RLG00000017862

U-box domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
22438201 .. 22441709
3509 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017862

Sequence Viewer

Length: 2424 bp
ATGGATAGACAAGCAGAGAAGGTCTATGTTGCAGTTGGGAATGATATACAAGATGGGTTTAAGACCTTGGAGTGGACACTGAAGAATTGGAATTCTCAGCCGATTTCCATAGTCATTCTTCATGTAGCTCACGACATTTCGAAGGATTTCGTCTACACCCCATTTGGGAAGCTCCCTGCAAGTTCTGTGAGTGATGAGAAATTGGAAGTTCTTATGAAATATGAGCAAGAACAGATTGATAAGTTGCTGCACAAGTACTTAGCATTCTGTGGCCAGGTGAAGGCTCAAATACTAACAGTGGAAAAATGTGAGCAACCAATTAATAAAATCATCATGGATTTGATCTTTAGACACCAAATAACCAGACTGGTTATGGGATTCACTTTCTTGAAGACTTCGTCAACTTGGAGAATAAAGAGTGCAGTAAGTGGAGCATTTTACATTCATCATCACAAGCCAGATTTCTGCGAATTGTTCGTGATATGTGGGGGAAGACTTGTTTTCCTTAGAGGAGAAAATAACAAAGGAATCATGGAGGATGATCAAGGTGTCATTGTTGCAAAACTGAGAGAAAAAGCCAGTTTCAAAGGTTGGCTAGCGAAAATGTTCAATGAAACCTCAGCAACTTCCCCAGATACAACTTCAGCAACTTCCTCAGATACGACTTCAGCAAATACCAACTCCCCAATTAGTTCACAGAACAATTGGGAATGCCATGTCCAAGAAATTGAAAATTATTTCCAGCATTTGTTATCCTTGAGATTGGAGGAAGAAGCTTGTGGGCAGGAGAATGTTGATGTTCAAAAAAATCCAATGGAATCTAACATGATTGCTGCAGAAGACATGAAAACAAAGCTAAAGGAAGCTCAAGAGACAATCAAGTTGAAAAGAAAGGCAGCCAAGGCCAATGTCGAAAGACAAACTAAAGCACAATGGGCCATTAGTCTATGCAATTCTCGGGCTGAAGAACTTGAAGCACAAATACAAGAAGAGGTGACTAACCGAGCAGAGTTAAAGAAAGCGCTAGACTCTGAAATGGAACAGCTTCATGAAGTTATAATGGACACTGGAGAGAGCAGAAGTAAGCTAAATTCACTAATGGAGCTCCAATTTGAGCTCTCAAATAAGCTCCAAATTTCCACATTGGCGAAATCAAATACCGAGTCCCAACTAGAGAAGGCCGTAAGCAGCCGGGCAGAGATGGTTAGGGAGATTGAGGAATTGCGGCAGCATAGAGATGTTCTACATCGTAGAATCGAGTTTTGTAAAGAAAAGGATGTCATTGGAATGGTTGGAAGGCTTACTGACACGAGCTGTGGATTCAAGAAGTACACAGCTGAGGAGATCAGATTGGCTACGAACAATTTTTCAGAACGTTTGAGAATTAAACCTGGAGGGGATTGGAACACTACTATGTATAGAGGGCGCATCAACCATGCCACGGTTGCAATCAAGATCCTCAACTTTGCTAAAGGAGACTCTAAGCAAGATTTTAAAGCTAAGGTTACAATTCTTAGCCACATGAGACACCCACATCTAGTAACAATGATTGGCTTCTGCACTGAGCTAAGGTGCATTGTGTTTGAATACATGCACAATGGTAGCTTGAGAGACATATTACTGAGGGATTTATTGTTCTCCTCCCACATAAGCTCTAAGAAAAGAAAGCGAACCCTAGGGTGGCATGACCGTATCCGTATTGCGATGGAGATTTGCTCGGGCCTGGGCTTTCTCCACACAGCTAAGCCCAGACCCATTGTTCACGGACGACTTTCCTTATCCAACATCCTCCTTGATCGGAACCTCGTCACGAAAATAAGTGGCTTTGGGCTCTCACGCACCCATAATGAACAAAGCATTAGATCAGACATTCGGGCTTTTGGGGTACTGATGATGCATCTTTTAACCGGAAGGAATTGGGCAGGACTAGGCCAGGCTGTGAATATGGACCGAGCAGCTGTGATTCGTGATTTAGATGAGATGGCTGGACATTGGCCTTTGGATTTGGCAGAGAAACTTGCCGGGTTAGCCTTGACTTGCTTGACAAGTAACCGTGGACCCAGTCGAGATCTGAGGCTGGCAACAGTGATGGAAGAGCTCAATGAGTTGAAGAGATATGGTGATGATATTGTGGCAAGAAGAAGATCTGAGGGGCTGATGGATGGAGATGTAGAAGAAAATGGCACCAGTGATGTACCTAGTTGTTTCCTCTGCCCCATTTCTCAGGAAGTGATGAAGAATCCACATGTGGCAGCCGATGGATTTTCGTATGAACTTGAGACCATAGAGGAATGGCTAGGAATGGGGCATGAAACATCGCCCATGACAAACCTTAGGCTAAAGCACACATTTCTTACCCCTAATCACACCCTCCGTTCCCTAATTCAAGATTGGCATAATAAGAGGTCCCTTCCACTACCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

808

Amino Acids

91.85

Weight (kDa)

7.63

Isoelectric Point (pI)

43.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 474 - 618 2.2e-26 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 478 - 619 1.1e-15 Protein kinase domain
U-box PF04564 732 - 802 1.6e-15 U-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1058
AccB1I GGYRCC 1 cut(s) 2183
AccI GTMKAC 1 cut(s) 153
AciI CCGC 1 cut(s) 1225
AclI AACGTT 1 cut(s) 1375
AclWI GGATC 1 cut(s) 1450
AcoI YGGCCR 1 cut(s) 271
AcsI RAATTY 3 cut(s) 91, 1090, 1134
AcuI CTGAAG 4 cut(s) 101, 627, 651, 984
AfaI GTAC 4 cut(s) 257, 1331, 1887, 2196
AfeI AGCGCT 1 cut(s) 1023
AfiI CCNNNNNNNGG 5 cut(s) 72, 165, 280, 1441, 1680
AflIII ACRYGT 1 cut(s) 2245
AjnI CCWGG 4 cut(s) 273, 1390, 1722, 1932
AloI GAACNNNNNNTCC 2 cut(s) 1619, 1651
Alw21I GWGCWC 3 cut(s) 1107, 1119, 2100
Alw26I GTCTC 5 cut(s) 866, 1470, 1519, 1605, 2273
AlwI GGATC 1 cut(s) 1450
Ama87I CYCGRG 2 cut(s) 957, 1717
Aor51HI AGCGCT 1 cut(s) 1023
AoxI GGCC 7 cut(s) 271, 903, 936, 1179, 1720, 1930, 1994
ApeKI GCWGC 7 cut(s) 247, 833, 896, 1188, 1228, 1955, 2252
ApoI RAATTY 3 cut(s) 91, 1090, 1134
ArsI GACNNNNNNTTYG 2 cut(s) 1148, 1180
AseI ATTAAT 1 cut(s) 321
Asp700I GAANNNNTTC 3 cut(s) 146, 605, 1044
AspA2I CCTAGG 1 cut(s) 1675
AspLEI GCGC 2 cut(s) 1024, 1428
AspS9I GGNCC 5 cut(s) 936, 1720, 1948, 2057, 2406
AsuC2I CCSGG 2 cut(s) 1193, 2023
AsuHPI GGTGA 3 cut(s) 289, 1006, 2132
AsuII TTCGAA 1 cut(s) 140
AsuNHI GCTAGC 1 cut(s) 595
AvaI CYCGRG 2 cut(s) 957, 1717
AvaII GGWCC 3 cut(s) 1948, 2057, 2406
AvrII CCTAGG 1 cut(s) 1675
AxyI CCTNAGG 1 cut(s) 2333
BalI TGGCCA 1 cut(s) 273
BanI GGYRCC 1 cut(s) 2183
BanII GRGCYC 4 cut(s) 1107, 1119, 1833, 2100
BarI GAAGNNNNNNTAC 2 cut(s) 966, 998
BauI CACGAG 1 cut(s) 1309
BbsI GAAGAC 3 cut(s) 398, 499, 846
Bbv12I GWGCWC 3 cut(s) 1107, 1119, 2100
BbvCI CCTCAGC 2 cut(s) 619, 1338
BbvI GCAGC 7 cut(s) 234, 820, 908, 1200, 1240, 1967, 2264
BccI CCATC 8 cut(s) 47, 1195, 1699, 1975, 2083, 2152, 2156, 2252
BceAI ACGGC 1 cut(s) 1166
BciT130I CCWGG 4 cut(s) 275, 1392, 1724, 1934
BciVI GTATCC 1 cut(s) 1703
BclI TGATCA 1 cut(s) 541
BcnI CCSGG 2 cut(s) 1193, 2023
BcoDI GTCTC 5 cut(s) 866, 1470, 1519, 1605, 2273
BfaI CTAG 8 cut(s) 596, 1025, 1172, 1538, 1676, 1928, 2199, 2297
BfmI CTRYAG 1 cut(s) 834
BfoI RGCGCY 1 cut(s) 1025
BfuI GTATCC 1 cut(s) 1703
BglII AGATCT 2 cut(s) 2068, 2144
BisI GCNGC 8 cut(s) 248, 834, 897, 1189, 1226, 1229, 1956, 2253
BlnI CCTAGG 1 cut(s) 1675
BlpI GCTNAGC 1 cut(s) 1743
BlsI GCNGC 8 cut(s) 249, 835, 898, 1190, 1227, 1230, 1957, 2254
BmcAI AGTACT 1 cut(s) 257
Bme1390I CCNGG 6 cut(s) 275, 1193, 1392, 1724, 1934, 2023
Bme18I GGWCC 3 cut(s) 1948, 2057, 2406
BmeT110I CYCGRG 2 cut(s) 957, 1717
BmgT120I GGNCC 5 cut(s) 936, 1720, 1948, 2057, 2406
BmiI GGNNCC 4 cut(s) 1802, 2059, 2185, 2408
BmrFI CCNGG 6 cut(s) 275, 1193, 1392, 1724, 1934, 2023
BmrI ACTGGG 1 cut(s) 2055
BmsI GCATC 3 cut(s) 1437, 1884, 1906
BmtI GCTAGC 1 cut(s) 599
BmuI ACTGGG 1 cut(s) 2055
BpiI GAAGAC 3 cut(s) 398, 499, 846
BplI GAGNNNNNCTC 2 cut(s) 1700, 1732
BpmI CTGGAG 2 cut(s) 1089, 1413
Bpu10I CCTNAGC 4 cut(s) 619, 1338, 1500, 1568
Bpu1102I GCTNAGC 1 cut(s) 1743
Bpu14I TTCGAA 1 cut(s) 140
BpuEI CTTGAG 4 cut(s) 778, 852, 1627, 2297
BpuMI CCSGG 2 cut(s) 1193, 2023
BsaI GGTCTC 1 cut(s) 2273
BsaJI CCNNGG 6 cut(s) 66, 900, 1440, 1675, 1723, 2053
BsaWI WCCGGW 1 cut(s) 1907
Bsc4I CCNNNNNNNGG 5 cut(s) 72, 165, 280, 1441, 1680
Bse1I ACTGG 5 cut(s) 372, 579, 1072, 2061, 2187
Bse21I CCTNAGG 1 cut(s) 2333
BseBI CCWGG 4 cut(s) 275, 1392, 1724, 1934
BseDI CCNNGG 6 cut(s) 66, 900, 1440, 1675, 1723, 2053
BseGI GGATG 4 cut(s) 544, 1282, 1785, 2167
BseLI CCNNNNNNNGG 5 cut(s) 72, 165, 280, 1441, 1680
BseNI ACTGG 5 cut(s) 372, 579, 1072, 2061, 2187
BseRI GAGGAG 3 cut(s) 525, 1355, 1630
BseXI GCAGC 7 cut(s) 234, 820, 908, 1200, 1240, 1967, 2264
BsgI GTGCAG 3 cut(s) 233, 441, 1543
BshFI GGCC 7 cut(s) 273, 905, 938, 1181, 1722, 1932, 1996
BshNI GGYRCC 1 cut(s) 2183
BsiHKAI GWGCWC 3 cut(s) 1107, 1119, 2100
BsiHKCI CYCGRG 2 cut(s) 957, 1717
BsiSI CCGG 3 cut(s) 1192, 1908, 2022
BslFI GGGAC 2 cut(s) 1150, 2392
BslI CCNNNNNNNGG 5 cut(s) 72, 165, 280, 1441, 1680
BsmAI GTCTC 5 cut(s) 866, 1470, 1519, 1605, 2273
BsmFI GGGAC 2 cut(s) 1150, 2392
BsmI GAATGC 2 cut(s) 263, 716
BsnI GGCC 7 cut(s) 273, 905, 938, 1181, 1722, 1932, 1996
Bso31I GGTCTC 1 cut(s) 2273
BsoBI CYCGRG 2 cut(s) 957, 1717
Bsp119I TTCGAA 1 cut(s) 140
Bsp1286I GDGCHC 4 cut(s) 1107, 1119, 1833, 2100
Bsp143I GATC 8 cut(s) 342, 541, 1344, 1455, 1795, 1862, 2068, 2144
Bsp1720I GCTNAGC 1 cut(s) 1743
BspACI CCGC 1 cut(s) 1225
BspANI GGCC 7 cut(s) 273, 905, 938, 1181, 1722, 1932, 1996
BspHI TCATGA 1 cut(s) 1048
BspLI GGNNCC 4 cut(s) 1802, 2059, 2185, 2408
BspMAI CTGCAG 1 cut(s) 838
BspOI GCTAGC 1 cut(s) 599
BspPI GGATC 1 cut(s) 1450
BspQI GCTCTTC 1 cut(s) 2088
BspT104I TTCGAA 1 cut(s) 140
BspT107I GGYRCC 1 cut(s) 2183
BspTNI GGTCTC 1 cut(s) 2273
BsrI ACTGG 5 cut(s) 372, 579, 1072, 2061, 2187
BssECI CCNNGG 6 cut(s) 66, 900, 1440, 1675, 1723, 2053
BssMI GATC 8 cut(s) 342, 541, 1344, 1455, 1795, 1862, 2068, 2144
BssSI CACGAG 1 cut(s) 1309
BssT1I CCWWGG 3 cut(s) 66, 900, 1675
Bst2BI CACGAG 1 cut(s) 1309
Bst2UI CCWGG 4 cut(s) 275, 1392, 1724, 1934
Bst4CI ACNGT 6 cut(s) 298, 1444, 1691, 2054, 2086, 2421
Bst6I CTCTTC 3 cut(s) 984, 2088, 2105
BstBI TTCGAA 1 cut(s) 140
BstC8I GCNNGC 2 cut(s) 597, 2079
BstDSI CCRYGG 2 cut(s) 1440, 2053
BstF5I GGATG 4 cut(s) 544, 1282, 1785, 2167
BstH2I RGCGCY 1 cut(s) 1025
BstHHI GCGC 2 cut(s) 1024, 1428
BstKTI GATC 8 cut(s) 345, 544, 1347, 1458, 1798, 1865, 2071, 2147
BstMAI GTCTC 5 cut(s) 866, 1470, 1519, 1605, 2273
BstMBI GATC 8 cut(s) 342, 541, 1344, 1455, 1795, 1862, 2068, 2144
BstMWI GCNNNNNNNGC 4 cut(s) 902, 935, 1445, 2027
BstNI CCWGG 4 cut(s) 275, 1392, 1724, 1934
BstNSI RCATGY 2 cut(s) 1594, 2249
BstSCI CCNGG 6 cut(s) 273, 1191, 1390, 1722, 1932, 2021
BstSFI CTRYAG 1 cut(s) 834
BstV1I GCAGC 7 cut(s) 234, 820, 908, 1200, 1240, 1967, 2264
BstV2I GAAGAC 3 cut(s) 398, 499, 846
BstX2I RGATCY 3 cut(s) 1455, 2068, 2144
BstYI RGATCY 3 cut(s) 1455, 2068, 2144
Bsu36I CCTNAGG 1 cut(s) 2333
BsuI GTATCC 1 cut(s) 1703
BsuRI GGCC 7 cut(s) 273, 905, 938, 1181, 1722, 1932, 1996
BtgI CCRYGG 2 cut(s) 1440, 2053
BtgZI GCGATG 2 cut(s) 1718, 2301
BtsCI GGATG 4 cut(s) 544, 1282, 1785, 2167
BtsIMutI CAGTG 6 cut(s) 77, 303, 1065, 1560, 2091, 2194
Cac8I GCNNGC 2 cut(s) 597, 2079
CciI TCATGA 1 cut(s) 1048
CfoI GCGC 2 cut(s) 1024, 1428
Cfr13I GGNCC 5 cut(s) 936, 1720, 1948, 2057, 2406
Csp6I GTAC 4 cut(s) 256, 1330, 1886, 2195
CviQI GTAC 4 cut(s) 256, 1330, 1886, 2195
DpnI GATC 8 cut(s) 344, 543, 1346, 1457, 1797, 1864, 2070, 2146
DpnII GATC 8 cut(s) 342, 541, 1344, 1455, 1795, 1862, 2068, 2144
DraI TTTAAA 1 cut(s) 1495
EaeI YGGCCR 1 cut(s) 271
Eam1104I CTCTTC 3 cut(s) 984, 2088, 2105
EarI CTCTTC 3 cut(s) 984, 2088, 2105
Ecl136II GAGCTC 3 cut(s) 1105, 1117, 2098
Eco130I CCWWGG 3 cut(s) 66, 900, 1675
Eco24I GRGCYC 4 cut(s) 1107, 1119, 1833, 2100
Eco31I GGTCTC 1 cut(s) 2273
Eco47I GGWCC 3 cut(s) 1948, 2057, 2406
Eco47III AGCGCT 1 cut(s) 1023
Eco53kI GAGCTC 3 cut(s) 1105, 1117, 2098
Eco57I CTGAAG 4 cut(s) 101, 627, 651, 984
Eco81I CCTNAGG 1 cut(s) 2333
Eco88I CYCGRG 2 cut(s) 957, 1717
EcoICRI GAGCTC 3 cut(s) 1105, 1117, 2098
EcoO109I RGGNCCY 1 cut(s) 2406
EcoRI GAATTC 1 cut(s) 91
EcoRII CCWGG 4 cut(s) 273, 1390, 1722, 1932
EcoT14I CCWWGG 3 cut(s) 66, 900, 1675
EcoT22I ATGCAT 1 cut(s) 1899
EcoT38I GRGCYC 4 cut(s) 1107, 1119, 1833, 2100
ErhI CCWWGG 3 cut(s) 66, 900, 1675
FaqI GGGAC 2 cut(s) 1150, 2392
FbaI TGATCA 1 cut(s) 541
FblI GTMKAC 1 cut(s) 153
Fnu4HI GCNGC 8 cut(s) 248, 834, 897, 1189, 1226, 1229, 1956, 2253
FokI GGATG 4 cut(s) 551, 1289, 1772, 2174
FriOI GRGCYC 4 cut(s) 1107, 1119, 1833, 2100
Fsp4HI GCNGC 8 cut(s) 248, 834, 897, 1189, 1226, 1229, 1956, 2253
FspBI CTAG 8 cut(s) 596, 1025, 1172, 1538, 1676, 1928, 2199, 2297
GlaI GCGC 2 cut(s) 1023, 1427
GluI GCNGC 8 cut(s) 248, 834, 897, 1189, 1226, 1229, 1956, 2253
GsuI CTGGAG 2 cut(s) 1089, 1413
HaeII RGCGCY 1 cut(s) 1025
HaeIII GGCC 7 cut(s) 273, 905, 938, 1181, 1722, 1932, 1996
HapII CCGG 3 cut(s) 1192, 1908, 2022
HhaI GCGC 2 cut(s) 1024, 1428
Hin6I GCGC 2 cut(s) 1022, 1426
HinP1I GCGC 2 cut(s) 1022, 1426
HincII GTYRAC 1 cut(s) 402
HindII GTYRAC 1 cut(s) 402
HindIII AAGCTT 1 cut(s) 774
HpaII CCGG 3 cut(s) 1192, 1908, 2022
HphI GGTGA 3 cut(s) 289, 1006, 2132
Hpy166II GTNNAC 7 cut(s) 75, 154, 402, 695, 1332, 1762, 2057
Hpy188I TCNGA 8 cut(s) 658, 1033, 1349, 1372, 1800, 1867, 2073, 2149
Hpy8I GTNNAC 7 cut(s) 75, 154, 402, 695, 1332, 1762, 2057
HpyAV CCTTC 7 cut(s) 13, 136, 274, 1171, 1290, 1905, 2420
HpyCH4III ACNGT 6 cut(s) 298, 1444, 1691, 2054, 2086, 2421
HpyCH4IV ACGT 1 cut(s) 1375
HpyF10VI GCNNNNNNNGC 4 cut(s) 902, 935, 1445, 2027
HpySE526I ACGT 1 cut(s) 1375
HspAI GCGC 2 cut(s) 1022, 1426
Ksp22I TGATCA 1 cut(s) 541
Kzo9I GATC 8 cut(s) 342, 541, 1344, 1455, 1795, 1862, 2068, 2144
LguI GCTCTTC 1 cut(s) 2088
LmnI GCTCC 5 cut(s) 177, 431, 1102, 1110, 1134
Lsp1109I GCAGC 7 cut(s) 234, 820, 908, 1200, 1240, 1967, 2264
LweI GCATC 3 cut(s) 1437, 1884, 1906
MaeI CTAG 8 cut(s) 596, 1025, 1172, 1538, 1676, 1928, 2199, 2297
MaeII ACGT 1 cut(s) 1375
MaeIII GTNAC 5 cut(s) 994, 1504, 1540, 1807, 2048
MalI GATC 8 cut(s) 344, 543, 1346, 1457, 1797, 1864, 2070, 2146
MboI GATC 8 cut(s) 342, 541, 1344, 1455, 1795, 1862, 2068, 2144
MfeI CAATTG 1 cut(s) 703
MflI RGATCY 3 cut(s) 1455, 2068, 2144
MhlI GDGCHC 4 cut(s) 1107, 1119, 1833, 2100
MlsI TGGCCA 1 cut(s) 273
MluNI TGGCCA 1 cut(s) 273
MlyI GAGTC 3 cut(s) 1022, 1172, 1472
MmeI TCCRAC 2 cut(s) 1273, 1806
Mox20I TGGCCA 1 cut(s) 273
Mph1103I ATGCAT 1 cut(s) 1899
MroXI GAANNNNTTC 3 cut(s) 146, 605, 1044
MscI TGGCCA 1 cut(s) 273
MseI TTAA 6 cut(s) 60, 321, 1013, 1386, 1494, 1904
MslI CAYNNNNRTG 3 cut(s) 1236, 1286, 1412
Msp20I TGGCCA 1 cut(s) 273
MspA1I CMGCKG 2 cut(s) 1337, 1958
MspI CCGG 3 cut(s) 1192, 1908, 2022
MspR9I CCNGG 6 cut(s) 275, 1193, 1392, 1724, 1934, 2023
MunI CAATTG 1 cut(s) 703
Mva1269I GAATGC 2 cut(s) 263, 716
MvaI CCWGG 4 cut(s) 275, 1392, 1724, 1934
MwoI GCNNNNNNNGC 4 cut(s) 902, 935, 1445, 2027
NciI CCSGG 2 cut(s) 1193, 2023
NdeII GATC 8 cut(s) 342, 541, 1344, 1455, 1795, 1862, 2068, 2144
NheI GCTAGC 1 cut(s) 595
NlaIV GGNNCC 4 cut(s) 1802, 2059, 2185, 2408
NmuCI GTSAC 2 cut(s) 994, 1807
NsiI ATGCAT 1 cut(s) 1899
NspI RCATGY 2 cut(s) 1594, 2249
NspV TTCGAA 1 cut(s) 140
PagI TCATGA 1 cut(s) 1048
PciI ACATGT 1 cut(s) 2245
PciSI GCTCTTC 1 cut(s) 2088
PctI GAATGC 2 cut(s) 263, 716
PdmI GAANNNNTTC 3 cut(s) 146, 605, 1044
PfeI GAWTC 7 cut(s) 378, 528, 818, 1254, 1320, 1963, 2239
PflFI GACNNNGTC 2 cut(s) 397, 2061
PkrI GCNGC 8 cut(s) 249, 835, 898, 1190, 1227, 1230, 1957, 2254
PleI GAGTC 3 cut(s) 1022, 1171, 1472
PpsI GAGTC 3 cut(s) 1022, 1171, 1472
PpuMI RGGWCCY 1 cut(s) 2406
PscI ACATGT 1 cut(s) 2245
PshBI ATTAAT 1 cut(s) 321
PsiI TTATAA 1 cut(s) 1058
Psp124BI GAGCTC 3 cut(s) 1107, 1119, 2100
Psp1406I AACGTT 1 cut(s) 1375
Psp5II RGGWCCY 1 cut(s) 2406
Psp6I CCWGG 4 cut(s) 273, 1390, 1722, 1932
PspGI CCWGG 4 cut(s) 273, 1390, 1722, 1932
PspN4I GGNNCC 4 cut(s) 1802, 2059, 2185, 2408
PspPI GGNCC 5 cut(s) 936, 1720, 1948, 2057, 2406
PspPPI RGGWCCY 1 cut(s) 2406
PstI CTGCAG 1 cut(s) 838
PsuI RGATCY 3 cut(s) 1455, 2068, 2144
PsyI GACNNNGTC 2 cut(s) 397, 2061
PvuII CAGCTG 2 cut(s) 1337, 1958
RsaI GTAC 4 cut(s) 257, 1331, 1887, 2196
RsaNI GTAC 4 cut(s) 256, 1330, 1886, 2195
RseI CAYNNNNRTG 3 cut(s) 1236, 1286, 1412
SacI GAGCTC 3 cut(s) 1107, 1119, 2100
SapI GCTCTTC 1 cut(s) 2088
SaqAI TTAA 6 cut(s) 60, 321, 1013, 1386, 1494, 1904
SatI GCNGC 8 cut(s) 248, 834, 897, 1189, 1226, 1229, 1956, 2253
Sau3AI GATC 8 cut(s) 342, 541, 1344, 1455, 1795, 1862, 2068, 2144
Sau96I GGNCC 5 cut(s) 936, 1720, 1948, 2057, 2406
ScaI AGTACT 1 cut(s) 257
SchI GAGTC 3 cut(s) 1022, 1172, 1472
ScrFI CCNGG 6 cut(s) 275, 1193, 1392, 1724, 1934, 2023
SduI GDGCHC 4 cut(s) 1107, 1119, 1833, 2100
SfaNI GCATC 3 cut(s) 1437, 1884, 1906
SfcI CTRYAG 1 cut(s) 834
SfuI TTCGAA 1 cut(s) 140
SinI GGWCC 3 cut(s) 1948, 2057, 2406
SmiMI CAYNNNNRTG 3 cut(s) 1236, 1286, 1412
SmlI CTYRAG 4 cut(s) 757, 867, 1606, 2276
SmoI CTYRAG 4 cut(s) 757, 867, 1606, 2276
SsiI CCGC 1 cut(s) 1225
SspMI CTAG 8 cut(s) 596, 1025, 1172, 1538, 1676, 1928, 2199, 2297
SstI GAGCTC 3 cut(s) 1107, 1119, 2100
StyD4I CCNGG 6 cut(s) 273, 1191, 1390, 1722, 1932, 2021
StyI CCWWGG 3 cut(s) 66, 900, 1675
TaaI ACNGT 6 cut(s) 298, 1444, 1691, 2054, 2086, 2421
TaiI ACGT 1 cut(s) 1378
TaqI TCGA 4 cut(s) 140, 912, 1257, 2065
TaqII GACCGA 1 cut(s) 1965
TatI WGTACW 2 cut(s) 255, 1329
TauI GCSGC 1 cut(s) 1228
TfiI GAWTC 7 cut(s) 378, 528, 818, 1254, 1320, 1963, 2239
Tru1I TTAA 6 cut(s) 60, 321, 1013, 1386, 1494, 1904
Tru9I TTAA 6 cut(s) 60, 321, 1013, 1386, 1494, 1904
TscAI CASTG 6 cut(s) 84, 303, 1072, 1567, 2091, 2194
TseFI GTSAC 2 cut(s) 994, 1807
TseI GCWGC 7 cut(s) 247, 833, 896, 1188, 1228, 1955, 2252
Tsp45I GTSAC 2 cut(s) 994, 1807
TspGWI ACGGA 3 cut(s) 1685, 1779, 2363
TspRI CASTG 6 cut(s) 84, 303, 1072, 1567, 2091, 2194
Tth111I GACNNNGTC 2 cut(s) 397, 2061
VpaK11BI GGWCC 3 cut(s) 1948, 2057, 2406
VspI ATTAAT 1 cut(s) 321
XapI RAATTY 3 cut(s) 91, 1090, 1134
XceI RCATGY 2 cut(s) 1594, 2249
XcmI CCANNNNNNNNNTGG 1 cut(s) 370
XmaJI CCTAGG 1 cut(s) 1675
XmiI GTMKAC 1 cut(s) 153
XmnI GAANNNNTTC 3 cut(s) 146, 605, 1044
XspI CTAG 8 cut(s) 596, 1025, 1172, 1538, 1676, 1928, 2199, 2297
ZrmI AGTACT 1 cut(s) 257
Zsp2I ATGCAT 1 cut(s) 1899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.