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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g18650 |
| prunus_persica | Prupe.6G212800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0109471 |
| rosa_laevigata | RLG00000017740 |
| rosa_multiflora | Rmu_sc0000332.1_g000028 |
| rosa_roxburghii | Rroxscaffold_2G00134210 |
| rosa_rugosa | Rorug02G0160400 |
| rosa_samantha | Rh2BG222700 Rh2CG214300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 637 |
| Acc36I | ACCTGC | 2 cut(s) | 637, 1012 |
| Acc65I | GGTACC | 1 cut(s) | 522 |
| AccB1I | GGYRCC | 2 cut(s) | 522, 1379 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 284 |
| AccII | CGCG | 1 cut(s) | 984 |
| AciI | CCGC | 5 cut(s) | 305, 984, 1107, 1401, 1460 |
| AclWI | GGATC | 2 cut(s) | 36, 1504 |
| AcoI | YGGCCR | 3 cut(s) | 206, 302, 331 |
| AcuI | CTGAAG | 3 cut(s) | 921, 1245, 1452 |
| AflIII | ACRYGT | 3 cut(s) | 548, 1135, 1238 |
| AgsI | TTSAA | 5 cut(s) | 156, 477, 824, 844, 1591 |
| AhlI | ACTAGT | 1 cut(s) | 53 |
| AjnI | CCWGG | 6 cut(s) | 283, 388, 532, 541, 613, 1435 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 480, 512 |
| AleI | CACNNNNGTG | 1 cut(s) | 225 |
| AluBI | AGCT | 9 cut(s) | 362, 724, 757, 941, 980, 1091, 1446, 1545, 1553 |
| AluI | AGCT | 9 cut(s) | 362, 724, 757, 941, 980, 1091, 1446, 1545, 1553 |
| Alw21I | GWGCWC | 3 cut(s) | 137, 982, 1021 |
| Alw26I | GTCTC | 3 cut(s) | 62, 854, 910 |
| AlwI | GGATC | 2 cut(s) | 36, 1504 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1004, 1109, 1553 |
| AoxI | GGCC | 5 cut(s) | 73, 206, 302, 331, 1331 |
| ApeKI | GCWGC | 5 cut(s) | 362, 430, 637, 721, 1103 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 750, 1180 |
| Asp718I | GGTACC | 1 cut(s) | 522 |
| AspLEI | GCGC | 1 cut(s) | 290 |
| AspS9I | GGNCC | 1 cut(s) | 322 |
| AsuHPI | GGTGA | 6 cut(s) | 173, 212, 267, 615, 1088, 1544 |
| AvaII | GGWCC | 1 cut(s) | 322 |
| AxyI | CCTNAGG | 1 cut(s) | 492 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1266, 1299 |
| BanI | GGYRCC | 2 cut(s) | 522, 1379 |
| BanII | GRGCYC | 1 cut(s) | 982 |
| BbsI | GAAGAC | 4 cut(s) | 828, 1083, 1251, 1605 |
| Bbv12I | GWGCWC | 3 cut(s) | 137, 982, 1021 |
| BbvI | GCAGC | 5 cut(s) | 349, 442, 624, 733, 1115 |
| BccI | CCATC | 3 cut(s) | 427, 1316, 1434 |
| BceAI | ACGGC | 2 cut(s) | 193, 346 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1205, 1239 |
| BciT130I | CCWGG | 6 cut(s) | 285, 390, 534, 543, 615, 1437 |
| BciVI | GTATCC | 2 cut(s) | 540, 1456 |
| BcoDI | GTCTC | 3 cut(s) | 62, 854, 910 |
| BcuI | ACTAGT | 1 cut(s) | 53 |
| BfaI | CTAG | 6 cut(s) | 54, 252, 642, 1100, 1542, 1645 |
| BfmI | CTRYAG | 4 cut(s) | 651, 741, 1005, 1194 |
| BfoI | RGCGCY | 1 cut(s) | 291 |
| BfuAI | ACCTGC | 2 cut(s) | 637, 1012 |
| BfuI | GTATCC | 2 cut(s) | 540, 1456 |
| BisI | GCNGC | 8 cut(s) | 305, 363, 431, 638, 722, 985, 1104, 1107 |
| BlpI | GCTNAGC | 1 cut(s) | 811 |
| BlsI | GCNGC | 8 cut(s) | 306, 364, 432, 639, 723, 986, 1105, 1108 |
| BmcAI | AGTACT | 1 cut(s) | 52 |
| Bme1390I | CCNGG | 6 cut(s) | 285, 390, 534, 543, 615, 1437 |
| Bme18I | GGWCC | 1 cut(s) | 322 |
| BmgT120I | GGNCC | 1 cut(s) | 322 |
| BmiI | GGNNCC | 4 cut(s) | 498, 524, 1177, 1381 |
| BmrFI | CCNGG | 6 cut(s) | 285, 390, 534, 543, 615, 1437 |
| BmrI | ACTGGG | 1 cut(s) | 185 |
| BmsI | GCATC | 3 cut(s) | 641, 721, 934 |
| BmuI | ACTGGG | 1 cut(s) | 185 |
| BpiI | GAAGAC | 4 cut(s) | 828, 1083, 1251, 1605 |
| BpmI | CTGGAG | 2 cut(s) | 781, 981 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1546 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 811 |
| BpuEI | CTTGAG | 2 cut(s) | 106, 855 |
| BsaI | GGTCTC | 2 cut(s) | 854, 910 |
| BsaJI | CCNNGG | 5 cut(s) | 203, 223, 341, 1328, 1435 |
| Bse1I | ACTGG | 5 cut(s) | 48, 191, 325, 998, 1179 |
| Bse21I | CCTNAGG | 1 cut(s) | 492 |
| Bse3DI | GCAATG | 2 cut(s) | 169, 398 |
| BseBI | CCWGG | 6 cut(s) | 285, 390, 534, 543, 615, 1437 |
| BseDI | CCNNGG | 5 cut(s) | 203, 223, 341, 1328, 1435 |
| BseGI | GGATG | 5 cut(s) | 100, 736, 1323, 1431, 1445 |
| BseMI | GCAATG | 2 cut(s) | 169, 398 |
| BseMII | CTCAG | 3 cut(s) | 506, 1331, 1560 |
| BseNI | ACTGG | 5 cut(s) | 48, 191, 325, 998, 1179 |
| BseRI | GAGGAG | 2 cut(s) | 207, 1532 |
| BseXI | GCAGC | 5 cut(s) | 349, 442, 624, 733, 1115 |
| BseYI | CCCAGC | 1 cut(s) | 518 |
| Bsh1236I | CGCG | 1 cut(s) | 984 |
| BshFI | GGCC | 5 cut(s) | 75, 208, 304, 333, 1333 |
| BshNI | GGYRCC | 2 cut(s) | 522, 1379 |
| BsiHKAI | GWGCWC | 3 cut(s) | 137, 982, 1021 |
| BslFI | GGGAC | 1 cut(s) | 1437 |
| BsmAI | GTCTC | 3 cut(s) | 62, 854, 910 |
| BsmFI | GGGAC | 1 cut(s) | 1437 |
| BsmI | GAATGC | 1 cut(s) | 952 |
| BsnI | GGCC | 5 cut(s) | 75, 208, 304, 333, 1333 |
| Bso31I | GGTCTC | 2 cut(s) | 854, 910 |
| Bsp1286I | GDGCHC | 3 cut(s) | 137, 982, 1021 |
| Bsp1407I | TGTACA | 2 cut(s) | 599, 1392 |
| Bsp143I | GATC | 3 cut(s) | 28, 926, 1496 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 811 |
| Bsp19I | CCATGG | 3 cut(s) | 203, 223, 1328 |
| BspACI | CCGC | 5 cut(s) | 305, 984, 1107, 1401, 1460 |
| BspANI | GGCC | 5 cut(s) | 75, 208, 304, 333, 1333 |
| BspCNI | CTCAG | 3 cut(s) | 505, 1330, 1559 |
| BspFNI | CGCG | 1 cut(s) | 984 |
| BspLI | GGNNCC | 4 cut(s) | 498, 524, 1177, 1381 |
| BspMAI | CTGCAG | 3 cut(s) | 745, 1009, 1198 |
| BspMI | ACCTGC | 2 cut(s) | 637, 1012 |
| BspPI | GGATC | 2 cut(s) | 36, 1504 |
| BspQI | GCTCTTC | 1 cut(s) | 1098 |
| BspT107I | GGYRCC | 2 cut(s) | 522, 1379 |
| BspTNI | GGTCTC | 2 cut(s) | 854, 910 |
| BsrDI | GCAATG | 2 cut(s) | 169, 398 |
| BsrGI | TGTACA | 2 cut(s) | 599, 1392 |
| BsrI | ACTGG | 5 cut(s) | 48, 191, 325, 998, 1179 |
| BssECI | CCNNGG | 5 cut(s) | 203, 223, 341, 1328, 1435 |
| BssMI | GATC | 3 cut(s) | 28, 926, 1496 |
| BssT1I | CCWWGG | 3 cut(s) | 203, 223, 1328 |
| Bst2UI | CCWGG | 6 cut(s) | 285, 390, 534, 543, 615, 1437 |
| Bst4CI | ACNGT | 5 cut(s) | 834, 903, 1026, 1489, 1625 |
| Bst6I | CTCTTC | 3 cut(s) | 11, 852, 1098 |
| BstAUI | TGTACA | 2 cut(s) | 599, 1392 |
| BstC8I | GCNNGC | 4 cut(s) | 335, 405, 982, 1194 |
| BstDEI | CTNAG | 5 cut(s) | 176, 492, 811, 1317, 1546 |
| BstDSI | CCRYGG | 3 cut(s) | 203, 223, 1328 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1067 |
| BstF5I | GGATG | 5 cut(s) | 100, 736, 1323, 1431, 1445 |
| BstFNI | CGCG | 1 cut(s) | 984 |
| BstH2I | RGCGCY | 1 cut(s) | 291 |
| BstHHI | GCGC | 1 cut(s) | 290 |
| BstKTI | GATC | 3 cut(s) | 31, 929, 1499 |
| BstMAI | GTCTC | 3 cut(s) | 62, 854, 910 |
| BstMBI | GATC | 3 cut(s) | 28, 926, 1496 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 294, 382, 413, 449, 721, 740 |
| BstNI | CCWGG | 6 cut(s) | 285, 390, 534, 543, 615, 1437 |
| BstNSI | RCATGY | 3 cut(s) | 552, 1139, 1242 |
| BstSCI | CCNGG | 6 cut(s) | 283, 388, 532, 541, 613, 1435 |
| BstSFI | CTRYAG | 4 cut(s) | 651, 741, 1005, 1194 |
| BstUI | CGCG | 1 cut(s) | 984 |
| BstV1I | GCAGC | 5 cut(s) | 349, 442, 624, 733, 1115 |
| BstV2I | GAAGAC | 4 cut(s) | 828, 1083, 1251, 1605 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1241 |
| Bsu36I | CCTNAGG | 1 cut(s) | 492 |
| BsuI | GTATCC | 2 cut(s) | 540, 1456 |
| BsuRI | GGCC | 5 cut(s) | 75, 208, 304, 333, 1333 |
| BtgI | CCRYGG | 3 cut(s) | 203, 223, 1328 |
| BtgZI | GCGATG | 1 cut(s) | 618 |
| BtsCI | GGATG | 5 cut(s) | 100, 736, 1323, 1431, 1445 |
| BtsI | GCAGTG | 2 cut(s) | 278, 954 |
| BtsIMutI | CAGTG | 3 cut(s) | 278, 954, 1494 |
| BveI | ACCTGC | 2 cut(s) | 637, 1012 |
| Cac8I | GCNNGC | 4 cut(s) | 335, 405, 982, 1194 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1004, 1109, 1553 |
| CfoI | GCGC | 1 cut(s) | 290 |
| Cfr13I | GGNCC | 1 cut(s) | 322 |
| CseI | GACGC | 1 cut(s) | 1245 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1564, 1599 |
| CviAII | CATG | 8 cut(s) | 204, 224, 515, 549, 1136, 1239, 1329, 1594 |
| DdeI | CTNAG | 5 cut(s) | 176, 492, 811, 1317, 1546 |
| DpnI | GATC | 3 cut(s) | 30, 928, 1498 |
| DpnII | GATC | 3 cut(s) | 28, 926, 1496 |
| EaeI | YGGCCR | 3 cut(s) | 206, 302, 331 |
| Eam1104I | CTCTTC | 3 cut(s) | 11, 852, 1098 |
| EarI | CTCTTC | 3 cut(s) | 11, 852, 1098 |
| Ecl136II | GAGCTC | 1 cut(s) | 980 |
| Eco130I | CCWWGG | 3 cut(s) | 203, 223, 1328 |
| Eco24I | GRGCYC | 1 cut(s) | 982 |
| Eco31I | GGTCTC | 2 cut(s) | 854, 910 |
| Eco32I | GATATC | 1 cut(s) | 395 |
| Eco47I | GGWCC | 1 cut(s) | 322 |
| Eco53kI | GAGCTC | 1 cut(s) | 980 |
| Eco57I | CTGAAG | 3 cut(s) | 921, 1245, 1452 |
| Eco81I | CCTNAGG | 1 cut(s) | 492 |
| EcoICRI | GAGCTC | 1 cut(s) | 980 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1067 |
| EcoRII | CCWGG | 6 cut(s) | 283, 388, 532, 541, 613, 1435 |
| EcoRV | GATATC | 1 cut(s) | 395 |
| EcoT14I | CCWWGG | 3 cut(s) | 203, 223, 1328 |
| EcoT38I | GRGCYC | 1 cut(s) | 982 |
| ErhI | CCWWGG | 3 cut(s) | 203, 223, 1328 |
| FaeI | CATG | 8 cut(s) | 207, 227, 518, 552, 1139, 1242, 1332, 1597 |
| FaqI | GGGAC | 1 cut(s) | 1437 |
| FatI | CATG | 8 cut(s) | 203, 223, 514, 548, 1135, 1238, 1328, 1593 |
| FauNDI | CATATG | 1 cut(s) | 604 |
| Fnu4HI | GCNGC | 8 cut(s) | 305, 363, 431, 638, 722, 985, 1104, 1107 |
| FokI | GGATG | 5 cut(s) | 107, 743, 1310, 1418, 1452 |
| FriOI | GRGCYC | 1 cut(s) | 982 |
| Fsp4HI | GCNGC | 8 cut(s) | 305, 363, 431, 638, 722, 985, 1104, 1107 |
| FspBI | CTAG | 6 cut(s) | 54, 252, 642, 1100, 1542, 1645 |
| GlaI | GCGC | 1 cut(s) | 289 |
| GluI | GCNGC | 8 cut(s) | 305, 363, 431, 638, 722, 985, 1104, 1107 |
| GsaI | CCCAGC | 1 cut(s) | 522 |
| GsuI | CTGGAG | 2 cut(s) | 781, 981 |
| HaeII | RGCGCY | 1 cut(s) | 291 |
| HaeIII | GGCC | 5 cut(s) | 75, 208, 304, 333, 1333 |
| HgaI | GACGC | 1 cut(s) | 1245 |
| HhaI | GCGC | 1 cut(s) | 290 |
| Hin1II | CATG | 8 cut(s) | 207, 227, 518, 552, 1139, 1242, 1332, 1597 |
| Hin6I | GCGC | 1 cut(s) | 288 |
| HinP1I | GCGC | 1 cut(s) | 288 |
| HincII | GTYRAC | 1 cut(s) | 772 |
| HindII | GTYRAC | 1 cut(s) | 772 |
| HinfI | GANTC | 3 cut(s) | 554, 571, 1538 |
| HphI | GGTGA | 6 cut(s) | 173, 212, 267, 615, 1088, 1544 |
| Hpy166II | GTNNAC | 4 cut(s) | 213, 600, 772, 1201 |
| Hpy188I | TCNGA | 7 cut(s) | 689, 787, 796, 1264, 1320, 1351, 1471 |
| Hpy188III | TCNNGA | 6 cut(s) | 59, 85, 252, 760, 1500, 1548 |
| Hpy8I | GTNNAC | 4 cut(s) | 213, 600, 772, 1201 |
| Hpy99I | CGWCG | 1 cut(s) | 978 |
| HpyAV | CCTTC | 3 cut(s) | 162, 180, 1601 |
| HpyCH4III | ACNGT | 5 cut(s) | 834, 903, 1026, 1489, 1625 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 294, 382, 413, 449, 721, 740 |
| HpyF3I | CTNAG | 5 cut(s) | 176, 492, 811, 1317, 1546 |
| Hsp92II | CATG | 8 cut(s) | 207, 227, 518, 552, 1139, 1242, 1332, 1597 |
| HspAI | GCGC | 1 cut(s) | 288 |
| KpnI | GGTACC | 1 cut(s) | 526 |
| Kzo9I | GATC | 3 cut(s) | 28, 926, 1496 |
| LguI | GCTCTTC | 1 cut(s) | 1098 |
| LmnI | GCTCC | 6 cut(s) | 232, 370, 449, 1443, 1550, 1636 |
| Lsp1109I | GCAGC | 5 cut(s) | 349, 442, 624, 733, 1115 |
| LweI | GCATC | 3 cut(s) | 641, 721, 934 |
| MaeI | CTAG | 6 cut(s) | 54, 252, 642, 1100, 1542, 1645 |
| MaeIII | GTNAC | 3 cut(s) | 179, 193, 1141 |
| MalI | GATC | 3 cut(s) | 30, 928, 1498 |
| MboI | GATC | 3 cut(s) | 28, 926, 1496 |
| MhlI | GDGCHC | 3 cut(s) | 137, 982, 1021 |
| MluCI | AATT | 4 cut(s) | 502, 681, 1208, 1560 |
| MmeI | TCCRAC | 2 cut(s) | 427, 652 |
| MroXI | GAANNNNTTC | 2 cut(s) | 750, 1180 |
| MseI | TTAA | 1 cut(s) | 1170 |
| MslI | CAYNNNNRTG | 2 cut(s) | 225, 1152 |
| MspA1I | CMGCKG | 3 cut(s) | 362, 941, 1109 |
| MspR9I | CCNGG | 6 cut(s) | 285, 390, 534, 543, 615, 1437 |
| Mva1269I | GAATGC | 1 cut(s) | 952 |
| MvaI | CCWGG | 6 cut(s) | 285, 390, 534, 543, 615, 1437 |
| MvnI | CGCG | 1 cut(s) | 984 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 294, 382, 413, 449, 721, 740 |
| NcoI | CCATGG | 3 cut(s) | 203, 223, 1328 |
| NdeI | CATATG | 1 cut(s) | 604 |
| NdeII | GATC | 3 cut(s) | 28, 926, 1496 |
| NlaIII | CATG | 8 cut(s) | 207, 227, 518, 552, 1139, 1242, 1332, 1597 |
| NlaIV | GGNNCC | 4 cut(s) | 498, 524, 1177, 1381 |
| NmuCI | GTSAC | 2 cut(s) | 179, 1141 |
| NspI | RCATGY | 3 cut(s) | 552, 1139, 1242 |
| OliI | CACNNNNGTG | 1 cut(s) | 225 |
| PaqCI | CACCTGC | 1 cut(s) | 637 |
| PciI | ACATGT | 3 cut(s) | 548, 1135, 1238 |
| PciSI | GCTCTTC | 1 cut(s) | 1098 |
| PctI | GAATGC | 1 cut(s) | 952 |
| PdmI | GAANNNNTTC | 2 cut(s) | 750, 1180 |
| PfeI | GAWTC | 3 cut(s) | 554, 571, 1538 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 284 |
| PkrI | GCNGC | 8 cut(s) | 306, 364, 432, 639, 723, 986, 1105, 1108 |
| PscI | ACATGT | 3 cut(s) | 548, 1135, 1238 |
| Psp124BI | GAGCTC | 1 cut(s) | 982 |
| Psp6I | CCWGG | 6 cut(s) | 283, 388, 532, 541, 613, 1435 |
| PspFI | CCCAGC | 1 cut(s) | 518 |
| PspGI | CCWGG | 6 cut(s) | 283, 388, 532, 541, 613, 1435 |
| PspN4I | GGNNCC | 4 cut(s) | 498, 524, 1177, 1381 |
| PspPI | GGNCC | 1 cut(s) | 322 |
| PstI | CTGCAG | 3 cut(s) | 745, 1009, 1198 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1004, 1109, 1553 |
| PvuII | CAGCTG | 2 cut(s) | 362, 941 |
| RseI | CAYNNNNRTG | 2 cut(s) | 225, 1152 |
| SacI | GAGCTC | 1 cut(s) | 982 |
| SapI | GCTCTTC | 1 cut(s) | 1098 |
| SaqAI | TTAA | 1 cut(s) | 1170 |
| SatI | GCNGC | 8 cut(s) | 305, 363, 431, 638, 722, 985, 1104, 1107 |
| Sau3AI | GATC | 3 cut(s) | 28, 926, 1496 |
| Sau96I | GGNCC | 1 cut(s) | 322 |
| ScaI | AGTACT | 1 cut(s) | 52 |
| ScrFI | CCNGG | 6 cut(s) | 285, 390, 534, 543, 615, 1437 |
| SduI | GDGCHC | 3 cut(s) | 137, 982, 1021 |
| SfaNI | GCATC | 3 cut(s) | 641, 721, 934 |
| SfcI | CTRYAG | 4 cut(s) | 651, 741, 1005, 1194 |
| SinI | GGWCC | 1 cut(s) | 322 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 225, 1152 |
| SmlI | CTYRAG | 2 cut(s) | 85, 870 |
| SmoI | CTYRAG | 2 cut(s) | 85, 870 |
| SpeI | ACTAGT | 1 cut(s) | 53 |
| Sse9I | AATT | 4 cut(s) | 502, 681, 1208, 1560 |
| SsiI | CCGC | 5 cut(s) | 305, 984, 1107, 1401, 1460 |
| SspMI | CTAG | 6 cut(s) | 54, 252, 642, 1100, 1542, 1645 |
| SstI | GAGCTC | 1 cut(s) | 982 |
| StyD4I | CCNGG | 6 cut(s) | 283, 388, 532, 541, 613, 1435 |
| StyI | CCWWGG | 3 cut(s) | 203, 223, 1328 |
| TaaI | ACNGT | 5 cut(s) | 834, 903, 1026, 1489, 1625 |
| TaqI | TCGA | 5 cut(s) | 422, 976, 1184, 1356, 1567 |
| TasI | AATT | 4 cut(s) | 502, 681, 1208, 1560 |
| TatI | WGTACW | 3 cut(s) | 50, 599, 1392 |
| TauI | GCSGC | 3 cut(s) | 307, 987, 1109 |
| TfiI | GAWTC | 3 cut(s) | 554, 571, 1538 |
| Tru1I | TTAA | 1 cut(s) | 1170 |
| Tru9I | TTAA | 1 cut(s) | 1170 |
| TscAI | CASTG | 3 cut(s) | 285, 954, 1494 |
| TseFI | GTSAC | 2 cut(s) | 179, 1141 |
| TseI | GCWGC | 5 cut(s) | 362, 430, 637, 721, 1103 |
| Tsp45I | GTSAC | 2 cut(s) | 179, 1141 |
| TspDTI | ATGAA | 3 cut(s) | 1283, 1470, 1551 |
| TspGWI | ACGGA | 1 cut(s) | 1188 |
| TspRI | CASTG | 3 cut(s) | 285, 954, 1494 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 284 |
| VpaK11BI | GGWCC | 1 cut(s) | 322 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1067 |
| XbaI | TCTAGA | 1 cut(s) | 251 |
| XceI | RCATGY | 3 cut(s) | 552, 1139, 1242 |
| XmnI | GAANNNNTTC | 2 cut(s) | 750, 1180 |
| XspI | CTAG | 6 cut(s) | 54, 252, 642, 1100, 1542, 1645 |
| ZrmI | AGTACT | 1 cut(s) | 52 |