MD02G1159400.v1.1

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0013946
Physical Location & Seq
Forward (+)
13383803 .. 13385062
1260 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1159400.v1.1.491

Sequence Viewer

Length: 1260 bp
ATGGTGGCGGAGGAGGCCGCTTTGTCTCCTCTGAATAAGTCGCCATGGTCTTCTCATATGAACAACAATATCAACAACGACAATAATAATAATGCTTCAGATACGGCTGACGAAAACTTCTCCCCCAACGTCCTCATAGGCACGTTGGTGCCCGAGGAAGGTCACATATACTCACTGGCCACCTCTGGAGACTTGTTGTACACAGGTTCGGATAGTAAGAACATTCGGATTTGGAAGCAGCACAAAGAGTATTCGGGGTTCAAATCGAACAGTGGATTGGTTAAAACGATAATCATAGCAAGGGAGAAGATCTTCACCGGTCATCAAGACGGGAAAATTAGGGTTTGGAAGGTGTCCTACAAGAATGCAAACCACAAGCGCATAGGAACTTTACCGATGTCGAAGAATTACATAAAGTGTTCCATGAAGCCGAGTAATTACGTTGAAGTGGGAGGCAAGAGCAAAGTCCTATGGATCAAACATTTTGACTTCATCTCATGCTTGAGCTTGAGCGAAGATCAAACGTTGCTTTACTCTGCGTCGTGGGATAAAACGTTTAAGGTATGGAGGGTTTCTGATTTCAAGTGCTTGGAGTCAATCAACGCTCATGACAACGCCGTGAATGCATTGGTTGTTGGATTTGATGGGTTGGTTTTCACCGCTTCCGCAGATGGAATGGTTAAGATTTGGCGGAAAGAGCTACAAGGAAAAGGTACTAAACACTTCTTCTCACAAACGCTCTTAAAGCAGAAATACGCAATCACATCCATAGCTGTGAACACAGACGCCTCGATCATATATTGTGGCTCGTCCGACGGGCTAGTCAACTTTTGGGAACGGGAGAAGAACCTCCAACACGGTGGTGTTTTGAGAGGCCACAAACTTGCGGTTCTGTGCTTGGCCACGGCCGGGTGCTTAGTATTCAGTGGCTCCGCCGACATGGGGATTTGCGTGTGGAGATTAGGCCCCGACGGGGACCACATTTGCCTGTCAGTACTGTCAGGGCATACGGGGCCAGTGAAGTGCTTGGCTGTGGAGAGAAATCACGATCAGTTGACATCCGATGAGAAGAGGTGGATCGTGTATAGTGGGAGCTTGGATAAGTCGGTGAAGATGTGGAGGGATTCGGAACAAGCGCTGCCTATGGTGCCGAACCAGAAGCACAAGCACTACACGTCCGATGGGTATTGTGTGCCGATGTTGAGCTCGGCGCCTAGCTTTGCTTCTCGTGGAGGGGAAATGGGTTCAAGAAGATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

420

Amino Acids

46.51

Weight (kDa)

8.92

Isoelectric Point (pI)

36.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_SCAP PF24017 22 - 286 6.3e-10 SCAP Beta-propeller
Beta-prop_WDR5 PF25175 60 - 233 5.6e-15 WDR5 beta-propeller domain
WD40_Gbeta PF25391 152 - 319 7.9e-11 G protein beta WD-40 repeat protein
Beta-prop_TEP1_2nd PF25047 159 - 232 6.2e-06 TEP-1 second beta-propeller
WDR55 PF24796 160 - 230 4.7e-06 WDR55
Beta-prop_WDR3_1st PF25173 161 - 230 3e-08 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 161 - 233 4.8e-08 THOC3 beta-propeller domain
Beta-prop_EML PF23409 165 - 352 5.5e-07 Echinoderm microtubule-associated protein first beta-propeller
WD40_Prp19 PF24814 165 - 281 8e-12 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 165 - 233 4e-06 WDHD1 first WD40 domain
Beta-prop_WDR3_2nd PF25172 165 - 281 1e-10 WDR3 second beta-propeller domain
Beta-prop_EML_2 PF23414 167 - 321 1.3e-08 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_2nd PF25172 217 - 320 4.6e-06 WDR3 second beta-propeller domain
Beta-prop_WDR5 PF25175 218 - 377 3.2e-17 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 244 - 389 4.8e-09 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 245 - 377 3.4e-15 WDR3 first beta-propeller domain
Beta-prop_WDR3_2nd PF25172 246 - 379 2.9e-06 WDR3 second beta-propeller domain
WD40_Prp19 PF24814 251 - 352 1.4e-06 Prp19 WD40 domain
Beta-prop_TEP1_2nd PF25047 263 - 357 1.2e-08 TEP-1 second beta-propeller
WD40 PF00400 329 - 373 1e-05 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013946)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50390
fragaria_vesca FvH4_1g14581
malus_domestica MD00G1067400.v1.1 MD02G1159400.v1.1
prunus_persica Prupe.7G144500_v2.0.a1
pyrus_communis pycom02g12570 pycom15g23710
rosa_chinensis RchiOBHm_Chr2g0103361
rosa_laevigata RLG00000017230
rosa_multiflora Rmu_sc0001555.1_g000004 Rmu_sc0002434.1_g000011
rosa_roxburghii Rroxscaffold_2G00139690
rosa_samantha Rh2AG162600 Rh2BG169700 Rh2CG169800 Rh2DG168700
rosa_wichuraiana Rw2G012770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 821
AccB1I GGYRCC 3 cut(s) 148, 1147, 1210
AciI CCGC 7 cut(s) 8, 18, 660, 666, 691, 887, 933
AclI AACGTT 2 cut(s) 524, 554
AclWI GGATC 2 cut(s) 482, 1085
AcoI YGGCCR 3 cut(s) 177, 900, 906
AcuI CTGAAG 1 cut(s) 81
AcyI GRCGYC 2 cut(s) 786, 1211
AfaI GTAC 3 cut(s) 200, 715, 996
AfeI AGCGCT 1 cut(s) 1137
AfiI CCNNNNNNNGG 4 cut(s) 158, 909, 942, 973
AflIII ACRYGT 1 cut(s) 1173
AgeI ACCGGT 1 cut(s) 317
AgsI TTSAA 4 cut(s) 262, 446, 583, 1248
AjiI CACGTC 1 cut(s) 1176
AjuI GAANNNNNNNTTGG 2 cut(s) 260, 292
AleI CACNNNNGTG 2 cut(s) 146, 861
AluBI AGCT 6 cut(s) 507, 700, 773, 1095, 1206, 1218
AluI AGCT 6 cut(s) 507, 700, 773, 1095, 1206, 1218
Alw21I GWGCWC 1 cut(s) 1208
Alw26I GTCTC 2 cut(s) 30, 183
AlwI GGATC 2 cut(s) 482, 1085
Ama87I CYCGRG 1 cut(s) 152
Aor51HI AGCGCT 1 cut(s) 1137
AoxI GGCC 7 cut(s) 15, 177, 874, 900, 906, 964, 1013
ApeKI GCWGC 2 cut(s) 238, 1138
AsiGI ACCGGT 1 cut(s) 317
Asp700I GAANNNNTTC 1 cut(s) 311
AspLEI GCGC 3 cut(s) 381, 1138, 1213
AspS9I GGNCC 3 cut(s) 965, 976, 1013
AsuC2I CCSGG 1 cut(s) 910
AsuHPI GGTGA 3 cut(s) 307, 649, 1120
AvaI CYCGRG 1 cut(s) 152
AvaII GGWCC 1 cut(s) 976
BaeGI GKGCMC 1 cut(s) 153
BalI TGGCCA 2 cut(s) 179, 902
BanI GGYRCC 3 cut(s) 148, 1147, 1210
BanII GRGCYC 1 cut(s) 1208
BarI GAAGNNNNNNTAC 2 cut(s) 341, 373
BauI CACGAG 1 cut(s) 1227
BbsI GAAGAC 1 cut(s) 42
Bbv12I GWGCWC 1 cut(s) 1208
BbvI GCAGC 2 cut(s) 250, 1125
BccI CCATC 3 cut(s) 638, 665, 1175
BceAI ACGGC 3 cut(s) 120, 602, 921
BcnI CCSGG 1 cut(s) 910
BcoDI GTCTC 2 cut(s) 30, 183
BfaI CTAG 2 cut(s) 821, 1215
BfoI RGCGCY 2 cut(s) 1139, 1214
BglII AGATCT 1 cut(s) 309
BisI GCNGC 3 cut(s) 18, 239, 1139
BlsI GCNGC 3 cut(s) 19, 240, 1140
BmcAI AGTACT 1 cut(s) 996
Bme1390I CCNGG 1 cut(s) 910
Bme18I GGWCC 1 cut(s) 976
BmeT110I CYCGRG 1 cut(s) 152
BmgBI CACGTC 1 cut(s) 1176
BmgT120I GGNCC 3 cut(s) 965, 976, 1013
BmiI GGNNCC 7 cut(s) 150, 931, 967, 977, 1014, 1149, 1212
BmrFI CCNGG 1 cut(s) 910
BpiI GAAGAC 1 cut(s) 42
BpmI CTGGAG 1 cut(s) 207
BpuEI CTTGAG 2 cut(s) 523, 529
BpuMI CCSGG 1 cut(s) 910
BsaHI GRCGYC 2 cut(s) 786, 1211
BsaJI CCNNGG 3 cut(s) 44, 153, 903
BsaWI WCCGGW 1 cut(s) 317
Bsc4I CCNNNNNNNGG 4 cut(s) 158, 909, 942, 973
Bse118I RCCGGY 1 cut(s) 317
Bse1I ACTGG 2 cut(s) 180, 1016
BseDI CCNNGG 3 cut(s) 44, 153, 903
BseGI GGATG 2 cut(s) 764, 1058
BseLI CCNNNNNNNGG 4 cut(s) 158, 909, 942, 973
BseNI ACTGG 2 cut(s) 180, 1016
BseRI GAGGAG 2 cut(s) 18, 26
BseSI GKGCMC 1 cut(s) 153
BseX3I CGGCCG 1 cut(s) 906
BseXI GCAGC 2 cut(s) 250, 1125
Bsh1285I CGRYCG 1 cut(s) 909
BshFI GGCC 7 cut(s) 17, 179, 876, 902, 908, 966, 1015
BshNI GGYRCC 3 cut(s) 148, 1147, 1210
BshTI ACCGGT 1 cut(s) 317
BsiEI CGRYCG 1 cut(s) 909
BsiHKAI GWGCWC 1 cut(s) 1208
BsiHKCI CYCGRG 1 cut(s) 152
BsiSI CCGG 2 cut(s) 318, 909
BslFI GGGAC 1 cut(s) 989
BslI CCNNNNNNNGG 4 cut(s) 158, 909, 942, 973
BsmAI GTCTC 2 cut(s) 30, 183
BsmFI GGGAC 1 cut(s) 989
BsmI GAATGC 2 cut(s) 370, 628
BsnI GGCC 7 cut(s) 17, 179, 876, 902, 908, 966, 1015
BsoBI CYCGRG 1 cut(s) 152
Bsp1286I GDGCHC 2 cut(s) 153, 1208
Bsp1407I TGTACA 1 cut(s) 198
Bsp143I GATC 6 cut(s) 309, 474, 517, 792, 1048, 1077
Bsp19I CCATGG 1 cut(s) 44
BspACI CCGC 7 cut(s) 8, 18, 660, 666, 691, 887, 933
BspANI GGCC 7 cut(s) 17, 179, 876, 902, 908, 966, 1015
BspHI TCATGA 1 cut(s) 607
BspLI GGNNCC 7 cut(s) 150, 931, 967, 977, 1014, 1149, 1212
BspPI GGATC 2 cut(s) 482, 1085
BspT107I GGYRCC 3 cut(s) 148, 1147, 1210
BsrFI RCCGGY 1 cut(s) 317
BsrGI TGTACA 1 cut(s) 198
BsrI ACTGG 2 cut(s) 180, 1016
BssAI RCCGGY 1 cut(s) 317
BssECI CCNNGG 3 cut(s) 44, 153, 903
BssMI GATC 6 cut(s) 309, 474, 517, 792, 1048, 1077
BssNI GRCGYC 2 cut(s) 786, 1211
BssSI CACGAG 1 cut(s) 1227
BssT1I CCWWGG 1 cut(s) 44
Bst2BI CACGAG 1 cut(s) 1227
Bst4CI ACNGT 3 cut(s) 272, 860, 999
Bst6I CTCTTC 1 cut(s) 1064
BstACI GRCGYC 2 cut(s) 786, 1211
BstAUI TGTACA 1 cut(s) 198
BstDEI CTNAG 1 cut(s) 916
BstDSI CCRYGG 2 cut(s) 44, 903
BstF5I GGATG 2 cut(s) 764, 1058
BstH2I RGCGCY 2 cut(s) 1139, 1214
BstHHI GCGC 3 cut(s) 381, 1138, 1213
BstKTI GATC 6 cut(s) 312, 477, 520, 795, 1051, 1080
BstMAI GTCTC 2 cut(s) 30, 183
BstMBI GATC 6 cut(s) 309, 474, 517, 792, 1048, 1077
BstMCI CGRYCG 1 cut(s) 909
BstMWI GCNNNNNNNGC 6 cut(s) 14, 623, 697, 745, 1012, 1147
BstSCI CCNGG 1 cut(s) 908
BstSLI GKGCMC 1 cut(s) 153
BstV1I GCAGC 2 cut(s) 250, 1125
BstV2I GAAGAC 1 cut(s) 42
BstX2I RGATCY 1 cut(s) 309
BstXI CCANNNNNNTGG 1 cut(s) 860
BstYI RGATCY 1 cut(s) 309
BstZI CGGCCG 1 cut(s) 906
BsuRI GGCC 7 cut(s) 17, 179, 876, 902, 908, 966, 1015
BtgI CCRYGG 2 cut(s) 44, 903
BtrI CACGTC 1 cut(s) 1176
BtsCI GGATG 2 cut(s) 764, 1058
BtsIMutI CAGTG 4 cut(s) 173, 277, 931, 1023
CciI TCATGA 1 cut(s) 607
CfoI GCGC 3 cut(s) 381, 1138, 1213
Cfr10I RCCGGY 1 cut(s) 317
Cfr13I GGNCC 3 cut(s) 965, 976, 1013
CseI GACGC 2 cut(s) 528, 794
Csp6I GTAC 3 cut(s) 199, 714, 995
CspAI ACCGGT 1 cut(s) 317
CviAII CATG 5 cut(s) 45, 424, 498, 608, 940
CviQI GTAC 3 cut(s) 199, 714, 995
DdeI CTNAG 1 cut(s) 916
DinI GGCGCC 1 cut(s) 1212
DpnI GATC 6 cut(s) 311, 476, 519, 794, 1050, 1079
DpnII GATC 6 cut(s) 309, 474, 517, 792, 1048, 1077
DrdI GACNNNNNNGTC 1 cut(s) 821
DseDI GACNNNNNNGTC 1 cut(s) 821
EaeI YGGCCR 3 cut(s) 177, 900, 906
EagI CGGCCG 1 cut(s) 906
Eam1104I CTCTTC 1 cut(s) 1064
EarI CTCTTC 1 cut(s) 1064
EciI GGCGGA 3 cut(s) 23, 706, 922
Ecl136II GAGCTC 1 cut(s) 1206
EclXI CGGCCG 1 cut(s) 906
Eco130I CCWWGG 1 cut(s) 44
Eco24I GRGCYC 1 cut(s) 1208
Eco47I GGWCC 1 cut(s) 976
Eco47III AGCGCT 1 cut(s) 1137
Eco52I CGGCCG 1 cut(s) 906
Eco53kI GAGCTC 1 cut(s) 1206
Eco57I CTGAAG 1 cut(s) 81
Eco88I CYCGRG 1 cut(s) 152
EcoICRI GAGCTC 1 cut(s) 1206
EcoO109I RGGNCCY 1 cut(s) 965
EcoT14I CCWWGG 1 cut(s) 44
EcoT22I ATGCAT 1 cut(s) 628
EcoT38I GRGCYC 1 cut(s) 1208
EgeI GGCGCC 1 cut(s) 1212
EheI GGCGCC 1 cut(s) 1212
ErhI CCWWGG 1 cut(s) 44
FaeI CATG 5 cut(s) 48, 427, 501, 611, 943
FaqI GGGAC 1 cut(s) 989
FatI CATG 5 cut(s) 44, 423, 497, 607, 939
FauNDI CATATG 1 cut(s) 57
Fnu4HI GCNGC 3 cut(s) 18, 239, 1139
FokI GGATG 2 cut(s) 751, 1045
FriOI GRGCYC 1 cut(s) 1208
Fsp4HI GCNGC 3 cut(s) 18, 239, 1139
FspBI CTAG 2 cut(s) 821, 1215
GlaI GCGC 3 cut(s) 380, 1137, 1212
GluI GCNGC 3 cut(s) 18, 239, 1139
GsuI CTGGAG 1 cut(s) 207
HaeII RGCGCY 2 cut(s) 1139, 1214
HaeIII GGCC 7 cut(s) 17, 179, 876, 902, 908, 966, 1015
HapII CCGG 2 cut(s) 318, 909
HgaI GACGC 2 cut(s) 528, 794
HhaI GCGC 3 cut(s) 381, 1138, 1213
Hin1I GRCGYC 2 cut(s) 786, 1211
Hin1II CATG 5 cut(s) 48, 427, 501, 611, 943
Hin6I GCGC 3 cut(s) 379, 1136, 1211
HinP1I GCGC 3 cut(s) 379, 1136, 1211
HincII GTYRAC 2 cut(s) 826, 1056
HindII GTYRAC 2 cut(s) 826, 1056
HinfI GANTC 2 cut(s) 593, 1124
HpaII CCGG 2 cut(s) 318, 909
HphI GGTGA 3 cut(s) 307, 649, 1120
Hpy166II GTNNAC 4 cut(s) 201, 778, 826, 1056
Hpy188I TCNGA 9 cut(s) 33, 100, 211, 228, 577, 814, 1063, 1129, 1180
Hpy188III TCNNGA 5 cut(s) 186, 326, 608, 1046, 1248
Hpy8I GTNNAC 4 cut(s) 201, 778, 826, 1056
Hpy99I CGWCG 3 cut(s) 544, 818, 974
HpyAV CCTTC 2 cut(s) 152, 343
HpyCH4III ACNGT 3 cut(s) 272, 860, 999
HpyCH4IV ACGT 6 cut(s) 129, 143, 441, 524, 554, 1175
HpyCH4V TGCA 2 cut(s) 368, 626
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 623, 697, 745, 1012, 1147
HpyF3I CTNAG 1 cut(s) 916
HpySE526I ACGT 6 cut(s) 129, 143, 441, 524, 554, 1175
Hsp92I GRCGYC 2 cut(s) 786, 1211
Hsp92II CATG 5 cut(s) 48, 427, 501, 611, 943
HspAI GCGC 3 cut(s) 379, 1136, 1211
KasI GGCGCC 1 cut(s) 1210
Kzo9I GATC 6 cut(s) 309, 474, 517, 792, 1048, 1077
LmnI GCTCC 2 cut(s) 935, 1092
LpnPI CCDG 9 cut(s) 161, 171, 189, 331, 922, 987, 1001, 1029, 1169
Lsp1109I GCAGC 2 cut(s) 250, 1125
MaeI CTAG 2 cut(s) 821, 1215
MaeII ACGT 6 cut(s) 129, 143, 441, 524, 554, 1175
MaeIII GTNAC 1 cut(s) 161
MalI GATC 6 cut(s) 311, 476, 519, 794, 1050, 1079
MboI GATC 6 cut(s) 309, 474, 517, 792, 1048, 1077
MboII GAAGA 9 cut(s) 42, 304, 319, 415, 527, 718, 856, 1081, 1123
MflI RGATCY 1 cut(s) 309
MhlI GDGCHC 2 cut(s) 153, 1208
MlsI TGGCCA 2 cut(s) 179, 902
MluCI AATT 3 cut(s) 336, 406, 436
MluNI TGGCCA 2 cut(s) 179, 902
Mly113I GGCGCC 1 cut(s) 1211
MlyI GAGTC 1 cut(s) 602
MmeI TCCRAC 3 cut(s) 616, 837, 877
Mox20I TGGCCA 2 cut(s) 179, 902
Mph1103I ATGCAT 1 cut(s) 628
MroXI GAANNNNTTC 1 cut(s) 311
MscI TGGCCA 2 cut(s) 179, 902
MseI TTAA 4 cut(s) 282, 558, 681, 743
MslI CAYNNNNRTG 3 cut(s) 146, 773, 861
Msp20I TGGCCA 2 cut(s) 179, 902
MspI CCGG 2 cut(s) 318, 909
MspR9I CCNGG 1 cut(s) 910
Mva1269I GAATGC 2 cut(s) 370, 628
MwoI GCNNNNNNNGC 6 cut(s) 14, 623, 697, 745, 1012, 1147
NarI GGCGCC 1 cut(s) 1211
NciI CCSGG 1 cut(s) 910
NcoI CCATGG 1 cut(s) 44
NdeI CATATG 1 cut(s) 57
NdeII GATC 6 cut(s) 309, 474, 517, 792, 1048, 1077
NlaIII CATG 5 cut(s) 48, 427, 501, 611, 943
NlaIV GGNNCC 7 cut(s) 150, 931, 967, 977, 1014, 1149, 1212
NmeAIII GCCGAG 2 cut(s) 456, 1187
NmuCI GTSAC 1 cut(s) 161
NsiI ATGCAT 1 cut(s) 628
OliI CACNNNNGTG 2 cut(s) 146, 861
PagI TCATGA 1 cut(s) 607
PctI GAATGC 2 cut(s) 370, 628
PdmI GAANNNNTTC 1 cut(s) 311
PfeI GAWTC 1 cut(s) 1124
PinAI ACCGGT 1 cut(s) 317
PkrI GCNGC 3 cut(s) 19, 240, 1140
PleI GAGTC 1 cut(s) 601
PluTI GGCGCC 1 cut(s) 1214
PpsI GAGTC 1 cut(s) 601
Psp124BI GAGCTC 1 cut(s) 1208
Psp1406I AACGTT 2 cut(s) 524, 554
PspN4I GGNNCC 7 cut(s) 150, 931, 967, 977, 1014, 1149, 1212
PspPI GGNCC 3 cut(s) 965, 976, 1013
PsrI GAACNNNNNNTAC 2 cut(s) 242, 274
PsuI RGATCY 1 cut(s) 309
RsaI GTAC 3 cut(s) 200, 715, 996
RsaNI GTAC 3 cut(s) 199, 714, 995
RseI CAYNNNNRTG 3 cut(s) 146, 773, 861
SacI GAGCTC 1 cut(s) 1208
SaqAI TTAA 4 cut(s) 282, 558, 681, 743
SatI GCNGC 3 cut(s) 18, 239, 1139
Sau3AI GATC 6 cut(s) 309, 474, 517, 792, 1048, 1077
Sau96I GGNCC 3 cut(s) 965, 976, 1013
ScaI AGTACT 1 cut(s) 996
SchI GAGTC 1 cut(s) 602
ScrFI CCNGG 1 cut(s) 910
SduI GDGCHC 2 cut(s) 153, 1208
SfoI GGCGCC 1 cut(s) 1212
SinI GGWCC 1 cut(s) 976
SmiMI CAYNNNNRTG 3 cut(s) 146, 773, 861
SmlI CTYRAG 2 cut(s) 502, 508
SmoI CTYRAG 2 cut(s) 502, 508
Sse9I AATT 3 cut(s) 336, 406, 436
SsiI CCGC 7 cut(s) 8, 18, 660, 666, 691, 887, 933
SspDI GGCGCC 1 cut(s) 1210
SspMI CTAG 2 cut(s) 821, 1215
SstI GAGCTC 1 cut(s) 1208
StyD4I CCNGG 1 cut(s) 908
StyI CCWWGG 1 cut(s) 44
TaaI ACNGT 3 cut(s) 272, 860, 999
TaiI ACGT 6 cut(s) 132, 146, 444, 527, 557, 1178
TaqI TCGA 3 cut(s) 266, 401, 791
TasI AATT 3 cut(s) 336, 406, 436
TatI WGTACW 2 cut(s) 198, 994
TauI GCSGC 1 cut(s) 20
TfiI GAWTC 1 cut(s) 1124
Tru1I TTAA 4 cut(s) 282, 558, 681, 743
Tru9I TTAA 4 cut(s) 282, 558, 681, 743
TscAI CASTG 4 cut(s) 180, 277, 931, 1023
TseFI GTSAC 1 cut(s) 161
TseI GCWGC 2 cut(s) 238, 1138
Tsp45I GTSAC 1 cut(s) 161
TspDTI ATGAA 3 cut(s) 74, 440, 481
TspRI CASTG 4 cut(s) 180, 277, 931, 1023
VpaK11BI GGWCC 1 cut(s) 976
XmnI GAANNNNTTC 1 cut(s) 311
XspI CTAG 2 cut(s) 821, 1215
ZrmI AGTACT 1 cut(s) 996
Zsp2I ATGCAT 1 cut(s) 628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.