U-box domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G65500 AT5G65500 |
| fragaria_vesca | FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 FvH4_1g19550 |
| malus_domestica | MD15G1311300.v1.1 |
| prunus_persica | Prupe.6G202700_v2.0.a1 Prupe.6G202700_v2.0.a1 |
| pyrus_communis | pycom15g27510 |
| rosa_chinensis | RchiOBHm_Chr2g0111061 |
| rosa_laevigata | RLG00000017862 |
| rosa_multiflora | Rmu_sc0003994.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00132720 |
| rosa_rugosa | Rorug02G0170800 |
| rosa_samantha | Rh2AG223300 Rh2BG235200 Rh2CG226700 Rh2DG231000 |
| rosa_wichuraiana | Rw2G017230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1106 |
| AarI | CACCTGC | 1 cut(s) | 286 |
| Acc36I | ACCTGC | 1 cut(s) | 286 |
| AccBSI | CCGCTC | 1 cut(s) | 2188 |
| AciI | CCGC | 9 cut(s) | 854, 1273, 1471, 1714, 1843, 1866, 2066, 2188, 2285 |
| AclI | AACGTT | 1 cut(s) | 1423 |
| AclWI | GGATC | 3 cut(s) | 457, 2001, 2022 |
| AcoI | YGGCCR | 2 cut(s) | 1810, 2039 |
| AcsI | RAATTY | 6 cut(s) | 91, 488, 634, 703, 1579, 1755 |
| AcuI | CTGAAG | 1 cut(s) | 1032 |
| AfaI | GTAC | 4 cut(s) | 155, 278, 1634, 2232 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1725, 2422 |
| AflII | CTTAAG | 1 cut(s) | 2368 |
| AhlI | ACTAGT | 1 cut(s) | 1454 |
| AjnI | CCWGG | 3 cut(s) | 1438, 1977, 2421 |
| AleI | CACNNNNGTG | 1 cut(s) | 1734 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1664, 1696, 1887, 1919 |
| Alw21I | GWGCWC | 3 cut(s) | 971, 1155, 2145 |
| Alw26I | GTCTC | 2 cut(s) | 1205, 1650 |
| AlwI | GGATC | 3 cut(s) | 457, 2001, 2022 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 760 |
| Ama87I | CYCGRG | 1 cut(s) | 1239 |
| AoxI | GGCC | 9 cut(s) | 842, 951, 1468, 1796, 1810, 1975, 2039, 2102, 2190 |
| ApeKI | GCWGC | 4 cut(s) | 872, 1276, 2000, 2288 |
| ApoI | RAATTY | 6 cut(s) | 91, 488, 634, 703, 1579, 1755 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1092, 1290, 1747 |
| AspA2I | CCTAGG | 1 cut(s) | 1720 |
| AspS9I | GGNCC | 7 cut(s) | 984, 1716, 1797, 1840, 1975, 2102, 2190 |
| AsuC2I | CCSGG | 3 cut(s) | 1240, 1241, 2012 |
| AsuHPI | GGTGA | 9 cut(s) | 310, 403, 580, 656, 1054, 1264, 1457, 1561, 1579 |
| AsuNHI | GCTAGC | 1 cut(s) | 613 |
| AvaI | CYCGRG | 1 cut(s) | 1239 |
| AvaII | GGWCC | 3 cut(s) | 984, 1716, 1840 |
| AvrII | CCTAGG | 1 cut(s) | 1720 |
| BaeGI | GKGCMC | 1 cut(s) | 1741 |
| BanII | GRGCYC | 3 cut(s) | 1155, 1878, 2145 |
| BbsI | GAAGAC | 4 cut(s) | 419, 517, 795, 885 |
| Bbv12I | GWGCWC | 3 cut(s) | 971, 1155, 2145 |
| BbvI | GCAGC | 4 cut(s) | 859, 1288, 2012, 2300 |
| BccI | CCATC | 8 cut(s) | 47, 388, 565, 829, 1243, 2020, 2128, 2288 |
| BceAI | ACGGC | 1 cut(s) | 2026 |
| BciT130I | CCWGG | 3 cut(s) | 1440, 1979, 2423 |
| BclI | TGATCA | 2 cut(s) | 559, 1584 |
| BcnI | CCSGG | 3 cut(s) | 1240, 1241, 2012 |
| BcoDI | GTCTC | 2 cut(s) | 1205, 1650 |
| BcuI | ACTAGT | 1 cut(s) | 1454 |
| BfmI | CTRYAG | 2 cut(s) | 873, 2004 |
| BfrI | CTTAAG | 1 cut(s) | 2368 |
| BfuAI | ACCTGC | 1 cut(s) | 286 |
| BisI | GCNGC | 7 cut(s) | 873, 1274, 1277, 1471, 2001, 2286, 2289 |
| BlnI | CCTAGG | 1 cut(s) | 1720 |
| BlpI | GCTNAGC | 1 cut(s) | 2071 |
| BlsI | GCNGC | 7 cut(s) | 874, 1275, 1278, 1472, 2002, 2287, 2290 |
| Bme1390I | CCNGG | 6 cut(s) | 1240, 1241, 1440, 1979, 2012, 2423 |
| Bme18I | GGWCC | 3 cut(s) | 984, 1716, 1840 |
| BmeT110I | CYCGRG | 1 cut(s) | 1239 |
| BmgT120I | GGNCC | 7 cut(s) | 984, 1716, 1797, 1840, 1975, 2102, 2190 |
| BmiI | GGNNCC | 1 cut(s) | 1718 |
| BmrFI | CCNGG | 6 cut(s) | 1240, 1241, 1440, 1979, 2012, 2423 |
| BmrI | ACTGGG | 1 cut(s) | 2229 |
| BmsI | GCATC | 6 cut(s) | 766, 1315, 1482, 1530, 1929, 1951 |
| BmtI | GCTAGC | 1 cut(s) | 617 |
| BmuI | ACTGGG | 1 cut(s) | 2229 |
| BpiI | GAAGAC | 4 cut(s) | 419, 517, 795, 885 |
| BpmI | CTGGAG | 1 cut(s) | 1139 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1545, 1613, 2375 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2071 |
| BpuEI | CTTGAG | 4 cut(s) | 65, 900, 1672, 2098 |
| BpuMI | CCSGG | 3 cut(s) | 1240, 1241, 2012 |
| BsaI | GGTCTC | 1 cut(s) | 1205 |
| BsaJI | CCNNGG | 7 cut(s) | 34, 141, 948, 1239, 1720, 1793, 2098 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1142, 1172 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1725, 2422 |
| Bse1I | ACTGG | 6 cut(s) | 393, 519, 1156, 1957, 2223, 2235 |
| Bse3DI | GCAATG | 1 cut(s) | 1989 |
| BseBI | CCWGG | 3 cut(s) | 1440, 1979, 2423 |
| BseDI | CCNNGG | 7 cut(s) | 34, 141, 948, 1239, 1720, 1793, 2098 |
| BseGI | GGATG | 4 cut(s) | 284, 562, 1830, 2418 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1725, 2422 |
| BseMI | GCAATG | 1 cut(s) | 1989 |
| BseMII | CTCAG | 5 cut(s) | 200, 1107, 1524, 1599, 2389 |
| BseNI | ACTGG | 6 cut(s) | 393, 519, 1156, 1957, 2223, 2235 |
| BseRI | GAGGAG | 3 cut(s) | 543, 1403, 1675 |
| BseSI | GKGCMC | 1 cut(s) | 1741 |
| BseXI | GCAGC | 4 cut(s) | 859, 1288, 2012, 2300 |
| BseYI | CCCAGC | 2 cut(s) | 1967, 1972 |
| BsgI | GTGCAG | 3 cut(s) | 459, 836, 1588 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1735, 1910 |
| BshFI | GGCC | 9 cut(s) | 844, 953, 1470, 1798, 1812, 1977, 2041, 2104, 2192 |
| BsiEI | CGRYCG | 2 cut(s) | 1735, 1910 |
| BsiHKAI | GWGCWC | 3 cut(s) | 971, 1155, 2145 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1239 |
| BsiSI | CCGG | 2 cut(s) | 1240, 2011 |
| BslFI | GGGAC | 1 cut(s) | 1685 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1725, 2422 |
| BsmAI | GTCTC | 2 cut(s) | 1205, 1650 |
| BsmBI | CGTCTC | 1 cut(s) | 1650 |
| BsmFI | GGGAC | 1 cut(s) | 1685 |
| BsnI | GGCC | 9 cut(s) | 844, 953, 1470, 1798, 1812, 1977, 2041, 2104, 2192 |
| Bso31I | GGTCTC | 1 cut(s) | 1205 |
| BsoBI | CYCGRG | 1 cut(s) | 1239 |
| Bsp1286I | GDGCHC | 5 cut(s) | 971, 1155, 1741, 1878, 2145 |
| Bsp1407I | TGTACA | 1 cut(s) | 153 |
| Bsp143I | GATC | 9 cut(s) | 449, 559, 819, 1392, 1584, 1860, 1907, 1993, 2014 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2071 |
| BspACI | CCGC | 9 cut(s) | 854, 1273, 1471, 1714, 1843, 1866, 2066, 2188, 2285 |
| BspANI | GGCC | 9 cut(s) | 844, 953, 1470, 1798, 1812, 1977, 2041, 2104, 2192 |
| BspCNI | CTCAG | 5 cut(s) | 201, 1108, 1523, 1600, 2388 |
| BspHI | TCATGA | 2 cut(s) | 1096, 1888 |
| BspLI | GGNNCC | 1 cut(s) | 1718 |
| BspMAI | CTGCAG | 1 cut(s) | 877 |
| BspMI | ACCTGC | 1 cut(s) | 286 |
| BspOI | GCTAGC | 1 cut(s) | 617 |
| BspPI | GGATC | 3 cut(s) | 457, 2001, 2022 |
| BspQI | GCTCTTC | 2 cut(s) | 1008, 2133 |
| BspTI | CTTAAG | 1 cut(s) | 2368 |
| BspTNI | GGTCTC | 1 cut(s) | 1205 |
| BsrBI | CCGCTC | 1 cut(s) | 2188 |
| BsrDI | GCAATG | 1 cut(s) | 1989 |
| BsrGI | TGTACA | 1 cut(s) | 153 |
| BsrI | ACTGG | 6 cut(s) | 393, 519, 1156, 1957, 2223, 2235 |
| BssECI | CCNNGG | 7 cut(s) | 34, 141, 948, 1239, 1720, 1793, 2098 |
| BssMI | GATC | 9 cut(s) | 449, 559, 819, 1392, 1584, 1860, 1907, 1993, 2014 |
| BssT1I | CCWWGG | 4 cut(s) | 34, 141, 948, 1720 |
| Bst2UI | CCWGG | 3 cut(s) | 1440, 1979, 2423 |
| Bst4CI | ACNGT | 5 cut(s) | 794, 1489, 1736, 2099, 2131 |
| Bst6I | CTCTTC | 4 cut(s) | 1008, 1032, 2133, 2412 |
| BstAFI | CTTAAG | 1 cut(s) | 2368 |
| BstAUI | TGTACA | 1 cut(s) | 153 |
| BstC8I | GCNNGC | 5 cut(s) | 615, 2064, 2068, 2124, 2190 |
| BstDSI | CCRYGG | 1 cut(s) | 2098 |
| BstEII | GGTNACC | 1 cut(s) | 1042 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2420 |
| BstF5I | GGATG | 4 cut(s) | 284, 562, 1830, 2418 |
| BstKTI | GATC | 9 cut(s) | 452, 562, 822, 1395, 1587, 1863, 1910, 1996, 2017 |
| BstMAI | GTCTC | 2 cut(s) | 1205, 1650 |
| BstMBI | GATC | 9 cut(s) | 449, 559, 819, 1392, 1584, 1860, 1907, 1993, 2014 |
| BstMCI | CGRYCG | 2 cut(s) | 1735, 1910 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1490, 1745, 2072 |
| BstNI | CCWGG | 3 cut(s) | 1440, 1979, 2423 |
| BstNSI | RCATGY | 3 cut(s) | 854, 1639, 2285 |
| BstPI | GGTNACC | 1 cut(s) | 1042 |
| BstSCI | CCNGG | 6 cut(s) | 1238, 1239, 1438, 1977, 2010, 2421 |
| BstSFI | CTRYAG | 2 cut(s) | 873, 2004 |
| BstSLI | GKGCMC | 1 cut(s) | 1741 |
| BstV1I | GCAGC | 4 cut(s) | 859, 1288, 2012, 2300 |
| BstV2I | GAAGAC | 4 cut(s) | 419, 517, 795, 885 |
| BstX2I | RGATCY | 1 cut(s) | 2014 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1336 |
| BstYI | RGATCY | 1 cut(s) | 2014 |
| BsuRI | GGCC | 9 cut(s) | 844, 953, 1470, 1798, 1812, 1977, 2041, 2104, 2192 |
| BtgI | CCRYGG | 1 cut(s) | 2098 |
| BtgZI | GCGATG | 1 cut(s) | 2337 |
| BtsCI | GGATG | 4 cut(s) | 284, 562, 1830, 2418 |
| BtsI | GCAGTG | 1 cut(s) | 77 |
| BtsIMutI | CAGTG | 6 cut(s) | 77, 354, 1113, 1605, 2136, 2230 |
| BveI | ACCTGC | 1 cut(s) | 286 |
| Cac8I | GCNNGC | 5 cut(s) | 615, 2064, 2068, 2124, 2190 |
| CaiI | CAGNNNCTG | 1 cut(s) | 760 |
| CciI | TCATGA | 2 cut(s) | 1096, 1888 |
| Cfr13I | GGNCC | 7 cut(s) | 984, 1716, 1797, 1840, 1975, 2102, 2190 |
| Cfr9I | CCCGGG | 1 cut(s) | 1239 |
| CseI | GACGC | 1 cut(s) | 2324 |
| Csp6I | GTAC | 4 cut(s) | 154, 277, 1633, 2231 |
| CviQI | GTAC | 4 cut(s) | 154, 277, 1633, 2231 |
| DpnI | GATC | 9 cut(s) | 451, 561, 821, 1394, 1586, 1862, 1909, 1995, 2016 |
| DpnII | GATC | 9 cut(s) | 449, 559, 819, 1392, 1584, 1860, 1907, 1993, 2014 |
| DraI | TTTAAA | 1 cut(s) | 1062 |
| EaeI | YGGCCR | 2 cut(s) | 1810, 2039 |
| Eam1104I | CTCTTC | 4 cut(s) | 1008, 1032, 2133, 2412 |
| EarI | CTCTTC | 4 cut(s) | 1008, 1032, 2133, 2412 |
| Ecl136II | GAGCTC | 2 cut(s) | 1153, 2143 |
| Eco130I | CCWWGG | 4 cut(s) | 34, 141, 948, 1720 |
| Eco147I | AGGCCT | 1 cut(s) | 844 |
| Eco24I | GRGCYC | 3 cut(s) | 1155, 1878, 2145 |
| Eco31I | GGTCTC | 1 cut(s) | 1205 |
| Eco47I | GGWCC | 3 cut(s) | 984, 1716, 1840 |
| Eco53kI | GAGCTC | 2 cut(s) | 1153, 2143 |
| Eco57I | CTGAAG | 1 cut(s) | 1032 |
| Eco88I | CYCGRG | 1 cut(s) | 1239 |
| Eco91I | GGTNACC | 1 cut(s) | 1042 |
| EcoICRI | GAGCTC | 2 cut(s) | 1153, 2143 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2420 |
| EcoO65I | GGTNACC | 1 cut(s) | 1042 |
| EcoRI | GAATTC | 1 cut(s) | 91 |
| EcoRII | CCWGG | 3 cut(s) | 1438, 1977, 2421 |
| EcoT14I | CCWWGG | 4 cut(s) | 34, 141, 948, 1720 |
| EcoT22I | ATGCAT | 1 cut(s) | 1944 |
| EcoT38I | GRGCYC | 3 cut(s) | 1155, 1878, 2145 |
| ErhI | CCWWGG | 4 cut(s) | 34, 141, 948, 1720 |
| Esp3I | CGTCTC | 1 cut(s) | 1650 |
| FaqI | GGGAC | 1 cut(s) | 1685 |
| FauI | CCCGC | 2 cut(s) | 2059, 2181 |
| FbaI | TGATCA | 2 cut(s) | 559, 1584 |
| Fnu4HI | GCNGC | 7 cut(s) | 873, 1274, 1277, 1471, 2001, 2286, 2289 |
| FokI | GGATG | 4 cut(s) | 271, 569, 1817, 2405 |
| FriOI | GRGCYC | 3 cut(s) | 1155, 1878, 2145 |
| Fsp4HI | GCNGC | 7 cut(s) | 873, 1274, 1277, 1471, 2001, 2286, 2289 |
| GluI | GCNGC | 7 cut(s) | 873, 1274, 1277, 1471, 2001, 2286, 2289 |
| GsaI | CCCAGC | 2 cut(s) | 1971, 1976 |
| GsuI | CTGGAG | 1 cut(s) | 1139 |
| HaeIII | GGCC | 9 cut(s) | 844, 953, 1470, 1798, 1812, 1977, 2041, 2104, 2192 |
| HapII | CCGG | 2 cut(s) | 1240, 2011 |
| HgaI | GACGC | 1 cut(s) | 2324 |
| HindIII | AAGCTT | 1 cut(s) | 2060 |
| HinfI | GANTC | 8 cut(s) | 399, 546, 644, 887, 1076, 1302, 1599, 2275 |
| HpaII | CCGG | 2 cut(s) | 1240, 2011 |
| HphI | GGTGA | 9 cut(s) | 310, 403, 580, 656, 1054, 1264, 1457, 1561, 1579 |
| Hpy166II | GTNNAC | 3 cut(s) | 75, 154, 156 |
| Hpy188I | TCNGA | 7 cut(s) | 210, 1081, 1397, 1420, 1753, 1907, 1912 |
| Hpy188III | TCNNGA | 7 cut(s) | 82, 409, 917, 1097, 1889, 2018, 2261 |
| Hpy8I | GTNNAC | 3 cut(s) | 75, 154, 156 |
| Hpy99I | CGWCG | 1 cut(s) | 1302 |
| HpyAV | CCTTC | 4 cut(s) | 13, 177, 295, 1950 |
| HpyCH4III | ACNGT | 5 cut(s) | 794, 1489, 1736, 2099, 2131 |
| HpyCH4IV | ACGT | 4 cut(s) | 404, 459, 1423, 1659 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1490, 1745, 2072 |
| HpySE526I | ACGT | 4 cut(s) | 404, 459, 1423, 1659 |
| Ksp22I | TGATCA | 2 cut(s) | 559, 1584 |
| Kzo9I | GATC | 9 cut(s) | 449, 559, 819, 1392, 1584, 1860, 1907, 1993, 2014 |
| LguI | GCTCTTC | 2 cut(s) | 1008, 2133 |
| LmnI | GCTCC | 5 cut(s) | 198, 966, 1150, 1158, 1182 |
| Lsp1109I | GCAGC | 4 cut(s) | 859, 1288, 2012, 2300 |
| LweI | GCATC | 6 cut(s) | 766, 1315, 1482, 1530, 1929, 1951 |
| MaeII | ACGT | 4 cut(s) | 404, 459, 1423, 1659 |
| MaeIII | GTNAC | 7 cut(s) | 124, 212, 1042, 1352, 1549, 1852, 2093 |
| MalI | GATC | 9 cut(s) | 451, 561, 821, 1394, 1586, 1862, 1909, 1995, 2016 |
| MbiI | CCGCTC | 1 cut(s) | 2188 |
| MboI | GATC | 9 cut(s) | 449, 559, 819, 1392, 1584, 1860, 1907, 1993, 2014 |
| MflI | RGATCY | 1 cut(s) | 2014 |
| MhlI | GDGCHC | 5 cut(s) | 971, 1155, 1741, 1878, 2145 |
| Mph1103I | ATGCAT | 1 cut(s) | 1944 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1092, 1290, 1747 |
| MseI | TTAA | 9 cut(s) | 60, 905, 1061, 1371, 1434, 1667, 1949, 2087, 2369 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1334, 1734 |
| MspA1I | CMGCKG | 3 cut(s) | 1866, 2003, 2291 |
| MspCI | CTTAAG | 1 cut(s) | 2368 |
| MspI | CCGG | 2 cut(s) | 1240, 2011 |
| MspR9I | CCNGG | 6 cut(s) | 1240, 1241, 1440, 1979, 2012, 2423 |
| MvaI | CCWGG | 3 cut(s) | 1440, 1979, 2423 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1490, 1745, 2072 |
| NciI | CCSGG | 3 cut(s) | 1240, 1241, 2012 |
| NdeII | GATC | 9 cut(s) | 449, 559, 819, 1392, 1584, 1860, 1907, 1993, 2014 |
| NheI | GCTAGC | 1 cut(s) | 613 |
| NlaIV | GGNNCC | 1 cut(s) | 1718 |
| NmeAIII | GCCGAG | 1 cut(s) | 1818 |
| NmuCI | GTSAC | 4 cut(s) | 212, 1042, 1352, 1549 |
| NsiI | ATGCAT | 1 cut(s) | 1944 |
| NspI | RCATGY | 3 cut(s) | 854, 1639, 2285 |
| OliI | CACNNNNGTG | 1 cut(s) | 1734 |
| PagI | TCATGA | 2 cut(s) | 1096, 1888 |
| PaqCI | CACCTGC | 1 cut(s) | 286 |
| PceI | AGGCCT | 1 cut(s) | 844 |
| PciSI | GCTCTTC | 2 cut(s) | 1008, 2133 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1790 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1092, 1290, 1747 |
| PfeI | GAWTC | 8 cut(s) | 399, 546, 644, 887, 1076, 1302, 1599, 2275 |
| PfoI | TCCNGGA | 2 cut(s) | 2010, 2421 |
| PkrI | GCNGC | 7 cut(s) | 874, 1275, 1278, 1472, 2002, 2287, 2290 |
| Ple19I | CGATCG | 1 cut(s) | 1910 |
| PsiI | TTATAA | 1 cut(s) | 1106 |
| Psp124BI | GAGCTC | 2 cut(s) | 1155, 2145 |
| Psp1406I | AACGTT | 1 cut(s) | 1423 |
| Psp6I | CCWGG | 3 cut(s) | 1438, 1977, 2421 |
| PspEI | GGTNACC | 1 cut(s) | 1042 |
| PspFI | CCCAGC | 2 cut(s) | 1967, 1972 |
| PspGI | CCWGG | 3 cut(s) | 1438, 1977, 2421 |
| PspN4I | GGNNCC | 1 cut(s) | 1718 |
| PspPI | GGNCC | 7 cut(s) | 984, 1716, 1797, 1840, 1975, 2102, 2190 |
| PstI | CTGCAG | 1 cut(s) | 877 |
| PstNI | CAGNNNCTG | 1 cut(s) | 760 |
| PsuI | RGATCY | 1 cut(s) | 2014 |
| PvuI | CGATCG | 1 cut(s) | 1910 |
| PvuII | CAGCTG | 2 cut(s) | 2003, 2291 |
| RsaI | GTAC | 4 cut(s) | 155, 278, 1634, 2232 |
| RsaNI | GTAC | 4 cut(s) | 154, 277, 1633, 2231 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1334, 1734 |
| SacI | GAGCTC | 2 cut(s) | 1155, 2145 |
| SapI | GCTCTTC | 2 cut(s) | 1008, 2133 |
| SaqAI | TTAA | 9 cut(s) | 60, 905, 1061, 1371, 1434, 1667, 1949, 2087, 2369 |
| SatI | GCNGC | 7 cut(s) | 873, 1274, 1277, 1471, 2001, 2286, 2289 |
| Sau3AI | GATC | 9 cut(s) | 449, 559, 819, 1392, 1584, 1860, 1907, 1993, 2014 |
| Sau96I | GGNCC | 7 cut(s) | 984, 1716, 1797, 1840, 1975, 2102, 2190 |
| ScrFI | CCNGG | 6 cut(s) | 1240, 1241, 1440, 1979, 2012, 2423 |
| SduI | GDGCHC | 5 cut(s) | 971, 1155, 1741, 1878, 2145 |
| SfaNI | GCATC | 6 cut(s) | 766, 1315, 1482, 1530, 1929, 1951 |
| SfcI | CTRYAG | 2 cut(s) | 873, 2004 |
| SinI | GGWCC | 3 cut(s) | 984, 1716, 1840 |
| SmaI | CCCGGG | 1 cut(s) | 1241 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1334, 1734 |
| SmlI | CTYRAG | 6 cut(s) | 9, 80, 915, 1651, 2077, 2368 |
| SmoI | CTYRAG | 6 cut(s) | 9, 80, 915, 1651, 2077, 2368 |
| SpeI | ACTAGT | 1 cut(s) | 1454 |
| SseBI | AGGCCT | 1 cut(s) | 844 |
| SsiI | CCGC | 9 cut(s) | 854, 1273, 1471, 1714, 1843, 1866, 2066, 2188, 2285 |
| SspI | AATATT | 1 cut(s) | 136 |
| SstI | GAGCTC | 2 cut(s) | 1155, 2145 |
| StuI | AGGCCT | 1 cut(s) | 844 |
| StyD4I | CCNGG | 6 cut(s) | 1238, 1239, 1438, 1977, 2010, 2421 |
| StyI | CCWWGG | 4 cut(s) | 34, 141, 948, 1720 |
| TaaI | ACNGT | 5 cut(s) | 794, 1489, 1736, 2099, 2131 |
| TaiI | ACGT | 4 cut(s) | 407, 462, 1426, 1662 |
| TaqI | TCGA | 4 cut(s) | 741, 1300, 1305, 1570 |
| TatI | WGTACW | 3 cut(s) | 153, 276, 1632 |
| TauI | GCSGC | 3 cut(s) | 1276, 1473, 2288 |
| TfiI | GAWTC | 8 cut(s) | 399, 546, 644, 887, 1076, 1302, 1599, 2275 |
| Tru1I | TTAA | 9 cut(s) | 60, 905, 1061, 1371, 1434, 1667, 1949, 2087, 2369 |
| Tru9I | TTAA | 9 cut(s) | 60, 905, 1061, 1371, 1434, 1667, 1949, 2087, 2369 |
| TscAI | CASTG | 6 cut(s) | 77, 361, 1120, 1612, 2136, 2230 |
| TseFI | GTSAC | 4 cut(s) | 212, 1042, 1352, 1549 |
| TseI | GCWGC | 4 cut(s) | 872, 1276, 2000, 2288 |
| Tsp45I | GTSAC | 4 cut(s) | 212, 1042, 1352, 1549 |
| TspMI | CCCGGG | 1 cut(s) | 1239 |
| TspRI | CASTG | 6 cut(s) | 77, 361, 1120, 1612, 2136, 2230 |
| Vha464I | CTTAAG | 1 cut(s) | 2368 |
| VpaK11BI | GGWCC | 3 cut(s) | 984, 1716, 1840 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2420 |
| XapI | RAATTY | 6 cut(s) | 91, 488, 634, 703, 1579, 1755 |
| XbaI | TCTAGA | 1 cut(s) | 2017 |
| XceI | RCATGY | 3 cut(s) | 854, 1639, 2285 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 391, 1446 |
| XmaI | CCCGGG | 1 cut(s) | 1239 |
| XmaJI | CCTAGG | 1 cut(s) | 1720 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1092, 1290, 1747 |
| Zsp2I | ATGCAT | 1 cut(s) | 1944 |