U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G65500 AT5G65500 |
| fragaria_vesca | FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 |
| malus_domestica | MD15G1311300.v1.1 |
| prunus_persica | Prupe.6G202700_v2.0.a1 Prupe.6G202700_v2.0.a1 |
| pyrus_communis | pycom15g27510 |
| rosa_chinensis | RchiOBHm_Chr2g0111061 |
| rosa_laevigata | RLG00000017862 |
| rosa_multiflora | Rmu_sc0003994.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00132720 |
| rosa_rugosa | Rorug02G0170800 |
| rosa_samantha | Rh2AG223300 Rh2BG235200 Rh2CG226700 Rh2DG231000 |
| rosa_wichuraiana | Rw2G017230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 251 |
| AccII | CGCG | 1 cut(s) | 1848 |
| AciI | CCGC | 6 cut(s) | 1198, 1399, 1676, 1794, 2160, 2225 |
| AclI | AACGTT | 1 cut(s) | 1348 |
| AclWI | GGATC | 1 cut(s) | 1423 |
| AcoI | YGGCCR | 4 cut(s) | 271, 1152, 2052, 2226 |
| AcsI | RAATTY | 2 cut(s) | 91, 1063 |
| AcuI | CTGAAG | 2 cut(s) | 101, 2102 |
| AfaI | GTAC | 3 cut(s) | 257, 1304, 1645 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 72, 165, 280, 1653, 1675 |
| AflIII | ACRYGT | 1 cut(s) | 2218 |
| AhlI | ACTAGT | 1 cut(s) | 496 |
| AjnI | CCWGG | 4 cut(s) | 273, 872, 1363, 1905 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1592, 1624 |
| Alw21I | GWGCWC | 2 cut(s) | 1092, 2073 |
| Alw26I | GTCTC | 3 cut(s) | 343, 1578, 2246 |
| AlwI | GGATC | 1 cut(s) | 1423 |
| Ama87I | CYCGRG | 2 cut(s) | 1164, 1690 |
| AoxI | GGCC | 9 cut(s) | 271, 876, 909, 1152, 1396, 1903, 1967, 2052, 2226 |
| ApeKI | GCWGC | 6 cut(s) | 247, 431, 806, 1078, 1201, 1928 |
| ApoI | RAATTY | 2 cut(s) | 91, 1063 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1121, 1153 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 146, 1017 |
| AspLEI | GCGC | 2 cut(s) | 252, 1850 |
| AspS9I | GGNCC | 6 cut(s) | 528, 876, 909, 1921, 2030, 2379 |
| AsuC2I | CCSGG | 3 cut(s) | 1165, 1166, 1996 |
| AsuHPI | GGTGA | 3 cut(s) | 289, 1489, 2105 |
| AsuII | TTCGAA | 1 cut(s) | 140 |
| AvaI | CYCGRG | 2 cut(s) | 1164, 1690 |
| AvaII | GGWCC | 4 cut(s) | 528, 1921, 2030, 2379 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1648, 1681 |
| BalI | TGGCCA | 3 cut(s) | 273, 1154, 2054 |
| BanII | GRGCYC | 2 cut(s) | 1092, 2073 |
| BbsI | GAAGAC | 3 cut(s) | 398, 499, 819 |
| Bbv12I | GWGCWC | 2 cut(s) | 1092, 2073 |
| BbvCI | CCTCAGC | 3 cut(s) | 619, 936, 1311 |
| BbvI | GCAGC | 6 cut(s) | 234, 443, 793, 1065, 1213, 1940 |
| BccI | CCATC | 9 cut(s) | 47, 629, 1144, 1168, 1948, 2056, 2125, 2129, 2225 |
| BciT130I | CCWGG | 4 cut(s) | 275, 874, 1365, 1907 |
| BciVI | GTATCC | 1 cut(s) | 1676 |
| BclI | TGATCA | 1 cut(s) | 541 |
| BcnI | CCSGG | 3 cut(s) | 1165, 1166, 1996 |
| BcoDI | GTCTC | 3 cut(s) | 343, 1578, 2246 |
| BcuI | ACTAGT | 1 cut(s) | 496 |
| BfmI | CTRYAG | 2 cut(s) | 642, 807 |
| BfuI | GTATCC | 1 cut(s) | 1676 |
| BisI | GCNGC | 9 cut(s) | 248, 432, 807, 1079, 1199, 1202, 1399, 1929, 2226 |
| BlpI | GCTNAGC | 2 cut(s) | 1716, 1811 |
| BlsI | GCNGC | 9 cut(s) | 249, 433, 808, 1080, 1200, 1203, 1400, 1930, 2227 |
| BmcAI | AGTACT | 1 cut(s) | 257 |
| Bme1390I | CCNGG | 7 cut(s) | 275, 874, 1165, 1166, 1365, 1907, 1996 |
| Bme18I | GGWCC | 4 cut(s) | 528, 1921, 2030, 2379 |
| BmeT110I | CYCGRG | 2 cut(s) | 1164, 1690 |
| BmgT120I | GGNCC | 6 cut(s) | 528, 876, 909, 1921, 2030, 2379 |
| BmiI | GGNNCC | 2 cut(s) | 529, 2381 |
| BmrFI | CCNGG | 7 cut(s) | 275, 874, 1165, 1166, 1365, 1907, 1996 |
| BmsI | GCATC | 3 cut(s) | 1857, 1879, 2086 |
| BpiI | GAAGAC | 3 cut(s) | 398, 499, 819 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1673, 1705 |
| BpmI | CTGGAG | 1 cut(s) | 1062 |
| Bpu10I | CCTNAGC | 4 cut(s) | 619, 936, 1311, 1541 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1716, 1811 |
| Bpu14I | TTCGAA | 1 cut(s) | 140 |
| BpuEI | CTTGAG | 6 cut(s) | 367, 825, 1600, 2270, 2291, 2297 |
| BpuMI | CCSGG | 3 cut(s) | 1165, 1166, 1996 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1773 |
| BsaI | GGTCTC | 1 cut(s) | 2246 |
| BsaJI | CCNNGG | 7 cut(s) | 66, 531, 873, 1164, 1473, 1648, 2026 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 72, 165, 280, 1653, 1675 |
| Bse1I | ACTGG | 3 cut(s) | 207, 579, 1045 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1773 |
| BseBI | CCWGG | 4 cut(s) | 275, 874, 1365, 1907 |
| BseDI | CCNNGG | 7 cut(s) | 66, 531, 873, 1164, 1473, 1648, 2026 |
| BseGI | GGATG | 4 cut(s) | 544, 1255, 2133, 2140 |
| BseJI | GATNNNNATC | 1 cut(s) | 1773 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 72, 165, 280, 1653, 1675 |
| BseMII | CTCAG | 7 cut(s) | 557, 633, 927, 1302, 1527, 1825, 2210 |
| BseNI | ACTGG | 3 cut(s) | 207, 579, 1045 |
| BseRI | GAGGAG | 3 cut(s) | 525, 1205, 1328 |
| BseX3I | CGGCCG | 1 cut(s) | 2226 |
| BseXI | GCAGC | 6 cut(s) | 234, 443, 793, 1065, 1213, 1940 |
| BseYI | CCCAGC | 1 cut(s) | 1140 |
| BsgI | GTGCAG | 3 cut(s) | 441, 450, 1516 |
| Bsh1236I | CGCG | 1 cut(s) | 1848 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1663, 2229 |
| BshFI | GGCC | 9 cut(s) | 273, 878, 911, 1154, 1398, 1905, 1969, 2054, 2228 |
| BsiEI | CGRYCG | 2 cut(s) | 1663, 2229 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1092, 2073 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1164, 1690 |
| BsiSI | CCGG | 3 cut(s) | 458, 1165, 1995 |
| BslFI | GGGAC | 3 cut(s) | 541, 1123, 2365 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 72, 165, 280, 1653, 1675 |
| BsmAI | GTCTC | 3 cut(s) | 343, 1578, 2246 |
| BsmFI | GGGAC | 3 cut(s) | 541, 1123, 2365 |
| BsmI | GAATGC | 2 cut(s) | 263, 692 |
| BsnI | GGCC | 9 cut(s) | 273, 878, 911, 1154, 1398, 1905, 1969, 2054, 2228 |
| Bso31I | GGTCTC | 1 cut(s) | 2246 |
| BsoBI | CYCGRG | 2 cut(s) | 1164, 1690 |
| Bsp119I | TTCGAA | 1 cut(s) | 140 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1092, 2073 |
| Bsp143I | GATC | 7 cut(s) | 342, 541, 1317, 1428, 1768, 1835, 1942 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1716, 1811 |
| Bsp19I | CCATGG | 1 cut(s) | 531 |
| BspACI | CCGC | 6 cut(s) | 1198, 1399, 1676, 1794, 2160, 2225 |
| BspANI | GGCC | 9 cut(s) | 273, 878, 911, 1154, 1398, 1905, 1969, 2054, 2228 |
| BspCNI | CTCAG | 7 cut(s) | 558, 632, 928, 1303, 1528, 1824, 2209 |
| BspFNI | CGCG | 1 cut(s) | 1848 |
| BspHI | TCATGA | 2 cut(s) | 130, 1021 |
| BspLI | GGNNCC | 2 cut(s) | 529, 2381 |
| BspMAI | CTGCAG | 1 cut(s) | 811 |
| BspPI | GGATC | 1 cut(s) | 1423 |
| BspQI | GCTCTTC | 1 cut(s) | 2061 |
| BspT104I | TTCGAA | 1 cut(s) | 140 |
| BspTNI | GGTCTC | 1 cut(s) | 2246 |
| BsrI | ACTGG | 3 cut(s) | 207, 579, 1045 |
| BssECI | CCNNGG | 7 cut(s) | 66, 531, 873, 1164, 1473, 1648, 2026 |
| BssMI | GATC | 7 cut(s) | 342, 541, 1317, 1428, 1768, 1835, 1942 |
| BssT1I | CCWWGG | 4 cut(s) | 66, 531, 1473, 1648 |
| Bst2UI | CCWGG | 4 cut(s) | 275, 874, 1365, 1907 |
| Bst4CI | ACNGT | 9 cut(s) | 298, 680, 1055, 1417, 1664, 2027, 2059, 2323, 2394 |
| Bst6I | CTCTTC | 3 cut(s) | 1164, 2061, 2078 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 428 |
| BstBI | TTCGAA | 1 cut(s) | 140 |
| BstC8I | GCNNGC | 2 cut(s) | 1655, 2052 |
| BstDSI | CCRYGG | 2 cut(s) | 531, 2026 |
| BstF5I | GGATG | 4 cut(s) | 544, 1255, 2133, 2140 |
| BstFNI | CGCG | 1 cut(s) | 1848 |
| BstHHI | GCGC | 2 cut(s) | 252, 1850 |
| BstKTI | GATC | 7 cut(s) | 345, 544, 1320, 1431, 1771, 1838, 1945 |
| BstMAI | GTCTC | 3 cut(s) | 343, 1578, 2246 |
| BstMBI | GATC | 7 cut(s) | 342, 541, 1317, 1428, 1768, 1835, 1942 |
| BstMCI | CGRYCG | 2 cut(s) | 1663, 2229 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 428, 908, 1087, 1418, 2000, 2077, 2105 |
| BstNI | CCWGG | 4 cut(s) | 275, 874, 1365, 1907 |
| BstNSI | RCATGY | 1 cut(s) | 2222 |
| BstSCI | CCNGG | 7 cut(s) | 273, 872, 1163, 1164, 1363, 1905, 1994 |
| BstSFI | CTRYAG | 2 cut(s) | 642, 807 |
| BstUI | CGCG | 1 cut(s) | 1848 |
| BstV1I | GCAGC | 6 cut(s) | 234, 443, 793, 1065, 1213, 1940 |
| BstV2I | GAAGAC | 3 cut(s) | 398, 499, 819 |
| BstX2I | RGATCY | 1 cut(s) | 1428 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2062 |
| BstYI | RGATCY | 1 cut(s) | 1428 |
| BstZI | CGGCCG | 1 cut(s) | 2226 |
| BsuI | GTATCC | 1 cut(s) | 1676 |
| BsuRI | GGCC | 9 cut(s) | 273, 878, 911, 1154, 1398, 1905, 1969, 2054, 2228 |
| BtgI | CCRYGG | 2 cut(s) | 531, 2026 |
| BtgZI | GCGATG | 1 cut(s) | 1925 |
| BtsCI | GGATG | 4 cut(s) | 544, 1255, 2133, 2140 |
| BtsIMutI | CAGTG | 5 cut(s) | 77, 1038, 1275, 1533, 2064 |
| Cac8I | GCNNGC | 2 cut(s) | 1655, 2052 |
| CciI | TCATGA | 2 cut(s) | 130, 1021 |
| CfoI | GCGC | 2 cut(s) | 252, 1850 |
| Cfr13I | GGNCC | 6 cut(s) | 528, 876, 909, 1921, 2030, 2379 |
| Cfr9I | CCCGGG | 1 cut(s) | 1164 |
| Csp6I | GTAC | 3 cut(s) | 256, 1303, 1644 |
| CviQI | GTAC | 3 cut(s) | 256, 1303, 1644 |
| DpnI | GATC | 7 cut(s) | 344, 543, 1319, 1430, 1770, 1837, 1944 |
| DpnII | GATC | 7 cut(s) | 342, 541, 1317, 1428, 1768, 1835, 1942 |
| DraI | TTTAAA | 1 cut(s) | 1468 |
| EaeI | YGGCCR | 4 cut(s) | 271, 1152, 2052, 2226 |
| EagI | CGGCCG | 1 cut(s) | 2226 |
| Eam1104I | CTCTTC | 3 cut(s) | 1164, 2061, 2078 |
| EarI | CTCTTC | 3 cut(s) | 1164, 2061, 2078 |
| Ecl136II | GAGCTC | 2 cut(s) | 1090, 2071 |
| EclXI | CGGCCG | 1 cut(s) | 2226 |
| Eco130I | CCWWGG | 4 cut(s) | 66, 531, 1473, 1648 |
| Eco24I | GRGCYC | 2 cut(s) | 1092, 2073 |
| Eco31I | GGTCTC | 1 cut(s) | 2246 |
| Eco47I | GGWCC | 4 cut(s) | 528, 1921, 2030, 2379 |
| Eco52I | CGGCCG | 1 cut(s) | 2226 |
| Eco53kI | GAGCTC | 2 cut(s) | 1090, 2071 |
| Eco57I | CTGAAG | 2 cut(s) | 101, 2102 |
| Eco88I | CYCGRG | 2 cut(s) | 1164, 1690 |
| EcoICRI | GAGCTC | 2 cut(s) | 1090, 2071 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2379 |
| EcoRI | GAATTC | 1 cut(s) | 91 |
| EcoRII | CCWGG | 4 cut(s) | 273, 872, 1363, 1905 |
| EcoT14I | CCWWGG | 4 cut(s) | 66, 531, 1473, 1648 |
| EcoT22I | ATGCAT | 1 cut(s) | 1872 |
| EcoT38I | GRGCYC | 2 cut(s) | 1092, 2073 |
| ErhI | CCWWGG | 4 cut(s) | 66, 531, 1473, 1648 |
| FaqI | GGGAC | 3 cut(s) | 541, 1123, 2365 |
| FbaI | TGATCA | 1 cut(s) | 541 |
| Fnu4HI | GCNGC | 9 cut(s) | 248, 432, 807, 1079, 1199, 1202, 1399, 1929, 2226 |
| FokI | GGATG | 4 cut(s) | 551, 1262, 2140, 2147 |
| FriOI | GRGCYC | 2 cut(s) | 1092, 2073 |
| Fsp4HI | GCNGC | 9 cut(s) | 248, 432, 807, 1079, 1199, 1202, 1399, 1929, 2226 |
| FspI | TGCGCA | 1 cut(s) | 251 |
| GlaI | GCGC | 2 cut(s) | 251, 1849 |
| GluI | GCNGC | 9 cut(s) | 248, 432, 807, 1079, 1199, 1202, 1399, 1929, 2226 |
| GsaI | CCCAGC | 1 cut(s) | 1144 |
| GsuI | CTGGAG | 1 cut(s) | 1062 |
| HaeIII | GGCC | 9 cut(s) | 273, 878, 911, 1154, 1398, 1905, 1969, 2054, 2228 |
| HapII | CCGG | 3 cut(s) | 458, 1165, 1995 |
| HhaI | GCGC | 2 cut(s) | 252, 1850 |
| Hin6I | GCGC | 2 cut(s) | 250, 1848 |
| HinP1I | GCGC | 2 cut(s) | 250, 1848 |
| HinfI | GANTC | 8 cut(s) | 378, 791, 1136, 1293, 1451, 1936, 2035, 2212 |
| HpaII | CCGG | 3 cut(s) | 458, 1165, 1995 |
| HphI | GGTGA | 3 cut(s) | 289, 1489, 2105 |
| Hpy166II | GTNNAC | 4 cut(s) | 75, 1305, 1735, 2030 |
| Hpy188I | TCNGA | 4 cut(s) | 796, 1322, 1345, 1840 |
| Hpy8I | GTNNAC | 4 cut(s) | 75, 1305, 1735, 2030 |
| HpyAV | CCTTC | 8 cut(s) | 13, 136, 274, 1263, 1878, 2117, 2354, 2393 |
| HpyCH4III | ACNGT | 9 cut(s) | 298, 680, 1055, 1417, 1664, 2027, 2059, 2323, 2394 |
| HpyCH4IV | ACGT | 3 cut(s) | 383, 1348, 1642 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 428, 908, 1087, 1418, 2000, 2077, 2105 |
| HpySE526I | ACGT | 3 cut(s) | 383, 1348, 1642 |
| HspAI | GCGC | 2 cut(s) | 250, 1848 |
| Ksp22I | TGATCA | 1 cut(s) | 541 |
| Kzo9I | GATC | 7 cut(s) | 342, 541, 1317, 1428, 1768, 1835, 1942 |
| LguI | GCTCTTC | 1 cut(s) | 2061 |
| LmnI | GCTCC | 3 cut(s) | 177, 1075, 1107 |
| Lsp1109I | GCAGC | 6 cut(s) | 234, 443, 793, 1065, 1213, 1940 |
| LweI | GCATC | 3 cut(s) | 1857, 1879, 2086 |
| MaeII | ACGT | 3 cut(s) | 383, 1348, 1642 |
| MaeIII | GTNAC | 6 cut(s) | 1030, 1477, 1513, 1780, 2021, 2153 |
| MalI | GATC | 7 cut(s) | 344, 543, 1319, 1430, 1770, 1837, 1944 |
| MboI | GATC | 7 cut(s) | 342, 541, 1317, 1428, 1768, 1835, 1942 |
| MflI | RGATCY | 1 cut(s) | 1428 |
| MhlI | GDGCHC | 2 cut(s) | 1092, 2073 |
| MlsI | TGGCCA | 3 cut(s) | 273, 1154, 2054 |
| MluNI | TGGCCA | 3 cut(s) | 273, 1154, 2054 |
| MlyI | GAGTC | 3 cut(s) | 1145, 1460, 2044 |
| MmeI | TCCRAC | 1 cut(s) | 1246 |
| Mox20I | TGGCCA | 3 cut(s) | 273, 1154, 2054 |
| Mph1103I | ATGCAT | 1 cut(s) | 1872 |
| MroXI | GAANNNNTTC | 2 cut(s) | 146, 1017 |
| MscI | TGGCCA | 3 cut(s) | 273, 1154, 2054 |
| MseI | TTAA | 6 cut(s) | 60, 1359, 1404, 1467, 1877, 2006 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1209, 1259, 1385, 2060 |
| Msp20I | TGGCCA | 3 cut(s) | 273, 1154, 2054 |
| MspA1I | CMGCKG | 4 cut(s) | 1310, 1794, 1931, 2162 |
| MspI | CCGG | 3 cut(s) | 458, 1165, 1995 |
| MspR9I | CCNGG | 7 cut(s) | 275, 874, 1165, 1166, 1365, 1907, 1996 |
| Mva1269I | GAATGC | 2 cut(s) | 263, 692 |
| MvaI | CCWGG | 4 cut(s) | 275, 874, 1365, 1907 |
| MvnI | CGCG | 1 cut(s) | 1848 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 428, 908, 1087, 1418, 2000, 2077, 2105 |
| NciI | CCSGG | 3 cut(s) | 1165, 1166, 1996 |
| NcoI | CCATGG | 1 cut(s) | 531 |
| NdeII | GATC | 7 cut(s) | 342, 541, 1317, 1428, 1768, 1835, 1942 |
| NlaIV | GGNNCC | 2 cut(s) | 529, 2381 |
| NmeAIII | GCCGAG | 1 cut(s) | 35 |
| NmuCI | GTSAC | 4 cut(s) | 1030, 1477, 1780, 2153 |
| NsbI | TGCGCA | 1 cut(s) | 251 |
| NsiI | ATGCAT | 1 cut(s) | 1872 |
| NspI | RCATGY | 1 cut(s) | 2222 |
| NspV | TTCGAA | 1 cut(s) | 140 |
| PagI | TCATGA | 2 cut(s) | 130, 1021 |
| PciI | ACATGT | 1 cut(s) | 2218 |
| PciSI | GCTCTTC | 1 cut(s) | 2061 |
| PctI | GAATGC | 2 cut(s) | 263, 692 |
| PdmI | GAANNNNTTC | 2 cut(s) | 146, 1017 |
| PfeI | GAWTC | 5 cut(s) | 378, 791, 1293, 1936, 2212 |
| PflFI | GACNNNGTC | 1 cut(s) | 2034 |
| PkrI | GCNGC | 9 cut(s) | 249, 433, 808, 1080, 1200, 1203, 1400, 1930, 2227 |
| PleI | GAGTC | 3 cut(s) | 1144, 1459, 2043 |
| PpsI | GAGTC | 3 cut(s) | 1144, 1459, 2043 |
| PpuMI | RGGWCCY | 1 cut(s) | 2379 |
| PscI | ACATGT | 1 cut(s) | 2218 |
| Psp124BI | GAGCTC | 2 cut(s) | 1092, 2073 |
| Psp1406I | AACGTT | 1 cut(s) | 1348 |
| Psp5II | RGGWCCY | 1 cut(s) | 2379 |
| Psp6I | CCWGG | 4 cut(s) | 273, 872, 1363, 1905 |
| PspFI | CCCAGC | 1 cut(s) | 1140 |
| PspGI | CCWGG | 4 cut(s) | 273, 872, 1363, 1905 |
| PspN4I | GGNNCC | 2 cut(s) | 529, 2381 |
| PspPI | GGNCC | 6 cut(s) | 528, 876, 909, 1921, 2030, 2379 |
| PspPPI | RGGWCCY | 1 cut(s) | 2379 |
| PstI | CTGCAG | 1 cut(s) | 811 |
| PsuI | RGATCY | 1 cut(s) | 1428 |
| PsyI | GACNNNGTC | 1 cut(s) | 2034 |
| PvuII | CAGCTG | 2 cut(s) | 1310, 1931 |
| RsaI | GTAC | 3 cut(s) | 257, 1304, 1645 |
| RsaNI | GTAC | 3 cut(s) | 256, 1303, 1644 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1209, 1259, 1385, 2060 |
| SacI | GAGCTC | 2 cut(s) | 1092, 2073 |
| SapI | GCTCTTC | 1 cut(s) | 2061 |
| SaqAI | TTAA | 6 cut(s) | 60, 1359, 1404, 1467, 1877, 2006 |
| SatI | GCNGC | 9 cut(s) | 248, 432, 807, 1079, 1199, 1202, 1399, 1929, 2226 |
| Sau3AI | GATC | 7 cut(s) | 342, 541, 1317, 1428, 1768, 1835, 1942 |
| Sau96I | GGNCC | 6 cut(s) | 528, 876, 909, 1921, 2030, 2379 |
| ScaI | AGTACT | 1 cut(s) | 257 |
| SchI | GAGTC | 3 cut(s) | 1145, 1460, 2044 |
| ScrFI | CCNGG | 7 cut(s) | 275, 874, 1165, 1166, 1365, 1907, 1996 |
| SduI | GDGCHC | 2 cut(s) | 1092, 2073 |
| SfaNI | GCATC | 3 cut(s) | 1857, 1879, 2086 |
| SfcI | CTRYAG | 2 cut(s) | 642, 807 |
| SfuI | TTCGAA | 1 cut(s) | 140 |
| SinI | GGWCC | 4 cut(s) | 528, 1921, 2030, 2379 |
| SmaI | CCCGGG | 1 cut(s) | 1166 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1209, 1259, 1385, 2060 |
| SmlI | CTYRAG | 6 cut(s) | 346, 840, 1579, 2249, 2306, 2312 |
| SmoI | CTYRAG | 6 cut(s) | 346, 840, 1579, 2249, 2306, 2312 |
| SpeI | ACTAGT | 1 cut(s) | 496 |
| SsiI | CCGC | 6 cut(s) | 1198, 1399, 1676, 1794, 2160, 2225 |
| SstI | GAGCTC | 2 cut(s) | 1092, 2073 |
| StyD4I | CCNGG | 7 cut(s) | 273, 872, 1163, 1164, 1363, 1905, 1994 |
| StyI | CCWWGG | 4 cut(s) | 66, 531, 1473, 1648 |
| TaaI | ACNGT | 9 cut(s) | 298, 680, 1055, 1417, 1664, 2027, 2059, 2323, 2394 |
| TaiI | ACGT | 3 cut(s) | 386, 1351, 1645 |
| TaqI | TCGA | 4 cut(s) | 140, 852, 976, 1094 |
| TaqII | GACCGA | 1 cut(s) | 2047 |
| TatI | WGTACW | 2 cut(s) | 255, 1302 |
| TauI | GCSGC | 3 cut(s) | 1201, 1401, 2228 |
| TfiI | GAWTC | 5 cut(s) | 378, 791, 1293, 1936, 2212 |
| Tru1I | TTAA | 6 cut(s) | 60, 1359, 1404, 1467, 1877, 2006 |
| Tru9I | TTAA | 6 cut(s) | 60, 1359, 1404, 1467, 1877, 2006 |
| TscAI | CASTG | 5 cut(s) | 84, 1045, 1282, 1540, 2064 |
| TseFI | GTSAC | 4 cut(s) | 1030, 1477, 1780, 2153 |
| TseI | GCWGC | 6 cut(s) | 247, 431, 806, 1078, 1201, 1928 |
| Tsp45I | GTSAC | 4 cut(s) | 1030, 1477, 1780, 2153 |
| TspGWI | ACGGA | 3 cut(s) | 1049, 1658, 1752 |
| TspMI | CCCGGG | 1 cut(s) | 1164 |
| TspRI | CASTG | 5 cut(s) | 84, 1045, 1282, 1540, 2064 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2034 |
| VpaK11BI | GGWCC | 4 cut(s) | 528, 1921, 2030, 2379 |
| XapI | RAATTY | 2 cut(s) | 91, 1063 |
| XbaI | TCTAGA | 1 cut(s) | 1945 |
| XceI | RCATGY | 1 cut(s) | 2222 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 370, 1371 |
| XmaI | CCCGGG | 1 cut(s) | 1164 |
| XmnI | GAANNNNTTC | 2 cut(s) | 146, 1017 |
| ZrmI | AGTACT | 1 cut(s) | 257 |
| Zsp2I | ATGCAT | 1 cut(s) | 1872 |