Rorug02G0160400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0018777
Physical Location & Seq
Forward (+)
14295275 .. 14296900
1626 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0160400.1

Sequence Viewer

Length: 1626 bp
ATGAATATCCTGATCTGGAATTGCCAAGGTATAGTGAATCGAAAGACTCGCCGTGCTCTCAAACTTCTCATCCAGAAGCACCAGGTGCACGTTGTTTTTCTTAGTGAAACCCATTGCACCAAAGAACAACACCAATCCCTCCCTATGGTTGTGGGGCTACCAAACATTGCTAATTTTGATCGGGTTGGGCGATCTGGTGGTCTGGCTCTTCTATGGGATGATTCTATATCTGTTTCGGTACGAACGGTGAACTACTTTTTCATCGATGCTAATATGAAGGGGTCGTCTGATGTGCAGTGGCGCTTCACAGGTTTTTATGGACATCCGGAAACGGGTCAACGCCATTTATCTTGGGATCTCCTTCGTTCTTTGGCCAGACGTTCGTCGGAGAAGTGGGTGGTGGCAGGTGATTTTAATGAGATCCTAGGGTTAGGGGAGAAATCTGGAGGACGGATTCGGAGTCTACAACAAATGGATTCCTTTCGTCAAGCCCTTTTGGACTGCAATCTCGCAGATTTAGGGGCAGCACGGGGACTCTTTACTTGGAGTGACGCACACACAAAGGAAAGTCTTGACAGGGGTGTATCTACACCTGCATGGCTGTCAGAGTTTGGATTCCCTAGAGTTATTAATCTGCATCCAAGTAGATCAGATCATGTGCCTTTACTGTTGGAAGTTCGGAAGGATCAACCAGTGCATTTTCGTGGTAGACGAAGGTTCCGGTTTGAAGAGATGTGGTGCTCTCATGAGTCATTTTCACAGGCGGTGGAGGAAGCTTGGGCTATACCACAAGATGGTGGTCCGATGGTGCAGTTATGCCGGAAAGTTAAAGACACGGGGAGCTTTCTTCTAGCCTGGGATCGGACTACTTTCAAGGGACGCAGGGAAGAGTTAGAGGCTGTTCGTAGGCAAATGGATGTGCTTCTTCAGAAACCATTTGATTCTGTCGATCAGACTGAAAAGCTTCAGTTGTCCCAAAGGCTGAATGAACTGATGACTATGGATGAAACATTCTGGAGACAAAGATCTCGGGCCATTTGGCTCAAGGAAGGAGACAGAAATTCTAAATTCTTCCACCGGCGAGCCACGAATAGCAAACAGAAAAATAAAATCAAAGGTTTGTTCGATGAGAATGGGGTATGGCAGGAAACTCCGGGAGGAATTGAAGCGGTAGTGATGAGGTACTTTCAACAAATCTTTGCCCGGCAAGTACCGGACCTAGAAGCACAGGACCATGTTCTACAAACTCTGACCCCTAGAGTTACGGATAGTATGAATCAGACCTTGTTGGCGCCATATAGTGTTGATGAGGTGAAGCATGCCCTATTTCAGATGCATCCATCTAAGGCACCTGGCCCGGACGGTATGTCACCCTTCTTTTTTCAAAAATATTGGGATTTGGTAGGAATGGAAGTTAGTAGAGCAGTTATCTCTTTCTTGACTACTAAAGAGATGCCTCATGATTTAAATTTCACTCATGTGGTGCTTATCGCAAAGGTGAAAGAAGTTCAACATATGTCTCAGTTGCGTCCAATTGCCCTATGCAATGTCATTTATAAGATAGCTTCAAAAGTTTTAGCCAATCAGCTCAAATCTTTCCTCCCGGATATTATCTCCCCACAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

541

Amino Acids

62.29

Weight (kDa)

9.31

Isoelectric Point (pI)

47.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 6 - 187 7e-16 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018777)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18650
prunus_persica Prupe.6G212800_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109471
rosa_laevigata RLG00000017740
rosa_multiflora Rmu_sc0000332.1_g000028
rosa_roxburghii Rroxscaffold_2G00134210
rosa_rugosa Rorug02G0160400
rosa_samantha Rh2BG222700 Rh2CG214300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1557
AarI CACCTGC 2 cut(s) 395, 601
Acc36I ACCTGC 2 cut(s) 395, 601
AccB1I GGYRCC 2 cut(s) 1291, 1348
AccB7I CCANNNNNTGG 1 cut(s) 794
AccI GTMKAC 2 cut(s) 463, 709
AccIII TCCGGA 1 cut(s) 325
AciI CCGC 2 cut(s) 764, 1169
AclWI GGATC 4 cut(s) 363, 415, 693, 867
AcoI YGGCCR 1 cut(s) 372
AcsI RAATTY 3 cut(s) 1060, 1067, 1468
AcuI CTGAAG 2 cut(s) 911, 950
AcyI GRCGYC 1 cut(s) 1292
AdeI CACNNNGTG 1 cut(s) 85
AfaI GTAC 3 cut(s) 240, 1184, 1212
AfiI CCNNNNNNNGG 4 cut(s) 145, 332, 794, 861
AgsI TTSAA 7 cut(s) 728, 874, 1166, 1190, 1385, 1511, 1569
AhdI GACNNNNNGTC 1 cut(s) 1366
AjnI CCWGG 3 cut(s) 81, 854, 1351
AleI CACNNNNGTG 1 cut(s) 1478
AluBI AGCT 5 cut(s) 776, 843, 964, 1565, 1588
AluI AGCT 5 cut(s) 776, 843, 964, 1565, 1588
Alw21I GWGCWC 3 cut(s) 58, 90, 743
Alw26I GTCTC 3 cut(s) 1012, 1047, 1524
Alw44I GTGCAC 1 cut(s) 86
AlwI GGATC 4 cut(s) 363, 415, 693, 867
Ama87I CYCGRG 1 cut(s) 1029
Aor13HI TCCGGA 1 cut(s) 325
AoxI GGCC 3 cut(s) 372, 1032, 1354
ApaLI GTGCAC 1 cut(s) 86
ApeKI GCWGC 1 cut(s) 524
ApoI RAATTY 3 cut(s) 1060, 1067, 1468
AseI ATTAAT 1 cut(s) 630
Asp700I GAANNNNTTC 1 cut(s) 963
AspA2I CCTAGG 1 cut(s) 424
AspLEI GCGC 2 cut(s) 303, 1294
AspS9I GGNCC 5 cut(s) 800, 1032, 1216, 1231, 1355
AsuC2I CCSGG 4 cut(s) 1155, 1204, 1358, 1604
AsuHPI GGTGA 5 cut(s) 259, 419, 1324, 1362, 1510
AvaI CYCGRG 1 cut(s) 1029
AvaII GGWCC 3 cut(s) 800, 1216, 1231
AvrII CCTAGG 1 cut(s) 424
BaeGI GKGCMC 1 cut(s) 90
BalI TGGCCA 1 cut(s) 374
BanI GGYRCC 2 cut(s) 1291, 1348
Bbv12I GWGCWC 3 cut(s) 58, 90, 743
BbvI GCAGC 1 cut(s) 536
BccI CCATC 3 cut(s) 788, 799, 1348
BceAI ACGGC 1 cut(s) 36
BciT130I CCWGG 3 cut(s) 83, 856, 1353
BcnI CCSGG 4 cut(s) 1155, 1204, 1358, 1604
BcoDI GTCTC 3 cut(s) 1012, 1047, 1524
BfaI CTAG 5 cut(s) 425, 621, 851, 1220, 1257
BfoI RGCGCY 2 cut(s) 304, 1295
BfuAI ACCTGC 2 cut(s) 395, 601
BglII AGATCT 1 cut(s) 1025
BisI GCNGC 1 cut(s) 525
BlnI CCTAGG 1 cut(s) 424
BlsI GCNGC 1 cut(s) 526
Bme1390I CCNGG 7 cut(s) 83, 856, 1155, 1204, 1353, 1358, 1604
Bme18I GGWCC 3 cut(s) 800, 1216, 1231
BmeRI GACNNNNNGTC 1 cut(s) 1366
BmeT110I CYCGRG 1 cut(s) 1029
BmgT120I GGNCC 5 cut(s) 800, 1032, 1216, 1231, 1355
BmiI GGNNCC 3 cut(s) 719, 1293, 1350
BmrFI CCNGG 7 cut(s) 83, 856, 1155, 1204, 1353, 1358, 1604
BmsI GCATC 5 cut(s) 256, 646, 1323, 1345, 1443
BoxI GACNNNNGTC 1 cut(s) 382
BpmI CTGGAG 2 cut(s) 465, 1036
BpuEI CTTGAG 1 cut(s) 1028
BpuMI CCSGG 4 cut(s) 1155, 1204, 1358, 1604
Bsa29I ATCGAT 1 cut(s) 264
BsaHI GRCGYC 1 cut(s) 1292
BsaJI CCNNGG 3 cut(s) 25, 424, 855
BsaWI WCCGGW 3 cut(s) 325, 720, 1213
Bsc4I CCNNNNNNNGG 4 cut(s) 145, 332, 794, 861
Bse118I RCCGGY 1 cut(s) 1077
Bse1I ACTGG 1 cut(s) 692
Bse3DI GCAATG 3 cut(s) 112, 165, 1552
BseAI TCCGGA 1 cut(s) 325
BseBI CCWGG 3 cut(s) 83, 856, 1353
BseCI ATCGAT 1 cut(s) 264
BseDI CCNNGG 3 cut(s) 25, 424, 855
BseGI GGATG 7 cut(s) 69, 223, 322, 637, 922, 1009, 1336
BseLI CCNNNNNNNGG 4 cut(s) 145, 332, 794, 861
BseMI GCAATG 3 cut(s) 112, 165, 1552
BseMII CTCAG 1 cut(s) 1535
BseNI ACTGG 1 cut(s) 692
BseSI GKGCMC 1 cut(s) 90
BseXI GCAGC 1 cut(s) 536
BsgI GTGCAG 2 cut(s) 314, 830
BshFI GGCC 3 cut(s) 374, 1034, 1356
BshNI GGYRCC 2 cut(s) 1291, 1348
BshVI ATCGAT 1 cut(s) 264
BsiHKAI GWGCWC 3 cut(s) 58, 90, 743
BsiHKCI CYCGRG 1 cut(s) 1029
BsiSI CCGG 9 cut(s) 326, 721, 820, 1078, 1154, 1204, 1214, 1358, 1604
BslFI GGGAC 3 cut(s) 546, 891, 958
BslI CCNNNNNNNGG 4 cut(s) 145, 332, 794, 861
BsmAI GTCTC 3 cut(s) 1012, 1047, 1524
BsmFI GGGAC 3 cut(s) 546, 891, 958
BsnI GGCC 3 cut(s) 374, 1034, 1356
BsoBI CYCGRG 1 cut(s) 1029
Bsp1286I GDGCHC 3 cut(s) 58, 90, 743
Bsp13I TCCGGA 1 cut(s) 325
BspACI CCGC 2 cut(s) 764, 1169
BspANI GGCC 3 cut(s) 374, 1034, 1356
BspCNI CTCAG 1 cut(s) 1534
BspDI ATCGAT 1 cut(s) 264
BspEI TCCGGA 1 cut(s) 325
BspHI TCATGA 2 cut(s) 745, 1459
BspLI GGNNCC 3 cut(s) 719, 1293, 1350
BspMI ACCTGC 2 cut(s) 395, 601
BspPI GGATC 4 cut(s) 363, 415, 693, 867
BspQI GCTCTTC 1 cut(s) 213
BspT107I GGYRCC 2 cut(s) 1291, 1348
BsrDI GCAATG 3 cut(s) 112, 165, 1552
BsrFI RCCGGY 1 cut(s) 1077
BsrI ACTGG 1 cut(s) 692
BssAI RCCGGY 1 cut(s) 1077
BssECI CCNNGG 3 cut(s) 25, 424, 855
BssNI GRCGYC 1 cut(s) 1292
BssT1I CCWWGG 2 cut(s) 25, 424
Bst2UI CCWGG 3 cut(s) 83, 856, 1353
Bst4CI ACNGT 4 cut(s) 247, 669, 1364, 1623
Bst6I CTCTTC 3 cut(s) 213, 723, 882
BstACI GRCGYC 1 cut(s) 1292
BstAPI GCANNNNNTGC 1 cut(s) 85
BstC8I GCNNGC 2 cut(s) 1083, 1320
BstDEI CTNAG 3 cut(s) 101, 1344, 1521
BstF5I GGATG 7 cut(s) 69, 223, 322, 637, 922, 1009, 1336
BstH2I RGCGCY 2 cut(s) 304, 1295
BstHHI GCGC 2 cut(s) 303, 1294
BstMAI GTCTC 3 cut(s) 1012, 1047, 1524
BstMWI GCNNNNNNNGC 1 cut(s) 85
BstNI CCWGG 3 cut(s) 83, 856, 1353
BstNSI RCATGY 1 cut(s) 1322
BstPAI GACNNNNGTC 1 cut(s) 382
BstSCI CCNGG 7 cut(s) 81, 854, 1153, 1202, 1351, 1356, 1602
BstSLI GKGCMC 1 cut(s) 90
BstV1I GCAGC 1 cut(s) 536
BstX2I RGATCY 3 cut(s) 355, 420, 1025
BstYI RGATCY 3 cut(s) 355, 420, 1025
Bsu15I ATCGAT 1 cut(s) 264
BsuRI GGCC 3 cut(s) 374, 1034, 1356
BsuTUI ATCGAT 1 cut(s) 264
BtsCI GGATG 7 cut(s) 69, 223, 322, 637, 922, 1009, 1336
BtsI GCAGTG 1 cut(s) 302
BtsIMutI CAGTG 2 cut(s) 302, 699
BveI ACCTGC 2 cut(s) 395, 601
Cac8I GCNNGC 2 cut(s) 1083, 1320
CciI TCATGA 2 cut(s) 745, 1459
CfoI GCGC 2 cut(s) 303, 1294
Cfr10I RCCGGY 1 cut(s) 1077
Cfr13I GGNCC 5 cut(s) 800, 1032, 1216, 1231, 1355
ClaI ATCGAT 1 cut(s) 264
CseI GACGC 3 cut(s) 560, 888, 1517
CsiI ACCWGGT 1 cut(s) 81
Csp6I GTAC 3 cut(s) 239, 1183, 1211
CviAII CATG 7 cut(s) 597, 656, 746, 1235, 1319, 1460, 1478
CviQI GTAC 3 cut(s) 239, 1183, 1211
DdeI CTNAG 3 cut(s) 101, 1344, 1521
DinI GGCGCC 1 cut(s) 1293
DraI TTTAAA 1 cut(s) 1467
DraIII CACNNNGTG 1 cut(s) 85
DriI GACNNNNNGTC 1 cut(s) 1366
EaeI YGGCCR 1 cut(s) 372
Eam1104I CTCTTC 3 cut(s) 213, 723, 882
Eam1105I GACNNNNNGTC 1 cut(s) 1366
EarI CTCTTC 3 cut(s) 213, 723, 882
Eco130I CCWWGG 2 cut(s) 25, 424
Eco47I GGWCC 3 cut(s) 800, 1216, 1231
Eco57I CTGAAG 2 cut(s) 911, 950
Eco88I CYCGRG 1 cut(s) 1029
EcoRII CCWGG 3 cut(s) 81, 854, 1351
EcoT14I CCWWGG 2 cut(s) 25, 424
EcoT22I ATGCAT 1 cut(s) 1338
EgeI GGCGCC 1 cut(s) 1293
EheI GGCGCC 1 cut(s) 1293
ErhI CCWWGG 2 cut(s) 25, 424
FaeI CATG 7 cut(s) 600, 659, 749, 1238, 1322, 1463, 1481
FaqI GGGAC 3 cut(s) 546, 891, 958
FatI CATG 7 cut(s) 596, 655, 745, 1234, 1318, 1459, 1477
FauNDI CATATG 1 cut(s) 1515
FblI GTMKAC 2 cut(s) 463, 709
Fnu4HI GCNGC 1 cut(s) 525
FokI GGATG 7 cut(s) 56, 230, 309, 624, 929, 1016, 1323
Fsp4HI GCNGC 1 cut(s) 525
FspBI CTAG 5 cut(s) 425, 621, 851, 1220, 1257
GlaI GCGC 2 cut(s) 302, 1293
GluI GCNGC 1 cut(s) 525
GsuI CTGGAG 2 cut(s) 465, 1036
HaeII RGCGCY 2 cut(s) 304, 1295
HaeIII GGCC 3 cut(s) 374, 1034, 1356
HapII CCGG 9 cut(s) 326, 721, 820, 1078, 1154, 1204, 1214, 1358, 1604
HgaI GACGC 3 cut(s) 560, 888, 1517
HhaI GCGC 2 cut(s) 303, 1294
Hin1I GRCGYC 1 cut(s) 1292
Hin1II CATG 7 cut(s) 600, 659, 749, 1238, 1322, 1463, 1481
Hin6I GCGC 2 cut(s) 301, 1292
HinP1I GCGC 2 cut(s) 301, 1292
HincII GTYRAC 1 cut(s) 338
HindII GTYRAC 1 cut(s) 338
HindIII AAGCTT 2 cut(s) 774, 962
HpaII CCGG 9 cut(s) 326, 721, 820, 1078, 1154, 1204, 1214, 1358, 1604
HphI GGTGA 5 cut(s) 259, 419, 1324, 1362, 1510
Hpy166II GTNNAC 5 cut(s) 88, 250, 338, 464, 710
Hpy8I GTNNAC 5 cut(s) 88, 250, 338, 464, 710
Hpy99I CGWCG 1 cut(s) 388
HpyAV CCTTC 6 cut(s) 271, 371, 676, 708, 1043, 1384
HpyCH4III ACNGT 4 cut(s) 247, 669, 1364, 1623
HpyCH4IV ACGT 2 cut(s) 90, 379
HpyF10VI GCNNNNNNNGC 1 cut(s) 85
HpyF3I CTNAG 3 cut(s) 101, 1344, 1521
HpySE526I ACGT 2 cut(s) 90, 379
Hsp92I GRCGYC 1 cut(s) 1292
Hsp92II CATG 7 cut(s) 600, 659, 749, 1238, 1322, 1463, 1481
HspAI GCGC 2 cut(s) 301, 1292
KasI GGCGCC 1 cut(s) 1291
Kpn2I TCCGGA 1 cut(s) 325
LguI GCTCTTC 1 cut(s) 213
LmnI GCTCC 1 cut(s) 840
Lsp1109I GCAGC 1 cut(s) 536
LweI GCATC 5 cut(s) 256, 646, 1323, 1345, 1443
MabI ACCWGGT 1 cut(s) 81
MaeI CTAG 5 cut(s) 425, 621, 851, 1220, 1257
MaeII ACGT 2 cut(s) 90, 379
MaeIII GTNAC 3 cut(s) 548, 1261, 1368
MboII GAAGA 6 cut(s) 200, 740, 839, 899, 917, 1063
MfeI CAATTG 1 cut(s) 1533
MflI RGATCY 3 cut(s) 355, 420, 1025
MhlI GDGCHC 3 cut(s) 58, 90, 743
MlsI TGGCCA 1 cut(s) 374
MluCI AATT 7 cut(s) 19, 172, 1060, 1067, 1161, 1468, 1533
MluNI TGGCCA 1 cut(s) 374
Mly113I GGCGCC 1 cut(s) 1292
MlyI GAGTC 4 cut(s) 40, 469, 528, 758
MmeI TCCRAC 2 cut(s) 366, 651
MnlI CCTC 9 cut(s) 149, 440, 763, 889, 1151, 1173, 1303, 1467, 1610
Mox20I TGGCCA 1 cut(s) 374
Mph1103I ATGCAT 1 cut(s) 1338
MroI TCCGGA 1 cut(s) 325
MroXI GAANNNNTTC 1 cut(s) 963
MscI TGGCCA 1 cut(s) 374
MseI TTAA 4 cut(s) 414, 630, 828, 1466
MslI CAYNNNNRTG 3 cut(s) 595, 702, 1478
Msp20I TGGCCA 1 cut(s) 374
MspI CCGG 9 cut(s) 326, 721, 820, 1078, 1154, 1204, 1214, 1358, 1604
MspR9I CCNGG 7 cut(s) 83, 856, 1155, 1204, 1353, 1358, 1604
MunI CAATTG 1 cut(s) 1533
MvaI CCWGG 3 cut(s) 83, 856, 1353
MwoI GCNNNNNNNGC 1 cut(s) 85
NarI GGCGCC 1 cut(s) 1292
NciI CCSGG 4 cut(s) 1155, 1204, 1358, 1604
NdeI CATATG 1 cut(s) 1515
NlaIII CATG 7 cut(s) 600, 659, 749, 1238, 1322, 1463, 1481
NlaIV GGNNCC 3 cut(s) 719, 1293, 1350
NmuCI GTSAC 2 cut(s) 548, 1368
NsiI ATGCAT 1 cut(s) 1338
NspI RCATGY 1 cut(s) 1322
OliI CACNNNNGTG 1 cut(s) 1478
PaeI GCATGC 1 cut(s) 1322
PagI TCATGA 2 cut(s) 745, 1459
PaqCI CACCTGC 2 cut(s) 395, 601
PciSI GCTCTTC 1 cut(s) 213
PcsI WCGNNNNNNNCGW 2 cut(s) 187, 709
PdmI GAANNNNTTC 1 cut(s) 963
PfeI GAWTC 7 cut(s) 37, 221, 454, 476, 615, 941, 1276
PflMI CCANNNNNTGG 1 cut(s) 794
PfoI TCCNGGA 2 cut(s) 1153, 1602
PkrI GCNGC 1 cut(s) 526
PleI GAGTC 4 cut(s) 40, 468, 528, 757
PluTI GGCGCC 1 cut(s) 1295
PpsI GAGTC 4 cut(s) 40, 468, 528, 757
PshAI GACNNNNGTC 1 cut(s) 382
PshBI ATTAAT 1 cut(s) 630
PsiI TTATAA 1 cut(s) 1557
Psp6I CCWGG 3 cut(s) 81, 854, 1351
PspGI CCWGG 3 cut(s) 81, 854, 1351
PspN4I GGNNCC 3 cut(s) 719, 1293, 1350
PspPI GGNCC 5 cut(s) 800, 1032, 1216, 1231, 1355
PsuI RGATCY 3 cut(s) 355, 420, 1025
RsaI GTAC 3 cut(s) 240, 1184, 1212
RsaNI GTAC 3 cut(s) 239, 1183, 1211
RseI CAYNNNNRTG 3 cut(s) 595, 702, 1478
SapI GCTCTTC 1 cut(s) 213
SaqAI TTAA 4 cut(s) 414, 630, 828, 1466
SatI GCNGC 1 cut(s) 525
Sau96I GGNCC 5 cut(s) 800, 1032, 1216, 1231, 1355
SchI GAGTC 4 cut(s) 40, 469, 528, 758
ScrFI CCNGG 7 cut(s) 83, 856, 1155, 1204, 1353, 1358, 1604
SduI GDGCHC 3 cut(s) 58, 90, 743
SexAI ACCWGGT 1 cut(s) 81
SfaNI GCATC 5 cut(s) 256, 646, 1323, 1345, 1443
SfoI GGCGCC 1 cut(s) 1293
SgrAI CRCCGGYG 1 cut(s) 1077
SinI GGWCC 3 cut(s) 800, 1216, 1231
SmiI ATTTAAAT 1 cut(s) 1467
SmiMI CAYNNNNRTG 3 cut(s) 595, 702, 1478
SmlI CTYRAG 1 cut(s) 1043
SmoI CTYRAG 1 cut(s) 1043
SphI GCATGC 1 cut(s) 1322
Sse9I AATT 7 cut(s) 19, 172, 1060, 1067, 1161, 1468, 1533
SsiI CCGC 2 cut(s) 764, 1169
SspDI GGCGCC 1 cut(s) 1291
SspI AATATT 1 cut(s) 1391
SspMI CTAG 5 cut(s) 425, 621, 851, 1220, 1257
StyD4I CCNGG 7 cut(s) 81, 854, 1153, 1202, 1351, 1356, 1602
StyI CCWWGG 2 cut(s) 25, 424
SwaI ATTTAAAT 1 cut(s) 1467
TaaI ACNGT 4 cut(s) 247, 669, 1364, 1623
TaiI ACGT 2 cut(s) 93, 382
TaqI TCGA 4 cut(s) 40, 264, 948, 1125
TasI AATT 7 cut(s) 19, 172, 1060, 1067, 1161, 1468, 1533
TfiI GAWTC 7 cut(s) 37, 221, 454, 476, 615, 941, 1276
Tru1I TTAA 4 cut(s) 414, 630, 828, 1466
Tru9I TTAA 4 cut(s) 414, 630, 828, 1466
TscAI CASTG 2 cut(s) 302, 699
TseFI GTSAC 2 cut(s) 548, 1368
TseI GCWGC 1 cut(s) 524
Tsp45I GTSAC 2 cut(s) 548, 1368
TspDTI ATGAA 6 cut(s) 17, 250, 290, 1002, 1020, 1289
TspGWI ACGGA 2 cut(s) 466, 1280
TspRI CASTG 2 cut(s) 302, 699
Van91I CCANNNNNTGG 1 cut(s) 794
VneI GTGCAC 1 cut(s) 86
VpaK11BI GGWCC 3 cut(s) 800, 1216, 1231
VspI ATTAAT 1 cut(s) 630
XapI RAATTY 3 cut(s) 1060, 1067, 1468
XceI RCATGY 1 cut(s) 1322
XmaJI CCTAGG 1 cut(s) 424
XmiI GTMKAC 2 cut(s) 463, 709
XmnI GAANNNNTTC 1 cut(s) 963
XspI CTAG 5 cut(s) 425, 621, 851, 1220, 1257
Zsp2I ATGCAT 1 cut(s) 1338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.