
HpyCH4IV ACGT 4 cut(s) 252, 567, 683, 1301
HpyF10VI GCNNNNNNNGC 7 cut(s) 752, 761, 893, 1132, 1141, 1264, 1273
HpyF3I CTNAG 3 cut(s) 527, 1027, 1060
HpySE526I ACGT 4 cut(s) 252, 567, 683, 1301
Hsp92I GRCGYC 2 cut(s) 618, 668
Hsp92II CATG 3 cut(s) 196, 262, 1327
HspAI GCGC 2 cut(s) 885, 1262
KflI GGGWCCC 1 cut(s) 513
Kpn2I TCCGGA 1 cut(s) 308
KspAI GTTAAC 1 cut(s) 751
Kzo9I GATC 3 cut(s) 8, 603, 935
LmnI GCTCC 5 cut(s) 232, 269, 964, 1255, 1337
Lsp1109I GCAGC 1 cut(s) 600
LweI GCATC 1 cut(s) 454
MaeI CTAG 1 cut(s) 108
MaeII ACGT 4 cut(s) 252, 567, 683, 1301
MaeIII GTNAC 2 cut(s) 828, 889
MalI GATC 3 cut(s) 10, 605, 937
MbiI CCGCTC 1 cut(s) 967
MboI GATC 3 cut(s) 8, 603, 935
MboII GAAGA 8 cut(s) 50, 91, 158, 370, 427, 469, 847, 1249
MhlI GDGCHC 6 cut(s) 266, 548, 1008, 1137, 1323, 1334
MluCI AATT 4 cut(s) 118, 371, 955, 1377
MlyI GAGTC 4 cut(s) 50, 516, 517, 731
MmeI TCCRAC 6 cut(s) 312, 414, 545, 921, 1006, 1077
MroI TCCGGA 1 cut(s) 308
MroXI GAANNNNTTC 2 cut(s) 371, 851
MseI TTAA 4 cut(s) 539, 687, 750, 872
MslI CAYNNNNRTG 2 cut(s) 191, 450
MspR9I CCNGG 6 cut(s) 57, 128, 229, 1039, 1141, 1189
Mva1269I GAATGC 1 cut(s) 887
MvaI CCWGG 1 cut(s) 57
MvnI CGCG 2 cut(s) 887, 1198
MwoI GCNNNNNNNGC 7 cut(s) 752, 761, 893, 1132, 1141, 1264, 1273
NciI CCSGG 5 cut(s) 128, 229, 1039, 1141, 1189
NdeII GATC 3 cut(s) 8, 603, 935
NlaIII CATG 3 cut(s) 196, 262, 1327
NlaIV GGNNCC 8 cut(s) 234, 265, 514, 515, 805, 1106, 1275, 1369
NmeAIII GCCGAG 2 cut(s) 582, 644
NspI RCATGY 1 cut(s) 196
PciI ACATGT 1 cut(s) 192
PcsI WCGNNNNNNNCGW 2 cut(s) 554, 738
PctI GAATGC 1 cut(s) 887
PdmI GAANNNNTTC 2 cut(s) 371, 851
PfeI GAWTC 3 cut(s) 351, 768, 976
PinAI ACCGGT 1 cut(s) 788
PkrI GCNGC 8 cut(s) 143, 226, 304, 590, 992, 1033, 1036, 1266
PleI GAGTC 4 cut(s) 49, 515, 517, 730
PpsI GAGTC 4 cut(s) 49, 515, 517, 730
PpuMI RGGWCCY 1 cut(s) 513
PscI ACATGT 1 cut(s) 192
PshAI GACNNNNGTC 1 cut(s) 1093
Psp124BI GAGCTC 1 cut(s) 1334
Psp5II RGGWCCY 1 cut(s) 513
Psp6I CCWGG 1 cut(s) 55
PspGI CCWGG 1 cut(s) 55
PspN4I GGNNCC 8 cut(s) 234, 265, 514, 515, 805, 1106, 1275, 1369
PspPI GGNCC 4 cut(s) 183, 513, 1105, 1142
PspPPI RGGWCCY 1 cut(s) 513
PstNI CAGNNNCTG 1 cut(s) 868
RsaI GTAC 4 cut(s) 197, 323, 1313, 1357
RsaNI GTAC 4 cut(s) 196, 322, 1312, 1356
RseI CAYNNNNRTG 2 cut(s) 191, 450
SacI GAGCTC 1 cut(s) 1334
SalI GTCGAC 1 cut(s) 43
SaqAI TTAA 4 cut(s) 539, 687, 750, 872
SatI GCNGC 8 cut(s) 142, 225, 303, 589, 991, 1032, 1035, 1265
Sau3AI GATC 3 cut(s) 8, 603, 935
Sau96I GGNCC 4 cut(s) 183, 513, 1105, 1142
SchI GAGTC 4 cut(s) 50, 516, 517, 731
ScrFI CCNGG 6 cut(s) 57, 128, 229, 1039, 1141, 1189
SduI GDGCHC 6 cut(s) 266, 548, 1008, 1137, 1323, 1334
SfaNI GCATC 1 cut(s) 454
SinI GGWCC 3 cut(s) 183, 513, 1105
SmiMI CAYNNNNRTG 2 cut(s) 191, 450
SmlI CTYRAG 2 cut(s) 631, 637
SmoI CTYRAG 2 cut(s) 631, 637
Sse9I AATT 4 cut(s) 118, 371, 955, 1377
SspMI CTAG 1 cut(s) 108
SstI GAGCTC 1 cut(s) 1334
StyD4I CCNGG 6 cut(s) 55, 126, 227, 1037, 1139, 1187
StyI CCWWGG 1 cut(s) 179
TaaI ACNGT 4 cut(s) 395, 808, 932, 1092
TaiI ACGT 4 cut(s) 255, 570, 686, 1304
TaqI TCGA 6 cut(s) 11, 44, 548, 570, 615, 771
TasI AATT 4 cut(s) 118, 371, 955, 1377
TatI WGTACW 2 cut(s) 195, 321
TauI GCSGC 7 cut(s) 144, 227, 305, 993, 1034, 1037, 1267
TfiI GAWTC 3 cut(s) 351, 768, 976
Tru1I TTAA 4 cut(s) 539, 687, 750, 872
Tru9I TTAA 4 cut(s) 539, 687, 750, 872
TscAI CASTG 2 cut(s) 400, 1060
TseI GCWGC 1 cut(s) 588
TspDTI ATGAA 3 cut(s) 17, 384, 566
TspGWI ACGGA 3 cut(s) 263, 816, 1184
TspRI CASTG 2 cut(s) 400, 1060
VpaK11BI GGWCC 3 cut(s) 183, 513, 1105
XapI RAATTY 2 cut(s) 371, 1377
XceI RCATGY 1 cut(s) 196
XcmI CCANNNNNNNNNTGG 1 cut(s) 397
XmiI GTMKAC 1 cut(s) 44
XmnI GAANNNNTTC 2 cut(s) 371, 851
XspI CTAG 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.